Rmu_sc0006133.1_g000002

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006133.1
Physical Location & Seq
Reverse (-)
6514 .. 9987
3474 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006133.1_g000002.1.cds

Sequence Viewer

Length: 1191 bp
atgaccgccacgtgcgagacaatctccgccagcggaacttctccgtttcatctagcatgtgagatagtctcctctaagctcaactccgctagcggaacttctccctttcatctggcaagggagacaatatccgctaagcgcaactccgctagcagaacttctccctttcatctggcaagcgagacagtctcttctaagcgaaactcggctagcgggacttctccctttcatcttgcaagcgtgacagtctccgctaagcgcaactctgctagcgggacttctccctttcttctggcaagcgagatggtctccgctaaaagcaactccgctagtgggacttctccctttcatctggcaagcgagatagtctccgctaagcacaactccgctagcagaacttctccctttcatctgccaagtgagacagtctctgctaagcgcaactccgctagcgggacttctcccttttatcttgcaagtgagatagtctccgctaagtgcaacaccgctagagggattcttccctttcatcttgaaagcaacagtctccgctgcaaccaagcaggtccccgcgacacttcttgccgtttactatcagcggagggcctgacaacgatcgccacacagcgttacagtcatgttacttccctccgggacaaggggacatgtcaacacgcagctcccctcaacaaacaatacaccgaccaaaaggagatctatcttagccggggagtggaggactccctggggggcctagcatgggcccacccgaaagggtataaagagtttgctcaccaatcctccaccgttggtggctatcacattcctaaaggttccagggtttttctgaatgtttggtccattcatagagaacctagtgtttgggacaatcccttagaatttagacctgggagattcccaaacaccgaccccaacaactgctttgattacttgggcaataagtttcagtatcttccgtttggttcttggagaagaatctgtgctgggattcccttggccgggaggatgttaatctatttgttggcttcattcttgcactcattcgagtggaggttgcctgaggatacaaaggttgacctttcggacaaattcaggtttgtgactaagaaggtgactccattgattgctataccaatgctcaggttaactaaattggagctctatgcttag
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

396

Amino Acids

43.25

Weight (kDa)

9.6

Isoelectric Point (pI)

44.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000490)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10240 FvH4_5g00571 FvH4_5g00571 FvH4_5g00571 FvH4_5g00572 FvH4_5g00572 FvH4_5g00572 FvH4_5g00573 FvH4_5g37440 FvH4_5g37450
prunus_persica Prupe.5G078400_v2.0.a1 Prupe.5G078500_v2.0.a1 Prupe.5G078600_v2.0.a1 Prupe.5G078800_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0419931 RchiOBHm_Chr4g0419951 RchiOBHm_Chr4g0420051 RchiOBHm_Chr7g0201681 RchiOBHm_Chr7g0201771 RchiOBHm_Chr7g0201781 RchiOBHm_Chr7g0201791 RchiOBHm_Chr7g0225701 RchiOBHm_Chr7g0225731 RchiOBHm_Chr7g0225761 RchiOBHm_Chr7g0225791 RchiOBHm_Chr7g0225861
rosa_laevigata RLG00000001786 RLG00000001795 RLG00000003649 RLG00000003650 RLG00000003651 RLG00000003652 RLG00000003655 RLG00000003656 RLG00000003657
rosa_multiflora Rmu_sc0001030.1_g000001 Rmu_sc0001030.1_g000005 Rmu_sc0001030.1_g000006 Rmu_sc0006133.1_g000002 Rmu_sc0006637.1_g000005 Rmu_sc0012416.1_g000003 Rmu_sc0016902.1_g000001 Rmu_sc0025481.1_g000003
rosa_roxburghii Rroxscaffold_3G00233490 Rroxscaffold_3G00233550 Rroxscaffold_3G00233560 Rroxscaffold_3G00255100 Rroxscaffold_3G00255110
rosa_rugosa Rorug07G0065300 Rorug07G0065400 Rorug07G0065500 Rorug07G0065600 Rorug07G0065600 Rorug07G0065600 Rorug07G0065700 Rorug07G0065800 Rorug07G0065900 Rorug07G0232900
rosa_samantha Rh3AG071400 Rh3BG286400 Rh3CG072700 Rh4BG225100 Rh4CG235600 Rh5CG585000 Rh7AG192600 Rh7AG193000 Rh7AG193100 Rh7AG193300 Rh7AG371100 Rh7AG387700 Rh7BG194700 Rh7BG194900 Rh7BG195000 Rh7BG366600 Rh7CG203800 Rh7CG204000 Rh7CG204300 Rh7CG389700 Rh7CG407300 Rh7DG198100 Rh7DG198900 Rh7DG199100 Rh7DG377600
rosa_wichuraiana Rw0G020990 Rw7G016880 Rw7G016890 Rw7G028030 Rw7G031840 Rw7G031890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 554
AccII CGCG 1 cut(s) 573
AcoI YGGCCR 1 cut(s) 1017
AcsI RAATTY 2 cut(s) 899, 1109
AcvI CACGTG 1 cut(s) 12
AfiI CCNNNNNNNGG 8 cut(s) 333, 453, 513, 658, 733, 760, 1019, 1020
AflIII ACRYGT 1 cut(s) 665
AgsI TTSAA 1 cut(s) 536
AjnI CCWGG 3 cut(s) 744, 836, 907
AluBI AGCT 3 cut(s) 79, 680, 1180
AluI AGCT 3 cut(s) 79, 680, 1180
Alw21I GWGCWC 1 cut(s) 1182
AlwNI CAGNNNCTG 1 cut(s) 431
AoxI GGCC 4 cut(s) 604, 751, 762, 1017
ApaI GGGCCC 1 cut(s) 766
ApeKI GCWGC 2 cut(s) 552, 677
ApoI RAATTY 2 cut(s) 899, 1109
AspLEI GCGC 3 cut(s) 141, 261, 441
AspS9I GGNCC 6 cut(s) 566, 604, 751, 762, 763, 858
AsuC2I CCSGG 3 cut(s) 653, 728, 1021
AsuHPI GGTGA 2 cut(s) 785, 1144
AsuNHI GCTAGC 6 cut(s) 89, 149, 209, 269, 389, 449
AvaII GGWCC 2 cut(s) 566, 858
AxyI CCTNAGG 1 cut(s) 1080
BaeGI GKGCMC 1 cut(s) 766
BaeI ACNNNNGTAYC 2 cut(s) 1077, 1110
BanII GRGCYC 2 cut(s) 766, 1182
BbrPI CACGTG 1 cut(s) 12
Bbv12I GWGCWC 1 cut(s) 1182
BbvI GCAGC 2 cut(s) 539, 689
BccI CCATC 1 cut(s) 298
BceAI ACGGC 1 cut(s) 570
BciT130I CCWGG 3 cut(s) 746, 838, 909
BciVI GTATCC 1 cut(s) 1078
BcnI CCSGG 3 cut(s) 653, 728, 1021
BfuAI ACCTGC 1 cut(s) 554
BfuI GTATCC 1 cut(s) 1078
BglII AGATCT 1 cut(s) 714
BisI GCNGC 2 cut(s) 553, 678
BlpI GCTNAGC 4 cut(s) 135, 255, 375, 435
BlsI GCNGC 2 cut(s) 554, 679
Bme1390I CCNGG 6 cut(s) 653, 728, 746, 838, 909, 1021
Bme18I GGWCC 2 cut(s) 566, 858
BmgT120I GGNCC 6 cut(s) 566, 604, 751, 762, 763, 858
BmiI GGNNCC 4 cut(s) 568, 752, 764, 835
BmrFI CCNGG 6 cut(s) 653, 728, 746, 838, 909, 1021
BmtI GCTAGC 6 cut(s) 93, 153, 213, 273, 393, 453
Bpu10I CCTNAGC 1 cut(s) 1160
Bpu1102I GCTNAGC 4 cut(s) 135, 255, 375, 435
BpuMI CCSGG 3 cut(s) 653, 728, 1021
BsaAI YACGTR 1 cut(s) 12
BsaBI GATNNNNATC 1 cut(s) 1031
BsaI GGTCTC 1 cut(s) 313
BsaJI CCNNGG 6 cut(s) 727, 744, 745, 837, 908, 1014
BsaXI ACNNNNNCTCC 2 cut(s) 785, 815
Bsc4I CCNNNNNNNGG 8 cut(s) 333, 453, 513, 658, 733, 760, 1019, 1020
Bse21I CCTNAGG 1 cut(s) 1080
Bse8I GATNNNNATC 1 cut(s) 1031
BseBI CCWGG 3 cut(s) 746, 838, 909
BseDI CCNNGG 6 cut(s) 727, 744, 745, 837, 908, 1014
BseGI GGATG 1 cut(s) 1032
BseJI GATNNNNATC 1 cut(s) 1031
BseLI CCNNNNNNNGG 8 cut(s) 333, 453, 513, 658, 733, 760, 1019, 1020
BseMII CTCAG 2 cut(s) 1071, 1174
BseRI GAGGAG 1 cut(s) 61
BseSI GKGCMC 1 cut(s) 766
BseXI GCAGC 2 cut(s) 539, 689
BseYI CCCAGC 1 cut(s) 1004
Bsh1236I CGCG 1 cut(s) 573
Bsh1285I CGRYCG 1 cut(s) 618
BshFI GGCC 4 cut(s) 606, 753, 764, 1019
BsiEI CGRYCG 1 cut(s) 618
BsiHKAI GWGCWC 1 cut(s) 1182
BsiSI CCGG 3 cut(s) 652, 727, 1020
BslFI GGGAC 8 cut(s) 229, 289, 349, 469, 552, 668, 676, 899
BslI CCNNNNNNNGG 8 cut(s) 333, 453, 513, 658, 733, 760, 1019, 1020
BsmFI GGGAC 8 cut(s) 229, 289, 349, 469, 552, 668, 676, 899
BsnI GGCC 4 cut(s) 606, 753, 764, 1019
Bso31I GGTCTC 1 cut(s) 313
Bsp120I GGGCCC 1 cut(s) 762
Bsp1286I GDGCHC 2 cut(s) 766, 1182
Bsp143I GATC 2 cut(s) 615, 714
Bsp1720I GCTNAGC 4 cut(s) 135, 255, 375, 435
BspANI GGCC 4 cut(s) 606, 753, 764, 1019
BspCNI CTCAG 2 cut(s) 1072, 1173
BspFNI CGCG 1 cut(s) 573
BspLI GGNNCC 4 cut(s) 568, 752, 764, 835
BspMI ACCTGC 1 cut(s) 554
BspOI GCTAGC 6 cut(s) 93, 153, 213, 273, 393, 453
BspTNI GGTCTC 1 cut(s) 313
BssECI CCNNGG 6 cut(s) 727, 744, 745, 837, 908, 1014
BssMI GATC 2 cut(s) 615, 714
BssT1I CCWWGG 1 cut(s) 1014
Bst2UI CCWGG 3 cut(s) 746, 838, 909
Bst4CI ACNGT 6 cut(s) 187, 247, 427, 545, 635, 808
Bst6I CTCTTC 1 cut(s) 196
BstBAI YACGTR 1 cut(s) 12
BstF5I GGATG 1 cut(s) 1032
BstFNI CGCG 1 cut(s) 573
BstHHI GCGC 3 cut(s) 141, 261, 441
BstKTI GATC 2 cut(s) 618, 717
BstMBI GATC 2 cut(s) 615, 714
BstMCI CGRYCG 1 cut(s) 618
BstNI CCWGG 3 cut(s) 746, 838, 909
BstNSI RCATGY 2 cut(s) 60, 669
BstSCI CCNGG 6 cut(s) 651, 726, 744, 836, 907, 1019
BstSLI GKGCMC 1 cut(s) 766
BstUI CGCG 1 cut(s) 573
BstV1I GCAGC 2 cut(s) 539, 689
BstX2I RGATCY 1 cut(s) 714
BstYI RGATCY 1 cut(s) 714
Bsu36I CCTNAGG 1 cut(s) 1080
BsuI GTATCC 1 cut(s) 1078
BsuRI GGCC 4 cut(s) 606, 753, 764, 1019
BtsCI GGATG 1 cut(s) 1032
BveI ACCTGC 1 cut(s) 554
CaiI CAGNNNCTG 1 cut(s) 431
CfoI GCGC 3 cut(s) 141, 261, 441
Cfr13I GGNCC 6 cut(s) 566, 604, 751, 762, 763, 858
CviAII CATG 4 cut(s) 57, 638, 666, 759
DpnI GATC 2 cut(s) 617, 716
DpnII GATC 2 cut(s) 615, 714
EaeI YGGCCR 1 cut(s) 1017
Eam1104I CTCTTC 1 cut(s) 196
EarI CTCTTC 1 cut(s) 196
EciI GGCGGA 1 cut(s) 16
Ecl136II GAGCTC 1 cut(s) 1180
Eco130I CCWWGG 1 cut(s) 1014
Eco24I GRGCYC 2 cut(s) 766, 1182
Eco31I GGTCTC 1 cut(s) 313
Eco47I GGWCC 2 cut(s) 566, 858
Eco53kI GAGCTC 1 cut(s) 1180
Eco72I CACGTG 1 cut(s) 12
Eco81I CCTNAGG 1 cut(s) 1080
EcoICRI GAGCTC 1 cut(s) 1180
EcoO109I RGGNCCY 3 cut(s) 566, 604, 751
EcoRII CCWGG 3 cut(s) 744, 836, 907
EcoT14I CCWWGG 1 cut(s) 1014
EcoT38I GRGCYC 2 cut(s) 766, 1182
ErhI CCWWGG 1 cut(s) 1014
FaeI CATG 4 cut(s) 60, 641, 669, 762
FaiI YATR 8 cut(s) 58, 639, 667, 760, 780, 867, 1151, 1185
FaqI GGGAC 8 cut(s) 229, 289, 349, 469, 552, 668, 676, 899
FatI CATG 4 cut(s) 56, 637, 665, 758
FauI CCCGC 4 cut(s) 206, 266, 446, 578
Fnu4HI GCNGC 2 cut(s) 553, 678
FokI GGATG 1 cut(s) 1039
FriOI GRGCYC 2 cut(s) 766, 1182
Fsp4HI GCNGC 2 cut(s) 553, 678
GlaI GCGC 3 cut(s) 140, 260, 440
GluI GCNGC 2 cut(s) 553, 678
GsaI CCCAGC 1 cut(s) 1008
HaeIII GGCC 4 cut(s) 606, 753, 764, 1019
HapII CCGG 3 cut(s) 652, 727, 1020
HhaI GCGC 3 cut(s) 141, 261, 441
Hin1II CATG 4 cut(s) 60, 641, 669, 762
Hin6I GCGC 3 cut(s) 139, 259, 439
HinP1I GCGC 3 cut(s) 139, 259, 439
HincII GTYRAC 3 cut(s) 671, 1096, 1167
HindII GTYRAC 3 cut(s) 671, 1096, 1167
HinfI GANTC 6 cut(s) 517, 740, 915, 996, 1009, 1135
HpaI GTTAAC 1 cut(s) 1167
HpaII CCGG 3 cut(s) 652, 727, 1020
HphI GGTGA 2 cut(s) 785, 1144
Hpy166II GTNNAC 4 cut(s) 590, 671, 1096, 1167
Hpy188I TCNGA 2 cut(s) 849, 1105
Hpy188III TCNNGA 1 cut(s) 533
Hpy8I GTNNAC 4 cut(s) 590, 671, 1096, 1167
HpyAV CCTTC 1 cut(s) 1123
HpyCH4III ACNGT 6 cut(s) 187, 247, 427, 545, 635, 808
HpyCH4IV ACGT 1 cut(s) 11
HpyCH4V TGCA 5 cut(s) 236, 476, 501, 555, 1057
HpySE526I ACGT 1 cut(s) 11
Hsp92II CATG 4 cut(s) 60, 641, 669, 762
HspAI GCGC 3 cut(s) 139, 259, 439
KspAI GTTAAC 1 cut(s) 1167
Kzo9I GATC 2 cut(s) 615, 714
LmnI GCTCC 2 cut(s) 685, 1177
Lsp1109I GCAGC 2 cut(s) 539, 689
MaeII ACGT 1 cut(s) 11
MaeIII GTNAC 5 cut(s) 241, 629, 640, 1120, 1132
MalI GATC 2 cut(s) 617, 716
MboI GATC 2 cut(s) 615, 714
MboII GAAGA 5 cut(s) 183, 281, 512, 965, 1005
MflI RGATCY 1 cut(s) 714
MhlI GDGCHC 2 cut(s) 766, 1182
MluCI AATT 3 cut(s) 899, 1109, 1172
MlyI GAGTC 2 cut(s) 734, 1129
MseI TTAA 2 cut(s) 1031, 1166
MslI CAYNNNNRTG 1 cut(s) 1066
MspA1I CMGCKG 3 cut(s) 33, 552, 599
MspI CCGG 3 cut(s) 652, 727, 1020
MspR9I CCNGG 6 cut(s) 653, 728, 746, 838, 909, 1021
MvaI CCWGG 3 cut(s) 746, 838, 909
MvnI CGCG 1 cut(s) 573
NciI CCSGG 3 cut(s) 653, 728, 1021
NdeII GATC 2 cut(s) 615, 714
NheI GCTAGC 6 cut(s) 89, 149, 209, 269, 389, 449
NlaIII CATG 4 cut(s) 60, 641, 669, 762
NlaIV GGNNCC 4 cut(s) 568, 752, 764, 835
NmeAIII GCCGAG 1 cut(s) 185
NmuCI GTSAC 3 cut(s) 241, 1120, 1132
NspI RCATGY 2 cut(s) 60, 669
PasI CCCWGGG 1 cut(s) 745
PciI ACATGT 1 cut(s) 665
PfeI GAWTC 4 cut(s) 517, 915, 996, 1009
PfoI TCCNGGA 1 cut(s) 651
PkrI GCNGC 2 cut(s) 554, 679
Ple19I CGATCG 1 cut(s) 618
PleI GAGTC 2 cut(s) 734, 1129
PmaCI CACGTG 1 cut(s) 12
PmlI CACGTG 1 cut(s) 12
PpsI GAGTC 2 cut(s) 734, 1129
Ppu21I YACGTR 1 cut(s) 12
PpuMI RGGWCCY 1 cut(s) 566
PscI ACATGT 1 cut(s) 665
Psp124BI GAGCTC 1 cut(s) 1182
Psp5II RGGWCCY 1 cut(s) 566
Psp6I CCWGG 3 cut(s) 744, 836, 907
PspCI CACGTG 1 cut(s) 12
PspFI CCCAGC 1 cut(s) 1004
PspGI CCWGG 3 cut(s) 744, 836, 907
PspN4I GGNNCC 4 cut(s) 568, 752, 764, 835
PspOMI GGGCCC 1 cut(s) 762
PspPI GGNCC 6 cut(s) 566, 604, 751, 762, 763, 858
PspPPI RGGWCCY 1 cut(s) 566
PstNI CAGNNNCTG 1 cut(s) 431
PsuI RGATCY 1 cut(s) 714
PvuI CGATCG 1 cut(s) 618
RseI CAYNNNNRTG 1 cut(s) 1066
SacI GAGCTC 1 cut(s) 1182
SaqAI TTAA 2 cut(s) 1031, 1166
SatI GCNGC 2 cut(s) 553, 678
Sau3AI GATC 2 cut(s) 615, 714
Sau96I GGNCC 6 cut(s) 566, 604, 751, 762, 763, 858
SchI GAGTC 2 cut(s) 734, 1129
ScrFI CCNGG 6 cut(s) 653, 728, 746, 838, 909, 1021
SduI GDGCHC 2 cut(s) 766, 1182
SinI GGWCC 2 cut(s) 566, 858
SmiMI CAYNNNNRTG 1 cut(s) 1066
Sse9I AATT 3 cut(s) 899, 1109, 1172
SstI GAGCTC 1 cut(s) 1182
StyD4I CCNGG 6 cut(s) 651, 726, 744, 836, 907, 1019
StyI CCWWGG 1 cut(s) 1014
TaaI ACNGT 6 cut(s) 187, 247, 427, 545, 635, 808
TaiI ACGT 1 cut(s) 14
TaqI TCGA 1 cut(s) 1065
TasI AATT 3 cut(s) 899, 1109, 1172
TfiI GAWTC 4 cut(s) 517, 915, 996, 1009
Tru1I TTAA 2 cut(s) 1031, 1166
Tru9I TTAA 2 cut(s) 1031, 1166
TseFI GTSAC 3 cut(s) 241, 1120, 1132
TseI GCWGC 2 cut(s) 552, 677
Tsp45I GTSAC 3 cut(s) 241, 1120, 1132
TspDTI ATGAA 9 cut(s) 38, 98, 158, 218, 338, 398, 518, 854, 1038
TspGWI ACGGA 2 cut(s) 33, 966
VpaK11BI GGWCC 2 cut(s) 566, 858
XapI RAATTY 2 cut(s) 899, 1109
XceI RCATGY 2 cut(s) 60, 669
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.