Cox19-like CHCH family protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G23760 |
| fragaria_vesca | FvH4_5g03940 |
| malus_domestica | MD06G1100800.v1.1 |
| prunus_persica | Prupe.5G114300_v2.0.a1 |
| pyrus_communis | pycom06g09600 |
| rosa_chinensis | RchiOBHm_Chr7g0195561 |
| rosa_roxburghii | Rroxscaffold_3G00260360 |
| rosa_rugosa | Rorug07G0024200 |
| rosa_samantha | Rh7AG151900 Rh7BG153600 Rh7CG157100 Rh7DG152900 |
| rosa_wichuraiana | Rw7G012970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 8 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 44 |
| AluBI | AGCT | 3 cut(s) | 182, 212, 224 |
| AluI | AGCT | 3 cut(s) | 182, 212, 224 |
| AsuHPI | GGTGA | 2 cut(s) | 41, 175 |
| AsuNHI | GCTAGC | 1 cut(s) | 178 |
| BclI | TGATCA | 1 cut(s) | 184 |
| BfaI | CTAG | 1 cut(s) | 179 |
| BmrI | ACTGGG | 1 cut(s) | 120 |
| BmsI | GCATC | 1 cut(s) | 190 |
| BmtI | GCTAGC | 1 cut(s) | 182 |
| BmuI | ACTGGG | 1 cut(s) | 120 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 44 |
| Bse1I | ACTGG | 2 cut(s) | 126, 143 |
| BseGI | GGATG | 1 cut(s) | 205 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 44 |
| BseMII | CTCAG | 1 cut(s) | 164 |
| BseNI | ACTGG | 2 cut(s) | 126, 143 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 44 |
| BsmI | GAATGC | 1 cut(s) | 36 |
| Bsp143I | GATC | 1 cut(s) | 184 |
| BspACI | CCGC | 1 cut(s) | 8 |
| BspCNI | CTCAG | 1 cut(s) | 163 |
| BspHI | TCATGA | 1 cut(s) | 13 |
| BspOI | GCTAGC | 1 cut(s) | 182 |
| BsrI | ACTGG | 2 cut(s) | 126, 143 |
| BssMI | GATC | 1 cut(s) | 184 |
| BstC8I | GCNNGC | 2 cut(s) | 180, 210 |
| BstDEI | CTNAG | 1 cut(s) | 150 |
| BstEII | GGTNACC | 1 cut(s) | 47 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 42 |
| BstF5I | GGATG | 1 cut(s) | 205 |
| BstKTI | GATC | 1 cut(s) | 187 |
| BstMBI | GATC | 1 cut(s) | 184 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 209 |
| BstPI | GGTNACC | 1 cut(s) | 47 |
| BtsCI | GGATG | 1 cut(s) | 205 |
| BtsI | GCAGTG | 1 cut(s) | 21 |
| BtsIMutI | CAGTG | 2 cut(s) | 21, 150 |
| Cac8I | GCNNGC | 2 cut(s) | 180, 210 |
| CciI | TCATGA | 1 cut(s) | 13 |
| CseI | GACGC | 1 cut(s) | 23 |
| CviAII | CATG | 1 cut(s) | 14 |
| CviJI | RGCY | 5 cut(s) | 106, 182, 208, 212, 224 |
| CviKI_1 | RGCY | 5 cut(s) | 106, 182, 208, 212, 224 |
| DdeI | CTNAG | 1 cut(s) | 150 |
| DpnI | GATC | 1 cut(s) | 186 |
| DpnII | GATC | 1 cut(s) | 184 |
| Eco91I | GGTNACC | 1 cut(s) | 47 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 42 |
| EcoO65I | GGTNACC | 1 cut(s) | 47 |
| FaeI | CATG | 1 cut(s) | 17 |
| FaiI | YATR | 4 cut(s) | 15, 101, 115, 117 |
| FatI | CATG | 1 cut(s) | 13 |
| FbaI | TGATCA | 1 cut(s) | 184 |
| FokI | GGATG | 1 cut(s) | 212 |
| FspBI | CTAG | 1 cut(s) | 179 |
| HgaI | GACGC | 1 cut(s) | 23 |
| Hin1II | CATG | 1 cut(s) | 17 |
| HindIII | AAGCTT | 1 cut(s) | 222 |
| HinfI | GANTC | 1 cut(s) | 148 |
| HphI | GGTGA | 2 cut(s) | 41, 175 |
| Hpy188I | TCNGA | 1 cut(s) | 153 |
| Hpy188III | TCNNGA | 2 cut(s) | 14, 188 |
| HpyAV | CCTTC | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 2 cut(s) | 96, 203 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 209 |
| HpyF3I | CTNAG | 1 cut(s) | 150 |
| Hsp92II | CATG | 1 cut(s) | 17 |
| Ksp22I | TGATCA | 1 cut(s) | 184 |
| Kzo9I | GATC | 1 cut(s) | 184 |
| LpnPI | CCDG | 4 cut(s) | 139, 156, 173, 222 |
| LweI | GCATC | 1 cut(s) | 190 |
| MaeI | CTAG | 1 cut(s) | 179 |
| MaeIII | GTNAC | 2 cut(s) | 47, 145 |
| MalI | GATC | 1 cut(s) | 186 |
| MboI | GATC | 1 cut(s) | 184 |
| MboII | GAAGA | 1 cut(s) | 178 |
| MluCI | AATT | 2 cut(s) | 130, 154 |
| MlyI | GAGTC | 1 cut(s) | 142 |
| MnlI | CCTC | 4 cut(s) | 15, 21, 48, 69 |
| Mva1269I | GAATGC | 1 cut(s) | 36 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 209 |
| NdeII | GATC | 1 cut(s) | 184 |
| NheI | GCTAGC | 1 cut(s) | 178 |
| NlaIII | CATG | 1 cut(s) | 17 |
| NmuCI | GTSAC | 2 cut(s) | 47, 145 |
| PagI | TCATGA | 1 cut(s) | 13 |
| PctI | GAATGC | 1 cut(s) | 36 |
| PleI | GAGTC | 1 cut(s) | 142 |
| PpsI | GAGTC | 1 cut(s) | 142 |
| PspEI | GGTNACC | 1 cut(s) | 47 |
| Sau3AI | GATC | 1 cut(s) | 184 |
| SchI | GAGTC | 1 cut(s) | 142 |
| SetI | ASST | 5 cut(s) | 49, 165, 184, 214, 226 |
| SfaNI | GCATC | 1 cut(s) | 190 |
| Sse9I | AATT | 2 cut(s) | 130, 154 |
| SsiI | CCGC | 1 cut(s) | 8 |
| SspMI | CTAG | 1 cut(s) | 179 |
| TasI | AATT | 2 cut(s) | 130, 154 |
| TscAI | CASTG | 2 cut(s) | 28, 150 |
| TseFI | GTSAC | 2 cut(s) | 47, 145 |
| Tsp45I | GTSAC | 2 cut(s) | 47, 145 |
| TspDTI | ATGAA | 1 cut(s) | 152 |
| TspRI | CASTG | 2 cut(s) | 28, 150 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 42 |
| XspI | CTAG | 1 cut(s) | 179 |