MD14G1222300.v1.1

Histone deacetylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0010430
Physical Location & Seq
Reverse (-)
30389133 .. 30394179
5047 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1222300.v1.1.491

Sequence Viewer

Length: 1722 bp
ATGGGTCGTTTAGCAAATGGGGCGGCCGAGAAAAGTCTTCACAAACCAAACAACCAAGCTCAATGTCAAGGCTCTAATGGGAGATGTGGAAGCTCGGGCTCTCACGGAACGAAATCTAGACCGTGTCGTGAGGAAAATTGTGGGGAAGGAGATGTAGGAGTATCTGGAAAAGATGCACCAACTGATGTTTTAAGTAAAAAGGCAGCAGAGCAAATGGAAATGACATTAGAAGACATGTACAACCAAGACCTCGATGACGAGGATGATGATAGCGATTGGGATCCCTTCCAACAGCATGTAGAAGTAATGAAATGGTTCTGCACCAACTGTACAATGCCCAATCTTGGTGATATTGATCATTGTGATGTATGTCGAGAACATAGAGAATCTGGTATCTTGAGGCAGGGGTGTTTCGCATCTGCCTTTGATTCAAGCCCCACTGAGACTATGTCTGACACTAGAGAAAGACACAAAGGCTCCCAAGATTCAGCGTCAAAGAGTTCCACTGCTGTAGGTTTCGATGAGAGAATGTTGCTACATTCAGAAGTTCAAATGAACTCACATCCGCACCCAGAAAGACCAGATCGTATTCGAGCCATTGCTGCTAGCCTTGCTACAGCTGGTATATTTCCAGGAAGGTGCCATCCAATTCCTGCTAGAGAAATCACTCGCGAAGAACTTCAGATGGTCCATTCTTTGGAGCATATTGAATCAGTTGACCATACAGGCCATATGTTTTCAAGTTATTTCACCCCTGACACATATGCCAATGAACATTCAGCACGTGCTGCTAGACTTGCAGCAGGTTTATGTGCTGATCTTGCTAAAGCAATTGTTTCTGGACGTGCCAAAAATGGTTTTGCCCTTGTTAGGCCTCCTGGTCATCATGCTGGTGTAAGACAGGCTATGGGGTTTTGCCTCCACAATAATGCAGCAGTTGCTGCATTAGCAGGTCAGGTTTCTGGTGCTAAGAAAGTGCTAATCGTTGATTGGGATGTTCATCACGGGAATGGCACACAAGAAATATTTGATCAGAACAAATCGGTCTTGTATATATCCTTACATAGACATGAAGGAGGGAAGTTTTATCCTGGCACTGGAGCTGCTGACGAGGTTGGAACCATGGGGGCTGAAGGATACTGTGTGAACGTTCCATGGAGTTGTGGTGGAGTTGGTGACAATGATTACATATATGCATTTCAGCATGTTGTGCTTCCTATAGCTTCTGAGTTTGCTCCCGATTTCACCATCATATCAGCAGGATTTGATGCAGCACGAGGTGATCCACTGGGATGCTGTGATGTTACTCCTGCGGGCTATGAAAAGATGACACACATGTTGTCTGACTTGTCTGGAGGAAAGATGCTTGTTATTCTTGAGGGCGGTTACAATCTCCGTTCAATATCGTCTTCTGCTACTGCAGTAATCAAGGTATTGCTGGGTGAAAGTCCAGGATGTGAATTGGACACCACTTTACCTTCCAGATCCGGCCTACAAACCGTTCTGGAGGTCCTTCAAATTCAAAATAAATACTGGCCTGCTCTCGGATCCAGCCTTACGAAATTGCAGTCACAAATGAAAACGTACTCTGTTCAAAACAAAAAAAAGCAAATTAAAAAGAGCCGGCGGACTCTTGCACCATTGTTTTGGAAATGGGGAAGGAAAGCTCTATTGTATCATCTTTTAAACGGGCATTTCCATGTAAACCGGAAGGATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05034 ko05165 ko05203 map05034 map05165 map05203
Pfam Domains
Protein Families
Hist_deacetyl

Protein Analysis

574

Amino Acids

62.56

Weight (kDa)

6.25

Isoelectric Point (pI)

38.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hist_deacetyl PF00850 190 - 479 3.6e-93 Histone deacetylase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 794, 941
AccB1I GGYRCC 1 cut(s) 639
AccB7I CCANNNNNTGG 1 cut(s) 697
AccII CGCG 1 cut(s) 672
AciI CCGC 5 cut(s) 23, 566, 1313, 1383, 1627
AclI AACGTT 1 cut(s) 1149
AclWI GGATC 6 cut(s) 275, 288, 1277, 1479, 1542, 1555
AcoI YGGCCR 1 cut(s) 24
AcsI RAATTY 1 cut(s) 1518
AcuI CTGAAG 2 cut(s) 665, 1152
AcvI CACGTG 1 cut(s) 785
AdeI CACNNNGTG 1 cut(s) 1280
AfaI GTAC 3 cut(s) 239, 331, 1586
AfiI CCNNNNNNNGG 5 cut(s) 344, 697, 870, 1097, 1544
AflIII ACRYGT 2 cut(s) 234, 1335
AgsI TTSAA 8 cut(s) 432, 551, 710, 741, 1401, 1517, 1523, 1595
AjiI CACGTC 1 cut(s) 845
AjnI CCWGG 4 cut(s) 631, 877, 1090, 1450
AluBI AGCT 6 cut(s) 59, 93, 620, 1103, 1223, 1667
AluI AGCT 6 cut(s) 59, 93, 620, 1103, 1223, 1667
Alw26I GTCTC 1 cut(s) 437
AlwI GGATC 6 cut(s) 275, 288, 1277, 1479, 1542, 1555
AlwNI CAGNNNCTG 1 cut(s) 941
Ama87I CYCGRG 1 cut(s) 94
AoxI GGCC 5 cut(s) 24, 727, 872, 1489, 1535
ApeKI GCWGC 8 cut(s) 203, 602, 788, 800, 932, 941, 1103, 1271
ApoI RAATTY 1 cut(s) 1518
ArsI GACNNNNNNTTYG 2 cut(s) 1553, 1585
Asp700I GAANNNNTTC 2 cut(s) 314, 678
AspS9I GGNCC 2 cut(s) 688, 1510
AsuHPI GGTGA 6 cut(s) 359, 742, 1187, 1237, 1292, 1454
AsuNHI GCTAGC 1 cut(s) 605
AvaI CYCGRG 1 cut(s) 94
AvaII GGWCC 2 cut(s) 688, 1510
BamHI GGATCC 2 cut(s) 280, 1547
BanI GGYRCC 1 cut(s) 639
BanII GRGCYC 1 cut(s) 101
BauI CACGAG 1 cut(s) 1275
BbrPI CACGTG 1 cut(s) 785
BbsI GAAGAC 3 cut(s) 29, 237, 1401
BbvI GCAGC 8 cut(s) 215, 589, 775, 812, 928, 944, 1090, 1283
BccI CCATC 3 cut(s) 651, 679, 1256
BciT130I CCWGG 4 cut(s) 633, 879, 1092, 1452
BciVI GTATCC 1 cut(s) 1130
BclI TGATCA 2 cut(s) 355, 1030
BcoDI GTCTC 1 cut(s) 437
BfaI CTAG 5 cut(s) 117, 459, 606, 657, 792
BfmI CTRYAG 4 cut(s) 510, 615, 1218, 1419
BfuAI ACCTGC 2 cut(s) 794, 941
BfuI GTATCC 1 cut(s) 1130
BisI GCNGC 9 cut(s) 24, 204, 603, 789, 801, 933, 942, 1104, 1272
BlsI GCNGC 9 cut(s) 25, 205, 604, 790, 802, 934, 943, 1105, 1273
Bme1390I CCNGG 4 cut(s) 633, 879, 1092, 1452
Bme18I GGWCC 2 cut(s) 688, 1510
BmeT110I CYCGRG 1 cut(s) 94
BmgBI CACGTC 1 cut(s) 845
BmgT120I GGNCC 2 cut(s) 688, 1510
BmiI GGNNCC 5 cut(s) 282, 478, 641, 1120, 1549
BmrFI CCNGG 4 cut(s) 633, 879, 1092, 1452
BmrI ACTGGG 1 cut(s) 1298
BmsI GCATC 5 cut(s) 163, 425, 1258, 1283, 1353
BmtI GCTAGC 1 cut(s) 609
BmuI ACTGGG 1 cut(s) 1298
BpiI GAAGAC 3 cut(s) 29, 237, 1401
BpmI CTGGAG 3 cut(s) 1119, 1374, 1526
BpuEI CTTGAG 2 cut(s) 418, 1397
BsaAI YACGTR 1 cut(s) 785
BsaBI GATNNNNATC 3 cut(s) 279, 354, 999
BsaJI CCNNGG 2 cut(s) 1122, 1154
BsaWI WCCGGW 1 cut(s) 1707
BsaXI ACNNNNNCTCC 4 cut(s) 461, 491, 1150, 1180
Bsc4I CCNNNNNNNGG 5 cut(s) 344, 697, 870, 1097, 1544
Bse118I RCCGGY 1 cut(s) 1623
Bse1I ACTGG 3 cut(s) 1102, 1293, 1538
Bse3DI GCAATG 1 cut(s) 597
Bse8I GATNNNNATC 3 cut(s) 279, 354, 999
BseBI CCWGG 4 cut(s) 633, 879, 1092, 1452
BseDI CCNNGG 2 cut(s) 1122, 1154
BseGI GGATG 6 cut(s) 268, 562, 643, 1000, 1298, 1460
BseJI GATNNNNATC 3 cut(s) 279, 354, 999
BseLI CCNNNNNNNGG 5 cut(s) 344, 697, 870, 1097, 1544
BseMI GCAATG 1 cut(s) 597
BseMII CTCAG 2 cut(s) 432, 1218
BseNI ACTGG 3 cut(s) 1102, 1293, 1538
BseX3I CGGCCG 1 cut(s) 24
BseXI GCAGC 8 cut(s) 215, 589, 775, 812, 928, 944, 1090, 1283
BseYI CCCAGC 1 cut(s) 1438
BsgI GTGCAG 1 cut(s) 304
Bsh1236I CGCG 1 cut(s) 672
Bsh1285I CGRYCG 1 cut(s) 27
BshFI GGCC 5 cut(s) 26, 729, 874, 1491, 1537
BshNI GGYRCC 1 cut(s) 639
BsiEI CGRYCG 1 cut(s) 27
BsiHKCI CYCGRG 1 cut(s) 94
BsiSI CCGG 3 cut(s) 1488, 1624, 1708
BslI CCNNNNNNNGG 5 cut(s) 344, 697, 870, 1097, 1544
BsmAI GTCTC 1 cut(s) 437
BsnI GGCC 5 cut(s) 26, 729, 874, 1491, 1537
BsoBI CYCGRG 1 cut(s) 94
Bsp1286I GDGCHC 1 cut(s) 101
Bsp1407I TGTACA 2 cut(s) 237, 329
Bsp143I GATC 8 cut(s) 280, 355, 583, 817, 1030, 1282, 1484, 1547
Bsp19I CCATGG 2 cut(s) 1122, 1154
Bsp68I TCGCGA 1 cut(s) 672
BspACI CCGC 5 cut(s) 23, 566, 1313, 1383, 1627
BspANI GGCC 5 cut(s) 26, 729, 874, 1491, 1537
BspCNI CTCAG 2 cut(s) 433, 1219
BspFNI CGCG 1 cut(s) 672
BspLI GGNNCC 5 cut(s) 282, 478, 641, 1120, 1549
BspMAI CTGCAG 1 cut(s) 1423
BspMI ACCTGC 2 cut(s) 794, 941
BspOI GCTAGC 1 cut(s) 609
BspPI GGATC 6 cut(s) 275, 288, 1277, 1479, 1542, 1555
BspT107I GGYRCC 1 cut(s) 639
BsrDI GCAATG 1 cut(s) 597
BsrFI RCCGGY 1 cut(s) 1623
BsrGI TGTACA 2 cut(s) 237, 329
BsrI ACTGG 3 cut(s) 1102, 1293, 1538
BssAI RCCGGY 1 cut(s) 1623
BssECI CCNNGG 2 cut(s) 1122, 1154
BssMI GATC 8 cut(s) 280, 355, 583, 817, 1030, 1282, 1484, 1547
BssSI CACGAG 1 cut(s) 1275
BssT1I CCWWGG 2 cut(s) 1122, 1154
Bst2BI CACGAG 1 cut(s) 1275
Bst2UI CCWGG 4 cut(s) 633, 879, 1092, 1452
Bst4CI ACNGT 4 cut(s) 123, 329, 1142, 1501
BstAPI GCANNNNNTGC 4 cut(s) 788, 938, 941, 1210
BstAUI TGTACA 2 cut(s) 237, 329
BstBAI YACGTR 1 cut(s) 785
BstC8I GCNNGC 4 cut(s) 607, 1315, 1539, 1625
BstDEI CTNAG 3 cut(s) 441, 969, 1227
BstDSI CCRYGG 2 cut(s) 1122, 1154
BstF5I GGATG 6 cut(s) 268, 562, 643, 1000, 1298, 1460
BstFNI CGCG 1 cut(s) 672
BstKTI GATC 8 cut(s) 283, 358, 586, 820, 1033, 1285, 1487, 1550
BstMAI GTCTC 1 cut(s) 437
BstMBI GATC 8 cut(s) 280, 355, 583, 817, 1030, 1282, 1484, 1547
BstMCI CGRYCG 1 cut(s) 27
BstNI CCWGG 4 cut(s) 633, 879, 1092, 1452
BstNSI RCATGY 4 cut(s) 238, 299, 1208, 1339
BstSCI CCNGG 4 cut(s) 631, 877, 1090, 1450
BstSFI CTRYAG 4 cut(s) 510, 615, 1218, 1419
BstUI CGCG 1 cut(s) 672
BstV1I GCAGC 8 cut(s) 215, 589, 775, 812, 928, 944, 1090, 1283
BstV2I GAAGAC 3 cut(s) 29, 237, 1401
BstX2I RGATCY 3 cut(s) 280, 1484, 1547
BstXI CCANNNNNNTGG 1 cut(s) 1647
BstYI RGATCY 3 cut(s) 280, 1484, 1547
BstZI CGGCCG 1 cut(s) 24
BsuI GTATCC 1 cut(s) 1130
BsuRI GGCC 5 cut(s) 26, 729, 874, 1491, 1537
BtgI CCRYGG 2 cut(s) 1122, 1154
BtrI CACGTC 1 cut(s) 845
BtsCI GGATG 6 cut(s) 268, 562, 643, 1000, 1298, 1460
BtsI GCAGTG 1 cut(s) 504
BtsIMutI CAGTG 4 cut(s) 438, 504, 1095, 1286
BtuMI TCGCGA 1 cut(s) 672
BveI ACCTGC 2 cut(s) 794, 941
Cac8I GCNNGC 4 cut(s) 607, 1315, 1539, 1625
CaiI CAGNNNCTG 1 cut(s) 941
Cfr10I RCCGGY 1 cut(s) 1623
Cfr13I GGNCC 2 cut(s) 688, 1510
CseI GACGC 1 cut(s) 480
Csp6I GTAC 3 cut(s) 238, 330, 1585
CviAII CATG 9 cut(s) 235, 296, 887, 1070, 1123, 1155, 1205, 1336, 1700
CviQI GTAC 3 cut(s) 238, 330, 1585
DdeI CTNAG 3 cut(s) 441, 969, 1227
DpnI GATC 8 cut(s) 282, 357, 585, 819, 1032, 1284, 1486, 1549
DpnII GATC 8 cut(s) 280, 355, 583, 817, 1030, 1282, 1484, 1547
DraI TTTAAA 1 cut(s) 1686
DraIII CACNNNGTG 1 cut(s) 1280
EaeI YGGCCR 1 cut(s) 24
EagI CGGCCG 1 cut(s) 24
EciI GGCGGA 1 cut(s) 1642
EclXI CGGCCG 1 cut(s) 24
Eco130I CCWWGG 2 cut(s) 1122, 1154
Eco147I AGGCCT 1 cut(s) 874
Eco24I GRGCYC 1 cut(s) 101
Eco47I GGWCC 2 cut(s) 688, 1510
Eco52I CGGCCG 1 cut(s) 24
Eco57I CTGAAG 2 cut(s) 665, 1152
Eco72I CACGTG 1 cut(s) 785
Eco88I CYCGRG 1 cut(s) 94
EcoO109I RGGNCCY 1 cut(s) 1510
EcoRII CCWGG 4 cut(s) 631, 877, 1090, 1450
EcoT14I CCWWGG 2 cut(s) 1122, 1154
EcoT22I ATGCAT 1 cut(s) 1198
EcoT38I GRGCYC 1 cut(s) 101
ErhI CCWWGG 2 cut(s) 1122, 1154
FaeI CATG 9 cut(s) 238, 299, 890, 1073, 1126, 1158, 1208, 1339, 1703
FatI CATG 9 cut(s) 234, 295, 886, 1069, 1122, 1154, 1204, 1335, 1699
FauI CCCGC 1 cut(s) 1306
FauNDI CATATG 2 cut(s) 732, 763
FbaI TGATCA 2 cut(s) 355, 1030
Fnu4HI GCNGC 9 cut(s) 24, 204, 603, 789, 801, 933, 942, 1104, 1272
FokI GGATG 6 cut(s) 275, 549, 630, 1007, 1305, 1467
FriOI GRGCYC 1 cut(s) 101
Fsp4HI GCNGC 9 cut(s) 24, 204, 603, 789, 801, 933, 942, 1104, 1272
FspBI CTAG 5 cut(s) 117, 459, 606, 657, 792
GluI GCNGC 9 cut(s) 24, 204, 603, 789, 801, 933, 942, 1104, 1272
GsaI CCCAGC 1 cut(s) 1442
GsuI CTGGAG 3 cut(s) 1119, 1374, 1526
HaeIII GGCC 5 cut(s) 26, 729, 874, 1491, 1537
HapII CCGG 3 cut(s) 1488, 1624, 1708
HgaI GACGC 1 cut(s) 480
Hin1II CATG 9 cut(s) 238, 299, 890, 1073, 1126, 1158, 1208, 1339, 1703
HincII GTYRAC 1 cut(s) 718
HindII GTYRAC 1 cut(s) 718
HinfI GANTC 5 cut(s) 386, 428, 485, 710, 1630
HpaII CCGG 3 cut(s) 1488, 1624, 1708
HphI GGTGA 6 cut(s) 359, 742, 1187, 1237, 1292, 1454
Hpy166II GTNNAC 3 cut(s) 718, 1147, 1705
Hpy188I TCNGA 7 cut(s) 454, 544, 684, 1035, 1228, 1345, 1547
Hpy8I GTNNAC 3 cut(s) 718, 1147, 1705
HpyAV CCTTC 9 cut(s) 140, 295, 630, 1067, 1127, 1488, 1523, 1653, 1705
HpyCH4III ACNGT 4 cut(s) 123, 329, 1142, 1501
HpyCH4IV ACGT 4 cut(s) 784, 844, 1149, 1583
HpyF3I CTNAG 3 cut(s) 441, 969, 1227
HpySE526I ACGT 4 cut(s) 784, 844, 1149, 1583
Hsp92II CATG 9 cut(s) 238, 299, 890, 1073, 1126, 1158, 1208, 1339, 1703
KroI GCCGGC 1 cut(s) 1623
KroNI GCCGGC 1 cut(s) 1625
Ksp22I TGATCA 2 cut(s) 355, 1030
Kzo9I GATC 8 cut(s) 280, 355, 583, 817, 1030, 1282, 1484, 1547
LmnI GCTCC 4 cut(s) 482, 700, 1100, 1240
Lsp1109I GCAGC 8 cut(s) 215, 589, 775, 812, 928, 944, 1090, 1283
LweI GCATC 5 cut(s) 163, 425, 1258, 1283, 1353
MaeI CTAG 5 cut(s) 117, 459, 606, 657, 792
MaeII ACGT 4 cut(s) 784, 844, 1149, 1583
MaeIII GTNAC 4 cut(s) 1175, 1303, 1385, 1569
MalI GATC 8 cut(s) 282, 357, 585, 819, 1032, 1284, 1486, 1549
MboI GATC 8 cut(s) 280, 355, 583, 817, 1030, 1282, 1484, 1547
MboII GAAGA 4 cut(s) 29, 242, 686, 1401
MfeI CAATTG 1 cut(s) 831
MflI RGATCY 3 cut(s) 280, 1484, 1547
MhlI GDGCHC 1 cut(s) 101
MluCI AATT 7 cut(s) 136, 648, 831, 1460, 1518, 1562, 1611
MlyI GAGTC 1 cut(s) 1624
MmeI TCCRAC 2 cut(s) 313, 1096
Mph1103I ATGCAT 1 cut(s) 1198
MroNI GCCGGC 1 cut(s) 1623
MroXI GAANNNNTTC 2 cut(s) 314, 678
MseI TTAA 3 cut(s) 191, 1614, 1685
MslI CAYNNNNRTG 7 cut(s) 363, 891, 927, 1008, 1068, 1291, 1698
MspA1I CMGCKG 1 cut(s) 620
MspI CCGG 3 cut(s) 1488, 1624, 1708
MspR9I CCNGG 4 cut(s) 633, 879, 1092, 1452
MunI CAATTG 1 cut(s) 831
MvaI CCWGG 4 cut(s) 633, 879, 1092, 1452
MvnI CGCG 1 cut(s) 672
NaeI GCCGGC 1 cut(s) 1625
NcoI CCATGG 2 cut(s) 1122, 1154
NdeI CATATG 2 cut(s) 732, 763
NdeII GATC 8 cut(s) 280, 355, 583, 817, 1030, 1282, 1484, 1547
NgoMIV GCCGGC 1 cut(s) 1623
NheI GCTAGC 1 cut(s) 605
NlaIII CATG 9 cut(s) 238, 299, 890, 1073, 1126, 1158, 1208, 1339, 1703
NlaIV GGNNCC 5 cut(s) 282, 478, 641, 1120, 1549
NmeAIII GCCGAG 1 cut(s) 52
NmuCI GTSAC 2 cut(s) 1175, 1569
NruI TCGCGA 1 cut(s) 672
NsiI ATGCAT 1 cut(s) 1198
NspI RCATGY 4 cut(s) 238, 299, 1208, 1339
PceI AGGCCT 1 cut(s) 874
PciI ACATGT 2 cut(s) 234, 1335
PdiI GCCGGC 1 cut(s) 1625
PdmI GAANNNNTTC 2 cut(s) 314, 678
PfeI GAWTC 4 cut(s) 386, 428, 485, 710
PflFI GACNNNGTC 2 cut(s) 123, 448
PflMI CCANNNNNTGG 1 cut(s) 697
PfoI TCCNGGA 2 cut(s) 631, 1450
PkrI GCNGC 9 cut(s) 25, 205, 604, 790, 802, 934, 943, 1105, 1273
PleI GAGTC 1 cut(s) 1624
PmaCI CACGTG 1 cut(s) 785
PmlI CACGTG 1 cut(s) 785
PpsI GAGTC 1 cut(s) 1624
Ppu21I YACGTR 1 cut(s) 785
PpuMI RGGWCCY 1 cut(s) 1510
PscI ACATGT 2 cut(s) 234, 1335
Psp1406I AACGTT 1 cut(s) 1149
Psp5II RGGWCCY 1 cut(s) 1510
Psp6I CCWGG 4 cut(s) 631, 877, 1090, 1450
PspCI CACGTG 1 cut(s) 785
PspFI CCCAGC 1 cut(s) 1438
PspGI CCWGG 4 cut(s) 631, 877, 1090, 1450
PspN4I GGNNCC 5 cut(s) 282, 478, 641, 1120, 1549
PspPI GGNCC 2 cut(s) 688, 1510
PspPPI RGGWCCY 1 cut(s) 1510
PstI CTGCAG 1 cut(s) 1423
PstNI CAGNNNCTG 1 cut(s) 941
PsuI RGATCY 3 cut(s) 280, 1484, 1547
PsyI GACNNNGTC 2 cut(s) 123, 448
PvuII CAGCTG 1 cut(s) 620
RruI TCGCGA 1 cut(s) 672
RsaI GTAC 3 cut(s) 239, 331, 1586
RsaNI GTAC 3 cut(s) 238, 330, 1585
RseI CAYNNNNRTG 7 cut(s) 363, 891, 927, 1008, 1068, 1291, 1698
SaqAI TTAA 3 cut(s) 191, 1614, 1685
SatI GCNGC 9 cut(s) 24, 204, 603, 789, 801, 933, 942, 1104, 1272
Sau3AI GATC 8 cut(s) 280, 355, 583, 817, 1030, 1282, 1484, 1547
Sau96I GGNCC 2 cut(s) 688, 1510
SchI GAGTC 1 cut(s) 1624
ScrFI CCNGG 4 cut(s) 633, 879, 1092, 1452
SduI GDGCHC 1 cut(s) 101
SfaNI GCATC 5 cut(s) 163, 425, 1258, 1283, 1353
SfcI CTRYAG 4 cut(s) 510, 615, 1218, 1419
SinI GGWCC 2 cut(s) 688, 1510
SmiMI CAYNNNNRTG 7 cut(s) 363, 891, 927, 1008, 1068, 1291, 1698
SmlI CTYRAG 2 cut(s) 397, 1376
SmoI CTYRAG 2 cut(s) 397, 1376
Sse9I AATT 7 cut(s) 136, 648, 831, 1460, 1518, 1562, 1611
SseBI AGGCCT 1 cut(s) 874
SsiI CCGC 5 cut(s) 23, 566, 1313, 1383, 1627
SspI AATATT 1 cut(s) 1026
SspMI CTAG 5 cut(s) 117, 459, 606, 657, 792
StuI AGGCCT 1 cut(s) 874
StyD4I CCNGG 4 cut(s) 631, 877, 1090, 1450
StyI CCWWGG 2 cut(s) 1122, 1154
TaaI ACNGT 4 cut(s) 123, 329, 1142, 1501
TaiI ACGT 4 cut(s) 787, 847, 1152, 1586
TaqI TCGA 4 cut(s) 252, 373, 519, 592
TaqII GACCGA 1 cut(s) 1033
TasI AATT 7 cut(s) 136, 648, 831, 1460, 1518, 1562, 1611
TatI WGTACW 2 cut(s) 237, 329
TauI GCSGC 1 cut(s) 26
TfiI GAWTC 4 cut(s) 386, 428, 485, 710
Tru1I TTAA 3 cut(s) 191, 1614, 1685
Tru9I TTAA 3 cut(s) 191, 1614, 1685
TscAI CASTG 4 cut(s) 445, 511, 1102, 1293
TseFI GTSAC 2 cut(s) 1175, 1569
TseI GCWGC 8 cut(s) 203, 602, 788, 800, 932, 941, 1103, 1271
Tsp45I GTSAC 2 cut(s) 1175, 1569
TspDTI ATGAA 7 cut(s) 323, 569, 786, 989, 1086, 1335, 1592
TspGWI ACGGA 2 cut(s) 120, 1385
TspRI CASTG 4 cut(s) 445, 511, 1102, 1293
Tth111I GACNNNGTC 2 cut(s) 123, 448
Van91I CCANNNNNTGG 1 cut(s) 697
VpaK11BI GGWCC 2 cut(s) 688, 1510
XapI RAATTY 1 cut(s) 1518
XbaI TCTAGA 1 cut(s) 116
XceI RCATGY 4 cut(s) 238, 299, 1208, 1339
XmnI GAANNNNTTC 2 cut(s) 314, 678
XspI CTAG 5 cut(s) 117, 459, 606, 657, 792
Zsp2I ATGCAT 1 cut(s) 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.