Rroxscaffold_3G00268010

Serine threonine-protein kinase WNK8-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
61187663 .. 61190635
2973 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00268010.1

Sequence Viewer

Length: 1767 bp
ATGAAATCTTGGGGAGGAGCATTCAAGACTGTATATAAGGCTTTTGACGAAGTTGAAGGTTTAGAGGTGGCATGGAGCCAGGTGCATGTTGAGGATGTGTTGCAGACGCCGGAGCAACTTCAGAGATTGTATTCGGAGGTTCATCTGCTGAAGTCGTTGAAGCATGAAAATATTATCAAGTTCTGTAACTGGTGGGTCGATGATAAGAACAAGACCATCAACATTATCACAGAATTGTTCACTTCTGGGAGCTTGAGGCAGTATCGAAGGAAGCATAAATGCGTTGAATTGAAGGCCATCAAGAAATGGGCAAGGCAGATTCTTCGAGGCTTGCACTATCTGCATTCTCACAATCCTCCAATTATTCACAGAGATTTGAAATGCGACAACATATTTGTCAATGGAAATCAAGGGGAAATAAAAATTGGAGATCTGGGATTGGCAATAGTCATGCGGCAGCCTACTGCCCATAGTGTGATTGGCACTCCAGAATTCATGGCTCCCGAGCTTTACGATGAGGAATATAATGAATTAGTCGACATCTATTCTTTTGGCATGTGCATGCTAGAAATGGTGACTTGTGAATACCCTTACAATGAATGTAAAAATCCTGCTCAGATTTATAAGAAGGTTACTAATGGTATAAAGCCTGCTTCACTCAGTAAAGTGAGTGATCCTGAAGTCAAGCAGTTCATAGAGAAGTGTCTGGTTCCAGCGTCAATGAGACTGCCTGCAGTGGAGCTCTTGAAAGATCCATTCCTTGCAATTGACAATTTGAAGGAGATTACTTGTGCTCCATTGGGATCACACAATTTGATGCCCGTGTTACTGAACACGCCACAGCCTGAAGCTCGTCCGATGCATGTAGATGCTAACTGCCAGAAGATTTCTGCTGGCTCTTGCAGAAAAAGTGTCGATGCAACTTCCATCTCATCCAACCCCTCAGTTCTGGAGTTACAGAGATTCACAGAGAATAATGCTTTCACTTTAAGAGCAGAGAAAAATGCTGATAATACCATCGCATTGACTTTGCGTATTGTTGATCCATGCGGTCATGGTAAAACTATCCATTTTGAGTTCTACCTCGATTCGGATACTGCAATTTCAATTGCAGGGGAGATGGCTGAGCAACTTGGTCTTTCAAATGATGATGTCTGCGTAACAGCTGAGTTAATTGATAGCTTGATTATGAAGCTTGTACCCAGCTGGAAACCTACATCTGAGAGTTCATCATGTGGAGCAAATAGTTCATGTGGGGATCAGCGTGTACGTCAAAACGGGTGCCCTTGGGGTTCTGCGTTGCCCAAGGCTGCATCAATGATTTCAGATATCTCAGCCGAGTATGGCACCACTACTGCCTCAGATGCCACTAAGGTCAAAGTTCTAGAATCAGACAAGTACAGTTTTGATGACTGCTATGAAGGTTCAGATGGGTACGGTTCCAGCCCAGATTGTATGATTCTTGATCAGCTTAAGCAGAAGAATTATGAGGATAATTTTGGGGATTCTCTCGTGATGAATGACTCAGCAATGAACTCTACTATCTGGAGCCTTGATAGATCAAAAACTTATAGCTTATCAAGCATTTGTTCATTGTTTGAGTTGTCTCTAATGGAGAAACATCCAGACGATGGGTTAAAAGTGGAGCTGGATTCAATTGATCTGCGGTTTCATCACCGTTTTCTTGTGCTCTTGAAGATGAAGGAAGAGGCAATACAAAGTGCAAAGGAGAAGTGGATAGCAAAGAAGAAAATGGGTGTTAACTAA

Protein Analysis

588

Amino Acids

65.95

Weight (kDa)

5.66

Isoelectric Point (pI)

37.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 6 - 254 7.9e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 6 - 238 2.5e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 624
AccB1I GGYRCC 2 cut(s) 1281, 1346
AccB7I CCANNNNNTGG 1 cut(s) 1631
AccI GTMKAC 1 cut(s) 537
AciI CCGC 3 cut(s) 454, 1050, 1666
AclWI GGATC 5 cut(s) 668, 746, 811, 1037, 1266
AcsI RAATTY 1 cut(s) 491
AcuI CTGAAG 4 cut(s) 104, 170, 699, 867
AcyI GRCGYC 1 cut(s) 107
AfaI GTAC 4 cut(s) 1200, 1269, 1400, 1436
AfiI CCNNNNNNNGG 2 cut(s) 1090, 1631
AflII CTTAAG 1 cut(s) 1472
AjnI CCWGG 1 cut(s) 78
AjuI GAANNNNNNNTTGG 2 cut(s) 408, 440
Alw21I GWGCWC 3 cut(s) 744, 796, 1692
Alw26I GTCTC 2 cut(s) 718, 1611
AlwI GGATC 5 cut(s) 668, 746, 811, 1037, 1266
Ama87I CYCGRG 1 cut(s) 503
AoxI GGCC 1 cut(s) 294
ApeKI GCWGC 2 cut(s) 457, 1310
ApoI RAATTY 1 cut(s) 491
ArsI GACNNNNNNTTYG 2 cut(s) 377, 409
AsuHPI GGTGA 2 cut(s) 586, 1667
AvaI CYCGRG 1 cut(s) 503
BaeGI GKGCMC 1 cut(s) 1286
BanI GGYRCC 2 cut(s) 1281, 1346
BanII GRGCYC 1 cut(s) 744
BarI GAAGNNNNNNTAC 2 cut(s) 1698, 1730
BauI CACGAG 1 cut(s) 1511
Bbv12I GWGCWC 3 cut(s) 744, 796, 1692
BbvI GCAGC 2 cut(s) 469, 1297
BccI CCATC 7 cut(s) 224, 305, 935, 1025, 1114, 1424, 1625
BcgI CGANNNNNNTGC 2 cut(s) 305, 339
BciT130I CCWGG 1 cut(s) 80
BciVI GTATCC 1 cut(s) 1087
BclI TGATCA 1 cut(s) 1465
BcoDI GTCTC 2 cut(s) 718, 1611
BfaI CTAG 2 cut(s) 566, 1385
BfmI CTRYAG 1 cut(s) 732
BfrI CTTAAG 1 cut(s) 1472
BfuI GTATCC 1 cut(s) 1087
BglII AGATCT 1 cut(s) 430
BisI GCNGC 3 cut(s) 455, 458, 1311
BlpI GCTNAGC 1 cut(s) 1125
BlsI GCNGC 3 cut(s) 456, 459, 1312
Bme1390I CCNGG 1 cut(s) 80
BmeT110I CYCGRG 1 cut(s) 503
BmiI GGNNCC 7 cut(s) 77, 501, 711, 1283, 1348, 1441, 1550
BmrFI CCNGG 1 cut(s) 80
BmsI GCATC 6 cut(s) 807, 849, 859, 907, 1322, 1354
BpmI CTGGAG 3 cut(s) 471, 971, 1567
Bpu1102I GCTNAGC 1 cut(s) 1125
BpuEI CTTGAG 1 cut(s) 274
BsaHI GRCGYC 1 cut(s) 107
BsaJI CCNNGG 2 cut(s) 1286, 1305
BsaXI ACNNNNNCTCC 2 cut(s) 778, 808
Bsc4I CCNNNNNNNGG 2 cut(s) 1090, 1631
Bse1I ACTGG 1 cut(s) 194
Bse3DI GCAATG 1 cut(s) 1536
BseBI CCWGG 1 cut(s) 80
BseDI CCNNGG 2 cut(s) 1286, 1305
BseGI GGATG 3 cut(s) 100, 932, 1621
BseLI CCNNNNNNNGG 2 cut(s) 1090, 1631
BseMI GCAATG 1 cut(s) 1536
BseMII CTCAG 9 cut(s) 629, 673, 957, 1116, 1158, 1212, 1347, 1374, 1539
BseNI ACTGG 1 cut(s) 194
BseRI GAGGAG 1 cut(s) 30
BseSI GKGCMC 1 cut(s) 1286
BseXI GCAGC 2 cut(s) 469, 1297
BseYI CCCAGC 1 cut(s) 1202
BshFI GGCC 1 cut(s) 296
BshNI GGYRCC 2 cut(s) 1281, 1346
BsiHKAI GWGCWC 3 cut(s) 744, 796, 1692
BsiHKCI CYCGRG 1 cut(s) 503
BsiSI CCGG 1 cut(s) 110
BslI CCNNNNNNNGG 2 cut(s) 1090, 1631
BsmAI GTCTC 2 cut(s) 718, 1611
BsmI GAATGC 2 cut(s) 20, 343
BsnI GGCC 1 cut(s) 296
BsoBI CYCGRG 1 cut(s) 503
Bsp1286I GDGCHC 4 cut(s) 744, 796, 1286, 1692
Bsp143I GATC 9 cut(s) 430, 673, 751, 803, 1042, 1258, 1465, 1559, 1660
Bsp1720I GCTNAGC 1 cut(s) 1125
BspACI CCGC 3 cut(s) 454, 1050, 1666
BspANI GGCC 1 cut(s) 296
BspCNI CTCAG 9 cut(s) 628, 672, 956, 1117, 1159, 1213, 1346, 1373, 1538
BspLI GGNNCC 7 cut(s) 77, 501, 711, 1283, 1348, 1441, 1550
BspMAI CTGCAG 1 cut(s) 736
BspPI GGATC 5 cut(s) 668, 746, 811, 1037, 1266
BspT107I GGYRCC 2 cut(s) 1281, 1346
BspTI CTTAAG 1 cut(s) 1472
BsrDI GCAATG 1 cut(s) 1536
BsrI ACTGG 1 cut(s) 194
BssECI CCNNGG 2 cut(s) 1286, 1305
BssMI GATC 9 cut(s) 430, 673, 751, 803, 1042, 1258, 1465, 1559, 1660
BssNI GRCGYC 1 cut(s) 107
BssSI CACGAG 1 cut(s) 1511
BssT1I CCWWGG 2 cut(s) 1286, 1305
Bst2BI CACGAG 1 cut(s) 1511
Bst2UI CCWGG 1 cut(s) 80
Bst4CI ACNGT 4 cut(s) 31, 1403, 1439, 1679
Bst6I CTCTTC 1 cut(s) 1701
BstACI GRCGYC 1 cut(s) 107
BstAFI CTTAAG 1 cut(s) 1472
BstAPI GCANNNNNTGC 1 cut(s) 340
BstC8I GCNNGC 5 cut(s) 332, 563, 651, 732, 895
BstF5I GGATG 3 cut(s) 100, 932, 1621
BstKTI GATC 9 cut(s) 433, 676, 754, 806, 1045, 1261, 1468, 1562, 1663
BstMAI GTCTC 2 cut(s) 718, 1611
BstMBI GATC 9 cut(s) 430, 673, 751, 803, 1042, 1258, 1465, 1559, 1660
BstMWI GCNNNNNNNGC 3 cut(s) 340, 1364, 1581
BstNI CCWGG 1 cut(s) 80
BstNSI RCATGY 4 cut(s) 89, 559, 565, 866
BstSCI CCNGG 1 cut(s) 78
BstSFI CTRYAG 1 cut(s) 732
BstSLI GKGCMC 1 cut(s) 1286
BstV1I GCAGC 2 cut(s) 469, 1297
BstX2I RGATCY 2 cut(s) 430, 751
BstYI RGATCY 2 cut(s) 430, 751
BsuI GTATCC 1 cut(s) 1087
BsuRI GGCC 1 cut(s) 296
BtgZI GCGATG 1 cut(s) 1003
BtsCI GGATG 3 cut(s) 100, 932, 1621
BtsI GCAGTG 1 cut(s) 741
BtsIMutI CAGTG 1 cut(s) 741
Cac8I GCNNGC 5 cut(s) 332, 563, 651, 732, 895
CseI GACGC 2 cut(s) 115, 705
Csp6I GTAC 4 cut(s) 1199, 1268, 1399, 1435
CviQI GTAC 4 cut(s) 1199, 1268, 1399, 1435
DpnI GATC 9 cut(s) 432, 675, 753, 805, 1044, 1260, 1467, 1561, 1662
DpnII GATC 9 cut(s) 430, 673, 751, 803, 1042, 1258, 1465, 1559, 1660
Eam1104I CTCTTC 1 cut(s) 1701
EarI CTCTTC 1 cut(s) 1701
Ecl136II GAGCTC 1 cut(s) 742
Eco130I CCWWGG 2 cut(s) 1286, 1305
Eco24I GRGCYC 1 cut(s) 744
Eco32I GATATC 1 cut(s) 1330
Eco53kI GAGCTC 1 cut(s) 742
Eco57I CTGAAG 4 cut(s) 104, 170, 699, 867
Eco88I CYCGRG 1 cut(s) 503
EcoICRI GAGCTC 1 cut(s) 742
EcoRI GAATTC 1 cut(s) 491
EcoRII CCWGG 1 cut(s) 78
EcoRV GATATC 1 cut(s) 1330
EcoT14I CCWWGG 2 cut(s) 1286, 1305
EcoT22I ATGCAT 1 cut(s) 864
EcoT38I GRGCYC 1 cut(s) 744
ErhI CCWWGG 2 cut(s) 1286, 1305
FbaI TGATCA 1 cut(s) 1465
FblI GTMKAC 1 cut(s) 537
Fnu4HI GCNGC 3 cut(s) 455, 458, 1311
FokI GGATG 3 cut(s) 107, 919, 1608
FriOI GRGCYC 1 cut(s) 744
Fsp4HI GCNGC 3 cut(s) 455, 458, 1311
FspBI CTAG 2 cut(s) 566, 1385
GluI GCNGC 3 cut(s) 455, 458, 1311
GsaI CCCAGC 1 cut(s) 1206
GsuI CTGGAG 3 cut(s) 471, 971, 1567
HaeIII GGCC 1 cut(s) 296
HapII CCGG 1 cut(s) 110
HgaI GACGC 2 cut(s) 115, 705
Hin1I GRCGYC 1 cut(s) 107
HincII GTYRAC 2 cut(s) 538, 1762
HindII GTYRAC 2 cut(s) 538, 1762
HindIII AAGCTT 1 cut(s) 1193
HinfI GANTC 8 cut(s) 319, 963, 1088, 1388, 1459, 1505, 1523, 1652
HpaI GTTAAC 1 cut(s) 1762
HpaII CCGG 1 cut(s) 110
HphI GGTGA 2 cut(s) 586, 1667
Hpy166II GTNNAC 4 cut(s) 240, 538, 1268, 1762
Hpy8I GTNNAC 4 cut(s) 240, 538, 1268, 1762
HpyAV CCTTC 7 cut(s) 50, 261, 286, 622, 772, 1415, 1696
HpyCH4III ACNGT 4 cut(s) 31, 1403, 1439, 1679
HpyCH4IV ACGT 1 cut(s) 1270
HpyF10VI GCNNNNNNNGC 3 cut(s) 340, 1364, 1581
HpySE526I ACGT 1 cut(s) 1270
Hsp92I GRCGYC 1 cut(s) 107
Ksp22I TGATCA 1 cut(s) 1465
KspAI GTTAAC 1 cut(s) 1762
Kzo9I GATC 9 cut(s) 430, 673, 751, 803, 1042, 1258, 1465, 1559, 1660
Lsp1109I GCAGC 2 cut(s) 469, 1297
LweI GCATC 6 cut(s) 807, 849, 859, 907, 1322, 1354
MaeI CTAG 2 cut(s) 566, 1385
MaeII ACGT 1 cut(s) 1270
MaeIII GTNAC 6 cut(s) 185, 574, 631, 825, 954, 1159
MalI GATC 9 cut(s) 432, 675, 753, 805, 1044, 1260, 1467, 1561, 1662
MboI GATC 9 cut(s) 430, 673, 751, 803, 1042, 1258, 1465, 1559, 1660
MboII GAAGA 6 cut(s) 314, 895, 1492, 1708, 1718, 1759
MfeI CAATTG 3 cut(s) 765, 1107, 1656
MflI RGATCY 2 cut(s) 430, 751
MhlI GDGCHC 4 cut(s) 744, 796, 1286, 1692
MlyI GAGTC 1 cut(s) 1517
MmeI TCCRAC 1 cut(s) 960
Mph1103I ATGCAT 1 cut(s) 864
MseI TTAA 5 cut(s) 989, 1172, 1473, 1637, 1761
MslI CAYNNNNRTG 2 cut(s) 560, 867
MspA1I CMGCKG 2 cut(s) 1166, 1206
MspCI CTTAAG 1 cut(s) 1472
MspI CCGG 1 cut(s) 110
MspR9I CCNGG 1 cut(s) 80
MunI CAATTG 3 cut(s) 765, 1107, 1656
Mva1269I GAATGC 2 cut(s) 20, 343
MvaI CCWGG 1 cut(s) 80
MwoI GCNNNNNNNGC 3 cut(s) 340, 1364, 1581
NdeII GATC 9 cut(s) 430, 673, 751, 803, 1042, 1258, 1465, 1559, 1660
NlaIV GGNNCC 7 cut(s) 77, 501, 711, 1283, 1348, 1441, 1550
NmeAIII GCCGAG 1 cut(s) 1363
NmuCI GTSAC 1 cut(s) 574
NsiI ATGCAT 1 cut(s) 864
NspI RCATGY 4 cut(s) 89, 559, 565, 866
PaeI GCATGC 1 cut(s) 565
PctI GAATGC 2 cut(s) 20, 343
PfeI GAWTC 7 cut(s) 319, 963, 1088, 1388, 1459, 1505, 1652
PflMI CCANNNNNTGG 1 cut(s) 1631
PkrI GCNGC 3 cut(s) 456, 459, 1312
PleI GAGTC 1 cut(s) 1517
PpsI GAGTC 1 cut(s) 1517
PsiI TTATAA 1 cut(s) 624
Psp124BI GAGCTC 1 cut(s) 744
Psp6I CCWGG 1 cut(s) 78
PspFI CCCAGC 1 cut(s) 1202
PspGI CCWGG 1 cut(s) 78
PspN4I GGNNCC 7 cut(s) 77, 501, 711, 1283, 1348, 1441, 1550
PstI CTGCAG 1 cut(s) 736
PsuI RGATCY 2 cut(s) 430, 751
PvuII CAGCTG 2 cut(s) 1166, 1206
RsaI GTAC 4 cut(s) 1200, 1269, 1400, 1436
RsaNI GTAC 4 cut(s) 1199, 1268, 1399, 1435
RseI CAYNNNNRTG 2 cut(s) 560, 867
SacI GAGCTC 1 cut(s) 744
SalI GTCGAC 1 cut(s) 536
SaqAI TTAA 5 cut(s) 989, 1172, 1473, 1637, 1761
SatI GCNGC 3 cut(s) 455, 458, 1311
Sau3AI GATC 9 cut(s) 430, 673, 751, 803, 1042, 1258, 1465, 1559, 1660
SchI GAGTC 1 cut(s) 1517
ScrFI CCNGG 1 cut(s) 80
SduI GDGCHC 4 cut(s) 744, 796, 1286, 1692
SfaNI GCATC 6 cut(s) 807, 849, 859, 907, 1322, 1354
SfcI CTRYAG 1 cut(s) 732
SmiMI CAYNNNNRTG 2 cut(s) 560, 867
SmlI CTYRAG 2 cut(s) 253, 1472
SmoI CTYRAG 2 cut(s) 253, 1472
SphI GCATGC 1 cut(s) 565
SsiI CCGC 3 cut(s) 454, 1050, 1666
SspI AATATT 1 cut(s) 172
SspMI CTAG 2 cut(s) 566, 1385
SstI GAGCTC 1 cut(s) 744
StyD4I CCNGG 1 cut(s) 78
StyI CCWWGG 2 cut(s) 1286, 1305
TaaI ACNGT 4 cut(s) 31, 1403, 1439, 1679
TaiI ACGT 1 cut(s) 1273
TaqI TCGA 6 cut(s) 198, 265, 325, 537, 915, 1086
TatI WGTACW 1 cut(s) 1398
TauI GCSGC 1 cut(s) 457
TfiI GAWTC 7 cut(s) 319, 963, 1088, 1388, 1459, 1505, 1652
Tru1I TTAA 5 cut(s) 989, 1172, 1473, 1637, 1761
Tru9I TTAA 5 cut(s) 989, 1172, 1473, 1637, 1761
TscAI CASTG 1 cut(s) 741
TseFI GTSAC 1 cut(s) 574
TseI GCWGC 2 cut(s) 457, 1310
Tsp45I GTSAC 1 cut(s) 574
TspRI CASTG 1 cut(s) 741
Van91I CCANNNNNTGG 1 cut(s) 1631
Vha464I CTTAAG 1 cut(s) 1472
XapI RAATTY 1 cut(s) 491
XbaI TCTAGA 1 cut(s) 1384
XceI RCATGY 4 cut(s) 89, 559, 565, 866
XcmI CCANNNNNNNNNTGG 1 cut(s) 476
XmiI GTMKAC 1 cut(s) 537
XspI CTAG 2 cut(s) 566, 1385
Zsp2I ATGCAT 1 cut(s) 864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.