FvH4_5g12660

Histone deacetylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0010430
Physical Location & Seq
Forward (+)
7136981 .. 7144717
7737 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g12660.t2

Sequence Viewer

Length: 1716 bp
ATGATTGTGGCTGAAAATCCCAATGCAAGTACTGAACAGAACTTAGTATCGGAAACTCTTCAAATGACTCGTTTAGCTAATGGGGAGGCGGAGGTAAGTCGTCACAAATCGAACAATGAAGTCTCCGGCAAAGATGCATCAACAGATGATGTAAATGGGATCACGCCGCCTGAGGTTTCTAGTAAAAAGGCAGGACAGCAAAAAGAAATGACTTTCCAAGATGTGTACAACCAAGACCTCGATGATGAGGAGGATGACAGTGATTGGGAGCCCCTGCAAAGGAGTGCTGAACTTGTGAAGTGGTTCTGCACCAACTGCACAATGGTCAACCTTGGTGATGATGTCAATTGCGATATATGTGGGGAACATAGAGAGTCTGGAATTCTTAGGCATGGTTTTTTGGCATCTCCCCTGTTACCAGATTCAGGCTTGACTGAGATTGATTCTGATATTAGAGAAAGACATAAAGGGTCACGAGATTCAGCCTCAAACAGTTCCACTGCTGTGGGTTTTGATGAGAGAATGTTGCTACATTCAGAAATTCAAATGCAGTCACATCCACACCCAGAAAGACCGGATCGTATTCGAGCTATTGCTGCTAGCCTTGCTACAGCTGGTATATTTCCAGGACGATGTTACCCAATTCCTGCTAGAGAAATTACGCGTGAAGAACTGCAGATGGTCCATTCCTTAGAGCATGTTGAAGCTGTTGATCTTACAGGCCATATGTTCTCCAGTTATTTCACTCCTGACACATATGCCAATGAACATTCAGCATGCGCTGCTAGGCTTGCAGCAGGTTTATGTGCTGATCTTGCTTCAGCGATTGTTTCTGGACGTACCAAGAATGGTTTTGCTTTGGTTCGACCTCCTGGTCATCATGCTGGTATAAAGCAGGCAATGGGGTTTTGCCTCCACAATAATGCAGCAGTTGCTGCATTAGCAGCTCAAGTTTCTGGGGCTAAAAAAGTTCTGATTGTTGATTGGGATGTTCATCATGGGAACGGCACCCAAGAAATATTTGACCAGAACAAATCGGTCTTGTATATATCTTTGCATAGACATGAGGGGGGGAAGTTCTATCCTGGTACTGGAGCTGCTGATGAGGTTGGTACTATGGGAGCTGAAGGATACTGTGTGAATGTTCCATGGAGTCGTGGTGGAGTGGGTGATAATGATTATATTTTCGCATTTCAGAATGTTGTGCTTCCTATAGCTTCTGCATTTGCTCCTGACATCACCATCATATCAGCAGGATTTGATGCAGCAAGGGGTGATCCTCTAGGATGTTGTGATGTTACTCCTGCTGGCTATGCAAAGATGACTGACATGTTGACTGATTTGTCTGGAGGGAAGTTGTTGGTCATTCTTGAGGGCGGGTATAATCTACGGTCAATATCATCTTCTGCTACTTCAGTAATTAAGGTATTACTGGGTGAAAGTCCAGGATGTGAATTCGACAATGCTTCACCTTCCAGATCTGGACTGCAAACTGTTCTAGAGGTCCTTAAAATTCAAAGCAAGTACTGGCCTGTTTTGGCGTCCAACTTTACAAAATTGCAGTCACAAGAGAGAATGCACTCTATTGAAAACAAAAGGAAACAAATAGAAAAGAAACGGCGGGCTGTGGCTCCAATGTGGTGGAAATGGGGACGGAAAGGTCTACTGTATCATTTTCTAAATCGCCATGTCCAAATGAAGCGAAAGGGTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05034 ko05165 ko05203 map05034 map05165 map05203
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

572

Amino Acids

62.39

Weight (kDa)

5.84

Isoelectric Point (pI)

43.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 188 - 462 1e-86 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 873, 1342, 1659
Acc36I ACCTGC 1 cut(s) 788
AccB1I GGYRCC 1 cut(s) 1007
AccI GTMKAC 1 cut(s) 1663
AccII CGCG 1 cut(s) 664
AciI CCGC 4 cut(s) 89, 167, 1377, 1621
AclWI GGATC 3 cut(s) 167, 585, 1271
AcsI RAATTY 4 cut(s) 381, 540, 1454, 1512
AcuI CTGAAG 3 cut(s) 804, 1146, 1398
AcyI GRCGYC 1 cut(s) 1541
AfaI GTAC 6 cut(s) 31, 227, 841, 1090, 1114, 1526
AfiI CCNNNNNNNGG 3 cut(s) 279, 425, 1091
AflIII ACRYGT 2 cut(s) 662, 1329
AgsI TTSAA 5 cut(s) 62, 545, 704, 1517, 1589
AjnI CCWGG 4 cut(s) 625, 871, 1084, 1444
AleI CACNNNNGTG 1 cut(s) 503
AluBI AGCT 8 cut(s) 77, 590, 614, 707, 947, 1097, 1124, 1217
AluI AGCT 8 cut(s) 77, 590, 614, 707, 947, 1097, 1124, 1217
Alw26I GTCTC 1 cut(s) 127
AlwI GGATC 3 cut(s) 167, 585, 1271
AlwNI CAGNNNCTG 1 cut(s) 935
AoxI GGCC 2 cut(s) 721, 1529
ApeKI GCWGC 8 cut(s) 596, 782, 794, 926, 935, 944, 1097, 1265
ApoI RAATTY 4 cut(s) 381, 540, 1454, 1512
ArsI GACNNNNNNTTYG 2 cut(s) 1547, 1579
Asp700I GAANNNNTTC 2 cut(s) 57, 302
AspLEI GCGC 1 cut(s) 782
AspS9I GGNCC 2 cut(s) 682, 1504
AsuHPI GGTGA 6 cut(s) 347, 1181, 1231, 1286, 1448, 1461
AsuNHI GCTAGC 1 cut(s) 599
AvaII GGWCC 2 cut(s) 682, 1504
AxyI CCTNAGG 1 cut(s) 171
BanI GGYRCC 1 cut(s) 1007
BanII GRGCYC 1 cut(s) 273
BauI CACGAG 1 cut(s) 474
BbvI GCAGC 8 cut(s) 583, 769, 806, 922, 938, 956, 1084, 1277
BccI CCATC 2 cut(s) 673, 1250
BceAI ACGGC 2 cut(s) 1021, 1634
BciT130I CCWGG 4 cut(s) 627, 873, 1086, 1446
BciVI GTATCC 1 cut(s) 1124
BcoDI GTCTC 1 cut(s) 127
BfaI CTAG 6 cut(s) 180, 600, 651, 786, 1283, 1499
BfmI CTRYAG 3 cut(s) 609, 674, 1212
BfuAI ACCTGC 1 cut(s) 788
BfuI GTATCC 1 cut(s) 1124
BglII AGATCT 1 cut(s) 1478
BisI GCNGC 9 cut(s) 167, 597, 783, 795, 927, 936, 945, 1098, 1266
BlsI GCNGC 9 cut(s) 168, 598, 784, 796, 928, 937, 946, 1099, 1267
BmcAI AGTACT 2 cut(s) 31, 1526
Bme1390I CCNGG 4 cut(s) 627, 873, 1086, 1446
Bme18I GGWCC 2 cut(s) 682, 1504
BmgT120I GGNCC 2 cut(s) 682, 1504
BmiI GGNNCC 3 cut(s) 270, 1009, 1632
BmrFI CCNGG 4 cut(s) 627, 873, 1086, 1446
BmrI ACTGGG 1 cut(s) 1442
BmsI GCATC 4 cut(s) 124, 146, 413, 1252
BmtI GCTAGC 1 cut(s) 603
BmuI ACTGGG 1 cut(s) 1442
BpmI CTGGAG 3 cut(s) 718, 1113, 1368
BpuEI CTTGAG 2 cut(s) 933, 1391
BsaBI GATNNNNATC 1 cut(s) 993
BsaHI GRCGYC 1 cut(s) 1541
BsaJI CCNNGG 2 cut(s) 331, 1148
BsaWI WCCGGW 1 cut(s) 574
BsaXI ACNNNNNCTCC 2 cut(s) 1144, 1174
Bsc4I CCNNNNNNNGG 3 cut(s) 279, 425, 1091
Bse1I ACTGG 4 cut(s) 735, 1096, 1437, 1532
Bse21I CCTNAGG 1 cut(s) 171
Bse3DI GCAATG 1 cut(s) 906
Bse8I GATNNNNATC 1 cut(s) 993
BseBI CCWGG 4 cut(s) 627, 873, 1086, 1446
BseDI CCNNGG 2 cut(s) 331, 1148
BseGI GGATG 5 cut(s) 259, 556, 994, 1292, 1454
BseJI GATNNNNATC 1 cut(s) 993
BseLI CCNNNNNNNGG 3 cut(s) 279, 425, 1091
BseMI GCAATG 1 cut(s) 906
BseMII CTCAG 2 cut(s) 162, 426
BseNI ACTGG 4 cut(s) 735, 1096, 1437, 1532
BseRI GAGGAG 1 cut(s) 263
BseXI GCAGC 8 cut(s) 583, 769, 806, 922, 938, 956, 1084, 1277
BsgI GTGCAG 2 cut(s) 292, 301
Bsh1236I CGCG 1 cut(s) 664
BshFI GGCC 2 cut(s) 723, 1531
BshNI GGYRCC 1 cut(s) 1007
BsiSI CCGG 2 cut(s) 126, 575
BslFI GGGAC 1 cut(s) 1665
BslI CCNNNNNNNGG 3 cut(s) 279, 425, 1091
BsmAI GTCTC 1 cut(s) 127
BsmFI GGGAC 1 cut(s) 1665
BsmI GAATGC 1 cut(s) 1581
BsnI GGCC 2 cut(s) 723, 1531
Bsp1286I GDGCHC 1 cut(s) 273
Bsp1407I TGTACA 1 cut(s) 225
Bsp143I GATC 6 cut(s) 159, 577, 712, 811, 1276, 1478
Bsp19I CCATGG 1 cut(s) 1148
BspACI CCGC 4 cut(s) 89, 167, 1377, 1621
BspANI GGCC 2 cut(s) 723, 1531
BspCNI CTCAG 2 cut(s) 163, 427
BspFNI CGCG 1 cut(s) 664
BspLI GGNNCC 3 cut(s) 270, 1009, 1632
BspMAI CTGCAG 1 cut(s) 678
BspMI ACCTGC 1 cut(s) 788
BspOI GCTAGC 1 cut(s) 603
BspPI GGATC 3 cut(s) 167, 585, 1271
BspT107I GGYRCC 1 cut(s) 1007
BsrDI GCAATG 1 cut(s) 906
BsrGI TGTACA 1 cut(s) 225
BsrI ACTGG 4 cut(s) 735, 1096, 1437, 1532
BssECI CCNNGG 2 cut(s) 331, 1148
BssMI GATC 6 cut(s) 159, 577, 712, 811, 1276, 1478
BssNI GRCGYC 1 cut(s) 1541
BssSI CACGAG 1 cut(s) 474
BssT1I CCWWGG 2 cut(s) 331, 1148
Bst2BI CACGAG 1 cut(s) 474
Bst2UI CCWGG 4 cut(s) 627, 873, 1086, 1446
Bst4CI ACNGT 6 cut(s) 260, 494, 1136, 1392, 1495, 1668
Bst6I CTCTTC 1 cut(s) 63
BstACI GRCGYC 1 cut(s) 1541
BstAPI GCANNNNNTGC 4 cut(s) 315, 782, 932, 935
BstAUI TGTACA 1 cut(s) 225
BstC8I GCNNGC 6 cut(s) 601, 778, 792, 897, 1309, 1623
BstDEI CTNAG 5 cut(s) 43, 171, 386, 435, 691
BstDSI CCRYGG 1 cut(s) 1148
BstF5I GGATG 5 cut(s) 259, 556, 994, 1292, 1454
BstFNI CGCG 1 cut(s) 664
BstHHI GCGC 1 cut(s) 782
BstKTI GATC 6 cut(s) 162, 580, 715, 814, 1279, 1481
BstMAI GTCTC 1 cut(s) 127
BstMBI GATC 6 cut(s) 159, 577, 712, 811, 1276, 1478
BstNI CCWGG 4 cut(s) 627, 873, 1086, 1446
BstNSI RCATGY 3 cut(s) 701, 780, 1333
BstSCI CCNGG 4 cut(s) 625, 871, 1084, 1444
BstSFI CTRYAG 3 cut(s) 609, 674, 1212
BstUI CGCG 1 cut(s) 664
BstV1I GCAGC 8 cut(s) 583, 769, 806, 922, 938, 956, 1084, 1277
BstX2I RGATCY 1 cut(s) 1478
BstXI CCANNNNNNTGG 2 cut(s) 505, 1641
BstYI RGATCY 1 cut(s) 1478
Bsu36I CCTNAGG 1 cut(s) 171
BsuI GTATCC 1 cut(s) 1124
BsuRI GGCC 2 cut(s) 723, 1531
BtgI CCRYGG 1 cut(s) 1148
BtsCI GGATG 5 cut(s) 259, 556, 994, 1292, 1454
BtsI GCAGTG 1 cut(s) 498
BtsIMutI CAGTG 2 cut(s) 265, 498
BveI ACCTGC 1 cut(s) 788
Cac8I GCNNGC 6 cut(s) 601, 778, 792, 897, 1309, 1623
CaiI CAGNNNCTG 1 cut(s) 935
CfoI GCGC 1 cut(s) 782
Cfr13I GGNCC 2 cut(s) 682, 1504
CseI GACGC 1 cut(s) 1530
Csp6I GTAC 6 cut(s) 30, 226, 840, 1089, 1113, 1525
CviAII CATG 9 cut(s) 392, 698, 777, 881, 998, 1064, 1149, 1330, 1688
CviQI GTAC 6 cut(s) 30, 226, 840, 1089, 1113, 1525
DdeI CTNAG 5 cut(s) 43, 171, 386, 435, 691
DpnI GATC 6 cut(s) 161, 579, 714, 813, 1278, 1480
DpnII GATC 6 cut(s) 159, 577, 712, 811, 1276, 1478
DrdI GACNNNNNNGTC 3 cut(s) 873, 1342, 1659
DseDI GACNNNNNNGTC 3 cut(s) 873, 1342, 1659
Eam1104I CTCTTC 1 cut(s) 63
EarI CTCTTC 1 cut(s) 63
EciI GGCGGA 1 cut(s) 104
Eco130I CCWWGG 2 cut(s) 331, 1148
Eco24I GRGCYC 1 cut(s) 273
Eco47I GGWCC 2 cut(s) 682, 1504
Eco57I CTGAAG 3 cut(s) 804, 1146, 1398
Eco81I CCTNAGG 1 cut(s) 171
EcoO109I RGGNCCY 1 cut(s) 1504
EcoRI GAATTC 2 cut(s) 381, 1454
EcoRII CCWGG 4 cut(s) 625, 871, 1084, 1444
EcoT14I CCWWGG 2 cut(s) 331, 1148
EcoT22I ATGCAT 1 cut(s) 139
EcoT38I GRGCYC 1 cut(s) 273
ErhI CCWWGG 2 cut(s) 331, 1148
FaeI CATG 9 cut(s) 395, 701, 780, 884, 1001, 1067, 1152, 1333, 1691
FaqI GGGAC 1 cut(s) 1665
FatI CATG 9 cut(s) 391, 697, 776, 880, 997, 1063, 1148, 1329, 1687
FauI CCCGC 2 cut(s) 1370, 1614
FauNDI CATATG 2 cut(s) 726, 757
FblI GTMKAC 1 cut(s) 1663
Fnu4HI GCNGC 9 cut(s) 167, 597, 783, 795, 927, 936, 945, 1098, 1266
FokI GGATG 5 cut(s) 266, 543, 1001, 1299, 1461
FriOI GRGCYC 1 cut(s) 273
Fsp4HI GCNGC 9 cut(s) 167, 597, 783, 795, 927, 936, 945, 1098, 1266
FspBI CTAG 6 cut(s) 180, 600, 651, 786, 1283, 1499
GlaI GCGC 1 cut(s) 781
GluI GCNGC 9 cut(s) 167, 597, 783, 795, 927, 936, 945, 1098, 1266
GsuI CTGGAG 3 cut(s) 718, 1113, 1368
HaeIII GGCC 2 cut(s) 723, 1531
HapII CCGG 2 cut(s) 126, 575
HgaI GACGC 1 cut(s) 1530
HhaI GCGC 1 cut(s) 782
Hin1I GRCGYC 1 cut(s) 1541
Hin1II CATG 9 cut(s) 395, 701, 780, 884, 1001, 1067, 1152, 1333, 1691
Hin6I GCGC 1 cut(s) 780
HinP1I GCGC 1 cut(s) 780
HincII GTYRAC 2 cut(s) 328, 1335
HindII GTYRAC 2 cut(s) 328, 1335
HinfI GANTC 6 cut(s) 67, 374, 422, 443, 479, 1153
HpaII CCGG 2 cut(s) 126, 575
HphI GGTGA 6 cut(s) 347, 1181, 1231, 1286, 1448, 1461
Hpy166II GTNNAC 4 cut(s) 226, 328, 1335, 1664
Hpy188I TCNGA 5 cut(s) 52, 448, 538, 975, 1197
Hpy8I GTNNAC 4 cut(s) 226, 328, 1335, 1664
HpyAV CCTTC 2 cut(s) 1121, 1482
HpyCH4III ACNGT 6 cut(s) 260, 494, 1136, 1392, 1495, 1668
HpyCH4IV ACGT 1 cut(s) 838
HpyF3I CTNAG 5 cut(s) 43, 171, 386, 435, 691
HpySE526I ACGT 1 cut(s) 838
Hsp92I GRCGYC 1 cut(s) 1541
Hsp92II CATG 9 cut(s) 395, 701, 780, 884, 1001, 1067, 1152, 1333, 1691
HspAI GCGC 1 cut(s) 780
Kzo9I GATC 6 cut(s) 159, 577, 712, 811, 1276, 1478
LmnI GCTCC 5 cut(s) 268, 1094, 1121, 1234, 1636
Lsp1109I GCAGC 8 cut(s) 583, 769, 806, 922, 938, 956, 1084, 1277
LweI GCATC 4 cut(s) 124, 146, 413, 1252
MaeI CTAG 6 cut(s) 180, 600, 651, 786, 1283, 1499
MaeII ACGT 1 cut(s) 838
MaeIII GTNAC 7 cut(s) 101, 414, 471, 552, 635, 1297, 1563
MalI GATC 6 cut(s) 161, 579, 714, 813, 1278, 1480
MboI GATC 6 cut(s) 159, 577, 712, 811, 1276, 1478
MboII GAAGA 3 cut(s) 50, 680, 1395
MfeI CAATTG 1 cut(s) 346
MflI RGATCY 1 cut(s) 1478
MhlI GDGCHC 1 cut(s) 273
MluCI AATT 9 cut(s) 346, 381, 540, 642, 657, 1419, 1454, 1512, 1556
MluI ACGCGT 1 cut(s) 662
MlyI GAGTC 3 cut(s) 61, 383, 1162
MmeI TCCRAC 1 cut(s) 1569
Mph1103I ATGCAT 1 cut(s) 139
MroXI GAANNNNTTC 2 cut(s) 57, 302
MseI TTAA 2 cut(s) 1422, 1509
MslI CAYNNNNRTG 3 cut(s) 503, 921, 1062
MspA1I CMGCKG 1 cut(s) 614
MspI CCGG 2 cut(s) 126, 575
MspR9I CCNGG 4 cut(s) 627, 873, 1086, 1446
MunI CAATTG 1 cut(s) 346
Mva1269I GAATGC 1 cut(s) 1581
MvaI CCWGG 4 cut(s) 627, 873, 1086, 1446
MvnI CGCG 1 cut(s) 664
NcoI CCATGG 1 cut(s) 1148
NdeI CATATG 2 cut(s) 726, 757
NdeII GATC 6 cut(s) 159, 577, 712, 811, 1276, 1478
NheI GCTAGC 1 cut(s) 599
NlaIII CATG 9 cut(s) 395, 701, 780, 884, 1001, 1067, 1152, 1333, 1691
NlaIV GGNNCC 3 cut(s) 270, 1009, 1632
NmuCI GTSAC 4 cut(s) 101, 471, 552, 1563
NsiI ATGCAT 1 cut(s) 139
NspI RCATGY 3 cut(s) 701, 780, 1333
OliI CACNNNNGTG 1 cut(s) 503
PaeI GCATGC 1 cut(s) 780
PciI ACATGT 1 cut(s) 1329
PctI GAATGC 1 cut(s) 1581
PdmI GAANNNNTTC 2 cut(s) 57, 302
PfeI GAWTC 3 cut(s) 422, 443, 479
PfoI TCCNGGA 2 cut(s) 625, 1444
PkrI GCNGC 9 cut(s) 168, 598, 784, 796, 928, 937, 946, 1099, 1267
PleI GAGTC 3 cut(s) 61, 382, 1161
PpsI GAGTC 3 cut(s) 61, 382, 1161
PpuMI RGGWCCY 1 cut(s) 1504
PscI ACATGT 1 cut(s) 1329
Psp5II RGGWCCY 1 cut(s) 1504
Psp6I CCWGG 4 cut(s) 625, 871, 1084, 1444
PspGI CCWGG 4 cut(s) 625, 871, 1084, 1444
PspN4I GGNNCC 3 cut(s) 270, 1009, 1632
PspPI GGNCC 2 cut(s) 682, 1504
PspPPI RGGWCCY 1 cut(s) 1504
PstI CTGCAG 1 cut(s) 678
PstNI CAGNNNCTG 1 cut(s) 935
PsuI RGATCY 1 cut(s) 1478
PvuII CAGCTG 1 cut(s) 614
RsaI GTAC 6 cut(s) 31, 227, 841, 1090, 1114, 1526
RsaNI GTAC 6 cut(s) 30, 226, 840, 1089, 1113, 1525
RseI CAYNNNNRTG 3 cut(s) 503, 921, 1062
SaqAI TTAA 2 cut(s) 1422, 1509
SatI GCNGC 9 cut(s) 167, 597, 783, 795, 927, 936, 945, 1098, 1266
Sau3AI GATC 6 cut(s) 159, 577, 712, 811, 1276, 1478
Sau96I GGNCC 2 cut(s) 682, 1504
ScaI AGTACT 2 cut(s) 31, 1526
SchI GAGTC 3 cut(s) 61, 383, 1162
ScrFI CCNGG 4 cut(s) 627, 873, 1086, 1446
SduI GDGCHC 1 cut(s) 273
SfaNI GCATC 4 cut(s) 124, 146, 413, 1252
SfcI CTRYAG 3 cut(s) 609, 674, 1212
SinI GGWCC 2 cut(s) 682, 1504
SmiMI CAYNNNNRTG 3 cut(s) 503, 921, 1062
SmlI CTYRAG 2 cut(s) 948, 1370
SmoI CTYRAG 2 cut(s) 948, 1370
SphI GCATGC 1 cut(s) 780
Sse9I AATT 9 cut(s) 346, 381, 540, 642, 657, 1419, 1454, 1512, 1556
SsiI CCGC 4 cut(s) 89, 167, 1377, 1621
SspI AATATT 1 cut(s) 1020
SspMI CTAG 6 cut(s) 180, 600, 651, 786, 1283, 1499
StyD4I CCNGG 4 cut(s) 625, 871, 1084, 1444
StyI CCWWGG 2 cut(s) 331, 1148
TaaI ACNGT 6 cut(s) 260, 494, 1136, 1392, 1495, 1668
TaiI ACGT 1 cut(s) 841
TaqI TCGA 5 cut(s) 110, 240, 586, 865, 1458
TaqII GACCGA 1 cut(s) 1027
TasI AATT 9 cut(s) 346, 381, 540, 642, 657, 1419, 1454, 1512, 1556
TatI WGTACW 3 cut(s) 29, 225, 1524
TauI GCSGC 1 cut(s) 169
TfiI GAWTC 3 cut(s) 422, 443, 479
Tru1I TTAA 2 cut(s) 1422, 1509
Tru9I TTAA 2 cut(s) 1422, 1509
TscAI CASTG 2 cut(s) 265, 505
TseFI GTSAC 4 cut(s) 101, 471, 552, 1563
TseI GCWGC 8 cut(s) 596, 782, 794, 926, 935, 944, 1097, 1265
Tsp45I GTSAC 4 cut(s) 101, 471, 552, 1563
TspDTI ATGAA 4 cut(s) 132, 780, 983, 1712
TspGWI ACGGA 1 cut(s) 1669
TspRI CASTG 2 cut(s) 265, 505
VpaK11BI GGWCC 2 cut(s) 682, 1504
XapI RAATTY 4 cut(s) 381, 540, 1454, 1512
XbaI TCTAGA 1 cut(s) 1498
XceI RCATGY 3 cut(s) 701, 780, 1333
XcmI CCANNNNNNNNNTGG 1 cut(s) 319
XmiI GTMKAC 1 cut(s) 1663
XmnI GAANNNNTTC 2 cut(s) 57, 302
XspI CTAG 6 cut(s) 180, 600, 651, 786, 1283, 1499
ZrmI AGTACT 2 cut(s) 31, 1526
Zsp2I ATGCAT 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.