FvH4_5g11270

FAS-associated factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0012942
Physical Location & Seq
Reverse (-)
6386347 .. 6389734
3388 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g11270.t1

Sequence Viewer

Length: 1395 bp
ATGAGTGAACCGAGCGACAAGTTAGCTTATTTCCAAGCGATCACCGGTCTCGAAGACTCCGATTTGTGCGTGGAGATCCTAACCGCCCATGGCTGGGACCTCGAGCTCGCGATCTCGTCCTTCACCACCACCGAGACTCACGCCCCTCCGCCTTCGCCGCCGCCAGAGAATCACGCCGCCGGCACCTCCTCCGACTCCGCCGCCGTCGTTTCTCAATCCGGATCGCCTTCGAACGCCGCCGCGCCTCCCGGCTTGGTCTGGAGGGTGATCACTCTGCCGATTTCGGTCATTTCCGGTAGTCTAGGGTTGATTTCCGGCGCGATTGGGCTGGGGATGTGGGCCGCGGGAGGCGTGCTGTCTTACTCGTTAGGGATGATCGGGCTGGGCTCCGGCCGGGGCGGCGAGGGCTCGGCGAGGTTGGTGTCGGTTTCGGCGGTGGCGACGGAGGCGATGGAGTTCGTGGCGAGTTTCGAGAGGGATTATGGGACGAGGGGGCCGAATTTCGTCGGGGAAGGGTTTATGGAGGCGTTGCAGAGGTCGAGGAACTCGTTTAAGCTGTTGTTTGTGTATTTACACTCGCCGGAGCACCCTGATACGCCGGCGTTCTGCGAGAGGACTCTGTGTTCCGAGGCCTTGGCGGCTTATATCAATGAGAACTTTGTTTCGTGGGGAGGGAGCATTCGGGCCAGTGAGGGGTTCAAGATGAGTAACAGCTTGAAGGCCTCGAGGTATCCTTTCTGTGCTGTTGTAATGGCTGCTACGAACCAGAGGATTGTGCTGCTTCAGCAGGTTGAGGGACCAAGATCTCCTGAAGAAATGCTTTCAGTACTGAACAGAGTGGTTGAAGACAGTGCTTCTGTTCTTGGTTCAGCAAGGCATGAGGCAGAAGAAAGGATAAGCAACATTCGTTTAAGAGAAGAGCAGGATGCTGCCTTTAGAGCAGCACTTGAAGCTGACCAAGCAAGGGAAACTCAGAGGAGAGAAGAGCAAGAACGCCTGGAAAGAGAAGCTGCTGAAGCTGAGAGGAAGCGTAAGGAGGAAGAAGAGGCTCGTGAAAGAGAAGCACGCGAAGCTGCTGAGAGAGAGGCAGAACGAGCTAGGATACGTCTAGAGAAGGCCTTGGCTCTTGGTGCTGAACCAGAGAAAGGACCTGATGTTACAAGGGTTTTGGTGAGGTTCCCAGGTGGAGAACGCAAGGAAAGGAGGTTTTACAGTACCACGACAATCCAGTCTCTGTATGACTATGTTGACTCTCTGGGTTGCTTAGACGTGGAGGATTACAGTCTGGTCTCTAACTTCCCTCGAGTGGTATACGGTCCAGAGAAAGCCAACTTAAACTTGAAAGAAGCAGGGTTGCATCCTCAAGCCAGCCTTTTTGTGGAGCTGAATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UBA_4 UBX

Protein Analysis

465

Amino Acids

50.59

Weight (kDa)

4.99

Isoelectric Point (pI)

44.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_4 PF14555 6 - 44 8.1e-11 UBA-like domain
FAF1 PF21021 153 - 229 1.2e-10 Fas-associated factor 1
UBX PF00789 382 - 461 4.1e-19 UBX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012942)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G10790
fragaria_vesca FvH4_5g11270
malus_domestica MD06G1114700.v1.1 MD14G1136100.v1.1
prunus_persica Prupe.5G127400_v2.0.a1
pyrus_communis pycom06g10750 pycom14g10960 pycom14g10970
rosa_chinensis RchiOBHm_Chr7g0186581
rosa_laevigata RLG00000004830
rosa_multiflora Rmu_sc0007722.1_g000020
rosa_rugosa Rorug06G0475200
rosa_samantha Rh7AG065700 Rh7BG081600 Rh7CG082100 Rh7DG083100
rosa_wichuraiana Rw7G006910 Rw7G007130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1228
AbsI CCTCGAGG 1 cut(s) 724
Acc36I ACCTGC 1 cut(s) 778
AccB1I GGYRCC 1 cut(s) 182
AccI GTMKAC 1 cut(s) 1311
AccII CGCG 5 cut(s) 110, 242, 320, 344, 1068
AccIII TCCGGA 1 cut(s) 218
AclWI GGATC 2 cut(s) 70, 229
AcoI YGGCCR 1 cut(s) 391
AcsI RAATTY 2 cut(s) 499, 1387
AcuI CTGAAG 3 cut(s) 767, 831, 1035
AfaI GTAC 2 cut(s) 828, 1216
AfiI CCNNNNNNNGG 7 cut(s) 93, 94, 693, 964, 1145, 1306, 1378
AgeI ACCGGT 1 cut(s) 44
AgsI TTSAA 5 cut(s) 700, 718, 845, 950, 1342
AjiI CACGTC 1 cut(s) 1270
AjnI CCWGG 2 cut(s) 996, 1180
AloI GAACNNNNNNTCC 2 cut(s) 607, 639
Alw21I GWGCWC 2 cut(s) 108, 588
Alw26I GTCTC 4 cut(s) 53, 128, 1236, 1294
AlwI GGATC 2 cut(s) 70, 229
AlwNI CAGNNNCTG 1 cut(s) 1234
Ama87I CYCGRG 3 cut(s) 101, 724, 1302
Aor13HI TCCGGA 1 cut(s) 218
AoxI GGCC 7 cut(s) 339, 391, 494, 630, 684, 720, 1116
ApeKI GCWGC 6 cut(s) 755, 778, 929, 941, 1010, 1073
ApoI RAATTY 2 cut(s) 499, 1387
AsiGI ACCGGT 1 cut(s) 44
AspLEI GCGC 2 cut(s) 244, 320
AspS9I GGNCC 7 cut(s) 97, 339, 494, 684, 797, 1148, 1316
AsuC2I CCSGG 2 cut(s) 249, 395
AsuHPI GGTGA 4 cut(s) 34, 115, 277, 1183
AsuII TTCGAA 1 cut(s) 230
AvaI CYCGRG 3 cut(s) 101, 724, 1302
AvaII GGWCC 4 cut(s) 97, 797, 1148, 1316
BanI GGYRCC 1 cut(s) 182
BanII GRGCYC 3 cut(s) 108, 389, 410
BauI CACGAG 1 cut(s) 1050
BbsI GAAGAC 2 cut(s) 60, 852
Bbv12I GWGCWC 2 cut(s) 108, 588
BbvI GCAGC 6 cut(s) 742, 765, 916, 953, 997, 1060
BccI CCATC 1 cut(s) 445
BceAI ACGGC 1 cut(s) 188
BciT130I CCWGG 2 cut(s) 998, 1182
BciVI GTATCC 2 cut(s) 741, 1095
BclI TGATCA 1 cut(s) 267
BcnI CCSGG 2 cut(s) 249, 395
BcoDI GTCTC 4 cut(s) 53, 128, 1236, 1294
BfaI CTAG 3 cut(s) 302, 1098, 1109
BfuAI ACCTGC 1 cut(s) 778
BfuI GTATCC 2 cut(s) 741, 1095
BglI GCCNNNNNGGC 2 cut(s) 399, 638
BglII AGATCT 1 cut(s) 803
BmcAI AGTACT 1 cut(s) 828
Bme1390I CCNGG 4 cut(s) 249, 395, 998, 1182
Bme18I GGWCC 4 cut(s) 97, 797, 1148, 1316
BmeT110I CYCGRG 3 cut(s) 101, 724, 1302
BmgBI CACGTC 1 cut(s) 1270
BmgT120I GGNCC 7 cut(s) 97, 339, 494, 684, 797, 1148, 1316
BmiI GGNNCC 6 cut(s) 98, 184, 388, 495, 798, 1178
BmrFI CCNGG 4 cut(s) 249, 395, 998, 1182
BmsI GCATC 2 cut(s) 916, 1366
BpiI GAAGAC 2 cut(s) 60, 852
BpmI CTGGAG 1 cut(s) 280
Bpu14I TTCGAA 1 cut(s) 230
BpuEI CTTGAG 1 cut(s) 1347
BpuMI CCSGG 2 cut(s) 249, 395
BsaI GGTCTC 2 cut(s) 53, 1294
BsaJI CCNNGG 7 cut(s) 88, 342, 394, 627, 633, 1119, 1180
BsaWI WCCGGW 3 cut(s) 44, 218, 293
Bsc4I CCNNNNNNNGG 7 cut(s) 93, 94, 693, 964, 1145, 1306, 1378
Bse118I RCCGGY 3 cut(s) 44, 179, 598
Bse1I ACTGG 2 cut(s) 687, 1228
BseAI TCCGGA 1 cut(s) 218
BseBI CCWGG 2 cut(s) 998, 1182
BseDI CCNNGG 7 cut(s) 88, 342, 394, 627, 633, 1119, 1180
BseGI GGATG 4 cut(s) 339, 378, 931, 1357
BseLI CCNNNNNNNGG 7 cut(s) 93, 94, 693, 964, 1145, 1306, 1378
BseMII CTCAG 3 cut(s) 986, 1011, 1068
BseNI ACTGG 2 cut(s) 687, 1228
BseRI GAGGAG 2 cut(s) 178, 991
BseX3I CGGCCG 1 cut(s) 391
BseXI GCAGC 6 cut(s) 742, 765, 916, 953, 997, 1060
BseYI CCCAGC 3 cut(s) 93, 328, 382
Bsh1236I CGCG 5 cut(s) 110, 242, 320, 344, 1068
Bsh1285I CGRYCG 1 cut(s) 394
BshFI GGCC 7 cut(s) 341, 393, 496, 632, 686, 722, 1118
BshNI GGYRCC 1 cut(s) 182
BshTI ACCGGT 1 cut(s) 44
BsiEI CGRYCG 1 cut(s) 394
BsiHKAI GWGCWC 2 cut(s) 108, 588
BsiHKCI CYCGRG 3 cut(s) 101, 724, 1302
BslFI GGGAC 3 cut(s) 110, 499, 810
BslI CCNNNNNNNGG 7 cut(s) 93, 94, 693, 964, 1145, 1306, 1378
BsmAI GTCTC 4 cut(s) 53, 128, 1236, 1294
BsmFI GGGAC 3 cut(s) 110, 499, 810
BsmI GAATGC 1 cut(s) 678
BsnI GGCC 7 cut(s) 341, 393, 496, 632, 686, 722, 1118
Bso31I GGTCTC 2 cut(s) 53, 1294
BsoBI CYCGRG 3 cut(s) 101, 724, 1302
Bsp119I TTCGAA 1 cut(s) 230
Bsp1286I GDGCHC 4 cut(s) 108, 389, 410, 588
Bsp13I TCCGGA 1 cut(s) 218
Bsp143I GATC 7 cut(s) 39, 75, 111, 221, 267, 375, 803
Bsp19I CCATGG 1 cut(s) 88
Bsp68I TCGCGA 1 cut(s) 110
BspANI GGCC 7 cut(s) 341, 393, 496, 632, 686, 722, 1118
BspCNI CTCAG 3 cut(s) 985, 1012, 1069
BspEI TCCGGA 1 cut(s) 218
BspFNI CGCG 5 cut(s) 110, 242, 320, 344, 1068
BspLI GGNNCC 6 cut(s) 98, 184, 388, 495, 798, 1178
BspMI ACCTGC 1 cut(s) 778
BspPI GGATC 2 cut(s) 70, 229
BspQI GCTCTTC 2 cut(s) 912, 978
BspT104I TTCGAA 1 cut(s) 230
BspT107I GGYRCC 1 cut(s) 182
BspTNI GGTCTC 2 cut(s) 53, 1294
BsrFI RCCGGY 3 cut(s) 44, 179, 598
BsrI ACTGG 2 cut(s) 687, 1228
BssAI RCCGGY 3 cut(s) 44, 179, 598
BssECI CCNNGG 7 cut(s) 88, 342, 394, 627, 633, 1119, 1180
BssMI GATC 7 cut(s) 39, 75, 111, 221, 267, 375, 803
BssNAI GTATAC 1 cut(s) 1312
BssSI CACGAG 1 cut(s) 1050
BssT1I CCWWGG 3 cut(s) 88, 633, 1119
Bst1107I GTATAC 1 cut(s) 1312
Bst2BI CACGAG 1 cut(s) 1050
Bst2UI CCWGG 2 cut(s) 998, 1182
Bst4CI ACNGT 4 cut(s) 851, 1214, 1283, 1316
Bst6I CTCTTC 3 cut(s) 912, 978, 1038
BstBI TTCGAA 1 cut(s) 230
BstC8I GCNNGC 6 cut(s) 108, 181, 353, 600, 1066, 1369
BstDEI CTNAG 4 cut(s) 972, 1020, 1077, 1264
BstDSI CCRYGG 2 cut(s) 88, 342
BstF5I GGATG 4 cut(s) 339, 378, 931, 1357
BstFNI CGCG 5 cut(s) 110, 242, 320, 344, 1068
BstHHI GCGC 2 cut(s) 244, 320
BstKTI GATC 7 cut(s) 42, 78, 114, 224, 270, 378, 806
BstMAI GTCTC 4 cut(s) 53, 128, 1236, 1294
BstMBI GATC 7 cut(s) 39, 75, 111, 221, 267, 375, 803
BstMCI CGRYCG 1 cut(s) 394
BstNI CCWGG 2 cut(s) 998, 1182
BstSCI CCNGG 4 cut(s) 247, 393, 996, 1180
BstUI CGCG 5 cut(s) 110, 242, 320, 344, 1068
BstV1I GCAGC 6 cut(s) 742, 765, 916, 953, 997, 1060
BstV2I GAAGAC 2 cut(s) 60, 852
BstX2I RGATCY 2 cut(s) 75, 803
BstYI RGATCY 2 cut(s) 75, 803
BstZ17I GTATAC 1 cut(s) 1312
BstZI CGGCCG 1 cut(s) 391
BsuI GTATCC 2 cut(s) 741, 1095
BsuRI GGCC 7 cut(s) 341, 393, 496, 632, 686, 722, 1118
BtgI CCRYGG 2 cut(s) 88, 342
BtgZI GCGATG 1 cut(s) 464
BtrI CACGTC 1 cut(s) 1270
BtsCI GGATG 4 cut(s) 339, 378, 931, 1357
BtsIMutI CAGTG 2 cut(s) 694, 856
BtuMI TCGCGA 1 cut(s) 110
BveI ACCTGC 1 cut(s) 778
Cac8I GCNNGC 6 cut(s) 108, 181, 353, 600, 1066, 1369
CaiI CAGNNNCTG 1 cut(s) 1234
CfoI GCGC 2 cut(s) 244, 320
Cfr10I RCCGGY 3 cut(s) 44, 179, 598
Cfr13I GGNCC 7 cut(s) 97, 339, 494, 684, 797, 1148, 1316
Cfr42I CCGCGG 1 cut(s) 345
Csp6I GTAC 2 cut(s) 827, 1215
CspAI ACCGGT 1 cut(s) 44
CviAII CATG 2 cut(s) 89, 878
CviQI GTAC 2 cut(s) 827, 1215
DdeI CTNAG 4 cut(s) 972, 1020, 1077, 1264
DpnI GATC 7 cut(s) 41, 77, 113, 223, 269, 377, 805
DpnII GATC 7 cut(s) 39, 75, 111, 221, 267, 375, 803
DrdI GACNNNNNNGTC 1 cut(s) 1228
DseDI GACNNNNNNGTC 1 cut(s) 1228
EaeI YGGCCR 1 cut(s) 391
EagI CGGCCG 1 cut(s) 391
Eam1104I CTCTTC 3 cut(s) 912, 978, 1038
EarI CTCTTC 3 cut(s) 912, 978, 1038
EciI GGCGGA 2 cut(s) 138, 187
Ecl136II GAGCTC 1 cut(s) 106
EclXI CGGCCG 1 cut(s) 391
Eco130I CCWWGG 3 cut(s) 88, 633, 1119
Eco147I AGGCCT 3 cut(s) 632, 722, 1118
Eco24I GRGCYC 3 cut(s) 108, 389, 410
Eco31I GGTCTC 2 cut(s) 53, 1294
Eco47I GGWCC 4 cut(s) 97, 797, 1148, 1316
Eco52I CGGCCG 1 cut(s) 391
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 3 cut(s) 767, 831, 1035
Eco88I CYCGRG 3 cut(s) 101, 724, 1302
EcoICRI GAGCTC 1 cut(s) 106
EcoO109I RGGNCCY 2 cut(s) 97, 1148
EcoRI GAATTC 1 cut(s) 1387
EcoRII CCWGG 2 cut(s) 996, 1180
EcoT14I CCWWGG 3 cut(s) 88, 633, 1119
EcoT38I GRGCYC 3 cut(s) 108, 389, 410
ErhI CCWWGG 3 cut(s) 88, 633, 1119
FaeI CATG 2 cut(s) 92, 881
FaiI YATR 8 cut(s) 90, 483, 521, 645, 879, 1239, 1245, 1312
FalI AAGNNNNNCTT 4 cut(s) 804, 836, 1356, 1388
FaqI GGGAC 3 cut(s) 110, 499, 810
FatI CATG 2 cut(s) 88, 877
FauI CCCGC 1 cut(s) 337
FbaI TGATCA 1 cut(s) 267
FblI GTMKAC 1 cut(s) 1311
FokI GGATG 4 cut(s) 346, 385, 938, 1344
FriOI GRGCYC 3 cut(s) 108, 389, 410
FspBI CTAG 3 cut(s) 302, 1098, 1109
GlaI GCGC 2 cut(s) 243, 319
GsaI CCCAGC 3 cut(s) 97, 332, 386
GsuI CTGGAG 1 cut(s) 280
HaeIII GGCC 7 cut(s) 341, 393, 496, 632, 686, 722, 1118
HhaI GCGC 2 cut(s) 244, 320
Hin1II CATG 2 cut(s) 92, 881
Hin6I GCGC 2 cut(s) 242, 318
HinP1I GCGC 2 cut(s) 242, 318
HincII GTYRAC 1 cut(s) 1249
HindII GTYRAC 1 cut(s) 1249
HinfI GANTC 6 cut(s) 56, 136, 169, 194, 616, 1250
HphI GGTGA 4 cut(s) 34, 115, 277, 1183
Hpy166II GTNNAC 3 cut(s) 8, 1249, 1312
Hpy188I TCNGA 4 cut(s) 61, 193, 628, 975
Hpy8I GTNNAC 3 cut(s) 8, 1249, 1312
Hpy99I CGWCG 3 cut(s) 209, 445, 509
HpyAV CCTTC 6 cut(s) 130, 162, 237, 506, 712, 1108
HpyCH4III ACNGT 4 cut(s) 851, 1214, 1283, 1316
HpyCH4IV ACGT 2 cut(s) 1105, 1269
HpyCH4V TGCA 2 cut(s) 532, 1357
HpyF3I CTNAG 4 cut(s) 972, 1020, 1077, 1264
HpySE526I ACGT 2 cut(s) 1105, 1269
Hsp92II CATG 2 cut(s) 92, 881
HspAI GCGC 2 cut(s) 242, 318
Kpn2I TCCGGA 1 cut(s) 218
KroI GCCGGC 2 cut(s) 179, 598
KroNI GCCGGC 2 cut(s) 181, 600
Ksp22I TGATCA 1 cut(s) 267
KspI CCGCGG 1 cut(s) 345
Kzo9I GATC 7 cut(s) 39, 75, 111, 221, 267, 375, 803
LguI GCTCTTC 2 cut(s) 912, 978
LmnI GCTCC 4 cut(s) 392, 583, 675, 1381
Lsp1109I GCAGC 6 cut(s) 742, 765, 916, 953, 997, 1060
LweI GCATC 2 cut(s) 916, 1366
MaeI CTAG 3 cut(s) 302, 1098, 1109
MaeII ACGT 2 cut(s) 1105, 1269
MaeIII GTNAC 2 cut(s) 707, 1156
MalI GATC 7 cut(s) 41, 77, 113, 223, 269, 377, 805
MboI GATC 7 cut(s) 39, 75, 111, 221, 267, 375, 803
MboII GAAGA 8 cut(s) 65, 824, 857, 899, 929, 995, 1052, 1055
MflI RGATCY 2 cut(s) 75, 803
MhlI GDGCHC 4 cut(s) 108, 389, 410, 588
MluCI AATT 2 cut(s) 499, 1387
MlyI GAGTC 5 cut(s) 50, 130, 188, 610, 1244
MmeI TCCRAC 1 cut(s) 216
MreI CGCCGGCG 1 cut(s) 598
MroI TCCGGA 1 cut(s) 218
MroNI GCCGGC 2 cut(s) 179, 598
MseI TTAA 3 cut(s) 552, 911, 1334
MspA1I CMGCKG 1 cut(s) 344
MspR9I CCNGG 4 cut(s) 249, 395, 998, 1182
Mva1269I GAATGC 1 cut(s) 678
MvaI CCWGG 2 cut(s) 998, 1182
MvnI CGCG 5 cut(s) 110, 242, 320, 344, 1068
NaeI GCCGGC 2 cut(s) 181, 600
NciI CCSGG 2 cut(s) 249, 395
NcoI CCATGG 1 cut(s) 88
NdeII GATC 7 cut(s) 39, 75, 111, 221, 267, 375, 803
NgoMIV GCCGGC 2 cut(s) 179, 598
NlaIII CATG 2 cut(s) 92, 881
NlaIV GGNNCC 6 cut(s) 98, 184, 388, 495, 798, 1178
NmeAIII GCCGAG 1 cut(s) 389
NruI TCGCGA 1 cut(s) 110
NspV TTCGAA 1 cut(s) 230
PaeR7I CTCGAG 3 cut(s) 101, 724, 1302
PceI AGGCCT 3 cut(s) 632, 722, 1118
PciSI GCTCTTC 2 cut(s) 912, 978
PcsI WCGNNNNNNNCGW 4 cut(s) 57, 437, 494, 545
PctI GAATGC 1 cut(s) 678
PdiI GCCGGC 2 cut(s) 181, 600
PfeI GAWTC 1 cut(s) 169
PinAI ACCGGT 1 cut(s) 44
PleI GAGTC 5 cut(s) 50, 130, 188, 610, 1244
PpsI GAGTC 5 cut(s) 50, 130, 188, 610, 1244
PpuMI RGGWCCY 2 cut(s) 97, 1148
Psp124BI GAGCTC 1 cut(s) 108
Psp5II RGGWCCY 2 cut(s) 97, 1148
Psp6I CCWGG 2 cut(s) 996, 1180
PspFI CCCAGC 3 cut(s) 93, 328, 382
PspGI CCWGG 2 cut(s) 996, 1180
PspN4I GGNNCC 6 cut(s) 98, 184, 388, 495, 798, 1178
PspPI GGNCC 7 cut(s) 97, 339, 494, 684, 797, 1148, 1316
PspPPI RGGWCCY 2 cut(s) 97, 1148
PspXI VCTCGAGB 3 cut(s) 101, 724, 1302
PstNI CAGNNNCTG 1 cut(s) 1234
PsuI RGATCY 2 cut(s) 75, 803
RruI TCGCGA 1 cut(s) 110
RsaI GTAC 2 cut(s) 828, 1216
RsaNI GTAC 2 cut(s) 827, 1215
SacI GAGCTC 1 cut(s) 108
SacII CCGCGG 1 cut(s) 345
SapI GCTCTTC 2 cut(s) 912, 978
SaqAI TTAA 3 cut(s) 552, 911, 1334
Sau3AI GATC 7 cut(s) 39, 75, 111, 221, 267, 375, 803
Sau96I GGNCC 7 cut(s) 97, 339, 494, 684, 797, 1148, 1316
ScaI AGTACT 1 cut(s) 828
SchI GAGTC 5 cut(s) 50, 130, 188, 610, 1244
ScrFI CCNGG 4 cut(s) 249, 395, 998, 1182
SduI GDGCHC 4 cut(s) 108, 389, 410, 588
SfaNI GCATC 2 cut(s) 916, 1366
Sfr274I CTCGAG 3 cut(s) 101, 724, 1302
Sfr303I CCGCGG 1 cut(s) 345
SfuI TTCGAA 1 cut(s) 230
SgrAI CRCCGGYG 1 cut(s) 598
SgrBI CCGCGG 1 cut(s) 345
SinI GGWCC 4 cut(s) 97, 797, 1148, 1316
SlaI CTCGAG 3 cut(s) 101, 724, 1302
SmlI CTYRAG 4 cut(s) 101, 724, 1302, 1362
SmoI CTYRAG 4 cut(s) 101, 724, 1302, 1362
Sse9I AATT 2 cut(s) 499, 1387
SseBI AGGCCT 3 cut(s) 632, 722, 1118
SspMI CTAG 3 cut(s) 302, 1098, 1109
SstI GAGCTC 1 cut(s) 108
StuI AGGCCT 3 cut(s) 632, 722, 1118
StyD4I CCNGG 4 cut(s) 247, 393, 996, 1180
StyI CCWWGG 3 cut(s) 88, 633, 1119
TaaI ACNGT 4 cut(s) 851, 1214, 1283, 1316
TaiI ACGT 2 cut(s) 1108, 1272
TaqI TCGA 7 cut(s) 51, 102, 230, 471, 539, 725, 1303
TaqII GACCGA 1 cut(s) 274
TasI AATT 2 cut(s) 499, 1387
TatI WGTACW 1 cut(s) 826
TauI GCSGC 9 cut(s) 160, 163, 179, 203, 239, 242, 344, 402, 641
TfiI GAWTC 1 cut(s) 169
Tru1I TTAA 3 cut(s) 552, 911, 1334
Tru9I TTAA 3 cut(s) 552, 911, 1334
TscAI CASTG 2 cut(s) 694, 856
TseI GCWGC 6 cut(s) 755, 778, 929, 941, 1010, 1073
TspGWI ACGGA 1 cut(s) 458
TspRI CASTG 2 cut(s) 694, 856
VpaK11BI GGWCC 4 cut(s) 97, 797, 1148, 1316
XapI RAATTY 2 cut(s) 499, 1387
XbaI TCTAGA 1 cut(s) 1108
XcmI CCANNNNNNNNNTGG 1 cut(s) 1375
XhoI CTCGAG 3 cut(s) 101, 724, 1302
XmiI GTMKAC 1 cut(s) 1311
XspI CTAG 3 cut(s) 302, 1098, 1109
ZrmI AGTACT 1 cut(s) 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.