Rorug07G0028600

Cation H( ) antiporter

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
2008035 .. 2011664
3630 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0028600.1

Sequence Viewer

Length: 1509 bp
ATGGACGAGGCCGAGAAACTGACGGCGTTGAAGAAGGCGTACGCGGATATAATACTTAATACGGCGAAGGAGGCAGCGGCGCGTGTAATTGTTTCGGAGAAGAGAGCTGTTCGGCTTCAAAGAGAGCTCCTTTACACTAAAGAAGAGGCGCTTCGGATGCTTCTAAGGCTTAAACACACTTATGATTCTAAGGTTGGTGAAGCAGAGATGAAGTCCTTGAGTCAACAGGGAAAGATTGATGAGCTTGAAGCACAGCTCCAGGAAGCCGAGGATATAGTGAGTGACCTTAGGGGAGAGTTGAGTGAAGTACAGGATCGACTGGAGAAGGCAAAAAAGAGACGAGCACTGGATAGGCAAAATTTAGAGGTTGATACTACTGCTCAAGAAAAGATGTCACAGAATGGACAGTGTTTTCCAGGGATGATAACATCTCAACTTAATCTTCAGGCAGATGTGGTGGCAATTAATGGCAAAAAGTTTGATTGGAATGGGACATATGAGGGCAGCAGGTGTTACATTGAATCTGATTCTCTTAGGGATCATAACTATGTTCATACTCCTGAATTTGCCTCGATAGTAATGACAAGTAAAGAGCCTGAGTTATACAGAAATGGATGCACTCAGAGAATCCGTGCTTTTGAAAGATACATGTTTGATGAAAAGTTGTCTCTTTCTGGACTAGTTGATGATGAAAAGCATGCAATATTCATCGGAGGAAATGGTGAAGGCAAAGGGATGTCTATAACACCTACACCAAAGTTTGACTATATGCATGAGGTAGAGAAGAACCTAGTAGAATTGAAAGTGAAGCATGCAGATGAGAGCCATAGGAGAGAAAAAGAACAGCTAGAAATAGAAGTACCTGCAATTTTGTCCTTCTGCAAAAAGAGAAGAACGGCCAGAAATAGAAGTACATCTCCTTCACCCACAGATCTTCCTCATCAGTTCACGGAAATGCGCCAAGTTTCTGGTTTATCCTGCTGCACTGCTTCTCCTACTTCGGTCAATGACAATGGTTTTACAGGTAATTCTGCCAAGAAATCTGAAGATAAAGTTGCAGCATCTGTTTCAAGCCCAAAGTCACCTTCAGATGCAATTGAAATGAGCTCACATTCAGCATTTGATATGGTTATTGAGAGTGAAGTACAGTTGACTAGACCCTGGACTGCTCAGAAGGAGACCAACACTGATAAGTTGTTAACTGAAGAAACTGAATTGACCAGACAAGAATGGTTATCTGCAAAAAGTTTGGAGGTTCTGGCTTGCAATGCAGATATTCAGAAAGATGAATCAGTTTTGGAAGCATCTCATTCAGATGACCTGGTCGCTAGTCAAACTGAAAGCAATAAGTTTCTCAGATATACATTCCACAGAAAGCGCAAAAGGGAGACTATGAGCATGCCTGAAACGAATTCCCAGAATGGCACTTTGGAGGGAAAGACAAGGGAGACAAAAATTGGTTCTCTGCAGCAACAGAAGTCGAGCTTGATGCCTGCATCGTCGGGATAG

Protein Analysis

502

Amino Acids

56.59

Weight (kDa)

5.83

Isoelectric Point (pI)

54.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 498
Acc36I ACCTGC 2 cut(s) 498, 871
AccII CGCG 2 cut(s) 44, 82
AciI CCGC 2 cut(s) 44, 77
AclWI GGATC 2 cut(s) 321, 546
AcoI YGGCCR 1 cut(s) 897
AcsI RAATTY 3 cut(s) 358, 563, 1411
AcuI CTGAAG 4 cut(s) 428, 1065, 1071, 1224
AfaI GTAC 5 cut(s) 41, 309, 861, 913, 1146
AflIII ACRYGT 1 cut(s) 648
AgsI TTSAA 8 cut(s) 31, 119, 248, 521, 641, 802, 1071, 1100
AhlI ACTAGT 1 cut(s) 679
AjnI CCWGG 4 cut(s) 258, 415, 1160, 1320
AjuI GAANNNNNNNTTGG 4 cut(s) 1069, 1101, 1412, 1444
AluBI AGCT 7 cut(s) 107, 127, 244, 256, 847, 1107, 1485
AluI AGCT 7 cut(s) 107, 127, 244, 256, 847, 1107, 1485
Alw21I GWGCWC 3 cut(s) 129, 346, 1109
Alw26I GTCTC 5 cut(s) 331, 672, 1172, 1382, 1442
AlwI GGATC 2 cut(s) 321, 546
AlwNI CAGNNNCTG 1 cut(s) 1064
AoxI GGCC 2 cut(s) 9, 897
ApeKI GCWGC 5 cut(s) 74, 504, 981, 1058, 1468
ApoI RAATTY 3 cut(s) 358, 563, 1411
AseI ATTAAT 1 cut(s) 465
AspLEI GCGC 4 cut(s) 82, 151, 960, 1380
AsuHPI GGTGA 4 cut(s) 209, 734, 915, 1074
AxyI CCTNAGG 1 cut(s) 287
BanII GRGCYC 2 cut(s) 129, 1109
BarI GAAGNNNNNNTAC 4 cut(s) 23, 55, 904, 936
Bbv12I GWGCWC 3 cut(s) 129, 346, 1109
BbvI GCAGC 5 cut(s) 86, 516, 968, 1070, 1480
BceAI ACGGC 3 cut(s) 39, 78, 912
BcgI CGANNNNNNTGC 2 cut(s) 1471, 1505
BciT130I CCWGG 4 cut(s) 260, 417, 1162, 1322
BcoDI GTCTC 5 cut(s) 331, 672, 1172, 1382, 1442
BcuI ACTAGT 1 cut(s) 679
BfaI CTAG 5 cut(s) 680, 791, 848, 1155, 1329
BfmI CTRYAG 1 cut(s) 1466
BfoI RGCGCY 1 cut(s) 152
BfuAI ACCTGC 2 cut(s) 498, 871
BglII AGATCT 1 cut(s) 931
BisI GCNGC 6 cut(s) 75, 78, 505, 982, 1059, 1469
BlsI GCNGC 6 cut(s) 76, 79, 506, 983, 1060, 1470
Bme1390I CCNGG 4 cut(s) 260, 417, 1162, 1322
BmrFI CCNGG 4 cut(s) 260, 417, 1162, 1322
BmsI GCATC 7 cut(s) 147, 605, 1070, 1081, 1313, 1479, 1505
BpmI CTGGAG 2 cut(s) 242, 341
BpuEI CTTGAG 2 cut(s) 238, 366
BsaI GGTCTC 1 cut(s) 1172
BsaJI CCNNGG 3 cut(s) 267, 416, 1160
BsaXI ACNNNNNCTCC 2 cut(s) 976, 1006
Bse1I ACTGG 2 cut(s) 324, 351
Bse21I CCTNAGG 1 cut(s) 287
Bse3DI GCAATG 1 cut(s) 1273
BseBI CCWGG 4 cut(s) 260, 417, 1162, 1322
BseDI CCNNGG 3 cut(s) 267, 416, 1160
BseGI GGATG 4 cut(s) 162, 426, 620, 741
BseMI GCAATG 1 cut(s) 1273
BseMII CTCAG 4 cut(s) 588, 635, 1184, 1369
BseNI ACTGG 2 cut(s) 324, 351
BseXI GCAGC 5 cut(s) 86, 516, 968, 1070, 1480
BsgI GTGCAG 1 cut(s) 967
Bsh1236I CGCG 2 cut(s) 44, 82
BshFI GGCC 2 cut(s) 11, 899
BsiHKAI GWGCWC 3 cut(s) 129, 346, 1109
BsiWI CGTACG 1 cut(s) 39
BslFI GGGAC 1 cut(s) 505
BsmAI GTCTC 5 cut(s) 331, 672, 1172, 1382, 1442
BsmBI CGTCTC 1 cut(s) 331
BsmFI GGGAC 1 cut(s) 505
BsnI GGCC 2 cut(s) 11, 899
Bso31I GGTCTC 1 cut(s) 1172
Bsp1286I GDGCHC 3 cut(s) 129, 346, 1109
Bsp143I GATC 3 cut(s) 313, 538, 931
BspACI CCGC 2 cut(s) 44, 77
BspANI GGCC 2 cut(s) 11, 899
BspCNI CTCAG 4 cut(s) 589, 634, 1183, 1368
BspFNI CGCG 2 cut(s) 44, 82
BspMAI CTGCAG 1 cut(s) 1470
BspMI ACCTGC 2 cut(s) 498, 871
BspPI GGATC 2 cut(s) 321, 546
BspTNI GGTCTC 1 cut(s) 1172
BsrDI GCAATG 1 cut(s) 1273
BsrI ACTGG 2 cut(s) 324, 351
BssECI CCNNGG 3 cut(s) 267, 416, 1160
BssMI GATC 3 cut(s) 313, 538, 931
Bst2UI CCWGG 4 cut(s) 260, 417, 1162, 1322
Bst4CI ACNGT 2 cut(s) 408, 1149
Bst6I CTCTTC 2 cut(s) 95, 138
BstC8I GCNNGC 5 cut(s) 699, 813, 1264, 1400, 1494
BstDEI CTNAG 8 cut(s) 164, 189, 287, 533, 597, 621, 1170, 1355
BstF5I GGATG 4 cut(s) 162, 426, 620, 741
BstFNI CGCG 2 cut(s) 44, 82
BstH2I RGCGCY 1 cut(s) 152
BstHHI GCGC 4 cut(s) 82, 151, 960, 1380
BstKTI GATC 3 cut(s) 316, 541, 934
BstMAI GTCTC 5 cut(s) 331, 672, 1172, 1382, 1442
BstMBI GATC 3 cut(s) 313, 538, 931
BstMWI GCNNNNNNNGC 4 cut(s) 71, 157, 166, 1268
BstNI CCWGG 4 cut(s) 260, 417, 1162, 1322
BstNSI RCATGY 4 cut(s) 652, 701, 815, 1402
BstSCI CCNGG 4 cut(s) 258, 415, 1160, 1320
BstSFI CTRYAG 1 cut(s) 1466
BstUI CGCG 2 cut(s) 44, 82
BstV1I GCAGC 5 cut(s) 86, 516, 968, 1070, 1480
BstX2I RGATCY 1 cut(s) 931
BstXI CCANNNNNNTGG 1 cut(s) 968
BstYI RGATCY 1 cut(s) 931
Bsu36I CCTNAGG 1 cut(s) 287
BsuRI GGCC 2 cut(s) 11, 899
BtsCI GGATG 4 cut(s) 162, 426, 620, 741
BtsI GCAGTG 1 cut(s) 984
BtsIMutI CAGTG 4 cut(s) 344, 413, 984, 1185
BveI ACCTGC 2 cut(s) 498, 871
Cac8I GCNNGC 5 cut(s) 699, 813, 1264, 1400, 1494
CaiI CAGNNNCTG 1 cut(s) 1064
CfoI GCGC 4 cut(s) 82, 151, 960, 1380
CsiI ACCWGGT 1 cut(s) 1320
Csp6I GTAC 5 cut(s) 40, 308, 860, 912, 1145
CviAII CATG 5 cut(s) 649, 698, 773, 812, 1399
CviQI GTAC 5 cut(s) 40, 308, 860, 912, 1145
DdeI CTNAG 8 cut(s) 164, 189, 287, 533, 597, 621, 1170, 1355
DpnI GATC 3 cut(s) 315, 540, 933
DpnII GATC 3 cut(s) 313, 538, 931
EaeI YGGCCR 1 cut(s) 897
Eam1104I CTCTTC 2 cut(s) 95, 138
EarI CTCTTC 2 cut(s) 95, 138
Ecl136II GAGCTC 2 cut(s) 127, 1107
Eco24I GRGCYC 2 cut(s) 129, 1109
Eco31I GGTCTC 1 cut(s) 1172
Eco53kI GAGCTC 2 cut(s) 127, 1107
Eco57I CTGAAG 4 cut(s) 428, 1065, 1071, 1224
Eco81I CCTNAGG 1 cut(s) 287
EcoICRI GAGCTC 2 cut(s) 127, 1107
EcoRI GAATTC 1 cut(s) 1411
EcoRII CCWGG 4 cut(s) 258, 415, 1160, 1320
EcoT22I ATGCAT 1 cut(s) 774
EcoT38I GRGCYC 2 cut(s) 129, 1109
Esp3I CGTCTC 1 cut(s) 331
FaeI CATG 5 cut(s) 652, 701, 776, 815, 1402
FalI AAGNNNNNCTT 4 cut(s) 135, 167, 1469, 1501
FaqI GGGAC 1 cut(s) 505
FatI CATG 5 cut(s) 648, 697, 772, 811, 1398
FauNDI CATATG 1 cut(s) 496
Fnu4HI GCNGC 6 cut(s) 75, 78, 505, 982, 1059, 1469
FokI GGATG 4 cut(s) 169, 433, 627, 748
FriOI GRGCYC 2 cut(s) 129, 1109
Fsp4HI GCNGC 6 cut(s) 75, 78, 505, 982, 1059, 1469
FspBI CTAG 5 cut(s) 680, 791, 848, 1155, 1329
GlaI GCGC 4 cut(s) 81, 150, 959, 1379
GluI GCNGC 6 cut(s) 75, 78, 505, 982, 1059, 1469
GsuI CTGGAG 2 cut(s) 242, 341
HaeII RGCGCY 1 cut(s) 152
HaeIII GGCC 2 cut(s) 11, 899
HhaI GCGC 4 cut(s) 82, 151, 960, 1380
Hin1II CATG 5 cut(s) 652, 701, 776, 815, 1402
Hin6I GCGC 4 cut(s) 80, 149, 958, 1378
HinP1I GCGC 4 cut(s) 80, 149, 958, 1378
HincII GTYRAC 3 cut(s) 224, 1152, 1200
HindII GTYRAC 3 cut(s) 224, 1152, 1200
HinfI GANTC 6 cut(s) 185, 220, 521, 527, 627, 1289
HpaI GTTAAC 1 cut(s) 1200
HphI GGTGA 4 cut(s) 209, 734, 915, 1074
Hpy166II GTNNAC 4 cut(s) 224, 948, 1152, 1200
Hpy188III TCNNGA 4 cut(s) 383, 560, 675, 1503
Hpy8I GTNNAC 4 cut(s) 224, 948, 1152, 1200
Hpy99I CGWCG 1 cut(s) 1504
HpyAV CCTTC 8 cut(s) 28, 61, 319, 719, 886, 930, 1095, 1168
HpyCH4III ACNGT 2 cut(s) 408, 1149
HpyF10VI GCNNNNNNNGC 4 cut(s) 71, 157, 166, 1268
HpyF3I CTNAG 8 cut(s) 164, 189, 287, 533, 597, 621, 1170, 1355
Hsp92II CATG 5 cut(s) 652, 701, 776, 815, 1402
HspAI GCGC 4 cut(s) 80, 149, 958, 1378
KspAI GTTAAC 1 cut(s) 1200
Kzo9I GATC 3 cut(s) 313, 538, 931
LmnI GCTCC 2 cut(s) 132, 261
Lsp1109I GCAGC 5 cut(s) 86, 516, 968, 1070, 1480
LweI GCATC 7 cut(s) 147, 605, 1070, 1081, 1313, 1479, 1505
MabI ACCWGGT 1 cut(s) 1320
MaeI CTAG 5 cut(s) 680, 791, 848, 1155, 1329
MaeIII GTNAC 4 cut(s) 281, 393, 512, 1080
MalI GATC 3 cut(s) 315, 540, 933
MboI GATC 3 cut(s) 313, 538, 931
MboII GAAGA 9 cut(s) 43, 112, 155, 434, 796, 903, 926, 1058, 1217
MfeI CAATTG 1 cut(s) 1095
MflI RGATCY 1 cut(s) 931
MhlI GDGCHC 3 cut(s) 129, 346, 1109
MlyI GAGTC 1 cut(s) 229
Mph1103I ATGCAT 1 cut(s) 774
MseI TTAA 5 cut(s) 57, 171, 438, 465, 1199
MslI CAYNNNNRTG 5 cut(s) 180, 546, 816, 953, 1314
MspA1I CMGCKG 1 cut(s) 77
MspR9I CCNGG 4 cut(s) 260, 417, 1162, 1322
MunI CAATTG 1 cut(s) 1095
MvaI CCWGG 4 cut(s) 260, 417, 1162, 1322
MvnI CGCG 2 cut(s) 44, 82
MwoI GCNNNNNNNGC 4 cut(s) 71, 157, 166, 1268
NdeI CATATG 1 cut(s) 496
NdeII GATC 3 cut(s) 313, 538, 931
NlaIII CATG 5 cut(s) 652, 701, 776, 815, 1402
NmeAIII GCCGAG 2 cut(s) 37, 292
NmuCI GTSAC 3 cut(s) 281, 393, 1080
NsiI ATGCAT 1 cut(s) 774
NspI RCATGY 4 cut(s) 652, 701, 815, 1402
PaeI GCATGC 3 cut(s) 701, 815, 1402
PaqCI CACCTGC 1 cut(s) 498
PciI ACATGT 1 cut(s) 648
PfeI GAWTC 5 cut(s) 185, 521, 527, 627, 1289
Pfl23II CGTACG 1 cut(s) 39
PflFI GACNNNGTC 1 cut(s) 1322
PfoI TCCNGGA 1 cut(s) 258
PkrI GCNGC 6 cut(s) 76, 79, 506, 983, 1060, 1470
PleI GAGTC 1 cut(s) 228
PpsI GAGTC 1 cut(s) 228
PscI ACATGT 1 cut(s) 648
PshBI ATTAAT 1 cut(s) 465
Psp124BI GAGCTC 2 cut(s) 129, 1109
Psp6I CCWGG 4 cut(s) 258, 415, 1160, 1320
PspGI CCWGG 4 cut(s) 258, 415, 1160, 1320
PspLI CGTACG 1 cut(s) 39
PstI CTGCAG 1 cut(s) 1470
PstNI CAGNNNCTG 1 cut(s) 1064
PsuI RGATCY 1 cut(s) 931
PsyI GACNNNGTC 1 cut(s) 1322
RsaI GTAC 5 cut(s) 41, 309, 861, 913, 1146
RsaNI GTAC 5 cut(s) 40, 308, 860, 912, 1145
RseI CAYNNNNRTG 5 cut(s) 180, 546, 816, 953, 1314
SacI GAGCTC 2 cut(s) 129, 1109
SaqAI TTAA 5 cut(s) 57, 171, 438, 465, 1199
SatI GCNGC 6 cut(s) 75, 78, 505, 982, 1059, 1469
Sau3AI GATC 3 cut(s) 313, 538, 931
SchI GAGTC 1 cut(s) 229
ScrFI CCNGG 4 cut(s) 260, 417, 1162, 1322
SduI GDGCHC 3 cut(s) 129, 346, 1109
SexAI ACCWGGT 1 cut(s) 1320
SfaNI GCATC 7 cut(s) 147, 605, 1070, 1081, 1313, 1479, 1505
SfcI CTRYAG 1 cut(s) 1466
SmiMI CAYNNNNRTG 5 cut(s) 180, 546, 816, 953, 1314
SmlI CTYRAG 2 cut(s) 217, 381
SmoI CTYRAG 2 cut(s) 217, 381
SpeI ACTAGT 1 cut(s) 679
SphI GCATGC 3 cut(s) 701, 815, 1402
SsiI CCGC 2 cut(s) 44, 77
SspI AATATT 1 cut(s) 705
SspMI CTAG 5 cut(s) 680, 791, 848, 1155, 1329
SstI GAGCTC 2 cut(s) 129, 1109
StyD4I CCNGG 4 cut(s) 258, 415, 1160, 1320
TaaI ACNGT 2 cut(s) 408, 1149
TaqI TCGA 3 cut(s) 316, 572, 1481
TaqII GACCGA 1 cut(s) 991
TatI WGTACW 3 cut(s) 307, 911, 1144
TauI GCSGC 1 cut(s) 80
TfiI GAWTC 5 cut(s) 185, 521, 527, 627, 1289
Tru1I TTAA 5 cut(s) 57, 171, 438, 465, 1199
Tru9I TTAA 5 cut(s) 57, 171, 438, 465, 1199
TscAI CASTG 4 cut(s) 351, 413, 991, 1192
TseFI GTSAC 3 cut(s) 281, 393, 1080
TseI GCWGC 5 cut(s) 74, 504, 981, 1058, 1468
Tsp45I GTSAC 3 cut(s) 281, 393, 1080
TspDTI ATGAA 6 cut(s) 224, 542, 672, 697, 705, 1302
TspGWI ACGGA 2 cut(s) 620, 965
TspRI CASTG 4 cut(s) 351, 413, 991, 1192
Tth111I GACNNNGTC 1 cut(s) 1322
VspI ATTAAT 1 cut(s) 465
XapI RAATTY 3 cut(s) 358, 563, 1411
XceI RCATGY 4 cut(s) 652, 701, 815, 1402
XspI CTAG 5 cut(s) 680, 791, 848, 1155, 1329
Zsp2I ATGCAT 1 cut(s) 774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.