FvH4_6g42720

Serine threonine-protein kinase WNK8-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
33221978 .. 33223165
1188 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g42720.t1

Sequence Viewer

Length: 1188 bp
ATGATCACGGAGTTGTTTACTTCCGGGAGCTTGAAGCAGTATCGGAAGAAGCACACCAATGTCGAAGTCAAGGCCATCAAGAAATGGGCCAGGCAGATTCTCAAGGGCTTGACCTATCTGCATTCTCATGACCCTCCCATTGTTCATAGGGATTTGAAGTGTGACAATGTGTTTATCAATGGCTTCAATGGAGAGGTCAAGATTGGGGATTTCGGGTTTACGTTGGTGATGCATGGGCAGGTTAGTACTGAGCATGAAGTGATTGGCACGCCGGAGTTTATAGCGCCGGAGATGTATGAAGAGGATTATAATGAGCTGGTGGATATCTATTCTTTTGGGTTGTGCTTACTCGAAATGGTGACTTGTGAGTACCCTTATAAGGAGTGTCGAAGTCAGGCGCAGATTTACAAGAGGGTCATCTCTGGTGTAATGCCGGCTGCGCTGAGTAAAGTGAAGGATCTTCAAGTGAAGCAGTTCATTGAGAAGTGTCTAGTTCCTGCATCTAGGAGATTGTCTGCAGTGGAGCTCTTGAATGATCCGTTTCTTGCAGCTGATGATTCAAAGGAGCCTAGATCTTTTCCCATGGACATTGATACTGGAAGTGATAGAGTGAGCTCCAAATCATCTAGCTCTTCAATCCTAGAGTGTCAGAGGTTCACAAAGAATAATGTACTGACTTTAACCGCAAAGAGGAATGGCAGTAAAGCTATTGCTCTAACCTTGAGTGTTGCTGGTAGTCGTGGGAAGAAGAAGACTATCGAATTTGATTTCTATCCAGATTCAGATACTGCTGTTTCGATTGCTGGGGAGATGGTTGATCAGGAGCTTGGTCTTTCAACTGAAGATGTATTTGCCGTGGCTGAGTTGATTGATAGATTGGTTATGAAGATTTTGCCCAAGTGGAGACCCACTTCTTCAGTTGGAGCATATAGATCATGTACCACTACTAGCTCAGATTCAACAAAGAACTCTGCTGTCTCGAGCATGGAGATATGGAAGAGCTTTAGCATGTCAAGCATTTGTTCCTTGCAGTCTGAGTTATCTCTAGTGGACAAACATCACTATGATCAGCTAAAAGCGGAGCTTGACTCAATTGATGCACAGTATCAACAACGTTTTGTTGAGCTAGTGAAGATGAAGGAAGACGCCATCCAAAGTGCAGAGAAGAAGTTGGTTGGTCCAGTGTAG

Protein Analysis

396

Amino Acids

44.22

Weight (kDa)

6.12

Isoelectric Point (pI)

46.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 1 - 182 3.1e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1 - 165 2.8e-25 Protein tyrosine and serine/threonine kinase
OSR1_C PF12202 250 - 294 7.3e-06 Oxidative-stress-responsive kinase 1 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 309, 378
Acc36I ACCTGC 1 cut(s) 229
AciI CCGC 2 cut(s) 684, 1079
AclI AACGTT 1 cut(s) 1114
AclWI GGATC 2 cut(s) 465, 530
AcsI RAATTY 1 cut(s) 761
AcuI CTGAAG 2 cut(s) 861, 900
AcyI GRCGYC 1 cut(s) 1146
AfaI GTAC 4 cut(s) 247, 371, 672, 940
AfiI CCNNNNNNNGG 2 cut(s) 379, 690
AgsI TTSAA 9 cut(s) 34, 157, 187, 464, 532, 561, 636, 837, 960
AjnI CCWGG 1 cut(s) 89
Alw21I GWGCWC 2 cut(s) 528, 617
Alw26I GTCTC 2 cut(s) 898, 982
AlwI GGATC 2 cut(s) 465, 530
AlwNI CAGNNNCTG 1 cut(s) 788
Ama87I CYCGRG 1 cut(s) 979
AoxI GGCC 2 cut(s) 72, 87
ApeKI GCWGC 2 cut(s) 437, 548
ApoI RAATTY 1 cut(s) 761
Asp700I GAANNNNTTC 1 cut(s) 473
AspLEI GCGC 3 cut(s) 286, 400, 442
AspS9I GGNCC 2 cut(s) 87, 1178
AsuC2I CCSGG 1 cut(s) 25
AsuHPI GGTGA 2 cut(s) 238, 370
AvaI CYCGRG 1 cut(s) 979
AvaII GGWCC 1 cut(s) 1178
BaeI ACNNNNGTAYC 2 cut(s) 777, 810
BanII GRGCYC 2 cut(s) 528, 617
BbsI GAAGAC 2 cut(s) 758, 1149
Bbv12I GWGCWC 2 cut(s) 528, 617
BbvI GCAGC 2 cut(s) 424, 560
BccI CCATC 3 cut(s) 83, 805, 1157
BceAI ACGGC 1 cut(s) 839
BciT130I CCWGG 1 cut(s) 91
BclI TGATCA 3 cut(s) 3, 817, 1066
BcnI CCSGG 1 cut(s) 25
BcoDI GTCTC 2 cut(s) 898, 982
BfaI CTAG 8 cut(s) 491, 504, 570, 627, 641, 948, 1046, 1127
BfmI CTRYAG 1 cut(s) 516
BfoI RGCGCY 1 cut(s) 287
BfuAI ACCTGC 1 cut(s) 229
BglII AGATCT 1 cut(s) 572
BisI GCNGC 2 cut(s) 438, 549
BlsI GCNGC 2 cut(s) 439, 550
BmcAI AGTACT 1 cut(s) 247
Bme1390I CCNGG 2 cut(s) 25, 91
Bme18I GGWCC 1 cut(s) 1178
BmeT110I CYCGRG 1 cut(s) 979
BmgT120I GGNCC 2 cut(s) 87, 1178
BmiI GGNNCC 1 cut(s) 567
BmrFI CCNGG 2 cut(s) 25, 91
BmsI GCATC 3 cut(s) 219, 509, 1087
BpiI GAAGAC 2 cut(s) 758, 1149
BplI GAGNNNNNCTC 2 cut(s) 1073, 1105
BpuEI CTTGAG 2 cut(s) 86, 742
BpuMI CCSGG 1 cut(s) 25
BsaBI GATNNNNATC 1 cut(s) 771
BsaHI GRCGYC 1 cut(s) 1146
BsaI GGTCTC 1 cut(s) 898
BsaJI CCNNGG 2 cut(s) 582, 855
Bsc4I CCNNNNNNNGG 2 cut(s) 379, 690
Bse118I RCCGGY 1 cut(s) 433
Bse1I ACTGG 2 cut(s) 601, 1181
Bse8I GATNNNNATC 1 cut(s) 771
BseBI CCWGG 1 cut(s) 91
BseDI CCNNGG 2 cut(s) 582, 855
BseGI GGATG 1 cut(s) 1149
BseJI GATNNNNATC 1 cut(s) 771
BseLI CCNNNNNNNGG 2 cut(s) 379, 690
BseMII CTCAG 5 cut(s) 240, 434, 852, 966, 1026
BseNI ACTGG 2 cut(s) 601, 1181
BseXI GCAGC 2 cut(s) 424, 560
BseYI CCCAGC 1 cut(s) 803
BsgI GTGCAG 1 cut(s) 1179
BshFI GGCC 2 cut(s) 74, 89
BsiHKAI GWGCWC 2 cut(s) 528, 617
BsiHKCI CYCGRG 1 cut(s) 979
BsiSI CCGG 4 cut(s) 24, 272, 287, 434
BslI CCNNNNNNNGG 2 cut(s) 379, 690
BsmAI GTCTC 2 cut(s) 898, 982
BsmI GAATGC 1 cut(s) 121
BsnI GGCC 2 cut(s) 74, 89
Bso31I GGTCTC 1 cut(s) 898
BsoBI CYCGRG 1 cut(s) 979
Bsp1286I GDGCHC 2 cut(s) 528, 617
Bsp143I GATC 7 cut(s) 3, 457, 535, 572, 817, 932, 1066
Bsp19I CCATGG 1 cut(s) 582
BspACI CCGC 2 cut(s) 684, 1079
BspANI GGCC 2 cut(s) 74, 89
BspCNI CTCAG 5 cut(s) 241, 435, 853, 965, 1027
BspHI TCATGA 1 cut(s) 127
BspLI GGNNCC 1 cut(s) 567
BspMAI CTGCAG 1 cut(s) 520
BspMI ACCTGC 1 cut(s) 229
BspPI GGATC 2 cut(s) 465, 530
BspQI GCTCTTC 2 cut(s) 637, 992
BspTNI GGTCTC 1 cut(s) 898
BsrFI RCCGGY 1 cut(s) 433
BsrI ACTGG 2 cut(s) 601, 1181
BssAI RCCGGY 1 cut(s) 433
BssECI CCNNGG 2 cut(s) 582, 855
BssMI GATC 7 cut(s) 3, 457, 535, 572, 817, 932, 1066
BssNI GRCGYC 1 cut(s) 1146
BssT1I CCWWGG 1 cut(s) 582
Bst2UI CCWGG 1 cut(s) 91
Bst4CI ACNGT 1 cut(s) 1104
Bst6I CTCTTC 3 cut(s) 294, 637, 992
BstACI GRCGYC 1 cut(s) 1146
BstC8I GCNNGC 2 cut(s) 269, 435
BstDEI CTNAG 5 cut(s) 249, 443, 861, 952, 1035
BstDSI CCRYGG 2 cut(s) 582, 855
BstF5I GGATG 1 cut(s) 1149
BstH2I RGCGCY 1 cut(s) 287
BstHHI GCGC 3 cut(s) 286, 400, 442
BstKTI GATC 7 cut(s) 6, 460, 538, 575, 820, 935, 1069
BstMAI GTCTC 2 cut(s) 898, 982
BstMBI GATC 7 cut(s) 3, 457, 535, 572, 817, 932, 1066
BstMWI GCNNNNNNNGC 2 cut(s) 439, 1014
BstNI CCWGG 1 cut(s) 91
BstNSI RCATGY 1 cut(s) 1012
BstSCI CCNGG 2 cut(s) 23, 89
BstSFI CTRYAG 1 cut(s) 516
BstV1I GCAGC 2 cut(s) 424, 560
BstV2I GAAGAC 2 cut(s) 758, 1149
BstX2I RGATCY 2 cut(s) 457, 572
BstYI RGATCY 2 cut(s) 457, 572
BsuRI GGCC 2 cut(s) 74, 89
BtgI CCRYGG 2 cut(s) 582, 855
BtsCI GGATG 1 cut(s) 1149
BtsI GCAGTG 1 cut(s) 525
BtsIMutI CAGTG 2 cut(s) 525, 1188
BveI ACCTGC 1 cut(s) 229
Cac8I GCNNGC 2 cut(s) 269, 435
CaiI CAGNNNCTG 1 cut(s) 788
CciI TCATGA 1 cut(s) 127
CfoI GCGC 3 cut(s) 286, 400, 442
Cfr10I RCCGGY 1 cut(s) 433
Cfr13I GGNCC 2 cut(s) 87, 1178
CseI GACGC 1 cut(s) 1154
Csp6I GTAC 4 cut(s) 246, 370, 671, 939
CviAII CATG 7 cut(s) 128, 233, 254, 583, 936, 985, 1009
CviQI GTAC 4 cut(s) 246, 370, 671, 939
DdeI CTNAG 5 cut(s) 249, 443, 861, 952, 1035
DpnI GATC 7 cut(s) 5, 459, 537, 574, 819, 934, 1068
DpnII GATC 7 cut(s) 3, 457, 535, 572, 817, 932, 1066
Eam1104I CTCTTC 3 cut(s) 294, 637, 992
EarI CTCTTC 3 cut(s) 294, 637, 992
Ecl136II GAGCTC 2 cut(s) 526, 615
Eco130I CCWWGG 1 cut(s) 582
Eco24I GRGCYC 2 cut(s) 528, 617
Eco31I GGTCTC 1 cut(s) 898
Eco32I GATATC 1 cut(s) 325
Eco47I GGWCC 1 cut(s) 1178
Eco53kI GAGCTC 2 cut(s) 526, 615
Eco57I CTGAAG 2 cut(s) 861, 900
Eco88I CYCGRG 1 cut(s) 979
EcoICRI GAGCTC 2 cut(s) 526, 615
EcoRII CCWGG 1 cut(s) 89
EcoRV GATATC 1 cut(s) 325
EcoT14I CCWWGG 1 cut(s) 582
EcoT22I ATGCAT 1 cut(s) 234
EcoT38I GRGCYC 2 cut(s) 528, 617
ErhI CCWWGG 1 cut(s) 582
FaeI CATG 7 cut(s) 131, 236, 257, 586, 939, 988, 1012
FalI AAGNNNNNCTT 2 cut(s) 1068, 1100
FatI CATG 7 cut(s) 127, 232, 253, 582, 935, 984, 1008
FbaI TGATCA 3 cut(s) 3, 817, 1066
Fnu4HI GCNGC 2 cut(s) 438, 549
FokI GGATG 1 cut(s) 1136
FriOI GRGCYC 2 cut(s) 528, 617
Fsp4HI GCNGC 2 cut(s) 438, 549
FspBI CTAG 8 cut(s) 491, 504, 570, 627, 641, 948, 1046, 1127
GlaI GCGC 3 cut(s) 285, 399, 441
GluI GCNGC 2 cut(s) 438, 549
GsaI CCCAGC 1 cut(s) 807
HaeII RGCGCY 1 cut(s) 287
HaeIII GGCC 2 cut(s) 74, 89
HapII CCGG 4 cut(s) 24, 272, 287, 434
HgaI GACGC 1 cut(s) 1154
HhaI GCGC 3 cut(s) 286, 400, 442
Hin1I GRCGYC 1 cut(s) 1146
Hin1II CATG 7 cut(s) 131, 236, 257, 586, 939, 988, 1012
Hin6I GCGC 3 cut(s) 284, 398, 440
HinP1I GCGC 3 cut(s) 284, 398, 440
HinfI GANTC 5 cut(s) 97, 557, 779, 956, 1088
HpaII CCGG 4 cut(s) 24, 272, 287, 434
HphI GGTGA 2 cut(s) 238, 370
Hpy166II GTNNAC 4 cut(s) 18, 219, 657, 1051
Hpy188I TCNGA 5 cut(s) 45, 651, 784, 955, 1036
Hpy188III TCNNGA 7 cut(s) 79, 128, 199, 529, 776, 821, 979
Hpy8I GTNNAC 4 cut(s) 18, 219, 657, 1051
HpyAV CCTTC 2 cut(s) 448, 1132
HpyCH4III ACNGT 1 cut(s) 1104
HpyCH4IV ACGT 2 cut(s) 221, 1114
HpyCH4V TGCA 8 cut(s) 121, 232, 500, 518, 548, 1030, 1100, 1160
HpyF10VI GCNNNNNNNGC 2 cut(s) 439, 1014
HpyF3I CTNAG 5 cut(s) 249, 443, 861, 952, 1035
HpySE526I ACGT 2 cut(s) 221, 1114
Hsp92I GRCGYC 1 cut(s) 1146
Hsp92II CATG 7 cut(s) 131, 236, 257, 586, 939, 988, 1012
HspAI GCGC 3 cut(s) 284, 398, 440
KroI GCCGGC 1 cut(s) 433
KroNI GCCGGC 1 cut(s) 435
Ksp22I TGATCA 3 cut(s) 3, 817, 1066
Kzo9I GATC 7 cut(s) 3, 457, 535, 572, 817, 932, 1066
LguI GCTCTTC 2 cut(s) 637, 992
LmnI GCTCC 7 cut(s) 27, 523, 565, 620, 823, 923, 1081
Lsp1109I GCAGC 2 cut(s) 424, 560
LweI GCATC 3 cut(s) 219, 509, 1087
MaeI CTAG 8 cut(s) 491, 504, 570, 627, 641, 948, 1046, 1127
MaeII ACGT 2 cut(s) 221, 1114
MaeIII GTNAC 2 cut(s) 161, 358
MalI GATC 7 cut(s) 5, 459, 537, 574, 819, 934, 1068
MboI GATC 7 cut(s) 3, 457, 535, 572, 817, 932, 1066
MfeI CAATTG 1 cut(s) 1092
MflI RGATCY 2 cut(s) 457, 572
MhlI GDGCHC 2 cut(s) 528, 617
MluCI AATT 2 cut(s) 761, 1092
MlyI GAGTC 1 cut(s) 1082
MmeI TCCRAC 1 cut(s) 901
MnlI CCTC 6 cut(s) 144, 187, 295, 405, 645, 684
Mph1103I ATGCAT 1 cut(s) 234
MroNI GCCGGC 1 cut(s) 433
MroXI GAANNNNTTC 1 cut(s) 473
MseI TTAA 1 cut(s) 680
MslI CAYNNNNRTG 3 cut(s) 57, 126, 1062
MspA1I CMGCKG 1 cut(s) 551
MspI CCGG 4 cut(s) 24, 272, 287, 434
MspR9I CCNGG 2 cut(s) 25, 91
MunI CAATTG 1 cut(s) 1092
Mva1269I GAATGC 1 cut(s) 121
MvaI CCWGG 1 cut(s) 91
MwoI GCNNNNNNNGC 2 cut(s) 439, 1014
NaeI GCCGGC 1 cut(s) 435
NciI CCSGG 1 cut(s) 25
NcoI CCATGG 1 cut(s) 582
NdeII GATC 7 cut(s) 3, 457, 535, 572, 817, 932, 1066
NgoMIV GCCGGC 1 cut(s) 433
NlaIII CATG 7 cut(s) 131, 236, 257, 586, 939, 988, 1012
NlaIV GGNNCC 1 cut(s) 567
NmuCI GTSAC 2 cut(s) 161, 358
NsiI ATGCAT 1 cut(s) 234
NspI RCATGY 1 cut(s) 1012
PaeR7I CTCGAG 1 cut(s) 979
PagI TCATGA 1 cut(s) 127
PciSI GCTCTTC 2 cut(s) 637, 992
PctI GAATGC 1 cut(s) 121
PdiI GCCGGC 1 cut(s) 435
PdmI GAANNNNTTC 1 cut(s) 473
PfeI GAWTC 4 cut(s) 97, 557, 779, 956
PfoI TCCNGGA 1 cut(s) 23
PkrI GCNGC 2 cut(s) 439, 550
PleI GAGTC 1 cut(s) 1082
PpsI GAGTC 1 cut(s) 1082
PsiI TTATAA 2 cut(s) 309, 378
Psp124BI GAGCTC 2 cut(s) 528, 617
Psp1406I AACGTT 1 cut(s) 1114
Psp6I CCWGG 1 cut(s) 89
PspFI CCCAGC 1 cut(s) 803
PspGI CCWGG 1 cut(s) 89
PspN4I GGNNCC 1 cut(s) 567
PspPI GGNCC 2 cut(s) 87, 1178
PstI CTGCAG 1 cut(s) 520
PstNI CAGNNNCTG 1 cut(s) 788
PsuI RGATCY 2 cut(s) 457, 572
PvuII CAGCTG 1 cut(s) 551
RsaI GTAC 4 cut(s) 247, 371, 672, 940
RsaNI GTAC 4 cut(s) 246, 370, 671, 939
RseI CAYNNNNRTG 3 cut(s) 57, 126, 1062
SacI GAGCTC 2 cut(s) 528, 617
SapI GCTCTTC 2 cut(s) 637, 992
SaqAI TTAA 1 cut(s) 680
SatI GCNGC 2 cut(s) 438, 549
Sau3AI GATC 7 cut(s) 3, 457, 535, 572, 817, 932, 1066
Sau96I GGNCC 2 cut(s) 87, 1178
ScaI AGTACT 1 cut(s) 247
SchI GAGTC 1 cut(s) 1082
ScrFI CCNGG 2 cut(s) 25, 91
SduI GDGCHC 2 cut(s) 528, 617
SfaNI GCATC 3 cut(s) 219, 509, 1087
SfcI CTRYAG 1 cut(s) 516
Sfr274I CTCGAG 1 cut(s) 979
SinI GGWCC 1 cut(s) 1178
SlaI CTCGAG 1 cut(s) 979
SmiMI CAYNNNNRTG 3 cut(s) 57, 126, 1062
SmlI CTYRAG 3 cut(s) 101, 721, 979
SmoI CTYRAG 3 cut(s) 101, 721, 979
Sse9I AATT 2 cut(s) 761, 1092
SsiI CCGC 2 cut(s) 684, 1079
SspMI CTAG 8 cut(s) 491, 504, 570, 627, 641, 948, 1046, 1127
SstI GAGCTC 2 cut(s) 528, 617
StyD4I CCNGG 2 cut(s) 23, 89
StyI CCWWGG 1 cut(s) 582
TaaI ACNGT 1 cut(s) 1104
TaiI ACGT 2 cut(s) 224, 1117
TaqI TCGA 6 cut(s) 63, 351, 388, 759, 797, 980
TasI AATT 2 cut(s) 761, 1092
TatI WGTACW 2 cut(s) 245, 670
TfiI GAWTC 4 cut(s) 97, 557, 779, 956
Tru1I TTAA 1 cut(s) 680
Tru9I TTAA 1 cut(s) 680
TscAI CASTG 2 cut(s) 525, 1188
TseFI GTSAC 2 cut(s) 161, 358
TseI GCWGC 2 cut(s) 437, 548
Tsp45I GTSAC 2 cut(s) 161, 358
TspDTI ATGAA 6 cut(s) 134, 270, 312, 466, 899, 1151
TspGWI ACGGA 2 cut(s) 23, 528
TspRI CASTG 2 cut(s) 525, 1188
VpaK11BI GGWCC 1 cut(s) 1178
XapI RAATTY 1 cut(s) 761
XceI RCATGY 1 cut(s) 1012
XhoI CTCGAG 1 cut(s) 979
XmnI GAANNNNTTC 1 cut(s) 473
XspI CTAG 8 cut(s) 491, 504, 570, 627, 641, 948, 1046, 1127
ZrmI AGTACT 1 cut(s) 247
Zsp2I ATGCAT 1 cut(s) 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.