Rh7BG194700

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
15850674 .. 15852632
1959 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG194700.1

Sequence Viewer

Length: 1362 bp
ATGGGGTCATCACTGTGGGTTACTAGCAATCATGACAAAGGGGAAAACCTTCCAGCAATTTCCATACTCTTGTTCATGGTGTTTACTCTGCTCTGGTTCTTATGGATTTGGAAGAAACCGAATAGGAACCCTACACCTCCATTGCCACCAGGCCCTCGTGGTCTGCCGCTACTCGGATATCTTCCATTTCTTGGTACAAACCTCCACCTAGAATTCACAGACATGGCAAGGGTTTATGGCCCAATTTACAAACTCCAACTTGGTACCAAGTTGTGCATTGTGGTGAGCTCACCTAAGCTTGTGAAACAAGTGGTTCGTGACCATGACACAACATTTTCCAACCGTGACCCTACAATTGCTGCTCTAGTGGGGTCATATGGAGCATCCGACATTGCATTTGGATCGTATGGTTCAGATTGGAGGAAGCTGCGCAAGGTGTTTGTGAGTCAGATGCTAAGCAAAATCAATCTTGATGATGGCTATGCTCTGAGAAAAGAGGAGGTGCACAAGTCGATCAGTCATATTTATCATGACAAAATTGGAACCCAAACTGATTTGGGCGAGTTTGCATTCTCCACAGTAATCAACGCAACTTTGCGTATGCTATGGGGTGCAACTCTACAAGGGACTGATTTTAGTGAAGACTATAGGAAATTGGTGGCAGAAATTGTAGATCTATTTGCGAAACCAAACATTTCGGACTATTTTCCTGTGCTTGCAAGGTTTGACATACAAGGAATTGAGAGGCAAGCAAAGAAAGTTCAATCCGCAATTGACAAGATTCTAAGTTGTGCCATAGAAGAACGGATGAAGAAGCTGGCCTCAGCCAAAAATGGGGGAGTACAACAAAAACATGAGAGGAAGGACTTTCTGCAGTTCCTCTTGGAGAACAATCATAATCATGAAGATGGTTCAACATCCTTTACAGGGCAACAACTGAAGGCCTTGCTCATGGATATCGTGGTGGGTGGAACTGACACTACGGCAACAACAGTGGAATGGGTTCTTACTGAGCTGATGCAGCACCCAGAAGAAATGATAAGAGTTCAAGAAGAACTGACACAAATTGTGGGTTTGAACAACTTGGTTGAAGAGTTTCATTTGCCAAAATTACATCACCTAGATGCTGTGATCAAGGAGACATTTCGCTTGCACCCTGCACTGCCCCTTCTAGTGCCCCGGCGTTCAAGCCAACCTACCACCATTGGTGGCTATTACATACCAAAAGGTTCCATTGTGTTTCTCAATGCTTGGGCCATACACAGAGATCCAAGTGTTTGGGACGATCCCTTGGAATTTAGACCCCAGAGACAATACACCAAGTCAGATGATAAGCTACTTGATTACAGGTTCTGTCCCTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

453

Amino Acids

51.46

Weight (kDa)

7.27

Isoelectric Point (pI)

33.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 49 - 453 2.3e-86 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000490)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10240 FvH4_5g00571 FvH4_5g00571 FvH4_5g00571 FvH4_5g00572 FvH4_5g00572 FvH4_5g00572 FvH4_5g00573 FvH4_5g37440 FvH4_5g37450
prunus_persica Prupe.5G078400_v2.0.a1 Prupe.5G078500_v2.0.a1 Prupe.5G078600_v2.0.a1 Prupe.5G078800_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0419931 RchiOBHm_Chr4g0419951 RchiOBHm_Chr4g0420051 RchiOBHm_Chr7g0201681 RchiOBHm_Chr7g0201771 RchiOBHm_Chr7g0201781 RchiOBHm_Chr7g0201791 RchiOBHm_Chr7g0225701 RchiOBHm_Chr7g0225731 RchiOBHm_Chr7g0225761 RchiOBHm_Chr7g0225791 RchiOBHm_Chr7g0225861
rosa_laevigata RLG00000001786 RLG00000001795 RLG00000003649 RLG00000003650 RLG00000003651 RLG00000003652 RLG00000003655 RLG00000003656 RLG00000003657
rosa_multiflora Rmu_sc0001030.1_g000001 Rmu_sc0001030.1_g000005 Rmu_sc0001030.1_g000006 Rmu_sc0006133.1_g000002 Rmu_sc0006637.1_g000005 Rmu_sc0012416.1_g000003 Rmu_sc0016902.1_g000001 Rmu_sc0025481.1_g000003
rosa_roxburghii Rroxscaffold_3G00233490 Rroxscaffold_3G00233550 Rroxscaffold_3G00233560 Rroxscaffold_3G00255100 Rroxscaffold_3G00255110
rosa_rugosa Rorug07G0065300 Rorug07G0065400 Rorug07G0065500 Rorug07G0065600 Rorug07G0065600 Rorug07G0065600 Rorug07G0065700 Rorug07G0065800 Rorug07G0065900 Rorug07G0232900
rosa_samantha Rh3AG071400 Rh3BG286400 Rh3CG072700 Rh4BG225100 Rh4CG235600 Rh5CG585000 Rh7AG192600 Rh7AG193000 Rh7AG193100 Rh7AG193300 Rh7AG371100 Rh7AG387700 Rh7BG194700 Rh7BG194900 Rh7BG195000 Rh7BG366600 Rh7CG203800 Rh7CG204000 Rh7CG204300 Rh7CG389700 Rh7CG407300 Rh7DG198100 Rh7DG198900 Rh7DG199100 Rh7DG377600
rosa_wichuraiana Rw0G020990 Rw7G016880 Rw7G016890 Rw7G028030 Rw7G031840 Rw7G031890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 431
Acc65I GGTACC 1 cut(s) 263
AccB1I GGYRCC 1 cut(s) 263
AccB7I CCANNNNNTGG 1 cut(s) 191
AciI CCGC 2 cut(s) 167, 768
AclWI GGATC 3 cut(s) 409, 1262, 1280
AcsI RAATTY 2 cut(s) 212, 1295
AcuI CTGAAG 1 cut(s) 959
AfaI GTAC 3 cut(s) 196, 265, 843
AfiI CCNNNNNNNGG 4 cut(s) 173, 191, 834, 927
AgsI TTSAA 6 cut(s) 764, 915, 1049, 1078, 1091, 1188
AjnI CCWGG 1 cut(s) 148
AluBI AGCT 6 cut(s) 288, 298, 427, 817, 1015, 1336
AluI AGCT 6 cut(s) 288, 298, 427, 817, 1015, 1336
Alw21I GWGCWC 2 cut(s) 290, 507
Alw26I GTCTC 2 cut(s) 1133, 1303
Alw44I GTGCAC 1 cut(s) 503
AlwI GGATC 3 cut(s) 409, 1262, 1280
AlwNI CAGNNNCTG 1 cut(s) 1353
AoxI GGCC 5 cut(s) 151, 238, 819, 942, 1254
ApaLI GTGCAC 1 cut(s) 503
ApeKI GCWGC 3 cut(s) 359, 427, 1021
ApoI RAATTY 2 cut(s) 212, 1295
ArsI GACNNNNNNTTYG 2 cut(s) 380, 412
Asp700I GAANNNNTTC 3 cut(s) 48, 1002, 1095
Asp718I GGTACC 1 cut(s) 263
AspLEI GCGC 1 cut(s) 432
AspS9I GGNCC 3 cut(s) 152, 239, 1254
AsuC2I CCSGG 1 cut(s) 1180
AsuHPI GGTGA 3 cut(s) 282, 295, 1109
BaeGI GKGCMC 2 cut(s) 507, 1179
BanI GGYRCC 1 cut(s) 263
BanII GRGCYC 1 cut(s) 290
BauI CACGAG 1 cut(s) 156
BbsI GAAGAC 1 cut(s) 648
Bbv12I GWGCWC 2 cut(s) 290, 507
BbvCI CCTCAGC 1 cut(s) 823
BbvI GCAGC 3 cut(s) 346, 414, 1033
BccI CCATC 2 cut(s) 470, 902
BceAI ACGGC 1 cut(s) 999
BcgI CGANNNNNNTGC 2 cut(s) 384, 418
BciT130I CCWGG 1 cut(s) 150
BclI TGATCA 1 cut(s) 1131
BcnI CCSGG 1 cut(s) 1180
BcoDI GTCTC 2 cut(s) 1133, 1303
BfaI CTAG 5 cut(s) 24, 209, 365, 1121, 1172
BfmI CTRYAG 2 cut(s) 646, 872
BglII AGATCT 1 cut(s) 673
BisI GCNGC 4 cut(s) 167, 360, 428, 1022
BlpI GCTNAGC 1 cut(s) 455
BlsI GCNGC 4 cut(s) 168, 361, 429, 1023
Bme1390I CCNGG 2 cut(s) 150, 1180
BmgT120I GGNCC 3 cut(s) 152, 239, 1254
BmiI GGNNCC 4 cut(s) 128, 265, 544, 1231
BmrFI CCNGG 2 cut(s) 150, 1180
BmsI GCATC 4 cut(s) 392, 441, 1008, 1114
BpiI GAAGAC 1 cut(s) 648
Bpu10I CCTNAGC 2 cut(s) 294, 823
Bpu1102I GCTNAGC 1 cut(s) 455
BpuMI CCSGG 1 cut(s) 1180
BsaJI CCNNGG 2 cut(s) 1178, 1290
Bsc4I CCNNNNNNNGG 4 cut(s) 173, 191, 834, 927
Bse3DI GCAATG 2 cut(s) 140, 390
BseBI CCWGG 1 cut(s) 150
BseDI CCNNGG 2 cut(s) 1178, 1290
BseGI GGATG 3 cut(s) 383, 813, 917
BseLI CCNNNNNNNGG 4 cut(s) 173, 191, 834, 927
BseMI GCAATG 2 cut(s) 140, 390
BseMII CTCAG 3 cut(s) 479, 837, 1002
BseRI GAGGAG 1 cut(s) 512
BseSI GKGCMC 2 cut(s) 507, 1179
BseXI GCAGC 3 cut(s) 346, 414, 1033
BsgI GTGCAG 1 cut(s) 1143
BshFI GGCC 5 cut(s) 153, 240, 821, 944, 1256
BshNI GGYRCC 1 cut(s) 263
BsiHKAI GWGCWC 2 cut(s) 290, 507
BsiSI CCGG 1 cut(s) 1180
BslFI GGGAC 3 cut(s) 640, 1295, 1341
BslI CCNNNNNNNGG 4 cut(s) 173, 191, 834, 927
BsmAI GTCTC 2 cut(s) 1133, 1303
BsmFI GGGAC 3 cut(s) 640, 1295, 1341
BsmI GAATGC 1 cut(s) 569
BsnI GGCC 5 cut(s) 153, 240, 821, 944, 1256
Bsp1286I GDGCHC 3 cut(s) 290, 507, 1179
Bsp143I GATC 6 cut(s) 401, 513, 673, 1131, 1267, 1285
Bsp1720I GCTNAGC 1 cut(s) 455
BspACI CCGC 2 cut(s) 167, 768
BspANI GGCC 5 cut(s) 153, 240, 821, 944, 1256
BspCNI CTCAG 3 cut(s) 480, 836, 1003
BspHI TCATGA 3 cut(s) 31, 529, 901
BspLI GGNNCC 4 cut(s) 128, 265, 544, 1231
BspMAI CTGCAG 1 cut(s) 876
BspPI GGATC 3 cut(s) 409, 1262, 1280
BspT107I GGYRCC 1 cut(s) 263
BsrDI GCAATG 2 cut(s) 140, 390
BssECI CCNNGG 2 cut(s) 1178, 1290
BssMI GATC 6 cut(s) 401, 513, 673, 1131, 1267, 1285
BssSI CACGAG 1 cut(s) 156
BssT1I CCWWGG 1 cut(s) 1290
Bst2BI CACGAG 1 cut(s) 156
Bst2UI CCWGG 1 cut(s) 150
Bst4CI ACNGT 4 cut(s) 15, 344, 580, 994
Bst6I CTCTTC 1 cut(s) 1086
BstC8I GCNNGC 4 cut(s) 717, 750, 819, 1151
BstDEI CTNAG 6 cut(s) 294, 455, 488, 785, 823, 1011
BstF5I GGATG 3 cut(s) 383, 813, 917
BstHHI GCGC 1 cut(s) 432
BstKTI GATC 6 cut(s) 404, 516, 676, 1134, 1270, 1288
BstMAI GTCTC 2 cut(s) 1133, 1303
BstMBI GATC 6 cut(s) 401, 513, 673, 1131, 1267, 1285
BstMWI GCNNNNNNNGC 1 cut(s) 1021
BstNI CCWGG 1 cut(s) 150
BstSCI CCNGG 2 cut(s) 148, 1178
BstSFI CTRYAG 2 cut(s) 646, 872
BstSLI GKGCMC 2 cut(s) 507, 1179
BstV1I GCAGC 3 cut(s) 346, 414, 1033
BstV2I GAAGAC 1 cut(s) 648
BstX2I RGATCY 2 cut(s) 673, 1267
BstXI CCANNNNNNTGG 1 cut(s) 1278
BstYI RGATCY 2 cut(s) 673, 1267
BsuRI GGCC 5 cut(s) 153, 240, 821, 944, 1256
BtsCI GGATG 3 cut(s) 383, 813, 917
BtsI GCAGTG 1 cut(s) 1160
BtsIMutI CAGTG 3 cut(s) 11, 999, 1160
Cac8I GCNNGC 4 cut(s) 717, 750, 819, 1151
CaiI CAGNNNCTG 1 cut(s) 1353
CciI TCATGA 3 cut(s) 31, 529, 901
CfoI GCGC 1 cut(s) 432
Cfr13I GGNCC 3 cut(s) 152, 239, 1254
Csp6I GTAC 3 cut(s) 195, 264, 842
CspCI CAANNNNNGTGG 2 cut(s) 975, 1010
CviAII CATG 8 cut(s) 32, 76, 223, 323, 530, 854, 902, 952
CviQI GTAC 3 cut(s) 195, 264, 842
DdeI CTNAG 6 cut(s) 294, 455, 488, 785, 823, 1011
DpnI GATC 6 cut(s) 403, 515, 675, 1133, 1269, 1287
DpnII GATC 6 cut(s) 401, 513, 673, 1131, 1267, 1285
Eam1104I CTCTTC 1 cut(s) 1086
EarI CTCTTC 1 cut(s) 1086
Ecl136II GAGCTC 1 cut(s) 288
Eco130I CCWWGG 1 cut(s) 1290
Eco147I AGGCCT 1 cut(s) 944
Eco24I GRGCYC 1 cut(s) 290
Eco32I GATATC 2 cut(s) 179, 958
Eco53kI GAGCTC 1 cut(s) 288
Eco57I CTGAAG 1 cut(s) 959
EcoICRI GAGCTC 1 cut(s) 288
EcoO109I RGGNCCY 1 cut(s) 152
EcoRI GAATTC 1 cut(s) 212
EcoRII CCWGG 1 cut(s) 148
EcoRV GATATC 2 cut(s) 179, 958
EcoT14I CCWWGG 1 cut(s) 1290
EcoT38I GRGCYC 1 cut(s) 290
ErhI CCWWGG 1 cut(s) 1290
FaeI CATG 8 cut(s) 35, 79, 226, 326, 533, 857, 905, 955
FaqI GGGAC 3 cut(s) 640, 1295, 1341
FatI CATG 8 cut(s) 31, 75, 222, 322, 529, 853, 901, 951
FauNDI CATATG 1 cut(s) 376
FbaI TGATCA 1 cut(s) 1131
Fnu4HI GCNGC 4 cut(s) 167, 360, 428, 1022
FokI GGATG 3 cut(s) 370, 820, 904
FriOI GRGCYC 1 cut(s) 290
Fsp4HI GCNGC 4 cut(s) 167, 360, 428, 1022
FspBI CTAG 5 cut(s) 24, 209, 365, 1121, 1172
FspI TGCGCA 1 cut(s) 431
GlaI GCGC 1 cut(s) 431
GluI GCNGC 4 cut(s) 167, 360, 428, 1022
HaeIII GGCC 5 cut(s) 153, 240, 821, 944, 1256
HapII CCGG 1 cut(s) 1180
HhaI GCGC 1 cut(s) 432
Hin1II CATG 8 cut(s) 35, 79, 226, 326, 533, 857, 905, 955
Hin6I GCGC 1 cut(s) 430
HinP1I GCGC 1 cut(s) 430
HindIII AAGCTT 1 cut(s) 296
HinfI GANTC 2 cut(s) 445, 781
HpaII CCGG 1 cut(s) 1180
HphI GGTGA 3 cut(s) 282, 295, 1109
Hpy166II GTNNAC 2 cut(s) 84, 505
Hpy188I TCNGA 7 cut(s) 176, 388, 415, 450, 489, 700, 1327
Hpy188III TCNNGA 6 cut(s) 32, 317, 470, 530, 902, 1049
Hpy8I GTNNAC 2 cut(s) 84, 505
HpyAV CCTTC 4 cut(s) 59, 856, 934, 1178
HpyCH4III ACNGT 4 cut(s) 15, 344, 580, 994
HpyF10VI GCNNNNNNNGC 1 cut(s) 1021
HpyF3I CTNAG 6 cut(s) 294, 455, 488, 785, 823, 1011
Hsp92II CATG 8 cut(s) 35, 79, 226, 326, 533, 857, 905, 955
HspAI GCGC 1 cut(s) 430
KpnI GGTACC 1 cut(s) 267
Ksp22I TGATCA 1 cut(s) 1131
Kzo9I GATC 6 cut(s) 401, 513, 673, 1131, 1267, 1285
LmnI GCTCC 1 cut(s) 380
Lsp1109I GCAGC 3 cut(s) 346, 414, 1033
LweI GCATC 4 cut(s) 392, 441, 1008, 1114
MaeI CTAG 5 cut(s) 24, 209, 365, 1121, 1172
MaeIII GTNAC 3 cut(s) 19, 317, 344
MalI GATC 6 cut(s) 403, 515, 675, 1133, 1269, 1287
MboI GATC 6 cut(s) 401, 513, 673, 1131, 1267, 1285
MboII GAAGA 9 cut(s) 124, 173, 653, 812, 823, 917, 1043, 1064, 1103
MfeI CAATTG 2 cut(s) 354, 771
MflI RGATCY 2 cut(s) 673, 1267
MhlI GDGCHC 3 cut(s) 290, 507, 1179
MlyI GAGTC 1 cut(s) 454
MmeI TCCRAC 3 cut(s) 280, 363, 411
MroXI GAANNNNTTC 3 cut(s) 48, 1002, 1095
MslI CAYNNNNRTG 6 cut(s) 13, 221, 281, 900, 906, 1122
MspI CCGG 1 cut(s) 1180
MspR9I CCNGG 2 cut(s) 150, 1180
MunI CAATTG 2 cut(s) 354, 771
Mva1269I GAATGC 1 cut(s) 569
MvaI CCWGG 1 cut(s) 150
MwoI GCNNNNNNNGC 1 cut(s) 1021
NciI CCSGG 1 cut(s) 1180
NdeI CATATG 1 cut(s) 376
NdeII GATC 6 cut(s) 401, 513, 673, 1131, 1267, 1285
NlaIII CATG 8 cut(s) 35, 79, 226, 326, 533, 857, 905, 955
NlaIV GGNNCC 4 cut(s) 128, 265, 544, 1231
NmuCI GTSAC 2 cut(s) 317, 344
NsbI TGCGCA 1 cut(s) 431
PagI TCATGA 3 cut(s) 31, 529, 901
PceI AGGCCT 1 cut(s) 944
PctI GAATGC 1 cut(s) 569
PdmI GAANNNNTTC 3 cut(s) 48, 1002, 1095
PfeI GAWTC 1 cut(s) 781
PflMI CCANNNNNTGG 1 cut(s) 191
PkrI GCNGC 4 cut(s) 168, 361, 429, 1023
PleI GAGTC 1 cut(s) 453
PpsI GAGTC 1 cut(s) 453
Psp124BI GAGCTC 1 cut(s) 290
Psp6I CCWGG 1 cut(s) 148
PspGI CCWGG 1 cut(s) 148
PspN4I GGNNCC 4 cut(s) 128, 265, 544, 1231
PspPI GGNCC 3 cut(s) 152, 239, 1254
PsrI GAACNNNNNNTAC 2 cut(s) 964, 996
PstI CTGCAG 1 cut(s) 876
PstNI CAGNNNCTG 1 cut(s) 1353
PsuI RGATCY 2 cut(s) 673, 1267
RsaI GTAC 3 cut(s) 196, 265, 843
RsaNI GTAC 3 cut(s) 195, 264, 842
RseI CAYNNNNRTG 6 cut(s) 13, 221, 281, 900, 906, 1122
SacI GAGCTC 1 cut(s) 290
SatI GCNGC 4 cut(s) 167, 360, 428, 1022
Sau3AI GATC 6 cut(s) 401, 513, 673, 1131, 1267, 1285
Sau96I GGNCC 3 cut(s) 152, 239, 1254
SchI GAGTC 1 cut(s) 454
ScrFI CCNGG 2 cut(s) 150, 1180
SduI GDGCHC 3 cut(s) 290, 507, 1179
SfaNI GCATC 4 cut(s) 392, 441, 1008, 1114
SfcI CTRYAG 2 cut(s) 646, 872
SmiMI CAYNNNNRTG 6 cut(s) 13, 221, 281, 900, 906, 1122
SseBI AGGCCT 1 cut(s) 944
SsiI CCGC 2 cut(s) 167, 768
SspMI CTAG 5 cut(s) 24, 209, 365, 1121, 1172
SstI GAGCTC 1 cut(s) 290
StuI AGGCCT 1 cut(s) 944
StyD4I CCNGG 2 cut(s) 148, 1178
StyI CCWWGG 1 cut(s) 1290
TaaI ACNGT 4 cut(s) 15, 344, 580, 994
TaqI TCGA 1 cut(s) 512
TatI WGTACW 1 cut(s) 841
TauI GCSGC 1 cut(s) 169
TfiI GAWTC 1 cut(s) 781
TscAI CASTG 3 cut(s) 18, 999, 1167
TseFI GTSAC 2 cut(s) 317, 344
TseI GCWGC 3 cut(s) 359, 427, 1021
Tsp45I GTSAC 2 cut(s) 317, 344
TspDTI ATGAA 4 cut(s) 64, 824, 918, 1088
TspGWI ACGGA 1 cut(s) 820
TspRI CASTG 3 cut(s) 18, 999, 1167
Van91I CCANNNNNTGG 1 cut(s) 191
VneI GTGCAC 1 cut(s) 503
XapI RAATTY 2 cut(s) 212, 1295
XmnI GAANNNNTTC 3 cut(s) 48, 1002, 1095
XspI CTAG 5 cut(s) 24, 209, 365, 1121, 1172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.