Rroxscaffold_2G00091930

Serine threonine-protein kinase WNK8-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
13495970 .. 13498589
2620 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_2G00091930.1

Sequence Viewer

Length: 1497 bp
ATGAGGAGTGCCATCTTTTGGTCCCTCTATGTTGGTAAAATGACTGTGTACAAGGCTTTTGATGAGGAAGAAGGGATTGAAGTGGCGTGGAGCAAAGTCAAGACTGAGGACGAGGCTGAGCTTCAGAGATTGTTTTCGGAGGTTAATCTGCTCAAGTCTTTGAAGCATGAGAACATCATCAAGCTTTTTAGCTGGTGGGTTGTGGAGGATGATGACGATAATGGTGACGGTAAAACCAAGAAGAACAAGAAGAAGAAGAAGACTGTGAATATGATAACGGAGCTGTTCACTTCCGGGAGCTTGAAGCAGTATCGAAAGAAGCACACCCATGTTGAGATCAAGGCCATCAAGAAATGGGCGAGGCAGATTCTCAAGGGGTTGAGCTATCTGCACTGTCATGACCCTCCGATTGTTCATAGGGATTTGAAGTGTGACAATGTGTTTATTAATGGGTTTAATGGGGAAGTGAAGATTGGAGATCTGGGGTTTGCGTTGGTGATGCAGCAGCCTACTACTGAGTTTAGAGTGATTGGCACGCCGGAGTTTATAGCGCCGGAGATGTATGACGAGGAGTATAATGAGTTGGTGGATATCTATTCTTTTGGGTTGTGCTTGCTAGAAATGGTGACTTGTGAGTACCCTTACAAGGAGTGTCGAAATTCGGCTCATATTTACAAGAAGGTTGTCAATGGTGTAATGCCGGCTTCTCTGAATAAAGTGAAGGATCCTCAAGTGAAGCAGTTCATTGAGAAGTGTCTAGTTCCGGCATCAATGAGATTGTCTGCAATGGAGCTCTTGAAAGATCCATTCCTTGCAGCTGATGATTCAAGGGTGCCTAAATCTCTTCCCATGGAAATAGATAGCAGAAGTGTCAAAGAGAGTTCCACATCATCTCGCTCTTCGATTCTGGAGTGTCAGAGGTCCACAAAGAGTAATGAATTGACTTTAAGAGCAAAGAGGAATTCTGATAGTAGTAATACTATTGCTTTGACCTTGAGTGTTGCTGATCCACGGGGTCGCCGTGGGAAGAAGACTATTGAGTTTGATTTCTATCTTGATTCCGATACTGCTATTTCGATTGCTGGGGAGATGGTTGATCAGGAGCTTGGTCTTTCAACTGAAGATGTGTCTGCCGTGGCTGAGTTGATTGATAAATTGGTTATGAAGCTTGTGCCCAAGTGGAAACCTACTTCGTCTGTAGCATATAGCTCATGTACCACTACTAGGTCAGATGCTACAAAGTGTGGCTGTGGAGCTAATTCCGGCGATTCGTCAAAGAACTCTACTACCTCGAGCATGGAGATATGGAAAAGCTTTAGCACGTCAAGCATTTGTTCCTTGCAGTCTGAGTCATCTCCAATGGACAAACATCGGTATGATCACTTAAAAGCGGAGCTTGACTTGATTGATGCACAGTATCAACAACGTTTTGTTGAGCTGGTGAAGATGAAGGAAGAAGCGATCCGAAGTGCAAAGAAGTTGGTTGGTGTAGTCTAG

Protein Analysis

498

Amino Acids

56.25

Weight (kDa)

7.5

Isoelectric Point (pI)

47.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 15 - 271 7e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 17 - 254 5.6e-29 Protein tyrosine and serine/threonine kinase
OSR1_C PF12202 328 - 387 3.9e-08 Oxidative-stress-responsive kinase 1 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 832
AccB7I CCANNNNNTGG 1 cut(s) 18
AciI CCGC 1 cut(s) 1391
AclI AACGTT 1 cut(s) 1426
AclWI GGATC 5 cut(s) 719, 732, 797, 1001, 1456
AcsI RAATTY 2 cut(s) 658, 961
AcuI CTGAAG 2 cut(s) 107, 1140
AfaI GTAC 3 cut(s) 50, 638, 1216
AfiI CCNNNNNNNGG 3 cut(s) 18, 646, 1224
AgsI TTSAA 7 cut(s) 80, 163, 304, 427, 799, 828, 1116
AjiI CACGTC 1 cut(s) 1323
AjuI GAANNNNNNNTTGG 2 cut(s) 456, 488
Alw21I GWGCWC 1 cut(s) 795
AlwI GGATC 5 cut(s) 719, 732, 797, 1001, 1456
Ama87I CYCGRG 1 cut(s) 1291
AoxI GGCC 1 cut(s) 342
ApeKI GCWGC 3 cut(s) 502, 505, 815
ApoI RAATTY 2 cut(s) 658, 961
AseI ATTAAT 1 cut(s) 447
Asp700I GAANNNNTTC 1 cut(s) 740
AspLEI GCGC 1 cut(s) 553
AspS9I GGNCC 2 cut(s) 21, 921
AsuC2I CCSGG 1 cut(s) 295
AsuHPI GGTGA 4 cut(s) 236, 508, 637, 1453
AvaI CYCGRG 1 cut(s) 1291
AvaII GGWCC 2 cut(s) 21, 921
BaeGI GKGCMC 1 cut(s) 1176
BamHI GGATCC 1 cut(s) 724
BanI GGYRCC 1 cut(s) 832
BanII GRGCYC 1 cut(s) 795
BbsI GAAGAC 2 cut(s) 266, 1037
Bbv12I GWGCWC 1 cut(s) 795
BbvI GCAGC 3 cut(s) 514, 517, 827
BccI CCATC 3 cut(s) 20, 353, 1084
BceAI ACGGC 2 cut(s) 1005, 1118
BclI TGATCA 2 cut(s) 1096, 1378
BcnI CCSGG 1 cut(s) 295
BfaI CTAG 4 cut(s) 617, 758, 1224, 1495
BfmI CTRYAG 1 cut(s) 1197
BfoI RGCGCY 1 cut(s) 554
BglII AGATCT 1 cut(s) 478
BisI GCNGC 3 cut(s) 503, 506, 816
BlpI GCTNAGC 1 cut(s) 117
BlsI GCNGC 3 cut(s) 504, 507, 817
Bme1390I CCNGG 1 cut(s) 295
Bme18I GGWCC 2 cut(s) 21, 921
BmeT110I CYCGRG 1 cut(s) 1291
BmgBI CACGTC 1 cut(s) 1323
BmgT120I GGNCC 2 cut(s) 21, 921
BmiI GGNNCC 3 cut(s) 23, 726, 834
BmrFI CCNGG 1 cut(s) 295
BmsI GCATC 4 cut(s) 489, 776, 1222, 1399
BpiI GAAGAC 2 cut(s) 266, 1037
BpmI CTGGAG 1 cut(s) 929
Bpu1102I GCTNAGC 1 cut(s) 117
BpuEI CTTGAG 4 cut(s) 137, 356, 714, 1015
BpuMI CCSGG 1 cut(s) 295
BsaBI GATNNNNATC 1 cut(s) 1050
BsaJI CCNNGG 4 cut(s) 849, 1010, 1021, 1134
Bsc4I CCNNNNNNNGG 3 cut(s) 18, 646, 1224
Bse118I RCCGGY 1 cut(s) 700
Bse3DI GCAATG 1 cut(s) 792
Bse8I GATNNNNATC 1 cut(s) 1050
BseDI CCNNGG 4 cut(s) 849, 1010, 1021, 1134
BseGI GGATG 1 cut(s) 214
BseJI GATNNNNATC 1 cut(s) 1050
BseLI CCNNNNNNNGG 3 cut(s) 18, 646, 1224
BseMI GCAATG 1 cut(s) 792
BseMII CTCAG 5 cut(s) 96, 108, 507, 1131, 1338
BseRI GAGGAG 2 cut(s) 19, 584
BseSI GKGCMC 1 cut(s) 1176
BseXI GCAGC 3 cut(s) 514, 517, 827
BseYI CCCAGC 1 cut(s) 1082
BsgI GTGCAG 1 cut(s) 374
BshFI GGCC 1 cut(s) 344
BshNI GGYRCC 1 cut(s) 832
BsiHKAI GWGCWC 1 cut(s) 795
BsiHKCI CYCGRG 1 cut(s) 1291
BsiSI CCGG 6 cut(s) 294, 539, 554, 701, 764, 1263
BslFI GGGAC 1 cut(s) 7
BslI CCNNNNNNNGG 3 cut(s) 18, 646, 1224
BsmFI GGGAC 1 cut(s) 7
BsnI GGCC 1 cut(s) 344
BsoBI CYCGRG 1 cut(s) 1291
Bsp1286I GDGCHC 2 cut(s) 795, 1176
Bsp1407I TGTACA 1 cut(s) 48
Bsp143I GATC 8 cut(s) 336, 478, 724, 802, 1006, 1096, 1378, 1461
Bsp1720I GCTNAGC 1 cut(s) 117
Bsp19I CCATGG 1 cut(s) 849
BspACI CCGC 1 cut(s) 1391
BspANI GGCC 1 cut(s) 344
BspCNI CTCAG 5 cut(s) 97, 109, 508, 1132, 1339
BspHI TCATGA 1 cut(s) 397
BspLI GGNNCC 3 cut(s) 23, 726, 834
BspPI GGATC 5 cut(s) 719, 732, 797, 1001, 1456
BspQI GCTCTTC 1 cut(s) 904
BspT107I GGYRCC 1 cut(s) 832
BsrDI GCAATG 1 cut(s) 792
BsrFI RCCGGY 1 cut(s) 700
BsrGI TGTACA 1 cut(s) 48
BssAI RCCGGY 1 cut(s) 700
BssECI CCNNGG 4 cut(s) 849, 1010, 1021, 1134
BssMI GATC 8 cut(s) 336, 478, 724, 802, 1006, 1096, 1378, 1461
BssT1I CCWWGG 1 cut(s) 849
Bst4CI ACNGT 5 cut(s) 46, 230, 265, 395, 1416
Bst6I CTCTTC 2 cut(s) 849, 904
BstAUI TGTACA 1 cut(s) 48
BstC8I GCNNGC 3 cut(s) 536, 614, 702
BstDEI CTNAG 5 cut(s) 105, 117, 516, 1140, 1347
BstDSI CCRYGG 4 cut(s) 849, 1010, 1021, 1134
BstF5I GGATG 1 cut(s) 214
BstH2I RGCGCY 1 cut(s) 554
BstHHI GCGC 1 cut(s) 553
BstKTI GATC 8 cut(s) 339, 481, 727, 805, 1009, 1099, 1381, 1464
BstMBI GATC 8 cut(s) 336, 478, 724, 802, 1006, 1096, 1378, 1461
BstMWI GCNNNNNNNGC 1 cut(s) 1326
BstSCI CCNGG 1 cut(s) 293
BstSFI CTRYAG 1 cut(s) 1197
BstSLI GKGCMC 1 cut(s) 1176
BstV1I GCAGC 3 cut(s) 514, 517, 827
BstV2I GAAGAC 2 cut(s) 266, 1037
BstX2I RGATCY 3 cut(s) 478, 724, 802
BstYI RGATCY 3 cut(s) 478, 724, 802
BsuRI GGCC 1 cut(s) 344
BtgI CCRYGG 4 cut(s) 849, 1010, 1021, 1134
BtrI CACGTC 1 cut(s) 1323
BtsCI GGATG 1 cut(s) 214
BtsIMutI CAGTG 1 cut(s) 391
Cac8I GCNNGC 3 cut(s) 536, 614, 702
CciI TCATGA 1 cut(s) 397
CfoI GCGC 1 cut(s) 553
Cfr10I RCCGGY 1 cut(s) 700
Cfr13I GGNCC 2 cut(s) 21, 921
Csp6I GTAC 3 cut(s) 49, 637, 1215
CviAII CATG 6 cut(s) 167, 329, 398, 850, 1212, 1297
CviQI GTAC 3 cut(s) 49, 637, 1215
DdeI CTNAG 5 cut(s) 105, 117, 516, 1140, 1347
DpnI GATC 8 cut(s) 338, 480, 726, 804, 1008, 1098, 1380, 1463
DpnII GATC 8 cut(s) 336, 478, 724, 802, 1006, 1096, 1378, 1461
Eam1104I CTCTTC 2 cut(s) 849, 904
EarI CTCTTC 2 cut(s) 849, 904
Ecl136II GAGCTC 1 cut(s) 793
Eco130I CCWWGG 1 cut(s) 849
Eco24I GRGCYC 1 cut(s) 795
Eco32I GATATC 1 cut(s) 592
Eco47I GGWCC 2 cut(s) 21, 921
Eco53kI GAGCTC 1 cut(s) 793
Eco57I CTGAAG 2 cut(s) 107, 1140
Eco88I CYCGRG 1 cut(s) 1291
EcoICRI GAGCTC 1 cut(s) 793
EcoRI GAATTC 1 cut(s) 961
EcoRV GATATC 1 cut(s) 592
EcoT14I CCWWGG 1 cut(s) 849
EcoT38I GRGCYC 1 cut(s) 795
ErhI CCWWGG 1 cut(s) 849
FaeI CATG 6 cut(s) 170, 332, 401, 853, 1215, 1300
FalI AAGNNNNNCTT 2 cut(s) 1380, 1412
FaqI GGGAC 1 cut(s) 7
FatI CATG 6 cut(s) 166, 328, 397, 849, 1211, 1296
FbaI TGATCA 2 cut(s) 1096, 1378
Fnu4HI GCNGC 3 cut(s) 503, 506, 816
FokI GGATG 1 cut(s) 221
FriOI GRGCYC 1 cut(s) 795
Fsp4HI GCNGC 3 cut(s) 503, 506, 816
FspBI CTAG 4 cut(s) 617, 758, 1224, 1495
GlaI GCGC 1 cut(s) 552
GluI GCNGC 3 cut(s) 503, 506, 816
GsaI CCCAGC 1 cut(s) 1086
GsuI CTGGAG 1 cut(s) 929
HaeII RGCGCY 1 cut(s) 554
HaeIII GGCC 1 cut(s) 344
HapII CCGG 6 cut(s) 294, 539, 554, 701, 764, 1263
HhaI GCGC 1 cut(s) 553
Hin1II CATG 6 cut(s) 170, 332, 401, 853, 1215, 1300
Hin6I GCGC 1 cut(s) 551
HinP1I GCGC 1 cut(s) 551
HindIII AAGCTT 3 cut(s) 182, 1166, 1312
HinfI GANTC 6 cut(s) 367, 824, 904, 1058, 1268, 1349
HpaII CCGG 6 cut(s) 294, 539, 554, 701, 764, 1263
HphI GGTGA 4 cut(s) 236, 508, 637, 1453
Hpy166II GTNNAC 3 cut(s) 49, 288, 924
Hpy188III TCNNGA 7 cut(s) 100, 349, 398, 796, 908, 1055, 1100
Hpy8I GTNNAC 3 cut(s) 49, 288, 924
HpyAV CCTTC 4 cut(s) 65, 673, 715, 1444
HpyCH4III ACNGT 5 cut(s) 46, 230, 265, 395, 1416
HpyCH4IV ACGT 2 cut(s) 1322, 1426
HpyCH4V TGCA 7 cut(s) 391, 502, 785, 815, 1342, 1412, 1472
HpyF10VI GCNNNNNNNGC 1 cut(s) 1326
HpyF3I CTNAG 5 cut(s) 105, 117, 516, 1140, 1347
HpySE526I ACGT 2 cut(s) 1322, 1426
Hsp92II CATG 6 cut(s) 170, 332, 401, 853, 1215, 1300
HspAI GCGC 1 cut(s) 551
KroI GCCGGC 1 cut(s) 700
KroNI GCCGGC 1 cut(s) 702
Ksp22I TGATCA 2 cut(s) 1096, 1378
Kzo9I GATC 8 cut(s) 336, 478, 724, 802, 1006, 1096, 1378, 1461
LguI GCTCTTC 1 cut(s) 904
LmnI GCTCC 7 cut(s) 90, 280, 297, 790, 1102, 1253, 1393
Lsp1109I GCAGC 3 cut(s) 514, 517, 827
LweI GCATC 4 cut(s) 489, 776, 1222, 1399
MaeI CTAG 4 cut(s) 617, 758, 1224, 1495
MaeII ACGT 2 cut(s) 1322, 1426
MaeIII GTNAC 3 cut(s) 224, 431, 625
MalI GATC 8 cut(s) 338, 480, 726, 804, 1008, 1098, 1380, 1463
MboI GATC 8 cut(s) 336, 478, 724, 802, 1006, 1096, 1378, 1461
MflI RGATCY 3 cut(s) 478, 724, 802
MhlI GDGCHC 2 cut(s) 795, 1176
MluCI AATT 5 cut(s) 658, 938, 961, 1154, 1258
MlyI GAGTC 1 cut(s) 1358
MroNI GCCGGC 1 cut(s) 700
MroXI GAANNNNTTC 1 cut(s) 740
MseI TTAA 5 cut(s) 144, 447, 456, 947, 1385
MslI CAYNNNNRTG 3 cut(s) 327, 396, 1374
MspA1I CMGCKG 1 cut(s) 818
MspI CCGG 6 cut(s) 294, 539, 554, 701, 764, 1263
MspR9I CCNGG 1 cut(s) 295
MwoI GCNNNNNNNGC 1 cut(s) 1326
NaeI GCCGGC 1 cut(s) 702
NciI CCSGG 1 cut(s) 295
NcoI CCATGG 1 cut(s) 849
NdeII GATC 8 cut(s) 336, 478, 724, 802, 1006, 1096, 1378, 1461
NgoMIV GCCGGC 1 cut(s) 700
NlaIII CATG 6 cut(s) 170, 332, 401, 853, 1215, 1300
NlaIV GGNNCC 3 cut(s) 23, 726, 834
NmuCI GTSAC 3 cut(s) 224, 431, 625
PaeR7I CTCGAG 1 cut(s) 1291
PagI TCATGA 1 cut(s) 397
PciSI GCTCTTC 1 cut(s) 904
PcsI WCGNNNNNNNCGW 1 cut(s) 1018
PdiI GCCGGC 1 cut(s) 702
PdmI GAANNNNTTC 1 cut(s) 740
PfeI GAWTC 5 cut(s) 367, 824, 904, 1058, 1268
PflMI CCANNNNNTGG 1 cut(s) 18
PfoI TCCNGGA 1 cut(s) 293
PkrI GCNGC 3 cut(s) 504, 507, 817
PleI GAGTC 1 cut(s) 1357
PpsI GAGTC 1 cut(s) 1357
PshBI ATTAAT 1 cut(s) 447
Psp124BI GAGCTC 1 cut(s) 795
Psp1406I AACGTT 1 cut(s) 1426
PspFI CCCAGC 1 cut(s) 1082
PspN4I GGNNCC 3 cut(s) 23, 726, 834
PspPI GGNCC 2 cut(s) 21, 921
PspXI VCTCGAGB 1 cut(s) 1291
PsuI RGATCY 3 cut(s) 478, 724, 802
PvuII CAGCTG 1 cut(s) 818
RsaI GTAC 3 cut(s) 50, 638, 1216
RsaNI GTAC 3 cut(s) 49, 637, 1215
RseI CAYNNNNRTG 3 cut(s) 327, 396, 1374
SacI GAGCTC 1 cut(s) 795
SapI GCTCTTC 1 cut(s) 904
SaqAI TTAA 5 cut(s) 144, 447, 456, 947, 1385
SatI GCNGC 3 cut(s) 503, 506, 816
Sau3AI GATC 8 cut(s) 336, 478, 724, 802, 1006, 1096, 1378, 1461
Sau96I GGNCC 2 cut(s) 21, 921
SchI GAGTC 1 cut(s) 1358
ScrFI CCNGG 1 cut(s) 295
SduI GDGCHC 2 cut(s) 795, 1176
SfaNI GCATC 4 cut(s) 489, 776, 1222, 1399
SfcI CTRYAG 1 cut(s) 1197
Sfr274I CTCGAG 1 cut(s) 1291
SinI GGWCC 2 cut(s) 21, 921
SlaI CTCGAG 1 cut(s) 1291
SmiMI CAYNNNNRTG 3 cut(s) 327, 396, 1374
SmlI CTYRAG 5 cut(s) 152, 371, 729, 994, 1291
SmoI CTYRAG 5 cut(s) 152, 371, 729, 994, 1291
Sse9I AATT 5 cut(s) 658, 938, 961, 1154, 1258
SsiI CCGC 1 cut(s) 1391
SspMI CTAG 4 cut(s) 617, 758, 1224, 1495
SstI GAGCTC 1 cut(s) 795
StyD4I CCNGG 1 cut(s) 293
StyI CCWWGG 1 cut(s) 849
TaaI ACNGT 5 cut(s) 46, 230, 265, 395, 1416
TaiI ACGT 2 cut(s) 1325, 1429
TaqI TCGA 5 cut(s) 313, 655, 902, 1076, 1292
TasI AATT 5 cut(s) 658, 938, 961, 1154, 1258
TatI WGTACW 1 cut(s) 48
TfiI GAWTC 5 cut(s) 367, 824, 904, 1058, 1268
Tru1I TTAA 5 cut(s) 144, 447, 456, 947, 1385
Tru9I TTAA 5 cut(s) 144, 447, 456, 947, 1385
TscAI CASTG 1 cut(s) 398
TseFI GTSAC 3 cut(s) 224, 431, 625
TseI GCWGC 3 cut(s) 502, 505, 815
Tsp45I GTSAC 3 cut(s) 224, 431, 625
TspDTI ATGAA 5 cut(s) 404, 733, 951, 1178, 1463
TspGWI ACGGA 1 cut(s) 293
TspRI CASTG 1 cut(s) 398
Van91I CCANNNNNTGG 1 cut(s) 18
VpaK11BI GGWCC 2 cut(s) 21, 921
VspI ATTAAT 1 cut(s) 447
XapI RAATTY 2 cut(s) 658, 961
XhoI CTCGAG 1 cut(s) 1291
XmnI GAANNNNTTC 1 cut(s) 740
XspI CTAG 4 cut(s) 617, 758, 1224, 1495
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.