RchiOBHm_Chr7g0186581

FAS-associated factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0012942
Physical Location & Seq
Forward (+)
6457155 .. 6460474
3320 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16655

Sequence Viewer

Length: 1404 bp
ATGAGTGATCCGAGCGACAAGTTAGCGTATTTCCAAGCGATCACGGGTCTTGAAGACTCCGATTTGTGCGTCGAGATCCTCACCGCCCATGGCTGGGACCTCGAGCTCGCGATCTCCTCCTTCACCACCCCCGAGAACCACACCCCTCCGCCGCCGGAGAATCACGCCGCCGGCACCTCCTCTACTGTCTCTGACGCCGGCGAGGCCTCGCAGTTCGTTTCTCATTCCGGATCGCCTCCGAACGCCGCGGTGGCTCCCGGGCTGGTCTGGAGGGTGATTACTCTGCCGATTTCGGTCATTTCCGGTGGTCTAGGGTTGATTTCCGGCGCGATTGGGCTTGGTATGTGGGCCGCGGGAGGCGTGCTGTCGTACTCGCTCGGGATGATTGGGCTGGGCCCGGGCCGGGGAGGCGAGGGCTCGGCGAGGTTAGTGTCGGTGTCGGCTGTGGCGACGGAGGCGATGGAATTCGTGGCGAGTTTCGAGAGGGATTATGGGACGAGGGGCCCGAATTTCGTGAGCGAAGGGTTTATGGAGGCGTTGCAGAGATCGAGGAACTCGTTCAAGCTGTTGTTTGTGTACTTGCACTCGCCGGAACACCCCGATACGCCGTCGTTCTGCGAGAGGACTCTGTGCTCCGAGGCCTTGGCGGCTTATATCAACGAGAACTTTGTGTCGTGGGGAGGGAGCATTCGGGCCAGTGAGGGATTCAAGATGAGTAACAGTTTGAAGGCCTCGAGGTTTCCTTTCTGTGCAGCTGTAATGGCTGCCACGAACCAGAGGATTGTGCTGCTTCAGCAGGTTGAGGGACCAAGATCTCCTGAAGAAATGCTTTCAGTACTGAACAGAGTGGTTGAAGAAAGTGCTTCTGTTCTTGTTTCAGCGAGGCTTGAGGCAGAAGAAAGGAGAAACAACATACGTTTAAGGGAGGAGCAGGATGCTGCTTATAGAGCAGCACTCGAAGCTGATCGAGCAAGGGAAAATCAGATGAGAGAAGAGCAAGAACGCCTGGAAAGAGAAGTTGCTGAAGCTGAGAGGAAGCGTAAGGAGGAAGAAGAGGCTCGTGAGAGAGAAGCACGTGAAGCTGCTGAGAGAGAAGCGGAACGAGCTAGGATACGTCAGGAGAAGGCCTTGGCCCTTGGTGCTGAACCAGAGAAAGGACCTGATGTTACACGAGTTTTGGTGAGGTTCCCAGCCGGAGAACGCAAGGAAAGAAGGTTCCACCGTACCACTACAATCCAGTCTCTATATGATTATGTTGACTCTTTGGGTTGCTTGGACGTCGATGATTACAGTCTGGTCTCTAACTTTCCCCGGGTGGTATATGGTCCAGAGAAGGCCAACTTAAACTTGAAAGAAGCAGGGTTGCATCCTCAAGCCAGCCTTTTTGTGGAGCTGAATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UBA_4 UBX

Protein Analysis

467

Amino Acids

51.21

Weight (kDa)

5.07

Isoelectric Point (pI)

39.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_4 PF14555 6 - 42 1.2e-10 UBA-like domain
FAF1 PF21021 156 - 234 9e-11 Fas-associated factor 1
UBX PF00789 385 - 464 6.6e-19 UBX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012942)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G10790
fragaria_vesca FvH4_5g11270
malus_domestica MD06G1114700.v1.1 MD14G1136100.v1.1
prunus_persica Prupe.5G127400_v2.0.a1
pyrus_communis pycom06g10750 pycom14g10960 pycom14g10970
rosa_chinensis RchiOBHm_Chr7g0186581
rosa_laevigata RLG00000004830
rosa_multiflora Rmu_sc0007722.1_g000020
rosa_rugosa Rorug06G0475200
rosa_samantha Rh7AG065700 Rh7BG081600 Rh7CG082100 Rh7DG083100
rosa_wichuraiana Rw7G006910 Rw7G007130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1281
AbsI CCTCGAGG 1 cut(s) 733
Acc36I ACCTGC 1 cut(s) 787
AccB1I GGYRCC 1 cut(s) 173
AccII CGCG 4 cut(s) 110, 248, 329, 353
AccIII TCCGGA 1 cut(s) 227
AclWI GGATC 3 cut(s) 2, 70, 238
AcsI RAATTY 3 cut(s) 464, 508, 1396
AcuI CTGAAG 3 cut(s) 776, 840, 1044
AcvI CACGTG 1 cut(s) 1076
AcyI GRCGYC 2 cut(s) 195, 1278
AfaI GTAC 4 cut(s) 371, 578, 837, 1225
AfiI CCNNNNNNNGG 6 cut(s) 93, 94, 403, 404, 1154, 1387
AgsI TTSAA 6 cut(s) 53, 562, 709, 727, 854, 1351
AjnI CCWGG 1 cut(s) 1005
AloI GAACNNNNNNTCC 2 cut(s) 1199, 1231
AluBI AGCT 8 cut(s) 106, 565, 755, 962, 1028, 1082, 1106, 1393
AluI AGCT 8 cut(s) 106, 565, 755, 962, 1028, 1082, 1106, 1393
Alw21I GWGCWC 2 cut(s) 108, 635
Alw26I GTCTC 3 cut(s) 193, 1245, 1303
AlwI GGATC 3 cut(s) 2, 70, 238
Ama87I CYCGRG 7 cut(s) 101, 131, 257, 377, 397, 733, 1311
Aor13HI TCCGGA 1 cut(s) 227
ApaI GGGCCC 2 cut(s) 398, 506
ApeKI GCWGC 6 cut(s) 752, 764, 787, 938, 950, 1082
ApoI RAATTY 3 cut(s) 464, 508, 1396
Asp700I GAANNNNTTC 1 cut(s) 557
AspLEI GCGC 1 cut(s) 329
AsuC2I CCSGG 7 cut(s) 258, 259, 398, 399, 404, 1312, 1313
AsuHPI GGTGA 4 cut(s) 73, 115, 286, 1192
AvaI CYCGRG 7 cut(s) 101, 131, 257, 377, 397, 733, 1311
AvaII GGWCC 4 cut(s) 97, 806, 1157, 1325
BaeGI GKGCMC 2 cut(s) 398, 506
BanI GGYRCC 1 cut(s) 173
BanII GRGCYC 4 cut(s) 108, 398, 419, 506
BauI CACGAG 2 cut(s) 1059, 1170
BbrPI CACGTG 1 cut(s) 1076
BbsI GAAGAC 1 cut(s) 60
Bbv12I GWGCWC 2 cut(s) 108, 635
BbvI GCAGC 6 cut(s) 751, 764, 774, 925, 962, 1069
BccI CCATC 1 cut(s) 454
BceAI ACGGC 1 cut(s) 592
BciT130I CCWGG 1 cut(s) 1007
BciVI GTATCC 1 cut(s) 1104
BcnI CCSGG 7 cut(s) 258, 259, 398, 399, 404, 1312, 1313
BcoDI GTCTC 3 cut(s) 193, 1245, 1303
BfaI CTAG 2 cut(s) 311, 1107
BfuAI ACCTGC 1 cut(s) 787
BfuI GTATCC 1 cut(s) 1104
BglI GCCNNNNNGGC 4 cut(s) 203, 251, 408, 647
BglII AGATCT 1 cut(s) 812
BmcAI AGTACT 1 cut(s) 837
Bme1390I CCNGG 8 cut(s) 258, 259, 398, 399, 404, 1007, 1312, 1313
Bme18I GGWCC 4 cut(s) 97, 806, 1157, 1325
BmeT110I CYCGRG 7 cut(s) 101, 131, 257, 377, 397, 733, 1311
BmiI GGNNCC 9 cut(s) 98, 175, 255, 396, 503, 504, 807, 1187, 1217
BmrFI CCNGG 8 cut(s) 258, 259, 398, 399, 404, 1007, 1312, 1313
BmsI GCATC 2 cut(s) 925, 1375
BpiI GAAGAC 1 cut(s) 60
BplI GAGNNNNNCTC 2 cut(s) 939, 971
BpmI CTGGAG 1 cut(s) 289
BpuEI CTTGAG 2 cut(s) 908, 1356
BpuMI CCSGG 7 cut(s) 258, 259, 398, 399, 404, 1312, 1313
BsaAI YACGTR 1 cut(s) 1076
BsaHI GRCGYC 2 cut(s) 195, 1278
BsaI GGTCTC 1 cut(s) 1303
BsaWI WCCGGW 2 cut(s) 227, 302
Bsc4I CCNNNNNNNGG 6 cut(s) 93, 94, 403, 404, 1154, 1387
Bse118I RCCGGY 2 cut(s) 170, 197
Bse1I ACTGG 2 cut(s) 696, 1237
BseAI TCCGGA 1 cut(s) 227
BseBI CCWGG 1 cut(s) 1007
BseGI GGATG 3 cut(s) 387, 940, 1366
BseLI CCNNNNNNNGG 6 cut(s) 93, 94, 403, 404, 1154, 1387
BseMII CTCAG 2 cut(s) 1020, 1077
BseNI ACTGG 2 cut(s) 696, 1237
BseRI GAGGAG 3 cut(s) 106, 169, 941
BseSI GKGCMC 2 cut(s) 398, 506
BseXI GCAGC 6 cut(s) 751, 764, 774, 925, 962, 1069
BseYI CCCAGC 3 cut(s) 93, 391, 1189
BsgI GTGCAG 1 cut(s) 771
Bsh1236I CGCG 4 cut(s) 110, 248, 329, 353
BshNI GGYRCC 1 cut(s) 173
BsiHKAI GWGCWC 2 cut(s) 108, 635
BsiHKCI CYCGRG 7 cut(s) 101, 131, 257, 377, 397, 733, 1311
BslFI GGGAC 3 cut(s) 110, 508, 819
BslI CCNNNNNNNGG 6 cut(s) 93, 94, 403, 404, 1154, 1387
BsmAI GTCTC 3 cut(s) 193, 1245, 1303
BsmFI GGGAC 3 cut(s) 110, 508, 819
BsmI GAATGC 1 cut(s) 687
Bso31I GGTCTC 1 cut(s) 1303
BsoBI CYCGRG 7 cut(s) 101, 131, 257, 377, 397, 733, 1311
Bsp120I GGGCCC 2 cut(s) 394, 502
Bsp1286I GDGCHC 5 cut(s) 108, 398, 419, 506, 635
Bsp13I TCCGGA 1 cut(s) 227
Bsp143I GATC 8 cut(s) 7, 39, 75, 111, 230, 545, 812, 964
Bsp19I CCATGG 1 cut(s) 88
Bsp68I TCGCGA 1 cut(s) 110
BspCNI CTCAG 2 cut(s) 1021, 1078
BspEI TCCGGA 1 cut(s) 227
BspFNI CGCG 4 cut(s) 110, 248, 329, 353
BspLI GGNNCC 9 cut(s) 98, 175, 255, 396, 503, 504, 807, 1187, 1217
BspMI ACCTGC 1 cut(s) 787
BspPI GGATC 3 cut(s) 2, 70, 238
BspQI GCTCTTC 1 cut(s) 987
BspT107I GGYRCC 1 cut(s) 173
BspTNI GGTCTC 1 cut(s) 1303
BsrFI RCCGGY 2 cut(s) 170, 197
BsrI ACTGG 2 cut(s) 696, 1237
BssAI RCCGGY 2 cut(s) 170, 197
BssMI GATC 8 cut(s) 7, 39, 75, 111, 230, 545, 812, 964
BssNI GRCGYC 2 cut(s) 195, 1278
BssSI CACGAG 2 cut(s) 1059, 1170
BssT1I CCWWGG 4 cut(s) 88, 642, 1128, 1135
Bst2BI CACGAG 2 cut(s) 1059, 1170
Bst2UI CCWGG 1 cut(s) 1007
Bst4CI ACNGT 4 cut(s) 187, 722, 1223, 1292
Bst6I CTCTTC 2 cut(s) 987, 1047
BstACI GRCGYC 2 cut(s) 195, 1278
BstBAI YACGTR 1 cut(s) 1076
BstC8I GCNNGC 5 cut(s) 108, 172, 199, 362, 1378
BstDEI CTNAG 2 cut(s) 1029, 1086
BstDSI CCRYGG 3 cut(s) 88, 246, 351
BstF5I GGATG 3 cut(s) 387, 940, 1366
BstFNI CGCG 4 cut(s) 110, 248, 329, 353
BstHHI GCGC 1 cut(s) 329
BstKTI GATC 8 cut(s) 10, 42, 78, 114, 233, 548, 815, 967
BstMAI GTCTC 3 cut(s) 193, 1245, 1303
BstMBI GATC 8 cut(s) 7, 39, 75, 111, 230, 545, 812, 964
BstNI CCWGG 1 cut(s) 1007
BstSCI CCNGG 8 cut(s) 256, 257, 396, 397, 402, 1005, 1310, 1311
BstSLI GKGCMC 2 cut(s) 398, 506
BstUI CGCG 4 cut(s) 110, 248, 329, 353
BstV1I GCAGC 6 cut(s) 751, 764, 774, 925, 962, 1069
BstV2I GAAGAC 1 cut(s) 60
BstX2I RGATCY 2 cut(s) 75, 812
BstYI RGATCY 2 cut(s) 75, 812
BsuI GTATCC 1 cut(s) 1104
BtgI CCRYGG 3 cut(s) 88, 246, 351
BtgZI GCGATG 1 cut(s) 473
BtsCI GGATG 3 cut(s) 387, 940, 1366
BtsIMutI CAGTG 1 cut(s) 703
BtuMI TCGCGA 1 cut(s) 110
BveI ACCTGC 1 cut(s) 787
Cac8I GCNNGC 5 cut(s) 108, 172, 199, 362, 1378
CfoI GCGC 1 cut(s) 329
Cfr10I RCCGGY 2 cut(s) 170, 197
Cfr42I CCGCGG 2 cut(s) 249, 354
Cfr9I CCCGGG 3 cut(s) 257, 397, 1311
CseI GACGC 2 cut(s) 58, 203
Csp6I GTAC 4 cut(s) 370, 577, 836, 1224
CviAII CATG 1 cut(s) 89
CviQI GTAC 4 cut(s) 370, 577, 836, 1224
DdeI CTNAG 2 cut(s) 1029, 1086
DpnI GATC 8 cut(s) 9, 41, 77, 113, 232, 547, 814, 966
DpnII GATC 8 cut(s) 7, 39, 75, 111, 230, 545, 812, 964
Eam1104I CTCTTC 2 cut(s) 987, 1047
EarI CTCTTC 2 cut(s) 987, 1047
EciI GGCGGA 1 cut(s) 138
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 4 cut(s) 88, 642, 1128, 1135
Eco147I AGGCCT 4 cut(s) 206, 641, 731, 1127
Eco24I GRGCYC 4 cut(s) 108, 398, 419, 506
Eco31I GGTCTC 1 cut(s) 1303
Eco47I GGWCC 4 cut(s) 97, 806, 1157, 1325
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 3 cut(s) 776, 840, 1044
Eco72I CACGTG 1 cut(s) 1076
Eco88I CYCGRG 7 cut(s) 101, 131, 257, 377, 397, 733, 1311
EcoICRI GAGCTC 1 cut(s) 106
EcoO109I RGGNCCY 3 cut(s) 97, 502, 1157
EcoRI GAATTC 2 cut(s) 464, 1396
EcoRII CCWGG 1 cut(s) 1005
EcoT14I CCWWGG 4 cut(s) 88, 642, 1128, 1135
EcoT38I GRGCYC 4 cut(s) 108, 398, 419, 506
ErhI CCWWGG 4 cut(s) 88, 642, 1128, 1135
FaeI CATG 1 cut(s) 92
FalI AAGNNNNNCTT 6 cut(s) 813, 845, 1325, 1357, 1365, 1397
FaqI GGGAC 3 cut(s) 110, 508, 819
FatI CATG 1 cut(s) 88
FauI CCCGC 1 cut(s) 346
FokI GGATG 3 cut(s) 394, 947, 1353
FriOI GRGCYC 4 cut(s) 108, 398, 419, 506
FspBI CTAG 2 cut(s) 311, 1107
GlaI GCGC 1 cut(s) 328
GsaI CCCAGC 3 cut(s) 97, 395, 1193
GsuI CTGGAG 1 cut(s) 289
HgaI GACGC 2 cut(s) 58, 203
HhaI GCGC 1 cut(s) 329
Hin1I GRCGYC 2 cut(s) 195, 1278
Hin1II CATG 1 cut(s) 92
Hin6I GCGC 1 cut(s) 327
HinP1I GCGC 1 cut(s) 327
HincII GTYRAC 1 cut(s) 1258
HindII GTYRAC 1 cut(s) 1258
HinfI GANTC 5 cut(s) 56, 160, 625, 705, 1259
HphI GGTGA 4 cut(s) 73, 115, 286, 1192
Hpy166II GTNNAC 2 cut(s) 577, 1258
Hpy188I TCNGA 6 cut(s) 12, 61, 193, 240, 637, 984
Hpy8I GTNNAC 2 cut(s) 577, 1258
Hpy99I CGWCG 4 cut(s) 74, 454, 613, 1283
HpyAV CCTTC 6 cut(s) 130, 515, 721, 1117, 1206, 1327
HpyCH4III ACNGT 4 cut(s) 187, 722, 1223, 1292
HpyCH4IV ACGT 4 cut(s) 916, 1075, 1114, 1278
HpyCH4V TGCA 4 cut(s) 541, 583, 752, 1366
HpyF3I CTNAG 2 cut(s) 1029, 1086
HpySE526I ACGT 4 cut(s) 916, 1075, 1114, 1278
Hsp92I GRCGYC 2 cut(s) 195, 1278
Hsp92II CATG 1 cut(s) 92
HspAI GCGC 1 cut(s) 327
Kpn2I TCCGGA 1 cut(s) 227
KroI GCCGGC 2 cut(s) 170, 197
KroNI GCCGGC 2 cut(s) 172, 199
KspI CCGCGG 2 cut(s) 249, 354
Kzo9I GATC 8 cut(s) 7, 39, 75, 111, 230, 545, 812, 964
LguI GCTCTTC 1 cut(s) 987
LmnI GCTCC 5 cut(s) 259, 638, 684, 928, 1390
Lsp1109I GCAGC 6 cut(s) 751, 764, 774, 925, 962, 1069
LweI GCATC 2 cut(s) 925, 1375
MaeI CTAG 2 cut(s) 311, 1107
MaeII ACGT 4 cut(s) 916, 1075, 1114, 1278
MaeIII GTNAC 2 cut(s) 716, 1165
MalI GATC 8 cut(s) 9, 41, 77, 113, 232, 547, 814, 966
MboI GATC 8 cut(s) 7, 39, 75, 111, 230, 545, 812, 964
MboII GAAGA 7 cut(s) 65, 833, 866, 908, 1004, 1061, 1064
MflI RGATCY 2 cut(s) 75, 812
MhlI GDGCHC 5 cut(s) 108, 398, 419, 506, 635
MluCI AATT 3 cut(s) 464, 508, 1396
MlyI GAGTC 3 cut(s) 50, 619, 1253
MreI CGCCGGCG 1 cut(s) 197
MroI TCCGGA 1 cut(s) 227
MroNI GCCGGC 2 cut(s) 170, 197
MroXI GAANNNNTTC 1 cut(s) 557
MseI TTAA 2 cut(s) 920, 1343
MspA1I CMGCKG 3 cut(s) 248, 353, 755
MspR9I CCNGG 8 cut(s) 258, 259, 398, 399, 404, 1007, 1312, 1313
Mva1269I GAATGC 1 cut(s) 687
MvaI CCWGG 1 cut(s) 1007
MvnI CGCG 4 cut(s) 110, 248, 329, 353
NaeI GCCGGC 2 cut(s) 172, 199
NciI CCSGG 7 cut(s) 258, 259, 398, 399, 404, 1312, 1313
NcoI CCATGG 1 cut(s) 88
NdeII GATC 8 cut(s) 7, 39, 75, 111, 230, 545, 812, 964
NgoMIV GCCGGC 2 cut(s) 170, 197
NlaIII CATG 1 cut(s) 92
NlaIV GGNNCC 9 cut(s) 98, 175, 255, 396, 503, 504, 807, 1187, 1217
NmeAIII GCCGAG 1 cut(s) 398
NruI TCGCGA 1 cut(s) 110
PaeR7I CTCGAG 2 cut(s) 101, 733
PceI AGGCCT 4 cut(s) 206, 641, 731, 1127
PciSI GCTCTTC 1 cut(s) 987
PcsI WCGNNNNNNNCGW 3 cut(s) 446, 503, 554
PctI GAATGC 1 cut(s) 687
PdiI GCCGGC 2 cut(s) 172, 199
PdmI GAANNNNTTC 1 cut(s) 557
PfeI GAWTC 2 cut(s) 160, 705
PleI GAGTC 3 cut(s) 50, 619, 1253
PmaCI CACGTG 1 cut(s) 1076
PmlI CACGTG 1 cut(s) 1076
PpsI GAGTC 3 cut(s) 50, 619, 1253
Ppu21I YACGTR 1 cut(s) 1076
PpuMI RGGWCCY 2 cut(s) 97, 1157
Psp124BI GAGCTC 1 cut(s) 108
Psp5II RGGWCCY 2 cut(s) 97, 1157
Psp6I CCWGG 1 cut(s) 1005
PspCI CACGTG 1 cut(s) 1076
PspFI CCCAGC 3 cut(s) 93, 391, 1189
PspGI CCWGG 1 cut(s) 1005
PspN4I GGNNCC 9 cut(s) 98, 175, 255, 396, 503, 504, 807, 1187, 1217
PspOMI GGGCCC 2 cut(s) 394, 502
PspPPI RGGWCCY 2 cut(s) 97, 1157
PspXI VCTCGAGB 2 cut(s) 101, 733
PsuI RGATCY 2 cut(s) 75, 812
PvuII CAGCTG 1 cut(s) 755
RruI TCGCGA 1 cut(s) 110
RsaI GTAC 4 cut(s) 371, 578, 837, 1225
RsaNI GTAC 4 cut(s) 370, 577, 836, 1224
SacI GAGCTC 1 cut(s) 108
SacII CCGCGG 2 cut(s) 249, 354
SapI GCTCTTC 1 cut(s) 987
SaqAI TTAA 2 cut(s) 920, 1343
Sau3AI GATC 8 cut(s) 7, 39, 75, 111, 230, 545, 812, 964
ScaI AGTACT 1 cut(s) 837
SchI GAGTC 3 cut(s) 50, 619, 1253
ScrFI CCNGG 8 cut(s) 258, 259, 398, 399, 404, 1007, 1312, 1313
SduI GDGCHC 5 cut(s) 108, 398, 419, 506, 635
SfaNI GCATC 2 cut(s) 925, 1375
Sfr274I CTCGAG 2 cut(s) 101, 733
Sfr303I CCGCGG 2 cut(s) 249, 354
SgrAI CRCCGGYG 1 cut(s) 197
SgrBI CCGCGG 2 cut(s) 249, 354
SinI GGWCC 4 cut(s) 97, 806, 1157, 1325
SlaI CTCGAG 2 cut(s) 101, 733
SmaI CCCGGG 3 cut(s) 259, 399, 1313
SmlI CTYRAG 4 cut(s) 101, 733, 887, 1371
SmoI CTYRAG 4 cut(s) 101, 733, 887, 1371
SrfI GCCCGGGC 1 cut(s) 399
Sse9I AATT 3 cut(s) 464, 508, 1396
SseBI AGGCCT 4 cut(s) 206, 641, 731, 1127
SspMI CTAG 2 cut(s) 311, 1107
SstI GAGCTC 1 cut(s) 108
StuI AGGCCT 4 cut(s) 206, 641, 731, 1127
StyD4I CCNGG 8 cut(s) 256, 257, 396, 397, 402, 1005, 1310, 1311
StyI CCWWGG 4 cut(s) 88, 642, 1128, 1135
TaaI ACNGT 4 cut(s) 187, 722, 1223, 1292
TaiI ACGT 4 cut(s) 919, 1078, 1117, 1281
TaqI TCGA 8 cut(s) 72, 102, 480, 548, 734, 957, 967, 1281
TaqII GACCGA 1 cut(s) 283
TasI AATT 3 cut(s) 464, 508, 1396
TatI WGTACW 2 cut(s) 576, 835
TauI GCSGC 5 cut(s) 154, 170, 248, 353, 650
TfiI GAWTC 2 cut(s) 160, 705
Tru1I TTAA 2 cut(s) 920, 1343
Tru9I TTAA 2 cut(s) 920, 1343
TscAI CASTG 1 cut(s) 703
TseI GCWGC 6 cut(s) 752, 764, 787, 938, 950, 1082
TspGWI ACGGA 1 cut(s) 467
TspMI CCCGGG 3 cut(s) 257, 397, 1311
TspRI CASTG 1 cut(s) 703
VpaK11BI GGWCC 4 cut(s) 97, 806, 1157, 1325
XapI RAATTY 3 cut(s) 464, 508, 1396
XcmI CCANNNNNNNNNTGG 1 cut(s) 1384
XhoI CTCGAG 2 cut(s) 101, 733
XmaI CCCGGG 3 cut(s) 257, 397, 1311
XmnI GAANNNNTTC 1 cut(s) 557
XspI CTAG 2 cut(s) 311, 1107
ZraI GACGTC 1 cut(s) 1279
ZrmI AGTACT 1 cut(s) 837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.