MD06G1114700.v1.1

FAS-associated factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0012942
Physical Location & Seq
Forward (+)
25405428 .. 25409093
3666 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1114700.v1.1.491

Sequence Viewer

Length: 1419 bp
ATGGTCGATGTGAACGACAAGTTAGCGTATTTCCAAGCGATCACAGGCCTCGAAGACTCCGATTTGTGCGTGGAGATCCTCACCGCCCATGGCTGGGACCTCGAGCTCGCGATCTCCTCCTTCACCACCACCTCGAACCATACACGTTCGCCGGAAGATCCATCTGCCGCCGGAACCTCCACAGTCTCCGATGCCGGCGGTGGGGACGGTCTTCGCTCCATTCCTCAACCGTCGTACCAATCTGGACAGTCGTCAAACGCCGTCGCGGCACCCGGTTTGGCTTGGAGGATCATAACTCTACCGATTTCTGTTATTTCTGGTAGTCTAGGTTTGATTTCTGGCGCGGTTGGGCTCGGGTTGTGGGCGGCGGGTGGAGTGCTATCGTACTCGCTCGGAATGATTGGGGTCGGGGCTGGTCGGGACGGTGAGGCCTCGGCCCGATTAGTGTCGGTGTCGGAGGTGGGGAATGAAGCAGCGCAGTTTGTAGCGAGGTTCGAGCAGGATTTTGGGACGAGGAGGCCGAATTTCGTCAGCGAAGGGTTTATGGACGCCCTGCAGAGGTCGAGGAACTCGTTCAAGCTGTTGTTCGTATACTTGCACTCGCCAGACCATCTTGATACGCCGTCTTTTTGTGAGAGGACTTTGTGCTCCGAGATGTTGGTGGATTATATCAATGAGAATTTCGTGTCGTGGGGAGGGAGCATTCGGGCTAGTGAAGGCTTCAAGATGAGTAATAGTTTGAAGGCCTCGAGATATCCCTTCTGTGCCGTTGTTATGGCTGCCACGAACCAGAGGATCGTGCTGCTTCAGCAGGTTGAAGGGCTGAAGTCTCCTGAAGAAATGCTCTCAATACTAAATAGAGTGGTTGAAGAAAGTGCTTCTGTTCTTGGTGTAGCAAGGCATGAGGCAGAAGAAAGGAGAATGAACATTCGTTTAAGGGAGGAGCAAGATGCTGCTTATAGAGCAGCACTTGAAGCTGATCAGGCGAGGGAAAACCAGAGGAGGGAAGAGCAAGAACGTTTAGAAAGAGAAGCTGCTGAAGCTGAGCAGAAGCGCCAGGAAGAAGAAGAGGCTCTTGAAAGAGCAGCACAGGAAGCTGCGGAGAAAGAAGCTGCATTAGCTAGGATGCGGCAGGAAAAAGCCTTGTCACTTGGTGCCGAACCTGAAAAAGGACCTGACGTTACACAGGTTGTGGTCCGGTTCCCAACTGGACAACGCAAGGAAAGGAGATTCCACAGCACTGCATTAATCCAAAATCTCTATGATTTTGTTGATTCTTTGGGTTGTCAAGACGCTGAGAACTACAGTTTGGTGTCGAACTTCCCTCGAGTCGTATACGGACCAGAGAAGTTGTCTTTATCCTTGAAAGAAGCAGGATTGCATCCACAGGCCAGTCTTTTTCTGGAGCTGAATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UBA_4 UBX

Protein Analysis

473

Amino Acids

51.66

Weight (kDa)

4.92

Isoelectric Point (pI)

43.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_4 PF14555 6 - 42 1.5e-10 UBA-like domain
FAF1 PF21021 161 - 235 2.4e-11 Fas-associated factor 1
UBX PF00789 390 - 469 9.5e-20 UBX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012942)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G10790
fragaria_vesca FvH4_5g11270
malus_domestica MD06G1114700.v1.1 MD14G1136100.v1.1
prunus_persica Prupe.5G127400_v2.0.a1
pyrus_communis pycom06g10750 pycom14g10960 pycom14g10970
rosa_chinensis RchiOBHm_Chr7g0186581
rosa_laevigata RLG00000004830
rosa_multiflora Rmu_sc0007722.1_g000020
rosa_rugosa Rorug06G0475200
rosa_samantha Rh7AG065700 Rh7BG081600 Rh7CG082100 Rh7DG083100
rosa_wichuraiana Rw7G006910 Rw7G007130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 802
AccB1I GGYRCC 2 cut(s) 268, 1154
AccI GTMKAC 2 cut(s) 591, 1335
AccII CGCG 3 cut(s) 110, 266, 344
AciI CCGC 9 cut(s) 84, 168, 198, 266, 344, 365, 368, 1100, 1129
AclI AACGTT 1 cut(s) 1018
AclWI GGATC 4 cut(s) 70, 152, 296, 803
AcsI RAATTY 3 cut(s) 523, 679, 1411
AcuI CTGAAG 4 cut(s) 791, 845, 855, 1059
AcyI GRCGYC 1 cut(s) 549
AdeI CACNNNGTG 1 cut(s) 1154
AfaI GTAC 2 cut(s) 236, 386
AfiI CCNNNNNNNGG 6 cut(s) 93, 94, 201, 558, 1003, 1169
AflIII ACRYGT 1 cut(s) 143
AgsI TTSAA 8 cut(s) 577, 724, 742, 818, 869, 974, 1079, 1366
AjnI CCWGG 1 cut(s) 1056
AjuI GAANNNNNNNTTGG 2 cut(s) 1292, 1324
AluBI AGCT 9 cut(s) 106, 580, 977, 1034, 1043, 1097, 1112, 1121, 1408
AluI AGCT 9 cut(s) 106, 580, 977, 1034, 1043, 1097, 1112, 1121, 1408
Alw21I GWGCWC 2 cut(s) 108, 650
Alw26I GTCTC 2 cut(s) 190, 834
AlwI GGATC 4 cut(s) 70, 152, 296, 803
Ama87I CYCGRG 4 cut(s) 101, 353, 748, 1326
AoxI GGCC 6 cut(s) 46, 429, 435, 518, 744, 1389
ApeKI GCWGC 9 cut(s) 473, 779, 802, 953, 965, 1034, 1085, 1097, 1112
ApoI RAATTY 3 cut(s) 523, 679, 1411
AseI ATTAAT 1 cut(s) 1247
Asp700I GAANNNNTTC 1 cut(s) 572
AspLEI GCGC 3 cut(s) 344, 478, 1056
AspS9I GGNCC 5 cut(s) 97, 436, 1172, 1195, 1340
AsuC2I CCSGG 1 cut(s) 273
AsuHPI GGTGA 3 cut(s) 73, 115, 437
AvaI CYCGRG 4 cut(s) 101, 353, 748, 1326
AvaII GGWCC 4 cut(s) 97, 1172, 1195, 1340
BaeI ACNNNNGTAYC 2 cut(s) 218, 251
BanI GGYRCC 2 cut(s) 268, 1154
BanII GRGCYC 2 cut(s) 108, 354
BbsI GAAGAC 2 cut(s) 60, 203
Bbv12I GWGCWC 2 cut(s) 108, 650
BbvI GCAGC 9 cut(s) 485, 766, 789, 940, 977, 1021, 1084, 1097, 1099
BccI CCATC 2 cut(s) 169, 618
BceAI ACGGC 3 cut(s) 245, 607, 752
BciT130I CCWGG 1 cut(s) 1058
BclI TGATCA 1 cut(s) 979
BcnI CCSGG 1 cut(s) 273
BcoDI GTCTC 2 cut(s) 190, 834
BfaI CTAG 3 cut(s) 326, 711, 1122
BfmI CTRYAG 2 cut(s) 554, 1303
BfoI RGCGCY 1 cut(s) 1057
BfuAI ACCTGC 1 cut(s) 802
BglI GCCNNNNNGGC 1 cut(s) 266
BlpI GCTNAGC 1 cut(s) 1044
Bme1390I CCNGG 2 cut(s) 273, 1058
Bme18I GGWCC 4 cut(s) 97, 1172, 1195, 1340
BmeT110I CYCGRG 4 cut(s) 101, 353, 748, 1326
BmgT120I GGNCC 5 cut(s) 97, 436, 1172, 1195, 1340
BmiI GGNNCC 5 cut(s) 98, 175, 270, 1156, 1202
BmrFI CCNGG 2 cut(s) 273, 1058
BmsI GCATC 4 cut(s) 181, 940, 1116, 1390
BoxI GACNNNNGTC 1 cut(s) 250
BpiI GAAGAC 2 cut(s) 60, 203
Bpu1102I GCTNAGC 1 cut(s) 1044
BpuMI CCSGG 1 cut(s) 273
BsaHI GRCGYC 1 cut(s) 549
BsaJI CCNNGG 2 cut(s) 88, 432
BsaWI WCCGGW 1 cut(s) 1197
Bsc4I CCNNNNNNNGG 6 cut(s) 93, 94, 201, 558, 1003, 1169
Bse118I RCCGGY 1 cut(s) 194
Bse1I ACTGG 2 cut(s) 1213, 1392
BseBI CCWGG 1 cut(s) 1058
BseDI CCNNGG 2 cut(s) 88, 432
BseGI GGATG 2 cut(s) 1131, 1381
BseLI CCNNNNNNNGG 6 cut(s) 93, 94, 201, 558, 1003, 1169
BseMII CTCAG 2 cut(s) 1035, 1287
BseNI ACTGG 2 cut(s) 1213, 1392
BseRI GAGGAG 4 cut(s) 106, 529, 956, 1015
BseXI GCAGC 9 cut(s) 485, 766, 789, 940, 977, 1021, 1084, 1097, 1099
BseYI CCCAGC 1 cut(s) 93
Bsh1236I CGCG 3 cut(s) 110, 266, 344
BshFI GGCC 6 cut(s) 48, 431, 437, 520, 746, 1391
BshNI GGYRCC 2 cut(s) 268, 1154
BsiHKAI GWGCWC 2 cut(s) 108, 650
BsiHKCI CYCGRG 4 cut(s) 101, 353, 748, 1326
BsiSI CCGG 5 cut(s) 152, 171, 195, 273, 1198
BslFI GGGAC 4 cut(s) 110, 218, 434, 523
BslI CCNNNNNNNGG 6 cut(s) 93, 94, 201, 558, 1003, 1169
BsmAI GTCTC 2 cut(s) 190, 834
BsmFI GGGAC 4 cut(s) 110, 218, 434, 523
BsmI GAATGC 1 cut(s) 702
BsnI GGCC 6 cut(s) 48, 431, 437, 520, 746, 1391
BsoBI CYCGRG 4 cut(s) 101, 353, 748, 1326
Bsp1286I GDGCHC 3 cut(s) 108, 354, 650
Bsp143I GATC 7 cut(s) 39, 75, 111, 157, 288, 795, 979
Bsp1720I GCTNAGC 1 cut(s) 1044
Bsp19I CCATGG 1 cut(s) 88
Bsp68I TCGCGA 1 cut(s) 110
BspACI CCGC 9 cut(s) 84, 168, 198, 266, 344, 365, 368, 1100, 1129
BspANI GGCC 6 cut(s) 48, 431, 437, 520, 746, 1391
BspCNI CTCAG 2 cut(s) 1036, 1288
BspFNI CGCG 3 cut(s) 110, 266, 344
BspLI GGNNCC 5 cut(s) 98, 175, 270, 1156, 1202
BspMAI CTGCAG 1 cut(s) 558
BspMI ACCTGC 1 cut(s) 802
BspPI GGATC 4 cut(s) 70, 152, 296, 803
BspQI GCTCTTC 1 cut(s) 1002
BspT107I GGYRCC 2 cut(s) 268, 1154
BsrFI RCCGGY 1 cut(s) 194
BsrI ACTGG 2 cut(s) 1213, 1392
BssAI RCCGGY 1 cut(s) 194
BssECI CCNNGG 2 cut(s) 88, 432
BssMI GATC 7 cut(s) 39, 75, 111, 157, 288, 795, 979
BssNAI GTATAC 2 cut(s) 592, 1336
BssNI GRCGYC 1 cut(s) 549
BssT1I CCWWGG 1 cut(s) 88
Bst1107I GTATAC 2 cut(s) 592, 1336
Bst2UI CCWGG 1 cut(s) 1058
Bst4CI ACNGT 6 cut(s) 184, 209, 231, 249, 425, 1307
Bst6I CTCTTC 2 cut(s) 1002, 1062
BstACI GRCGYC 1 cut(s) 549
BstC8I GCNNGC 2 cut(s) 108, 196
BstDEI CTNAG 2 cut(s) 1044, 1296
BstDSI CCRYGG 1 cut(s) 88
BstENI CCTNNNNNAGG 1 cut(s) 1167
BstF5I GGATG 2 cut(s) 1131, 1381
BstFNI CGCG 3 cut(s) 110, 266, 344
BstH2I RGCGCY 1 cut(s) 1057
BstHHI GCGC 3 cut(s) 344, 478, 1056
BstKTI GATC 7 cut(s) 42, 78, 114, 160, 291, 798, 982
BstMAI GTCTC 2 cut(s) 190, 834
BstMBI GATC 7 cut(s) 39, 75, 111, 157, 288, 795, 979
BstMWI GCNNNNNNNGC 8 cut(s) 266, 808, 962, 974, 983, 1040, 1094, 1118
BstNI CCWGG 1 cut(s) 1058
BstPAI GACNNNNGTC 1 cut(s) 250
BstSCI CCNGG 2 cut(s) 271, 1056
BstSFI CTRYAG 2 cut(s) 554, 1303
BstUI CGCG 3 cut(s) 110, 266, 344
BstV1I GCAGC 9 cut(s) 485, 766, 789, 940, 977, 1021, 1084, 1097, 1099
BstV2I GAAGAC 2 cut(s) 60, 203
BstX2I RGATCY 2 cut(s) 75, 157
BstYI RGATCY 2 cut(s) 75, 157
BstZ17I GTATAC 2 cut(s) 592, 1336
BsuRI GGCC 6 cut(s) 48, 431, 437, 520, 746, 1391
BtgI CCRYGG 1 cut(s) 88
BtsCI GGATG 2 cut(s) 1131, 1381
BtsI GCAGTG 1 cut(s) 1239
BtsIMutI CAGTG 1 cut(s) 1239
BtuMI TCGCGA 1 cut(s) 110
BveI ACCTGC 1 cut(s) 802
Cac8I GCNNGC 2 cut(s) 108, 196
CfoI GCGC 3 cut(s) 344, 478, 1056
Cfr10I RCCGGY 1 cut(s) 194
Cfr13I GGNCC 5 cut(s) 97, 436, 1172, 1195, 1340
CseI GACGC 2 cut(s) 557, 1301
Csp6I GTAC 2 cut(s) 235, 385
CviAII CATG 2 cut(s) 89, 902
CviQI GTAC 2 cut(s) 235, 385
DdeI CTNAG 2 cut(s) 1044, 1296
DpnI GATC 7 cut(s) 41, 77, 113, 159, 290, 797, 981
DpnII GATC 7 cut(s) 39, 75, 111, 157, 288, 795, 979
DraIII CACNNNGTG 1 cut(s) 1154
Eam1104I CTCTTC 2 cut(s) 1002, 1062
EarI CTCTTC 2 cut(s) 1002, 1062
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 1 cut(s) 88
Eco147I AGGCCT 3 cut(s) 48, 431, 746
Eco24I GRGCYC 2 cut(s) 108, 354
Eco32I GATATC 1 cut(s) 755
Eco47I GGWCC 4 cut(s) 97, 1172, 1195, 1340
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 4 cut(s) 791, 845, 855, 1059
Eco88I CYCGRG 4 cut(s) 101, 353, 748, 1326
EcoICRI GAGCTC 1 cut(s) 106
EcoNI CCTNNNNNAGG 1 cut(s) 1167
EcoO109I RGGNCCY 2 cut(s) 97, 1172
EcoRI GAATTC 1 cut(s) 1411
EcoRII CCWGG 1 cut(s) 1056
EcoRV GATATC 1 cut(s) 755
EcoT14I CCWWGG 1 cut(s) 88
EcoT38I GRGCYC 2 cut(s) 108, 354
ErhI CCWWGG 1 cut(s) 88
FaeI CATG 2 cut(s) 92, 905
FalI AAGNNNNNCTT 2 cut(s) 1059, 1091
FaqI GGGAC 4 cut(s) 110, 218, 434, 523
FatI CATG 2 cut(s) 88, 901
FauI CCCGC 1 cut(s) 361
FbaI TGATCA 1 cut(s) 979
FblI GTMKAC 2 cut(s) 591, 1335
FokI GGATG 2 cut(s) 1138, 1368
FriOI GRGCYC 2 cut(s) 108, 354
FspBI CTAG 3 cut(s) 326, 711, 1122
GlaI GCGC 3 cut(s) 343, 477, 1055
GsaI CCCAGC 1 cut(s) 97
HaeII RGCGCY 1 cut(s) 1057
HaeIII GGCC 6 cut(s) 48, 431, 437, 520, 746, 1391
HapII CCGG 5 cut(s) 152, 171, 195, 273, 1198
HgaI GACGC 2 cut(s) 557, 1301
HhaI GCGC 3 cut(s) 344, 478, 1056
Hin1I GRCGYC 1 cut(s) 549
Hin1II CATG 2 cut(s) 92, 905
Hin6I GCGC 3 cut(s) 342, 476, 1054
HinP1I GCGC 3 cut(s) 342, 476, 1054
HinfI GANTC 4 cut(s) 56, 1230, 1274, 1329
HpaII CCGG 5 cut(s) 152, 171, 195, 273, 1198
HphI GGTGA 3 cut(s) 73, 115, 437
Hpy166II GTNNAC 3 cut(s) 13, 592, 1336
Hpy188I TCNGA 5 cut(s) 61, 190, 395, 457, 652
Hpy8I GTNNAC 3 cut(s) 13, 592, 1336
Hpy99I CGWCG 2 cut(s) 235, 266
HpyAV CCTTC 6 cut(s) 130, 530, 710, 736, 769, 812
HpyCH4III ACNGT 6 cut(s) 184, 209, 231, 249, 425, 1307
HpyCH4IV ACGT 3 cut(s) 145, 1018, 1179
HpyCH4V TGCA 5 cut(s) 556, 598, 1115, 1244, 1381
HpyF10VI GCNNNNNNNGC 8 cut(s) 266, 808, 962, 974, 983, 1040, 1094, 1118
HpyF3I CTNAG 2 cut(s) 1044, 1296
HpySE526I ACGT 3 cut(s) 145, 1018, 1179
Hsp92I GRCGYC 1 cut(s) 549
Hsp92II CATG 2 cut(s) 92, 905
HspAI GCGC 3 cut(s) 342, 476, 1054
KroI GCCGGC 1 cut(s) 194
KroNI GCCGGC 1 cut(s) 196
Ksp22I TGATCA 1 cut(s) 979
Kzo9I GATC 7 cut(s) 39, 75, 111, 157, 288, 795, 979
LguI GCTCTTC 1 cut(s) 1002
LmnI GCTCC 5 cut(s) 221, 653, 699, 943, 1405
Lsp1109I GCAGC 9 cut(s) 485, 766, 789, 940, 977, 1021, 1084, 1097, 1099
LweI GCATC 4 cut(s) 181, 940, 1116, 1390
MaeI CTAG 3 cut(s) 326, 711, 1122
MaeII ACGT 3 cut(s) 145, 1018, 1179
MaeIII GTNAC 2 cut(s) 1146, 1180
MalI GATC 7 cut(s) 41, 77, 113, 159, 290, 797, 981
MboI GATC 7 cut(s) 39, 75, 111, 157, 288, 795, 979
MflI RGATCY 2 cut(s) 75, 157
MhlI GDGCHC 3 cut(s) 108, 354, 650
MluCI AATT 3 cut(s) 523, 679, 1411
MlyI GAGTC 2 cut(s) 50, 1338
MmeI TCCRAC 1 cut(s) 435
MroNI GCCGGC 1 cut(s) 194
MroXI GAANNNNTTC 1 cut(s) 572
MseI TTAA 2 cut(s) 935, 1247
MspI CCGG 5 cut(s) 152, 171, 195, 273, 1198
MspR9I CCNGG 2 cut(s) 273, 1058
Mva1269I GAATGC 1 cut(s) 702
MvaI CCWGG 1 cut(s) 1058
MvnI CGCG 3 cut(s) 110, 266, 344
MwoI GCNNNNNNNGC 8 cut(s) 266, 808, 962, 974, 983, 1040, 1094, 1118
NaeI GCCGGC 1 cut(s) 196
NciI CCSGG 1 cut(s) 273
NcoI CCATGG 1 cut(s) 88
NdeII GATC 7 cut(s) 39, 75, 111, 157, 288, 795, 979
NgoMIV GCCGGC 1 cut(s) 194
NlaIII CATG 2 cut(s) 92, 905
NlaIV GGNNCC 5 cut(s) 98, 175, 270, 1156, 1202
NmeAIII GCCGAG 1 cut(s) 413
NmuCI GTSAC 1 cut(s) 1146
NruI TCGCGA 1 cut(s) 110
PaeR7I CTCGAG 3 cut(s) 101, 748, 1326
PceI AGGCCT 3 cut(s) 48, 431, 746
PciSI GCTCTTC 1 cut(s) 1002
PcsI WCGNNNNNNNCGW 4 cut(s) 12, 57, 518, 569
PctI GAATGC 1 cut(s) 702
PdiI GCCGGC 1 cut(s) 196
PdmI GAANNNNTTC 1 cut(s) 572
PfeI GAWTC 2 cut(s) 1230, 1274
PleI GAGTC 2 cut(s) 50, 1337
PpsI GAGTC 2 cut(s) 50, 1337
PpuMI RGGWCCY 2 cut(s) 97, 1172
PshAI GACNNNNGTC 1 cut(s) 250
PshBI ATTAAT 1 cut(s) 1247
Psp124BI GAGCTC 1 cut(s) 108
Psp1406I AACGTT 1 cut(s) 1018
Psp5II RGGWCCY 2 cut(s) 97, 1172
Psp6I CCWGG 1 cut(s) 1056
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 1 cut(s) 1056
PspN4I GGNNCC 5 cut(s) 98, 175, 270, 1156, 1202
PspPI GGNCC 5 cut(s) 97, 436, 1172, 1195, 1340
PspPPI RGGWCCY 2 cut(s) 97, 1172
PspXI VCTCGAGB 2 cut(s) 101, 1326
PstI CTGCAG 1 cut(s) 558
PsuI RGATCY 2 cut(s) 75, 157
RruI TCGCGA 1 cut(s) 110
RsaI GTAC 2 cut(s) 236, 386
RsaNI GTAC 2 cut(s) 235, 385
SacI GAGCTC 1 cut(s) 108
SapI GCTCTTC 1 cut(s) 1002
SaqAI TTAA 2 cut(s) 935, 1247
Sau3AI GATC 7 cut(s) 39, 75, 111, 157, 288, 795, 979
Sau96I GGNCC 5 cut(s) 97, 436, 1172, 1195, 1340
SchI GAGTC 2 cut(s) 50, 1338
ScrFI CCNGG 2 cut(s) 273, 1058
SduI GDGCHC 3 cut(s) 108, 354, 650
SfaNI GCATC 4 cut(s) 181, 940, 1116, 1390
SfcI CTRYAG 2 cut(s) 554, 1303
Sfr274I CTCGAG 3 cut(s) 101, 748, 1326
SinI GGWCC 4 cut(s) 97, 1172, 1195, 1340
SlaI CTCGAG 3 cut(s) 101, 748, 1326
SmlI CTYRAG 3 cut(s) 101, 748, 1326
SmoI CTYRAG 3 cut(s) 101, 748, 1326
Sse9I AATT 3 cut(s) 523, 679, 1411
SseBI AGGCCT 3 cut(s) 48, 431, 746
SsiI CCGC 9 cut(s) 84, 168, 198, 266, 344, 365, 368, 1100, 1129
SspMI CTAG 3 cut(s) 326, 711, 1122
SstI GAGCTC 1 cut(s) 108
StuI AGGCCT 3 cut(s) 48, 431, 746
StyD4I CCNGG 2 cut(s) 271, 1056
StyI CCWWGG 1 cut(s) 88
TaaI ACNGT 6 cut(s) 184, 209, 231, 249, 425, 1307
TaiI ACGT 3 cut(s) 148, 1021, 1182
TaqI TCGA 9 cut(s) 6, 51, 102, 134, 495, 563, 749, 1316, 1327
TasI AATT 3 cut(s) 523, 679, 1411
TauI GCSGC 4 cut(s) 170, 269, 368, 1132
TfiI GAWTC 2 cut(s) 1230, 1274
Tru1I TTAA 2 cut(s) 935, 1247
Tru9I TTAA 2 cut(s) 935, 1247
TscAI CASTG 1 cut(s) 1246
TseFI GTSAC 1 cut(s) 1146
TseI GCWGC 9 cut(s) 473, 779, 802, 953, 965, 1034, 1085, 1097, 1112
Tsp45I GTSAC 1 cut(s) 1146
TspDTI ATGAA 2 cut(s) 483, 938
TspGWI ACGGA 1 cut(s) 1353
TspRI CASTG 1 cut(s) 1246
VpaK11BI GGWCC 4 cut(s) 97, 1172, 1195, 1340
VspI ATTAAT 1 cut(s) 1247
XagI CCTNNNNNAGG 1 cut(s) 1167
XapI RAATTY 3 cut(s) 523, 679, 1411
XcmI CCANNNNNNNNNTGG 1 cut(s) 1399
XhoI CTCGAG 3 cut(s) 101, 748, 1326
XmiI GTMKAC 2 cut(s) 591, 1335
XmnI GAANNNNTTC 1 cut(s) 572
XspI CTAG 3 cut(s) 326, 711, 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.