Rorug06G0475200

Zinc finger HIT domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0002495
Physical Location & Seq
Reverse (-)
59757747 .. 59762846
5100 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0475200.1

Sequence Viewer

Length: 2142 bp
ATGCAAGGGCAGAGGGGTACTATCGGTTCCTTGCCTGAAATGCTAGATTTTGACCATGGGAATACGTCGAATGATGCTGCTTTAGATCAGCAGATTTGCTGGAATGGCACGCGGAATCCTGTAGAAAATCGGATTCCTGACTATATACAATCACCTACTGATATGAATGTTGGTTTTGGGAATTCCATTGGTCGTGAACGTCAGAACTTAGGCAGATGGTGCTTAGGTGAGCCTAGTTCTAGAAACTCACAGGGTGAAGTAAGTCGTGATGAGCGGAAACCAGATTTTGGATGGTCATCTTCAGTGGATGCTTGTGGTGAAGCTGGTCTGAGGTTAGAGGAGCGGCGCTATGAACCAACTAATAACCTTTCACTGGACAACAATGTGAATACTATTTTTACACCAAGTTCCAATTCTGATGCAGCTTCACAGCATCTGAACTTGAATGCAGGTTTCACTGGTCATGGTGGTGATAGTAGTCAAGTTATGGAATGTCCTAACACATACAAGTATAATGTCACCGAAAATGAGCAGACTCGTCCTACTGGTAATTCTGATCCTTTTCTGCTTCCTGCTGCAACTACTGGATTTGTAGTGGGAGAAAATGATGGCAGACCCGGTTGTTCATTGGAGGGTCGCCGCGTATCTTGCAAAAGAAAGACTATGGAGGGACATTTAGGACAGTCTTCTTTAAGTGGAAGTTGTAGTTACTTTCAGCATACAGAAAGTGGTGCAAGGCCTTCTGTCCCTGCTCACTATAATGCAGGCATAAACATATCTACTCCATCACAAGAGGGAAATCCAAGACCTGGAGCAGGTGGTAGAGAACTTACTTCTGACAGCATTCCTGATTCAAATGTTGGAAGAAGCTCAGAAAGTTCTCACAGAAACTTCCGTGTGAGAATAAATCCATCCAATCAACAAAACACTATACCCTCAACTAGGTTCTCAAGTGGGAGGGCTGCTAGGCATTCTAGTGGTTCTTCTTCGCAGCATTCACCTGGTCTTCTTCCAGTTGATCATAGTCTCGACCTGCGACCAGCACCGGTACTAGATAATATGAGTTCACAAAACCAGCCAGTTGTCCATGTCCCTGCATTGCCACAAAATGCGCAGTCTTTGAGGTGGAACAGTGGTTCAAGCTCAAGAACCGGTGGCTTATCAAACTCTGTGTTTATGGGGGACAGAGATGCTCCACTACGTGAGGAAGCGAGTTCAAGAAGCATGGCCAGACAGATTTTGGGTCATCCTATTTTTGTACCAGCAACTGAATTGAGGAATTCTGCTAGACTTTCAGCAGGTTCATCCAGTAGAAATTTAACAGGTGGAAATGCAAGTATTCCTGGAAATGTTGCTTCTACATCCCGGACCGGCCCAAGTTCAAGCACTCATCCAGCGTCTGCTCCTACATGGGTTCCTCACCACAATTCTCATCCGCAATTTCCTCGAAGATTATCTGAATATGTTCGTCGATCATTGTTTTCTGCTGGTGGTAATGAGTCTGGGAACCAGGGCAGCAACTTTTTGCCAATGCGTTCTGGTTCTTCATCATCACAGGAGGCTGTGCATTCATCCGGAGCTGCTAACCTGGGTCATCATCAGCCTCACCCAAGGTCTGCATCGTGGTTGGAGAGACATGGAGATGGACTTGGGCTTCCCTATTCATTGCGCACTTTGGCTGCTGGTGGAGAAGGAAACAACAGGCTTGTATCTGAGATTTGCAATGTCTTGGGTCTCATGCGAAGGGGCGAGAGCTTGCGGTTCGAGGATGTTATGATTCTTGACCAGTCGATGCTGTTTGGAGTGGCTGATATTCATGACCGGCATAGGGATATGAGACTAGATGTTGACAATATGTCTTACGAGGAGTTATTGGCTCTGGAAGAGCGCATTGGAAATGTGAACACTGGATTGAGTGAAGAAATTATATCGAATCGCTTGAAACATAAGAAGTATATTGCCGAGGCATCTCAAGCAGAGACGGAGACGGAGCCTTGTTGTATATGTCAGGAGGAATATAATGAAGGAGATGATCTTGGAATGCTTGAATGTGGGCATGATTTCCATAGCGACTGCATCAAACAATGGCTGACGCACAAGAATCTGTGCCCCATTTGTAAAACTACAGCCTTGGCAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SHQ1 zf-HIT

Protein Analysis

713

Amino Acids

77.29

Weight (kDa)

6.09

Isoelectric Point (pI)

58.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 663 - 707 8e-09 RING-H2 zinc finger domain
zf-RING_2 PF13639 666 - 707 1.1e-12 Ring finger domain
zf-C3HC4_2 PF13923 666 - 706 8.4e-09 Zinc finger, C3HC4 type (RING finger)
zf-RING_11 PF17123 666 - 693 5.2e-07 RING-like zinc finger
zf-C3HC4 PF00097 666 - 706 4.9e-07 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 666 - 704 1.6e-06 RING-type zinc-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 806
Acc16I TGCGCA 2 cut(s) 1113, 1670
Acc36I ACCTGC 4 cut(s) 440, 806, 1041, 1289
AccB7I CCANNNNNTGG 2 cut(s) 287, 809
AccBSI CCGCTC 2 cut(s) 274, 343
AccII CGCG 2 cut(s) 112, 642
AccIII TCCGGA 1 cut(s) 1574
AciI CCGC 6 cut(s) 112, 274, 343, 640, 1436, 1759
AclWI GGATC 1 cut(s) 551
AcoI YGGCCR 1 cut(s) 1227
AcsI RAATTY 3 cut(s) 181, 1279, 1315
AcuI CTGAAG 1 cut(s) 285
AdeI CACNNNGTG 2 cut(s) 254, 1202
AfaI GTAC 3 cut(s) 19, 1050, 1260
AfiI CCNNNNNNNGG 6 cut(s) 287, 373, 809, 815, 942, 1828
AgeI ACCGGT 2 cut(s) 1045, 1151
AgsI TTSAA 7 cut(s) 445, 855, 1140, 1218, 1383, 1942, 2048
AhdI GACNNNNNGTC 1 cut(s) 1855
AjnI CCWGG 5 cut(s) 808, 1000, 1342, 1509, 1587
AjuI GAANNNNNNNTTGG 4 cut(s) 397, 429, 1875, 1907
AloI GAACNNNNNNTCC 2 cut(s) 1120, 1152
AluBI AGCT 6 cut(s) 323, 425, 870, 1143, 1580, 1755
AluI AGCT 6 cut(s) 323, 425, 870, 1143, 1580, 1755
Alw26I GTCTC 6 cut(s) 1031, 1627, 1739, 1831, 1973, 1979
AlwI GGATC 1 cut(s) 551
AlwNI CAGNNNCTG 3 cut(s) 436, 1268, 1400
Aor13HI TCCGGA 1 cut(s) 1574
AoxI GGCC 3 cut(s) 737, 1227, 1372
ApeKI GCWGC 8 cut(s) 77, 422, 575, 962, 991, 1515, 1580, 1679
ApoI RAATTY 3 cut(s) 181, 1279, 1315
AsiGI ACCGGT 2 cut(s) 1045, 1151
Asp700I GAANNNNTTC 1 cut(s) 1464
AspLEI GCGC 4 cut(s) 348, 1114, 1671, 1890
AspS9I GGNCC 2 cut(s) 1368, 1373
AsuC2I CCSGG 2 cut(s) 618, 1366
AsuHPI GGTGA 9 cut(s) 144, 239, 266, 329, 482, 511, 990, 1412, 1598
AvaII GGWCC 1 cut(s) 1368
BaeGI GKGCMC 1 cut(s) 2111
BalI TGGCCA 1 cut(s) 1229
BbsI GAAGAC 2 cut(s) 678, 998
BbvI GCAGC 8 cut(s) 64, 434, 562, 949, 1003, 1527, 1567, 1666
BccI CCATC 6 cut(s) 210, 285, 602, 793, 919, 1637
BcgI CGANNNNNNTGC 2 cut(s) 1427, 1461
BciT130I CCWGG 5 cut(s) 810, 1002, 1344, 1511, 1589
BclI TGATCA 1 cut(s) 1018
BcnI CCSGG 2 cut(s) 618, 1366
BcoDI GTCTC 6 cut(s) 1031, 1627, 1739, 1831, 1973, 1979
BfaI CTAG 9 cut(s) 44, 234, 240, 942, 966, 975, 1052, 1287, 1841
BfmI CTRYAG 2 cut(s) 120, 2124
BfoI RGCGCY 1 cut(s) 349
BfuAI ACCTGC 4 cut(s) 440, 806, 1041, 1289
Bme1390I CCNGG 7 cut(s) 618, 810, 1002, 1344, 1366, 1511, 1589
Bme18I GGWCC 1 cut(s) 1368
BmeRI GACNNNNNGTC 1 cut(s) 1855
BmgT120I GGNCC 2 cut(s) 1368, 1373
BmiI GGNNCC 4 cut(s) 28, 1416, 1508, 1992
BmrFI CCNGG 7 cut(s) 618, 810, 1002, 1344, 1366, 1511, 1589
BmsI GCATC 9 cut(s) 64, 298, 409, 442, 1180, 1628, 1782, 1976, 2085
BpiI GAAGAC 2 cut(s) 678, 998
BpmI CTGGAG 1 cut(s) 831
Bpu10I CCTNAGC 1 cut(s) 223
BpuEI CTTGAG 3 cut(s) 934, 1129, 1956
BpuMI CCSGG 2 cut(s) 618, 1366
BsaAI YACGTR 1 cut(s) 1202
BsaBI GATNNNNATC 1 cut(s) 295
BsaI GGTCTC 1 cut(s) 1739
BsaJI CCNNGG 6 cut(s) 55, 1510, 1588, 1610, 1962, 2130
BsaWI WCCGGW 3 cut(s) 1045, 1151, 1574
Bsc4I CCNNNNNNNGG 6 cut(s) 287, 373, 809, 815, 942, 1828
Bse118I RCCGGY 4 cut(s) 1045, 1151, 1370, 1821
Bse1I ACTGG 9 cut(s) 378, 463, 550, 589, 1013, 1079, 1308, 1786, 1912
Bse3DI GCAATG 3 cut(s) 1097, 1664, 1729
Bse8I GATNNNNATC 1 cut(s) 295
BseAI TCCGGA 1 cut(s) 1574
BseBI CCWGG 5 cut(s) 810, 1002, 1344, 1511, 1589
BseDI CCNNGG 6 cut(s) 55, 1510, 1588, 1610, 1962, 2130
BseJI GATNNNNATC 1 cut(s) 295
BseLI CCNNNNNNNGG 6 cut(s) 287, 373, 809, 815, 942, 1828
BseMI GCAATG 3 cut(s) 1097, 1664, 1729
BseMII CTCAG 3 cut(s) 320, 885, 1704
BseNI ACTGG 9 cut(s) 378, 463, 550, 589, 1013, 1079, 1308, 1786, 1912
BseRI GAGGAG 2 cut(s) 353, 1880
BseSI GKGCMC 1 cut(s) 2111
BseXI GCAGC 8 cut(s) 64, 434, 562, 949, 1003, 1527, 1567, 1666
Bsh1236I CGCG 2 cut(s) 112, 642
BshFI GGCC 3 cut(s) 739, 1229, 1374
BshTI ACCGGT 2 cut(s) 1045, 1151
BsiSI CCGG 7 cut(s) 618, 1046, 1152, 1366, 1371, 1575, 1822
BslFI GGGAC 4 cut(s) 684, 731, 1076, 1196
BslI CCNNNNNNNGG 6 cut(s) 287, 373, 809, 815, 942, 1828
BsmAI GTCTC 6 cut(s) 1031, 1627, 1739, 1831, 1973, 1979
BsmBI CGTCTC 2 cut(s) 1973, 1979
BsmFI GGGAC 4 cut(s) 684, 731, 1076, 1196
BsmI GAATGC 6 cut(s) 451, 843, 970, 994, 1567, 2046
BsnI GGCC 3 cut(s) 739, 1229, 1374
Bso31I GGTCTC 1 cut(s) 1739
Bsp1286I GDGCHC 1 cut(s) 2111
Bsp13I TCCGGA 1 cut(s) 1574
Bsp143I GATC 5 cut(s) 85, 556, 1018, 1472, 2032
Bsp19I CCATGG 1 cut(s) 55
BspACI CCGC 6 cut(s) 112, 274, 343, 640, 1436, 1759
BspANI GGCC 3 cut(s) 739, 1229, 1374
BspCNI CTCAG 3 cut(s) 321, 884, 1705
BspEI TCCGGA 1 cut(s) 1574
BspFNI CGCG 2 cut(s) 112, 642
BspHI TCATGA 1 cut(s) 1816
BspLI GGNNCC 4 cut(s) 28, 1416, 1508, 1992
BspMI ACCTGC 4 cut(s) 440, 806, 1041, 1289
BspPI GGATC 1 cut(s) 551
BspQI GCTCTTC 1 cut(s) 1878
BspTNI GGTCTC 1 cut(s) 1739
BsrBI CCGCTC 2 cut(s) 274, 343
BsrDI GCAATG 3 cut(s) 1097, 1664, 1729
BsrFI RCCGGY 4 cut(s) 1045, 1151, 1370, 1821
BsrI ACTGG 9 cut(s) 378, 463, 550, 589, 1013, 1079, 1308, 1786, 1912
BssAI RCCGGY 4 cut(s) 1045, 1151, 1370, 1821
BssECI CCNNGG 6 cut(s) 55, 1510, 1588, 1610, 1962, 2130
BssMI GATC 5 cut(s) 85, 556, 1018, 1472, 2032
BssT1I CCWWGG 3 cut(s) 55, 1610, 2130
Bst2UI CCWGG 5 cut(s) 810, 1002, 1344, 1511, 1589
Bst4CI ACNGT 2 cut(s) 684, 1133
Bst6I CTCTTC 1 cut(s) 1878
BstAPI GCANNNNNTGC 1 cut(s) 219
BstBAI YACGTR 1 cut(s) 1202
BstC8I GCNNGC 3 cut(s) 110, 766, 1757
BstDEI CTNAG 5 cut(s) 208, 223, 329, 871, 1713
BstDSI CCRYGG 1 cut(s) 55
BstENI CCTNNNNNAGG 2 cut(s) 813, 940
BstFNI CGCG 2 cut(s) 112, 642
BstH2I RGCGCY 1 cut(s) 349
BstHHI GCGC 4 cut(s) 348, 1114, 1671, 1890
BstKTI GATC 5 cut(s) 88, 559, 1021, 1475, 2035
BstMAI GTCTC 6 cut(s) 1031, 1627, 1739, 1831, 1973, 1979
BstMBI GATC 5 cut(s) 85, 556, 1018, 1472, 2032
BstMWI GCNNNNNNNGC 5 cut(s) 40, 105, 219, 648, 1973
BstNI CCWGG 5 cut(s) 810, 1002, 1344, 1511, 1589
BstSCI CCNGG 7 cut(s) 616, 808, 1000, 1342, 1364, 1509, 1587
BstSFI CTRYAG 2 cut(s) 120, 2124
BstSLI GKGCMC 1 cut(s) 2111
BstUI CGCG 2 cut(s) 112, 642
BstV1I GCAGC 8 cut(s) 64, 434, 562, 949, 1003, 1527, 1567, 1666
BstV2I GAAGAC 2 cut(s) 678, 998
BsuRI GGCC 3 cut(s) 739, 1229, 1374
BtgI CCRYGG 1 cut(s) 55
BtsIMutI CAGTG 5 cut(s) 309, 371, 456, 1138, 1905
BveI ACCTGC 4 cut(s) 440, 806, 1041, 1289
Cac8I GCNNGC 3 cut(s) 110, 766, 1757
CaiI CAGNNNCTG 3 cut(s) 436, 1268, 1400
CciI TCATGA 1 cut(s) 1816
CfoI GCGC 4 cut(s) 348, 1114, 1671, 1890
Cfr10I RCCGGY 4 cut(s) 1045, 1151, 1370, 1821
Cfr13I GGNCC 2 cut(s) 1368, 1373
CpoI CGGWCCG 1 cut(s) 1368
CseI GACGC 2 cut(s) 1386, 2101
CsiI ACCWGGT 1 cut(s) 1000
Csp6I GTAC 3 cut(s) 18, 1049, 1259
CspAI ACCGGT 2 cut(s) 1045, 1151
CspI CGGWCCG 1 cut(s) 1368
CviQI GTAC 3 cut(s) 18, 1049, 1259
DdeI CTNAG 5 cut(s) 208, 223, 329, 871, 1713
DpnI GATC 5 cut(s) 87, 558, 1020, 1474, 2034
DpnII GATC 5 cut(s) 85, 556, 1018, 1472, 2032
DraIII CACNNNGTG 2 cut(s) 254, 1202
DriI GACNNNNNGTC 1 cut(s) 1855
EaeI YGGCCR 1 cut(s) 1227
Eam1104I CTCTTC 1 cut(s) 1878
Eam1105I GACNNNNNGTC 1 cut(s) 1855
EarI CTCTTC 1 cut(s) 1878
Eco130I CCWWGG 3 cut(s) 55, 1610, 2130
Eco147I AGGCCT 1 cut(s) 739
Eco31I GGTCTC 1 cut(s) 1739
Eco47I GGWCC 1 cut(s) 1368
Eco57I CTGAAG 1 cut(s) 285
EcoNI CCTNNNNNAGG 2 cut(s) 813, 940
EcoRI GAATTC 2 cut(s) 181, 1279
EcoRII CCWGG 5 cut(s) 808, 1000, 1342, 1509, 1587
EcoT14I CCWWGG 3 cut(s) 55, 1610, 2130
ErhI CCWWGG 3 cut(s) 55, 1610, 2130
Esp3I CGTCTC 2 cut(s) 1973, 1979
FaqI GGGAC 4 cut(s) 684, 731, 1076, 1196
FbaI TGATCA 1 cut(s) 1018
FspBI CTAG 9 cut(s) 44, 234, 240, 942, 966, 975, 1052, 1287, 1841
FspI TGCGCA 2 cut(s) 1113, 1670
GlaI GCGC 4 cut(s) 347, 1113, 1670, 1889
GsuI CTGGAG 1 cut(s) 831
HaeII RGCGCY 1 cut(s) 349
HaeIII GGCC 3 cut(s) 739, 1229, 1374
HapII CCGG 7 cut(s) 618, 1046, 1152, 1366, 1371, 1575, 1822
HgaI GACGC 2 cut(s) 1386, 2101
HhaI GCGC 4 cut(s) 348, 1114, 1671, 1890
Hin6I GCGC 4 cut(s) 346, 1112, 1669, 1888
HinP1I GCGC 4 cut(s) 346, 1112, 1669, 1888
HincII GTYRAC 1 cut(s) 1849
HindII GTYRAC 1 cut(s) 1849
HinfI GANTC 8 cut(s) 115, 133, 535, 851, 1499, 1777, 1933, 2101
HpaII CCGG 7 cut(s) 618, 1046, 1152, 1366, 1371, 1575, 1822
HphI GGTGA 9 cut(s) 144, 239, 266, 329, 482, 511, 990, 1412, 1598
Hpy166II GTNNAC 4 cut(s) 197, 1067, 1849, 1903
Hpy8I GTNNAC 4 cut(s) 197, 1067, 1849, 1903
Hpy99I CGWCG 2 cut(s) 70, 1473
HpyAV CCTTC 4 cut(s) 750, 1685, 1737, 2018
HpyCH4III ACNGT 2 cut(s) 684, 1133
HpyCH4IV ACGT 3 cut(s) 65, 199, 1201
HpyF10VI GCNNNNNNNGC 5 cut(s) 40, 105, 219, 648, 1973
HpyF3I CTNAG 5 cut(s) 208, 223, 329, 871, 1713
HpySE526I ACGT 3 cut(s) 65, 199, 1201
HspAI GCGC 4 cut(s) 346, 1112, 1669, 1888
Kpn2I TCCGGA 1 cut(s) 1574
Ksp22I TGATCA 1 cut(s) 1018
Kzo9I GATC 5 cut(s) 85, 556, 1018, 1472, 2032
LguI GCTCTTC 1 cut(s) 1878
LmnI GCTCC 6 cut(s) 340, 812, 1198, 1408, 1577, 1990
Lsp1109I GCAGC 8 cut(s) 64, 434, 562, 949, 1003, 1527, 1567, 1666
LweI GCATC 9 cut(s) 64, 298, 409, 442, 1180, 1628, 1782, 1976, 2085
MabI ACCWGGT 1 cut(s) 1000
MaeI CTAG 9 cut(s) 44, 234, 240, 942, 966, 975, 1052, 1287, 1841
MaeII ACGT 3 cut(s) 65, 199, 1201
MaeIII GTNAC 2 cut(s) 517, 707
MalI GATC 5 cut(s) 87, 558, 1020, 1474, 2034
MbiI CCGCTC 2 cut(s) 274, 343
MboI GATC 5 cut(s) 85, 556, 1018, 1472, 2032
MhlI GDGCHC 1 cut(s) 2111
MlsI TGGCCA 1 cut(s) 1229
MluCI AATT 9 cut(s) 181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1923
MluNI TGGCCA 1 cut(s) 1229
MlyI GAGTC 2 cut(s) 529, 1508
MmeI TCCRAC 2 cut(s) 841, 1608
Mox20I TGGCCA 1 cut(s) 1229
MroI TCCGGA 1 cut(s) 1574
MroXI GAANNNNTTC 1 cut(s) 1464
MscI TGGCCA 1 cut(s) 1229
MseI TTAA 2 cut(s) 692, 1319
MslI CAYNNNNRTG 4 cut(s) 468, 759, 975, 1641
Msp20I TGGCCA 1 cut(s) 1229
MspI CCGG 7 cut(s) 618, 1046, 1152, 1366, 1371, 1575, 1822
MspR9I CCNGG 7 cut(s) 618, 810, 1002, 1344, 1366, 1511, 1589
Mva1269I GAATGC 6 cut(s) 451, 843, 970, 994, 1567, 2046
MvaI CCWGG 5 cut(s) 810, 1002, 1344, 1511, 1589
MvnI CGCG 2 cut(s) 112, 642
MwoI GCNNNNNNNGC 5 cut(s) 40, 105, 219, 648, 1973
NciI CCSGG 2 cut(s) 618, 1366
NcoI CCATGG 1 cut(s) 55
NdeII GATC 5 cut(s) 85, 556, 1018, 1472, 2032
NlaIV GGNNCC 4 cut(s) 28, 1416, 1508, 1992
NmeAIII GCCGAG 1 cut(s) 1987
NmuCI GTSAC 1 cut(s) 517
NsbI TGCGCA 2 cut(s) 1113, 1670
PagI TCATGA 1 cut(s) 1816
PaqCI CACCTGC 1 cut(s) 806
PceI AGGCCT 1 cut(s) 739
PciSI GCTCTTC 1 cut(s) 1878
PctI GAATGC 6 cut(s) 451, 843, 970, 994, 1567, 2046
PdmI GAANNNNTTC 1 cut(s) 1464
PfeI GAWTC 6 cut(s) 115, 133, 851, 1777, 1933, 2101
PflMI CCANNNNNTGG 2 cut(s) 287, 809
PfoI TCCNGGA 2 cut(s) 1342, 1364
PinAI ACCGGT 2 cut(s) 1045, 1151
PleI GAGTC 2 cut(s) 529, 1507
PpsI GAGTC 2 cut(s) 529, 1507
Ppu21I YACGTR 1 cut(s) 1202
Psp6I CCWGG 5 cut(s) 808, 1000, 1342, 1509, 1587
PspGI CCWGG 5 cut(s) 808, 1000, 1342, 1509, 1587
PspN4I GGNNCC 4 cut(s) 28, 1416, 1508, 1992
PspPI GGNCC 2 cut(s) 1368, 1373
PsrI GAACNNNNNNTAC 2 cut(s) 10, 42
PstNI CAGNNNCTG 3 cut(s) 436, 1268, 1400
RsaI GTAC 3 cut(s) 19, 1050, 1260
RsaNI GTAC 3 cut(s) 18, 1049, 1259
RseI CAYNNNNRTG 4 cut(s) 468, 759, 975, 1641
Rsr2I CGGWCCG 1 cut(s) 1368
RsrII CGGWCCG 1 cut(s) 1368
SapI GCTCTTC 1 cut(s) 1878
SaqAI TTAA 2 cut(s) 692, 1319
Sau3AI GATC 5 cut(s) 85, 556, 1018, 1472, 2032
Sau96I GGNCC 2 cut(s) 1368, 1373
SchI GAGTC 2 cut(s) 529, 1508
ScrFI CCNGG 7 cut(s) 618, 810, 1002, 1344, 1366, 1511, 1589
SduI GDGCHC 1 cut(s) 2111
SexAI ACCWGGT 1 cut(s) 1000
SfaNI GCATC 9 cut(s) 64, 298, 409, 442, 1180, 1628, 1782, 1976, 2085
SfcI CTRYAG 2 cut(s) 120, 2124
SinI GGWCC 1 cut(s) 1368
SmiMI CAYNNNNRTG 4 cut(s) 468, 759, 975, 1641
SmlI CTYRAG 3 cut(s) 949, 1144, 1971
SmoI CTYRAG 3 cut(s) 949, 1144, 1971
Sse9I AATT 9 cut(s) 181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1923
SseBI AGGCCT 1 cut(s) 739
SsiI CCGC 6 cut(s) 112, 274, 343, 640, 1436, 1759
SspMI CTAG 9 cut(s) 44, 234, 240, 942, 966, 975, 1052, 1287, 1841
StuI AGGCCT 1 cut(s) 739
StyD4I CCNGG 7 cut(s) 616, 808, 1000, 1342, 1364, 1509, 1587
StyI CCWWGG 3 cut(s) 55, 1610, 2130
TaaI ACNGT 2 cut(s) 684, 1133
TaiI ACGT 3 cut(s) 68, 202, 1204
TaqI TCGA 7 cut(s) 68, 1029, 1447, 1471, 1764, 1790, 1931
TasI AATT 9 cut(s) 181, 412, 550, 1271, 1279, 1315, 1426, 1439, 1923
TauI GCSGC 2 cut(s) 346, 642
TfiI GAWTC 6 cut(s) 115, 133, 851, 1777, 1933, 2101
Tru1I TTAA 2 cut(s) 692, 1319
Tru9I TTAA 2 cut(s) 692, 1319
TscAI CASTG 5 cut(s) 309, 378, 463, 1138, 1912
TseFI GTSAC 1 cut(s) 517
TseI GCWGC 8 cut(s) 77, 422, 575, 962, 991, 1515, 1580, 1679
Tsp45I GTSAC 1 cut(s) 517
TspDTI ATGAA 9 cut(s) 179, 366, 615, 1293, 1536, 1560, 1653, 1805, 2037
TspGWI ACGGA 3 cut(s) 884, 1997, 2003
TspRI CASTG 5 cut(s) 309, 378, 463, 1138, 1912
Van91I CCANNNNNTGG 2 cut(s) 287, 809
VpaK11BI GGWCC 1 cut(s) 1368
XagI CCTNNNNNAGG 2 cut(s) 813, 940
XapI RAATTY 3 cut(s) 181, 1279, 1315
XbaI TCTAGA 1 cut(s) 239
XcmI CCANNNNNNNNNTGG 2 cut(s) 288, 1237
XmnI GAANNNNTTC 1 cut(s) 1464
XspI CTAG 9 cut(s) 44, 234, 240, 942, 966, 975, 1052, 1287, 1841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.