Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0004902

Physical Location & Seq

Genomic Coordinates Reverse (-)

2174566 .. 2179372

Gene Structure 4807 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g03730.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGGCTACAAATGGTTCAGCAGGACATATATGTCCGTCTCCGATGAAGGCGACATCAAATGGTGTATTCCAGGGTGATAATCCTCTTCATTTTGCGCTGCCTCTTGCTATTTTGCAGATATGTATAGTAGTTGCTCTCACTCGGGGTCTTGCCTATCTTCTGAAACCACTAAGACAGCCACGAGTCATTGCTGAGATTATTGGAGGAGTACTGCTTGGTCCGTCAGCTCTGGGACGAAACAAAAGTTATCTCCAGGCAATATTTCCACCAAAGAGTATCACGGTGTTAGACACCTTAGCAAACCTTGGTCTCCTGTTCTTTCTATTCTTGGCAGGCCTAGAAATAGATCCTAAAGCCCTTCGCCAGACTGGAAAAAAAGCCCTTGCCATTGCCGTAATAGGAATCAGTCTCCCATTTGCATTAGGAATTGGTTCATCGTTTGTCCTCAGAGCAACCATTTCCAAAGGGGTAGATTTAACTGCCTTTCTTGTGTTCATGGGTGTGGCCCTCTCTATAACTGCTTTCCCCGTTTTAGCACGTATTCTGGCTGAGCTGAAACTTTTGACTACTGAAATCGGAAGATTGGCTATGTCAGCTGCTGCAGTTAATGATGTGGCTGCCTGGGTTCTGCTTGCTCTTGCCATTGCCTTATCGGGTAGTAACCAATCTCCCCTTGTTTCGTTGTGGGTCTTATTGTCTGGATTTGTGTTCGTCATCTGTGCAATTCTTGTTGTACCCTCAATCTTCAAATGGATGGCTCAACGTTGTCATGAAGGTGAACCCATTGACGAAATCTACGTGTGTGCTACACTTACTGCTGTTCTGGCAGCTGGATTTATTACTGATACAATTGGTATTCACGCCATGTTTGGTGCTTTTGTGATTGGAGTTCTTGTTCCAAAGGAGGGGCCATTTGTGGGTAGTCTCGTGGAAAAAGTTGAAGATCTTGTATCTGGTCTATTTCTTCCGTTGTACTTCGTCTCAAGTGGACTGAAGACCAATGTAGCAACAATTGAGGGAGTTCAGTCATGGGGTCTATTAGTTTTGGTCATATTTACTGCCTGTTTTGGGAAGATTTTCGGGACTGTTATGGTCTCACTTCTATGCAAGGTGCCTGTCCGGGAGGCTTTAGCTCTTGGGTTCCTAATGAACACTAAAGGATTGGTGGAACTCATTGTCCTCAACATTGGCAAAGATAGAAAGGTTTTGAATGACCAGACTTTTGCCATTATGGTTCTAATGGCTCTGTTTACTACTTTCATCACCACACCTCTTGTCACTGCTGTATATAAGCCAGCAAAAAGAGCCAGAATGGCTGATTACAAGTATAAAACAATTGAAAGGAAGAATACGAACTCCCAGCTAAGGATCTTGTCCTGTTTCCATAGTGCCAGAAACATTCCATCAATTATAAATTTGCTTGAGGCCTCACGAGGTACAAAGAAACGTGATGGCCTTTGTGTTTATGCAATGCACCTGATGGAGCTCTCTGAGAGGTCATCGGCGATACTAATGGTACACAAGGCGAGAAGGAATGGGTTACCTTTCTGGAATAAGGGACTGCGATCAAATACTGATAACGTTGTTGTGGCATTCGAGGCGTACCAACAATTGAGCCATGTGTCCATCAGGCCAATGACAGAAATCTCTTCAGTTTCTAATATGCATGAGGACATTTGTGCTACAGCTGAGAACAAAAGAGCTGCAATCATAATCCTTCCATTCCATAAGCACCAGAGGCTAGATGGTACATTAGAAACTACACGAAATGACTTTCGTGGGGTTAACAAAAGAGTTCTTGAGCATGCACCATGCTCCGTTGGAATTCTAGTCGACCGTGGGCTTGGTGGAACCACACATATTGCTGCAAGTAATGTTTCTTATTTCATTACAGTTCTTTACTTTGGGGGCCGTGATGACCGTGAAGCCCTTGCCTATGGGGCTCGCATGGCTGAGCACCCTGGTATCCGTTTAGTGGTCATTCGCTTCTTAGTGGAACCTGAGATTGTTGGGGAGATATCAACAGTTGATATTGATCACAATTCTGGCAGCAAAGTGGGGTCGGTAGATGAGGAATTCCTTGCTGAATTCAAGCATAGAATCGTTCAGGATGACTCAATCACATACGAAGAGAAGGTAGTCAGAAATGAGGCCCAAACCATTGGTGTGATTCGTGAGAAAGGTCGATGCCATCTGTTTCTGGTGGGACGATGCCCTGGTGGAGAAGTAGCCTTGGCCCTAAATAAGAGGAGCGAGTGCCCGGAATTGGGGCCTGTGGGAAGCTTGTTGATATCCCCAGATTTCTCTACTCAAGCATCAGTCTTGGTACTGCAACAATACAACGGTCAGCTATGCAATAAAGCAAGGCATTCCCTACCCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0006810 GO:0006811 GO:0006812 GO:0006885 GO:0008150 GO:0012505 GO:0015672 GO:0031410 GO:0031982 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0065007 GO:0065008 GO:0097708 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

795

Amino Acids

86.17

Weight (kDa)

9.05

Isoelectric Point (pI)

39.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	45 - 426	7.2e-67	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	485 - 625	3.4e-47	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	629 - 782	3e-30	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41610 AT5G41610 AT5G41610
fragaria_vesca	FvH4_5g03730 FvH4_5g03730 FvH4_5g03730 FvH4_5g03730
malus_domestica	MD06G1096700.v1.1 MD14G1117100.v1.1
prunus_persica	Prupe.5G111600_v2.0.a1 Prupe.5G111600_v2.0.a1 Prupe.5G111600_v2.0.a1 Prupe.5G111600_v2.0.a1 Prupe.5G111600_v2.0.a1 Prupe.5G111600_v2.0.a1 Prupe.5G111600_v2.0.a1
pyrus_communis	pycom06g09300
rosa_chinensis	RchiOBHm_Chr7g0195981
rosa_laevigata	RLG00000004077
rosa_multiflora	Rmu_ssc0000453.1_g000006
rosa_roxburghii	Rroxscaffold_3G00259970
rosa_rugosa	Rorug07G0028300 Rorug07G0028400 Rorug07G0028500 Rorug07G0028600
rosa_samantha	Rh7AG155300 Rh7BG157200 Rh7CG160700 Rh7DG156300
rosa_wichuraiana	Rw7G013280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1412
AasI	GACNNNNNNGTC	1 cut(s)	30
AccB1I	GGYRCC	1 cut(s)	1111
AccI	GTMKAC	1 cut(s)	1833
AclI	AACGTT	2 cut(s)	763, 1581
AclWI	GGATC	2 cut(s)	341, 1376
AcsI	RAATTY	4 cut(s)	1414, 1824, 2075, 2087
AcuI	CTGAAG	2 cut(s)	1013, 1635
AfaI	GTAC	8 cut(s)	210, 735, 974, 1438, 1518, 1604, 1750, 2328
AfiI	CCNNNNNNNGG	7 cut(s)	905, 917, 1068, 1365, 1975, 2266, 2267
AflIII	ACRYGT	1 cut(s)	798
AgsI	TTSAA	5 cut(s)	748, 941, 1210, 1340, 2092
AjnI	CCWGG	5 cut(s)	69, 252, 620, 1960, 2215
AloI	GAACNNNNNNTCC	4 cut(s)	879, 911, 1161, 1193
Alw21I	GWGCWC	2 cut(s)	1488, 1959
Alw26I	GTCTC	6 cut(s)	42, 314, 413, 929, 985, 1099
AlwI	GGATC	2 cut(s)	341, 1376
AlwNI	CAGNNNCTG	1 cut(s)	599
Ama87I	CYCGRG	1 cut(s)	141
ApeKI	GCWGC	8 cut(s)	97, 596, 599, 617, 827, 1703, 1865, 2049
ApoI	RAATTY	4 cut(s)	1414, 1824, 2075, 2087
ArsI	GACNNNNNNTTYG	2 cut(s)	1205, 1237
Asp700I	GAANNNNTTC	2 cut(s)	430, 1076
AspLEI	GCGC	1 cut(s)	97
AspS9I	GGNCC	7 cut(s)	218, 505, 908, 1909, 2152, 2236, 2270
AsuC2I	CCSGG	2 cut(s)	1121, 2261
AsuHPI	GGTGA	3 cut(s)	86, 788, 1255
AvaI	CYCGRG	1 cut(s)	141
AvaII	GGWCC	1 cut(s)	218
BaeGI	GKGCMC	1 cut(s)	2261
BaeI	ACNNNNGTAYC	2 cut(s)	1948, 1981
BanI	GGYRCC	1 cut(s)	1111
BanII	GRGCYC	2 cut(s)	1488, 1945
BauI	CACGAG	3 cut(s)	180, 926, 1431
BbsI	GAAGAC	1 cut(s)	1001
Bbv12I	GWGCWC	2 cut(s)	1488, 1959
BbvI	GCAGC	8 cut(s)	84, 583, 586, 604, 839, 1690, 1852, 2061
BccI	CCATC	7 cut(s)	748, 1411, 1445, 1474, 1634, 1739, 2199
BceAI	ACGGC	2 cut(s)	377, 1896
BciT130I	CCWGG	5 cut(s)	71, 254, 622, 1962, 2217
BciVI	GTATCC	1 cut(s)	1976
BclI	TGATCA	1 cut(s)	2035
BcnI	CCSGG	2 cut(s)	1121, 2261
BcoDI	GTCTC	6 cut(s)	42, 314, 413, 929, 985, 1099
BfaI	CTAG	3 cut(s)	338, 1742, 1829
BfmI	CTRYAG	2 cut(s)	600, 1683
BfuI	GTATCC	1 cut(s)	1976
BglI	GCCNNNNNGGC	2 cut(s)	1313, 1940
BglII	AGATCT	1 cut(s)	943
BisI	GCNGC	8 cut(s)	98, 597, 600, 618, 828, 1704, 1866, 2050
BlpI	GCTNAGC	2 cut(s)	549, 1953
BlsI	GCNGC	8 cut(s)	99, 598, 601, 619, 829, 1705, 1867, 2051
BmcAI	AGTACT	1 cut(s)	210
Bme1390I	CCNGG	7 cut(s)	71, 254, 622, 1121, 1962, 2217, 2261
Bme18I	GGWCC	1 cut(s)	218
BmeT110I	CYCGRG	1 cut(s)	141
BmgT120I	GGNCC	7 cut(s)	218, 505, 908, 1909, 2152, 2236, 2270
BmiI	GGNNCC	7 cut(s)	909, 1113, 1142, 1852, 1910, 1998, 2271
BmrFI	CCNGG	7 cut(s)	71, 254, 622, 1121, 1962, 2217, 2261
BmsI	GCATC	3 cut(s)	2177, 2201, 2324
BpiI	GAAGAC	1 cut(s)	1001
BpmI	CTGGAG	1 cut(s)	236
Bpu10I	CCTNAGC	2 cut(s)	295, 1364
Bpu1102I	GCTNAGC	2 cut(s)	549, 1953
BpuEI	CTTGAG	4 cut(s)	967, 1442, 1820, 2295
BpuMI	CCSGG	2 cut(s)	1121, 2261
BsaAI	YACGTR	2 cut(s)	539, 799
BsaBI	GATNNNNATC	1 cut(s)	2034
BsaI	GGTCTC	2 cut(s)	314, 1099
BsaJI	CCNNGG	7 cut(s)	70, 304, 621, 1837, 1960, 2215, 2232
BsaXI	ACNNNNNCTCC	2 cut(s)	879, 909
Bsc4I	CCNNNNNNNGG	7 cut(s)	905, 917, 1068, 1365, 1975, 2266, 2267
Bse1I	ACTGG	1 cut(s)	373
Bse3DI	GCAATG	4 cut(s)	186, 387, 642, 1476
Bse8I	GATNNNNATC	1 cut(s)	2034
BseBI	CCWGG	5 cut(s)	71, 254, 622, 1962, 2217
BseDI	CCNNGG	7 cut(s)	70, 304, 621, 1837, 1960, 2215, 2232
BseGI	GGATG	2 cut(s)	759, 2116
BseJI	GATNNNNATC	1 cut(s)	2034
BseLI	CCNNNNNNNGG	7 cut(s)	905, 917, 1068, 1365, 1975, 2266, 2267
BseMI	GCAATG	4 cut(s)	186, 387, 642, 1476
BseMII	CTCAG	7 cut(s)	183, 460, 540, 1482, 1680, 1944, 1992
BseNI	ACTGG	1 cut(s)	373
BseRI	GAGGAG	2 cut(s)	219, 2263
BseSI	GKGCMC	1 cut(s)	2261
BseXI	GCAGC	8 cut(s)	84, 583, 586, 604, 839, 1690, 1852, 2061
BseYI	CCCAGC	1 cut(s)	1359
Bsh1285I	CGRYCG	1 cut(s)	1837
BshNI	GGYRCC	1 cut(s)	1111
BsiEI	CGRYCG	1 cut(s)	1837
BsiHKAI	GWGCWC	2 cut(s)	1488, 1959
BsiHKCI	CYCGRG	1 cut(s)	141
BsiSI	CCGG	2 cut(s)	1120, 2261
BslFI	GGGAC	4 cut(s)	246, 1096, 1572, 2220
BslI	CCNNNNNNNGG	7 cut(s)	905, 917, 1068, 1365, 1975, 2266, 2267
BsmAI	GTCTC	6 cut(s)	42, 314, 413, 929, 985, 1099
BsmBI	CGTCTC	2 cut(s)	42, 985
BsmFI	GGGAC	4 cut(s)	246, 1096, 1572, 2220
BsmI	GAATGC	2 cut(s)	1592, 2368
Bso31I	GGTCTC	2 cut(s)	314, 1099
BsoBI	CYCGRG	1 cut(s)	141
Bsp1286I	GDGCHC	4 cut(s)	1488, 1945, 1959, 2261
Bsp143I	GATC	5 cut(s)	346, 943, 1368, 1565, 2035
Bsp1720I	GCTNAGC	2 cut(s)	549, 1953
BspCNI	CTCAG	7 cut(s)	184, 459, 541, 1483, 1681, 1945, 1993
BspHI	TCATGA	1 cut(s)	769
BspLI	GGNNCC	7 cut(s)	909, 1113, 1142, 1852, 1910, 1998, 2271
BspMAI	CTGCAG	1 cut(s)	604
BspPI	GGATC	2 cut(s)	341, 1376
BspT107I	GGYRCC	1 cut(s)	1111
BspTNI	GGTCTC	2 cut(s)	314, 1099
BsrDI	GCAATG	4 cut(s)	186, 387, 642, 1476
BsrI	ACTGG	1 cut(s)	373
BssECI	CCNNGG	7 cut(s)	70, 304, 621, 1837, 1960, 2215, 2232
BssMI	GATC	5 cut(s)	346, 943, 1368, 1565, 2035
BssSI	CACGAG	3 cut(s)	180, 926, 1431
BssT1I	CCWWGG	2 cut(s)	304, 2232
Bst2BI	CACGAG	3 cut(s)	180, 926, 1431
Bst2UI	CCWGG	5 cut(s)	71, 254, 622, 1962, 2217
Bst4CI	ACNGT	7 cut(s)	283, 1087, 1838, 1894, 1922, 2026, 2345
Bst6I	CTCTTC	3 cut(s)	90, 1654, 2124
BstBAI	YACGTR	2 cut(s)	539, 799
BstC8I	GCNNGC	5 cut(s)	334, 633, 1296, 1806, 1945
BstDSI	CCRYGG	1 cut(s)	1837
BstEII	GGTNACC	1 cut(s)	1539
BstF5I	GGATG	2 cut(s)	759, 2116
BstHHI	GCGC	1 cut(s)	97
BstKTI	GATC	5 cut(s)	349, 946, 1371, 1568, 2038
BstMAI	GTCTC	6 cut(s)	42, 314, 413, 929, 985, 1099
BstMBI	GATC	5 cut(s)	346, 943, 1368, 1565, 2035
BstMCI	CGRYCG	1 cut(s)	1837
BstMWI	GCNNNNNNNGC	8 cut(s)	593, 824, 1304, 1313, 1598, 1738, 1940, 1949
BstNI	CCWGG	5 cut(s)	71, 254, 622, 1962, 2217
BstNSI	RCATGY	1 cut(s)	1808
BstPI	GGTNACC	1 cut(s)	1539
BstSCI	CCNGG	7 cut(s)	69, 252, 620, 1119, 1960, 2215, 2259
BstSFI	CTRYAG	2 cut(s)	600, 1683
BstSLI	GKGCMC	1 cut(s)	2261
BstV1I	GCAGC	8 cut(s)	84, 583, 586, 604, 839, 1690, 1852, 2061
BstV2I	GAAGAC	1 cut(s)	1001
BstX2I	RGATCY	3 cut(s)	346, 943, 1368
BstXI	CCANNNNNNTGG	1 cut(s)	2162
BstYI	RGATCY	3 cut(s)	346, 943, 1368
BsuI	GTATCC	1 cut(s)	1976
BtgI	CCRYGG	1 cut(s)	1837
BtsCI	GGATG	2 cut(s)	759, 2116
BtsI	GCAGTG	1 cut(s)	1278
BtsIMutI	CAGTG	1 cut(s)	1278
Cac8I	GCNNGC	5 cut(s)	334, 633, 1296, 1806, 1945
CaiI	CAGNNNCTG	1 cut(s)	599
CciI	TCATGA	1 cut(s)	769
CfoI	GCGC	1 cut(s)	97
Cfr13I	GGNCC	7 cut(s)	218, 505, 908, 1909, 2152, 2236, 2270
Csp6I	GTAC	8 cut(s)	209, 734, 973, 1437, 1517, 1603, 1749, 2327
CspCI	CAANNNNNGTGG	4 cut(s)	1255, 1290, 1843, 1878
CviAII	CATG	9 cut(s)	496, 770, 865, 1029, 1619, 1667, 1805, 1812, 1948
CviQI	GTAC	8 cut(s)	209, 734, 973, 1437, 1517, 1603, 1749, 2327
DpnI	GATC	5 cut(s)	348, 945, 1370, 1567, 2037
DpnII	GATC	5 cut(s)	346, 943, 1368, 1565, 2035
DrdI	GACNNNNNNGTC	1 cut(s)	30
DseDI	GACNNNNNNGTC	1 cut(s)	30
Eam1104I	CTCTTC	3 cut(s)	90, 1654, 2124
EarI	CTCTTC	3 cut(s)	90, 1654, 2124
Ecl136II	GAGCTC	1 cut(s)	1486
Eco130I	CCWWGG	2 cut(s)	304, 2232
Eco147I	AGGCCT	2 cut(s)	336, 1427
Eco24I	GRGCYC	2 cut(s)	1488, 1945
Eco31I	GGTCTC	2 cut(s)	314, 1099
Eco32I	GATATC	2 cut(s)	2019, 2292
Eco47I	GGWCC	1 cut(s)	218
Eco53kI	GAGCTC	1 cut(s)	1486
Eco57I	CTGAAG	2 cut(s)	1013, 1635
Eco88I	CYCGRG	1 cut(s)	141
Eco91I	GGTNACC	1 cut(s)	1539
EcoICRI	GAGCTC	1 cut(s)	1486
EcoO109I	RGGNCCY	1 cut(s)	2270
EcoO65I	GGTNACC	1 cut(s)	1539
EcoRI	GAATTC	3 cut(s)	1824, 2075, 2087
EcoRII	CCWGG	5 cut(s)	69, 252, 620, 1960, 2215
EcoRV	GATATC	2 cut(s)	2019, 2292
EcoT14I	CCWWGG	2 cut(s)	304, 2232
EcoT22I	ATGCAT	1 cut(s)	1668
EcoT38I	GRGCYC	2 cut(s)	1488, 1945
ErhI	CCWWGG	2 cut(s)	304, 2232
Esp3I	CGTCTC	2 cut(s)	42, 985
FaeI	CATG	9 cut(s)	499, 773, 868, 1032, 1622, 1670, 1808, 1815, 1951
FaqI	GGGAC	4 cut(s)	246, 1096, 1572, 2220
FatI	CATG	9 cut(s)	495, 769, 864, 1028, 1618, 1666, 1804, 1811, 1947
FbaI	TGATCA	1 cut(s)	2035
FblI	GTMKAC	1 cut(s)	1833
Fnu4HI	GCNGC	8 cut(s)	98, 597, 600, 618, 828, 1704, 1866, 2050
FokI	GGATG	2 cut(s)	766, 2123
FriOI	GRGCYC	2 cut(s)	1488, 1945
Fsp4HI	GCNGC	8 cut(s)	98, 597, 600, 618, 828, 1704, 1866, 2050
FspBI	CTAG	3 cut(s)	338, 1742, 1829
GlaI	GCGC	1 cut(s)	96
GluI	GCNGC	8 cut(s)	98, 597, 600, 618, 828, 1704, 1866, 2050
GsaI	CCCAGC	1 cut(s)	1363
GsuI	CTGGAG	1 cut(s)	236
HapII	CCGG	2 cut(s)	1120, 2261
HhaI	GCGC	1 cut(s)	97
Hin1II	CATG	9 cut(s)	499, 773, 868, 1032, 1622, 1670, 1808, 1815, 1951
Hin6I	GCGC	1 cut(s)	95
HinP1I	GCGC	1 cut(s)	95
HincII	GTYRAC	2 cut(s)	1786, 1834
HindII	GTYRAC	2 cut(s)	1786, 1834
HindIII	AAGCTT	1 cut(s)	2281
HinfI	GANTC	5 cut(s)	183, 402, 2100, 2114, 2170
HpaI	GTTAAC	1 cut(s)	1786
HpaII	CCGG	2 cut(s)	1120, 2261
HphI	GGTGA	3 cut(s)	86, 788, 1255
Hpy166II	GTNNAC	6 cut(s)	779, 989, 1251, 1519, 1786, 1834
Hpy188I	TCNGA	6 cut(s)	42, 162, 449, 578, 1492, 2144
Hpy188III	TCNNGA	8 cut(s)	699, 770, 1081, 1431, 1549, 1799, 2108, 2174
Hpy8I	GTNNAC	6 cut(s)	779, 989, 1251, 1519, 1786, 1834
HpyAV	CCTTC	6 cut(s)	40, 368, 767, 1524, 1727, 2128
HpyCH4III	ACNGT	7 cut(s)	283, 1087, 1838, 1894, 1922, 2026, 2345
HpyCH4IV	ACGT	5 cut(s)	538, 763, 798, 1447, 1581
HpyF10VI	GCNNNNNNNGC	8 cut(s)	593, 824, 1304, 1313, 1598, 1738, 1940, 1949
HpySE526I	ACGT	5 cut(s)	538, 763, 798, 1447, 1581
Hsp92II	CATG	9 cut(s)	499, 773, 868, 1032, 1622, 1670, 1808, 1815, 1951
HspAI	GCGC	1 cut(s)	95
Ksp22I	TGATCA	1 cut(s)	2035
KspAI	GTTAAC	1 cut(s)	1786
Kzo9I	GATC	5 cut(s)	346, 943, 1368, 1565, 2035
LmnI	GCTCC	3 cut(s)	1483, 1820, 2250
Lsp1109I	GCAGC	8 cut(s)	84, 583, 586, 604, 839, 1690, 1852, 2061
LweI	GCATC	3 cut(s)	2177, 2201, 2324
MaeI	CTAG	3 cut(s)	338, 1742, 1829
MaeII	ACGT	5 cut(s)	538, 763, 798, 1447, 1581
MaeIII	GTNAC	3 cut(s)	659, 1276, 1539
MalI	GATC	5 cut(s)	348, 945, 1370, 1567, 2037
MboI	GATC	5 cut(s)	346, 943, 1368, 1565, 2035
MfeI	CAATTG	4 cut(s)	849, 1011, 1335, 1610
MflI	RGATCY	3 cut(s)	346, 943, 1368
MhlI	GDGCHC	4 cut(s)	1488, 1945, 1959, 2261
MlyI	GAGTC	2 cut(s)	192, 2108
MmeI	TCCRAC	1 cut(s)	1801
Mph1103I	ATGCAT	1 cut(s)	1668
MroXI	GAANNNNTTC	2 cut(s)	430, 1076
MseI	TTAA	3 cut(s)	476, 606, 1785
MslI	CAYNNNNRTG	4 cut(s)	500, 774, 1102, 2165
MspA1I	CMGCKG	3 cut(s)	596, 830, 1688
MspI	CCGG	2 cut(s)	1120, 2261
MspR9I	CCNGG	7 cut(s)	71, 254, 622, 1121, 1962, 2217, 2261
MunI	CAATTG	4 cut(s)	849, 1011, 1335, 1610
Mva1269I	GAATGC	2 cut(s)	1592, 2368
MvaI	CCWGG	5 cut(s)	71, 254, 622, 1962, 2217
MwoI	GCNNNNNNNGC	8 cut(s)	593, 824, 1304, 1313, 1598, 1738, 1940, 1949
NciI	CCSGG	2 cut(s)	1121, 2261
NdeII	GATC	5 cut(s)	346, 943, 1368, 1565, 2035
NlaIII	CATG	9 cut(s)	499, 773, 868, 1032, 1622, 1670, 1808, 1815, 1951
NlaIV	GGNNCC	7 cut(s)	909, 1113, 1142, 1852, 1910, 1998, 2271
NmuCI	GTSAC	1 cut(s)	1276
NsiI	ATGCAT	1 cut(s)	1668
NspI	RCATGY	1 cut(s)	1808
PaeI	GCATGC	1 cut(s)	1808
PagI	TCATGA	1 cut(s)	769
PceI	AGGCCT	2 cut(s)	336, 1427
PcsI	WCGNNNNNNNCGW	1 cut(s)	795
PctI	GAATGC	2 cut(s)	1592, 2368
PdmI	GAANNNNTTC	2 cut(s)	430, 1076
PfeI	GAWTC	3 cut(s)	402, 2100, 2170
PfoI	TCCNGGA	1 cut(s)	1119
PkrI	GCNGC	8 cut(s)	99, 598, 601, 619, 829, 1705, 1867, 2051
PleI	GAGTC	2 cut(s)	191, 2108
PpsI	GAGTC	2 cut(s)	191, 2108
Ppu21I	YACGTR	2 cut(s)	539, 799
PsiI	TTATAA	1 cut(s)	1412
Psp124BI	GAGCTC	1 cut(s)	1488
Psp1406I	AACGTT	2 cut(s)	763, 1581
Psp6I	CCWGG	5 cut(s)	69, 252, 620, 1960, 2215
PspEI	GGTNACC	1 cut(s)	1539
PspFI	CCCAGC	1 cut(s)	1359
PspGI	CCWGG	5 cut(s)	69, 252, 620, 1960, 2215
PspN4I	GGNNCC	7 cut(s)	909, 1113, 1142, 1852, 1910, 1998, 2271
PspPI	GGNCC	7 cut(s)	218, 505, 908, 1909, 2152, 2236, 2270
PstI	CTGCAG	1 cut(s)	604
PstNI	CAGNNNCTG	1 cut(s)	599
PsuI	RGATCY	3 cut(s)	346, 943, 1368
PvuII	CAGCTG	3 cut(s)	596, 830, 1688
RsaI	GTAC	8 cut(s)	210, 735, 974, 1438, 1518, 1604, 1750, 2328
RsaNI	GTAC	8 cut(s)	209, 734, 973, 1437, 1517, 1603, 1749, 2327
RseI	CAYNNNNRTG	4 cut(s)	500, 774, 1102, 2165
SacI	GAGCTC	1 cut(s)	1488
SalI	GTCGAC	1 cut(s)	1832
SaqAI	TTAA	3 cut(s)	476, 606, 1785
SatI	GCNGC	8 cut(s)	98, 597, 600, 618, 828, 1704, 1866, 2050
Sau3AI	GATC	5 cut(s)	346, 943, 1368, 1565, 2035
Sau96I	GGNCC	7 cut(s)	218, 505, 908, 1909, 2152, 2236, 2270
ScaI	AGTACT	1 cut(s)	210
SchI	GAGTC	2 cut(s)	192, 2108
ScrFI	CCNGG	7 cut(s)	71, 254, 622, 1121, 1962, 2217, 2261
SduI	GDGCHC	4 cut(s)	1488, 1945, 1959, 2261
SfaNI	GCATC	3 cut(s)	2177, 2201, 2324
SfcI	CTRYAG	2 cut(s)	600, 1683
SinI	GGWCC	1 cut(s)	218
SmiMI	CAYNNNNRTG	4 cut(s)	500, 774, 1102, 2165
SmlI	CTYRAG	4 cut(s)	982, 1421, 1799, 2310
SmoI	CTYRAG	4 cut(s)	982, 1421, 1799, 2310
SphI	GCATGC	1 cut(s)	1808
SseBI	AGGCCT	2 cut(s)	336, 1427
SspI	AATATT	1 cut(s)	261
SspMI	CTAG	3 cut(s)	338, 1742, 1829
SstI	GAGCTC	1 cut(s)	1488
StuI	AGGCCT	2 cut(s)	336, 1427
StyD4I	CCNGG	7 cut(s)	69, 252, 620, 1119, 1960, 2215, 2259
StyI	CCWWGG	2 cut(s)	304, 2232
TaaI	ACNGT	7 cut(s)	283, 1087, 1838, 1894, 1922, 2026, 2345
TaiI	ACGT	5 cut(s)	541, 766, 801, 1450, 1584
TaqI	TCGA	3 cut(s)	1596, 1833, 2185
TatI	WGTACW	2 cut(s)	208, 972
TfiI	GAWTC	3 cut(s)	402, 2100, 2170
Tru1I	TTAA	3 cut(s)	476, 606, 1785
Tru9I	TTAA	3 cut(s)	476, 606, 1785
TscAI	CASTG	1 cut(s)	1285
TseFI	GTSAC	1 cut(s)	1276
TseI	GCWGC	8 cut(s)	97, 596, 599, 617, 827, 1703, 1865, 2049
Tsp45I	GTSAC	1 cut(s)	1276
TspDTI	ATGAA	8 cut(s)	59, 77, 423, 484, 786, 1163, 1249, 1876
TspGWI	ACGGA	5 cut(s)	24, 210, 957, 1807, 1958
TspRI	CASTG	1 cut(s)	1285
VpaK11BI	GGWCC	1 cut(s)	218
XapI	RAATTY	4 cut(s)	1414, 1824, 2075, 2087
XceI	RCATGY	1 cut(s)	1808
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1742
XmiI	GTMKAC	1 cut(s)	1833
XmnI	GAANNNNTTC	2 cut(s)	430, 1076
XspI	CTAG	3 cut(s)	338, 1742, 1829
ZrmI	AGTACT	1 cut(s)	210
Zsp2I	ATGCAT	1 cut(s)	1668

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.