RchiOBHm_Chr7g0225761

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
48636663 .. 48638135
1473 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20221

Sequence Viewer

Length: 1278 bp
ATGGCAAGGGTTTATGGTCCAATTTACAAACTCCAACTTGGTACCAAGTTGTGCATTGTGGTGAGCTCACCTGAGCTTGTGAAGCAAGTGGTTCGTGACCATGACACAACATTTTCCAACCGTAACCCTACAATTGCTGATTGGAGGAAGCTGCGCAAGGTGTTTGTGGGTCAGATGCTGAGCAAAATCAACCTTGATGATGGCTATGCTCTGAGAAAAGAGGAGGTGCACAAGTCGATCAGTCATATTTATCATGACAAAATTGGAACCCAAACTGATGTGGGTGAGTTTGCATTTTCCACAGTAATCAACGCAACTTTGCGTATGCTATGGGGCGCAACTCTACAAGGGACTAATTTTGGTGAAGATTATAGGAAATTGGTGGCAGAAATTGTATATCTATTTGCAAAACCAAACATTTCGGACTATTTTCCTGTGCTTGCAAGGTTTGACATACAAGGAATTGAGAGGCAAGCAAAGAAAGTTCAATCCGCGATTGACAAGATTCTAAGTCGTGCCATAGAAGAACAGATGAAGATGCTAGCCTCAGCCAAAAATGGGGGAGTACAACAAAAACATGAAAGGAAGGACTTTCTGCAGTTCCTCTTGGAGAACAATAATAATCATGAAGATGGTTCAACATCGTTTACAGATATCGTGGTGGGTGGAACTGACACTACGGCAACAATAGGGGAATGGGTTCTGACTGAGCTGATGCAGCACCCAGAAGAAATGATAAGAGTTCAAGAAGAACTAACACAAATTGTGGGGTTGAACAACTTGGTTGAAGAGTTTCATTTTCCGAAATTACATCATTTAGATGCTGTGATCAAAGAGACATTTTGCTTGCACCCTCCAGTGCCCCTTCTAGTGCCCCGGCGTTCAAGCCAACCTACCATCATTGGTGGCTATTACATACCAAAAGGTTCCACTATTTTTCTCAATGCTTGGGCCATACAGAGAGTTCCAAGTGTTTGGGACGATCCCTTGGAATTTAGACCCCAGAGGTTCCTAAATCCAAGCAATAGCTTTGATTACCAGGGCAACAAATTTCAGTTTCTTCCATTTGGTTATGGGAGGAGAATATGTGCCGGGATTCCCTTAGCAGAGAGGATGCTGTTCTATGTGTTGGCTTCATTCTTGCATTCGTTTGATTGGAAACTGCCTAATGACAAAAAGCTTGACGTTTCAGACAAATTTGGGATTGTGACAAAGAAAAACACTCCACTTATTGCTGTACCAACACCCAGGTTATCTAATTTGGAGCTCTATGCTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

425

Amino Acids

48.5

Weight (kDa)

8.52

Isoelectric Point (pI)

35.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 408 4.2e-81 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000490)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10240 FvH4_5g00571 FvH4_5g00571 FvH4_5g00571 FvH4_5g00572 FvH4_5g00572 FvH4_5g00572 FvH4_5g00573 FvH4_5g37440 FvH4_5g37450
prunus_persica Prupe.5G078400_v2.0.a1 Prupe.5G078500_v2.0.a1 Prupe.5G078600_v2.0.a1 Prupe.5G078800_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0419931 RchiOBHm_Chr4g0419951 RchiOBHm_Chr4g0420051 RchiOBHm_Chr7g0201681 RchiOBHm_Chr7g0201771 RchiOBHm_Chr7g0201781 RchiOBHm_Chr7g0201791 RchiOBHm_Chr7g0225701 RchiOBHm_Chr7g0225731 RchiOBHm_Chr7g0225761 RchiOBHm_Chr7g0225791 RchiOBHm_Chr7g0225861
rosa_laevigata RLG00000001786 RLG00000001795 RLG00000003649 RLG00000003650 RLG00000003651 RLG00000003652 RLG00000003655 RLG00000003656 RLG00000003657
rosa_multiflora Rmu_sc0001030.1_g000001 Rmu_sc0001030.1_g000005 Rmu_sc0001030.1_g000006 Rmu_sc0006133.1_g000002 Rmu_sc0006637.1_g000005 Rmu_sc0012416.1_g000003 Rmu_sc0016902.1_g000001 Rmu_sc0025481.1_g000003
rosa_roxburghii Rroxscaffold_3G00233490 Rroxscaffold_3G00233550 Rroxscaffold_3G00233560 Rroxscaffold_3G00255100 Rroxscaffold_3G00255110
rosa_rugosa Rorug07G0065300 Rorug07G0065400 Rorug07G0065500 Rorug07G0065600 Rorug07G0065600 Rorug07G0065600 Rorug07G0065700 Rorug07G0065800 Rorug07G0065900 Rorug07G0232900
rosa_samantha Rh3AG071400 Rh3BG286400 Rh3CG072700 Rh4BG225100 Rh4CG235600 Rh5CG585000 Rh7AG192600 Rh7AG193000 Rh7AG193100 Rh7AG193300 Rh7AG371100 Rh7AG387700 Rh7BG194700 Rh7BG194900 Rh7BG195000 Rh7BG366600 Rh7CG203800 Rh7CG204000 Rh7CG204300 Rh7CG389700 Rh7CG407300 Rh7DG198100 Rh7DG198900 Rh7DG199100 Rh7DG377600
rosa_wichuraiana Rw0G020990 Rw7G016880 Rw7G016890 Rw7G028030 Rw7G031840 Rw7G031890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 155
Acc65I GGTACC 1 cut(s) 41
AccB1I GGYRCC 1 cut(s) 41
AccII CGCG 1 cut(s) 494
AciI CCGC 1 cut(s) 492
AclWI GGATC 1 cut(s) 977
AcsI RAATTY 3 cut(s) 992, 1049, 1196
AfaI GTAC 3 cut(s) 43, 567, 1239
AfiI CCNNNNNNNGG 1 cut(s) 558
AgsI TTSAA 6 cut(s) 488, 639, 746, 775, 788, 885
AjnI CCWGG 2 cut(s) 1038, 1247
AluBI AGCT 7 cut(s) 66, 76, 151, 712, 1029, 1180, 1267
AluI AGCT 7 cut(s) 66, 76, 151, 712, 1029, 1180, 1267
Alw21I GWGCWC 3 cut(s) 68, 231, 1269
Alw26I GTCTC 1 cut(s) 830
Alw44I GTGCAC 1 cut(s) 227
AlwI GGATC 1 cut(s) 977
AlwNI CAGNNNCTG 1 cut(s) 178
AoxI GGCC 1 cut(s) 951
ApaLI GTGCAC 1 cut(s) 227
ApeKI GCWGC 2 cut(s) 151, 718
ApoI RAATTY 3 cut(s) 992, 1049, 1196
Asp700I GAANNNNTTC 2 cut(s) 699, 792
Asp718I GGTACC 1 cut(s) 41
AspLEI GCGC 2 cut(s) 156, 338
AspS9I GGNCC 2 cut(s) 17, 951
AsuC2I CCSGG 2 cut(s) 877, 1093
AsuHPI GGTGA 4 cut(s) 60, 73, 296, 374
AsuNHI GCTAGC 1 cut(s) 541
AvaII GGWCC 1 cut(s) 17
BaeGI GKGCMC 3 cut(s) 231, 864, 876
BanI GGYRCC 1 cut(s) 41
BanII GRGCYC 2 cut(s) 68, 1269
Bbv12I GWGCWC 3 cut(s) 68, 231, 1269
BbvCI CCTCAGC 1 cut(s) 547
BbvI GCAGC 2 cut(s) 138, 730
BccI CCATC 3 cut(s) 194, 626, 905
BceAI ACGGC 1 cut(s) 696
BcgI CGANNNNNNTGC 2 cut(s) 74, 108
BciT130I CCWGG 2 cut(s) 1040, 1249
BclI TGATCA 1 cut(s) 828
BcnI CCSGG 2 cut(s) 877, 1093
BcoDI GTCTC 1 cut(s) 830
BfaI CTAG 2 cut(s) 542, 869
BfmI CTRYAG 1 cut(s) 596
BisI GCNGC 2 cut(s) 152, 719
BlpI GCTNAGC 1 cut(s) 179
BlsI GCNGC 2 cut(s) 153, 720
Bme1390I CCNGG 4 cut(s) 877, 1040, 1093, 1249
Bme18I GGWCC 1 cut(s) 17
BmgT120I GGNCC 2 cut(s) 17, 951
BmiI GGNNCC 4 cut(s) 43, 268, 928, 1010
BmrFI CCNGG 4 cut(s) 877, 1040, 1093, 1249
BmsI GCATC 5 cut(s) 165, 528, 705, 811, 1104
BmtI GCTAGC 1 cut(s) 545
BpmI CTGGAG 1 cut(s) 840
Bpu10I CCTNAGC 3 cut(s) 72, 547, 1102
Bpu1102I GCTNAGC 1 cut(s) 179
BpuMI CCSGG 2 cut(s) 877, 1093
BsaJI CCNNGG 4 cut(s) 875, 987, 1039, 1247
BsaXI ACNNNNNCTCC 2 cut(s) 1072, 1102
Bsc4I CCNNNNNNNGG 1 cut(s) 558
Bse1I ACTGG 1 cut(s) 857
BseBI CCWGG 2 cut(s) 1040, 1249
BseDI CCNNGG 4 cut(s) 875, 987, 1039, 1247
BseGI GGATG 1 cut(s) 1119
BseLI CCNNNNNNNGG 1 cut(s) 558
BseMII CTCAG 5 cut(s) 63, 170, 203, 561, 699
BseNI ACTGG 1 cut(s) 857
BseRI GAGGAG 2 cut(s) 236, 1093
BseSI GKGCMC 3 cut(s) 231, 864, 876
BseXI GCAGC 2 cut(s) 138, 730
Bsh1236I CGCG 1 cut(s) 494
BshFI GGCC 1 cut(s) 953
BshNI GGYRCC 1 cut(s) 41
BsiHKAI GWGCWC 3 cut(s) 68, 231, 1269
BsiSI CCGG 2 cut(s) 877, 1092
BslFI GGGAC 2 cut(s) 364, 992
BslI CCNNNNNNNGG 1 cut(s) 558
BsmAI GTCTC 1 cut(s) 830
BsmFI GGGAC 2 cut(s) 364, 992
BsmI GAATGC 1 cut(s) 1144
BsnI GGCC 1 cut(s) 953
Bsp1286I GDGCHC 5 cut(s) 68, 231, 864, 876, 1269
Bsp143I GATC 3 cut(s) 237, 828, 982
Bsp1720I GCTNAGC 1 cut(s) 179
BspACI CCGC 1 cut(s) 492
BspANI GGCC 1 cut(s) 953
BspCNI CTCAG 5 cut(s) 64, 171, 204, 560, 700
BspFNI CGCG 1 cut(s) 494
BspHI TCATGA 2 cut(s) 253, 625
BspLI GGNNCC 4 cut(s) 43, 268, 928, 1010
BspMAI CTGCAG 1 cut(s) 600
BspOI GCTAGC 1 cut(s) 545
BspPI GGATC 1 cut(s) 977
BspT107I GGYRCC 1 cut(s) 41
BsrI ACTGG 1 cut(s) 857
BssECI CCNNGG 4 cut(s) 875, 987, 1039, 1247
BssMI GATC 3 cut(s) 237, 828, 982
BssT1I CCWWGG 1 cut(s) 987
Bst2UI CCWGG 2 cut(s) 1040, 1249
Bst4CI ACNGT 2 cut(s) 122, 304
Bst6I CTCTTC 1 cut(s) 783
BstC8I GCNNGC 4 cut(s) 441, 474, 543, 848
BstDEI CTNAG 7 cut(s) 72, 179, 212, 509, 547, 708, 1102
BstF5I GGATG 1 cut(s) 1119
BstFNI CGCG 1 cut(s) 494
BstHHI GCGC 2 cut(s) 156, 338
BstKTI GATC 3 cut(s) 240, 831, 985
BstMAI GTCTC 1 cut(s) 830
BstMBI GATC 3 cut(s) 237, 828, 982
BstMWI GCNNNNNNNGC 2 cut(s) 82, 718
BstNI CCWGG 2 cut(s) 1040, 1249
BstSCI CCNGG 4 cut(s) 875, 1038, 1091, 1247
BstSFI CTRYAG 1 cut(s) 596
BstSLI GKGCMC 3 cut(s) 231, 864, 876
BstUI CGCG 1 cut(s) 494
BstV1I GCAGC 2 cut(s) 138, 730
BstXI CCANNNNNNTGG 1 cut(s) 975
BsuRI GGCC 1 cut(s) 953
BtsCI GGATG 1 cut(s) 1119
BtsIMutI CAGTG 1 cut(s) 864
Cac8I GCNNGC 4 cut(s) 441, 474, 543, 848
CaiI CAGNNNCTG 1 cut(s) 178
CciI TCATGA 2 cut(s) 253, 625
CfoI GCGC 2 cut(s) 156, 338
Cfr13I GGNCC 2 cut(s) 17, 951
Csp6I GTAC 3 cut(s) 42, 566, 1238
CviAII CATG 4 cut(s) 101, 254, 578, 626
CviQI GTAC 3 cut(s) 42, 566, 1238
DdeI CTNAG 7 cut(s) 72, 179, 212, 509, 547, 708, 1102
DpnI GATC 3 cut(s) 239, 830, 984
DpnII GATC 3 cut(s) 237, 828, 982
Eam1104I CTCTTC 1 cut(s) 783
EarI CTCTTC 1 cut(s) 783
Ecl136II GAGCTC 2 cut(s) 66, 1267
Eco130I CCWWGG 1 cut(s) 987
Eco24I GRGCYC 2 cut(s) 68, 1269
Eco32I GATATC 1 cut(s) 655
Eco47I GGWCC 1 cut(s) 17
Eco53kI GAGCTC 2 cut(s) 66, 1267
EcoICRI GAGCTC 2 cut(s) 66, 1267
EcoRII CCWGG 2 cut(s) 1038, 1247
EcoRV GATATC 1 cut(s) 655
EcoT14I CCWWGG 1 cut(s) 987
EcoT38I GRGCYC 2 cut(s) 68, 1269
ErhI CCWWGG 1 cut(s) 987
FaeI CATG 4 cut(s) 104, 257, 581, 629
FaqI GGGAC 2 cut(s) 364, 992
FatI CATG 4 cut(s) 100, 253, 577, 625
FbaI TGATCA 1 cut(s) 828
Fnu4HI GCNGC 2 cut(s) 152, 719
FokI GGATG 1 cut(s) 1126
FriOI GRGCYC 2 cut(s) 68, 1269
Fsp4HI GCNGC 2 cut(s) 152, 719
FspBI CTAG 2 cut(s) 542, 869
FspI TGCGCA 1 cut(s) 155
GlaI GCGC 2 cut(s) 155, 337
GluI GCNGC 2 cut(s) 152, 719
GsuI CTGGAG 1 cut(s) 840
HaeIII GGCC 1 cut(s) 953
HapII CCGG 2 cut(s) 877, 1092
HhaI GCGC 2 cut(s) 156, 338
Hin1II CATG 4 cut(s) 104, 257, 581, 629
Hin6I GCGC 2 cut(s) 154, 336
HinP1I GCGC 2 cut(s) 154, 336
HindIII AAGCTT 1 cut(s) 1178
HinfI GANTC 2 cut(s) 505, 1096
HpaII CCGG 2 cut(s) 877, 1092
HphI GGTGA 4 cut(s) 60, 73, 296, 374
Hpy166II GTNNAC 2 cut(s) 229, 648
Hpy188I TCNGA 6 cut(s) 174, 213, 424, 705, 804, 1192
Hpy188III TCNNGA 4 cut(s) 95, 254, 626, 746
Hpy8I GTNNAC 2 cut(s) 229, 648
HpyAV CCTTC 2 cut(s) 580, 875
HpyCH4III ACNGT 2 cut(s) 122, 304
HpyCH4IV ACGT 1 cut(s) 1185
HpyCH4V TGCA 9 cut(s) 54, 229, 293, 407, 443, 598, 718, 850, 1144
HpyF10VI GCNNNNNNNGC 2 cut(s) 82, 718
HpyF3I CTNAG 7 cut(s) 72, 179, 212, 509, 547, 708, 1102
HpySE526I ACGT 1 cut(s) 1185
Hsp92II CATG 4 cut(s) 104, 257, 581, 629
HspAI GCGC 2 cut(s) 154, 336
KpnI GGTACC 1 cut(s) 45
Ksp22I TGATCA 1 cut(s) 828
Kzo9I GATC 3 cut(s) 237, 828, 982
LmnI GCTCC 1 cut(s) 1264
Lsp1109I GCAGC 2 cut(s) 138, 730
LweI GCATC 5 cut(s) 165, 528, 705, 811, 1104
MaeI CTAG 2 cut(s) 542, 869
MaeII ACGT 1 cut(s) 1185
MaeIII GTNAC 3 cut(s) 95, 122, 1207
MalI GATC 3 cut(s) 239, 830, 984
MboI GATC 3 cut(s) 237, 828, 982
MboII GAAGA 8 cut(s) 377, 536, 547, 641, 740, 761, 800, 1052
MfeI CAATTG 1 cut(s) 132
MhlI GDGCHC 5 cut(s) 68, 231, 864, 876, 1269
MmeI TCCRAC 2 cut(s) 58, 141
MroXI GAANNNNTTC 2 cut(s) 699, 792
MseI TTAA 1 cut(s) 1276
MslI CAYNNNNRTG 3 cut(s) 59, 630, 819
MspI CCGG 2 cut(s) 877, 1092
MspR9I CCNGG 4 cut(s) 877, 1040, 1093, 1249
MunI CAATTG 1 cut(s) 132
Mva1269I GAATGC 1 cut(s) 1144
MvaI CCWGG 2 cut(s) 1040, 1249
MvnI CGCG 1 cut(s) 494
MwoI GCNNNNNNNGC 2 cut(s) 82, 718
NciI CCSGG 2 cut(s) 877, 1093
NdeII GATC 3 cut(s) 237, 828, 982
NheI GCTAGC 1 cut(s) 541
NlaIII CATG 4 cut(s) 104, 257, 581, 629
NlaIV GGNNCC 4 cut(s) 43, 268, 928, 1010
NmuCI GTSAC 2 cut(s) 95, 1207
NsbI TGCGCA 1 cut(s) 155
PagI TCATGA 2 cut(s) 253, 625
PctI GAATGC 1 cut(s) 1144
PdmI GAANNNNTTC 2 cut(s) 699, 792
PfeI GAWTC 2 cut(s) 505, 1096
PkrI GCNGC 2 cut(s) 153, 720
Psp124BI GAGCTC 2 cut(s) 68, 1269
Psp6I CCWGG 2 cut(s) 1038, 1247
PspGI CCWGG 2 cut(s) 1038, 1247
PspN4I GGNNCC 4 cut(s) 43, 268, 928, 1010
PspPI GGNCC 2 cut(s) 17, 951
PsrI GAACNNNNNNTAC 2 cut(s) 661, 693
PstI CTGCAG 1 cut(s) 600
PstNI CAGNNNCTG 1 cut(s) 178
RsaI GTAC 3 cut(s) 43, 567, 1239
RsaNI GTAC 3 cut(s) 42, 566, 1238
RseI CAYNNNNRTG 3 cut(s) 59, 630, 819
SacI GAGCTC 2 cut(s) 68, 1269
SaqAI TTAA 1 cut(s) 1276
SatI GCNGC 2 cut(s) 152, 719
Sau3AI GATC 3 cut(s) 237, 828, 982
Sau96I GGNCC 2 cut(s) 17, 951
ScrFI CCNGG 4 cut(s) 877, 1040, 1093, 1249
SduI GDGCHC 5 cut(s) 68, 231, 864, 876, 1269
SfaNI GCATC 5 cut(s) 165, 528, 705, 811, 1104
SfcI CTRYAG 1 cut(s) 596
SinI GGWCC 1 cut(s) 17
SmiMI CAYNNNNRTG 3 cut(s) 59, 630, 819
SsiI CCGC 1 cut(s) 492
SspMI CTAG 2 cut(s) 542, 869
SstI GAGCTC 2 cut(s) 68, 1269
StyD4I CCNGG 4 cut(s) 875, 1038, 1091, 1247
StyI CCWWGG 1 cut(s) 987
TaaI ACNGT 2 cut(s) 122, 304
TaiI ACGT 1 cut(s) 1188
TaqI TCGA 1 cut(s) 236
TatI WGTACW 1 cut(s) 565
TfiI GAWTC 2 cut(s) 505, 1096
Tru1I TTAA 1 cut(s) 1276
Tru9I TTAA 1 cut(s) 1276
TscAI CASTG 1 cut(s) 864
TseFI GTSAC 2 cut(s) 95, 1207
TseI GCWGC 2 cut(s) 151, 718
Tsp45I GTSAC 2 cut(s) 95, 1207
TspDTI ATGAA 5 cut(s) 548, 594, 642, 785, 1125
TspRI CASTG 1 cut(s) 864
VneI GTGCAC 1 cut(s) 227
VpaK11BI GGWCC 1 cut(s) 17
XapI RAATTY 3 cut(s) 992, 1049, 1196
XmnI GAANNNNTTC 2 cut(s) 699, 792
XspI CTAG 2 cut(s) 542, 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.