Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0017079

Physical Location & Seq

Genomic Coordinates Reverse (-)

12631988 .. 12634186

Gene Structure 2199 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g21000.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGCACCGCCGCCTCTCCATTTTCACCCACAAGATTCTCACTAATCCCAATTATACCCTCACCAAGCAAACCACCTCCTTCTTCCTCTCTTCCCAATTCAATCCGAGAACCAACAGATTAGGGCTACTGCGGGTTCTTTCATATGCGCCGTTGAATCGTCGCACCGCCGATCCCGAAGACCCGTCCAATTTGATCAAGGAGGATGGGGTTTCGATTCTCTCCCAAATGTGGATTGAGAATTTCAGAGAGCCTGATAGGATTGTGACCAATTTGACCTCCTACATTCGGAGATTCGAGCTCTGGGTGCTGGCTTATCAGAAGGTCTGCGCCGACGATATGGGGGCTTATATGCCCCGAAGCTCGATTCAGAGGTCGGCGCTGGAGGACTTGTTGGCACTTAGAAATGCTGTTCTTGATGGTAGGTTTAGGTGGGGAGCTAGGCTTGAGTTTTATATCAAGTCACCTAAGGATAAGACCGAGTACGAGTCTTTGTCTAAGAGGAAGATCAAGGCTATCTTGACCACCACGCAGCCGTCCCCGTTTCAGGATAAGTTGGTTCAGGAGGTGCTATTGATGGTGTTGGAGCCGATATATGAGTCTAGGTTCTCGCAGAAGTCGTTTGCGTTTAGACCCGGGAGAAATGCGCATACTGCGTTGAGGGTGATTAGGAGGAGTTTCGCAGGGTATTTGTGGTATATAAAGGGGGATTTGAGTACAGTGTTGGATGGGATGAAGGTGGGGTTGGTGATTAATGCTCTGATCAGGGATGTGAGGGATAAGAAGGTGGTTGATTTGATTAAAACAGCTTTGGTTACACCGGTGGTTACTAGTAATGATGATGGTGTAGTGAAGAAGAAAAAGTCGAGGAAGTATCAGAAGAAGAGGGTGCTGGCAGAGGATGAACCGAAGCCAGACCCTTATTGGTTGGAGACGTTTTTTGGGTTCGCGCCTGAGGAGGTAGAGAAGCTTCCTTCTTGGGGACATTGTGGGATACTCAGCCCCCTTTTGGCTAATATCTGTCTAGATGAATTGGACTGCTGGATGGAGGGAAAGATTAAGGAGTTTTATCATCCGTCAAAGAGTGATGTCATATGGAATAGCCCGGAAGGCGAGGCAGAACAGGGAAATACGTCTTGGCCTGAATTTGTTCCTACAAGTGGGCCAGATAAGACCAGAAAGATGGATTATATAAGATATGGGGGTCATATTTTGATTGGTGTTCGAGGACCTCGAGCAGATGCCGCCACATTGAGAAAACAGTTGATTGAGTTCTGTGATCAAAAGTATATGCTCAAGCTTGACAGTGAGAGCCTCCCTATAGAACACATTACTAAGGGTATATTGTTTCTTGATCATGTGTTGTGTCGCAGAGTTGTCTACCCAACTCTTCGTTACACTGCTACTGGTGGGAAAATCATTAGTGAGAAGGGTGTAGGCACTCTTTTGTCAGTTACTGCAAGCCTGAAACAGTGCATCAAGCAATTTAGGAAACTGAACTTTTTGAAAGGGGATAGGGATCCTGATCCACAGCCTTGTTTCAGAATGTTTCATGCCACTCAAGCTCATACTAATGCGCAAATGAACAAGTTTCTATCAACAATGGTTGAGTGGTATAGGTATGCAGATAATCGCAAAAAAGTTGTAAACTTTTGTGCTTACATTTTAAGGGGTTCACTTGCAAAGCTCTATGCAGCAAAGTACAAGCTCCGTTCACGTGCAAAGGTGTACAAGATTGGTGATAGGAATCTGAGTCGTCCTTTGAAGGAGAAGAAGGGGCAGTCACCCGAGTACCATAATTTGTTGAGGATGGGTCTTGTTGAGTCAATTGATGGGCTTCAGTATACCAGGATGTCTCTTGTACCTGAGACTGATTACACTCCTTTCCCAAGTAACTGGAGACCTGAACACGAGAATGCATTGCTTGAATATATAAGGCTTGATGATCCAAAAACTTTAGAGGAGCAACGCAGGTGTATCATGGATCAAGGTCTTGTTTCTCCACAGGATTACATCTCAATGCTTGTTTGGAACTACAAGAAAAGTGCTGTTCCGTTGGATCAGTTTACGTTCGTCAAAAGTGGCAGCAGTGACATTGAAAGCAATGAGCAATTGCTGCTTGATTCAAATCAGGATAACCTTGAAAACAGAACTATAGAAGAGGAGGAAAAGGGTGAACGGTTTTGTGTATCACAATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:0090615 GO:0140053 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

733

Amino Acids

84.58

Weight (kDa)

9.24

Isoelectric Point (pI)

48.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Intron_maturas2	PF01348	484 - 587	7.2e-08	Type II intron maturase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0017079)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46920
fragaria_vesca	FvH4_5g21000
malus_domestica	MD06G1041700.v1.1
prunus_persica	Prupe.5G048500_v2.0.a1
pyrus_communis	pycom06g03520
rosa_chinensis	RchiOBHm_Chr7g0208021
rosa_laevigata	RLG00000003262
rosa_roxburghii	Rroxscaffold_3G00250890
rosa_rugosa	Rorug07G0100900
rosa_samantha	Rh7AG235100 Rh7BG230400 Rh7CG250000 Rh7DG241000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1959
Acc16I	TGCGCA	2 cut(s)	645, 1575
Acc36I	ACCTGC	1 cut(s)	1959
AccI	GTMKAC	2 cut(s)	1377, 1841
AccII	CGCG	1 cut(s)	947
AciI	CCGC	5 cut(s)	7, 10, 130, 165, 1242
AclWI	GGATC	7 cut(s)	164, 1511, 1517, 1524, 1937, 1989, 2064
AcsI	RAATTY	2 cut(s)	238, 1142
AcuI	CTGAAG	1 cut(s)	1820
AcvI	CACGTG	1 cut(s)	1715
AfaI	GTAC	6 cut(s)	482, 715, 1700, 1727, 1790, 1860
AfiI	CCNNNNNNNGG	6 cut(s)	228, 285, 544, 977, 1006, 1157
AgeI	ACCGGT	1 cut(s)	817
AgsI	TTSAA	8 cut(s)	100, 154, 1504, 1762, 1925, 2096, 2124, 2141
AhlI	ACTAGT	1 cut(s)	827
AjnI	CCWGG	1 cut(s)	1844
AjuI	GAANNNNNNNTTGG	4 cut(s)	725, 757, 1117, 1149
AluBI	AGCT	9 cut(s)	298, 360, 437, 806, 967, 1297, 1562, 1684, 1705
AluI	AGCT	9 cut(s)	298, 360, 437, 806, 967, 1297, 1562, 1684, 1705
Alw21I	GWGCWC	1 cut(s)	300
Alw26I	GTCTC	4 cut(s)	923, 1857, 1859, 1891
AlwI	GGATC	7 cut(s)	164, 1511, 1517, 1524, 1937, 1989, 2064
AlwNI	CAGNNNCTG	1 cut(s)	1454
Ama87I	CYCGRG	3 cut(s)	632, 1230, 1784
AoxI	GGCC	2 cut(s)	1136, 1160
ApeKI	GCWGC	4 cut(s)	529, 1691, 2082, 2113
ApoI	RAATTY	2 cut(s)	238, 1142
AseI	ATTAAT	1 cut(s)	750
AsiGI	ACCGGT	1 cut(s)	817
Asp700I	GAANNNNTTC	1 cut(s)	1146
AspLEI	GCGC	6 cut(s)	148, 329, 379, 646, 949, 1576
AspS9I	GGNCC	2 cut(s)	1160, 1226
AsuC2I	CCSGG	3 cut(s)	633, 634, 1103
AsuHPI	GGTGA	8 cut(s)	16, 52, 453, 673, 757, 1748, 1773, 2183
AvaI	CYCGRG	3 cut(s)	632, 1230, 1784
AvaII	GGWCC	1 cut(s)	1226
AxyI	CCTNAGG	2 cut(s)	465, 951
BaeI	ACNNNNGTAYC	2 cut(s)	1772, 1805
BamHI	GGATCC	1 cut(s)	1516
BanII	GRGCYC	1 cut(s)	300
BarI	GAAGNNNNNNTAC	2 cut(s)	951, 983
BauI	CACGAG	1 cut(s)	1907
BbrPI	CACGTG	1 cut(s)	1715
BbsI	GAAGAC	1 cut(s)	183
Bbv12I	GWGCWC	1 cut(s)	300
BbvI	GCAGC	4 cut(s)	541, 1703, 2094, 2100
BccI	CCATC	9 cut(s)	197, 410, 568, 719, 833, 1036, 1174, 1801, 1823
BceAI	ACGGC	2 cut(s)	133, 517
BciT130I	CCWGG	1 cut(s)	1846
BciVI	GTATCC	1 cut(s)	984
BclI	TGATCA	4 cut(s)	192, 759, 1276, 1351
BcnI	CCSGG	3 cut(s)	633, 634, 1103
BcoDI	GTCTC	4 cut(s)	923, 1857, 1859, 1891
BcuI	ACTAGT	1 cut(s)	827
BfaI	CTAG	4 cut(s)	438, 600, 828, 1022
BfmI	CTRYAG	2 cut(s)	1317, 2151
BfoI	RGCGCY	1 cut(s)	380
BfuAI	ACCTGC	1 cut(s)	1959
BfuI	GTATCC	1 cut(s)	984
BglI	GCCNNNNNGGC	1 cut(s)	1107
BisI	GCNGC	6 cut(s)	10, 530, 1242, 1692, 2083, 2114
BlsI	GCNGC	6 cut(s)	11, 531, 1243, 1693, 2084, 2115
Bme1390I	CCNGG	4 cut(s)	633, 634, 1103, 1846
Bme18I	GGWCC	1 cut(s)	1226
BmeT110I	CYCGRG	3 cut(s)	632, 1230, 1784
BmgT120I	GGNCC	2 cut(s)	1160, 1226
BmiI	GGNNCC	2 cut(s)	585, 1518
BmrFI	CCNGG	4 cut(s)	633, 634, 1103, 1846
BmsI	GCATC	2 cut(s)	1228, 1482
BpiI	GAAGAC	1 cut(s)	183
BpmI	CTGGAG	2 cut(s)	401, 1915
BpuEI	CTTGAG	3 cut(s)	464, 1277, 1542
BpuMI	CCSGG	3 cut(s)	633, 634, 1103
BsaAI	YACGTR	1 cut(s)	1715
BsaBI	GATNNNNATC	4 cut(s)	1515, 1521, 1743, 2124
BsaI	GGTCTC	1 cut(s)	1891
BsaJI	CCNNGG	1 cut(s)	632
BsaWI	WCCGGW	1 cut(s)	817
BsaXI	ACNNNNNCTCC	2 cut(s)	374, 404
Bsc4I	CCNNNNNNNGG	6 cut(s)	228, 285, 544, 977, 1006, 1157
Bse118I	RCCGGY	1 cut(s)	817
Bse1I	ACTGG	2 cut(s)	1408, 1898
Bse21I	CCTNAGG	2 cut(s)	465, 951
Bse3DI	GCAATG	2 cut(s)	1916, 2107
Bse8I	GATNNNNATC	4 cut(s)	1515, 1521, 1743, 2124
BseBI	CCWGG	1 cut(s)	1846
BseDI	CCNNGG	1 cut(s)	632
BseGI	GGATG	9 cut(s)	208, 730, 735, 772, 904, 1047, 1069, 1812, 1854
BseJI	GATNNNNATC	4 cut(s)	1515, 1521, 1743, 2124
BseLI	CCNNNNNNNGG	6 cut(s)	228, 285, 544, 977, 1006, 1157
BseMI	GCAATG	2 cut(s)	1916, 2107
BseMII	CTCAG	4 cut(s)	942, 1009, 1739, 1854
BseNI	ACTGG	2 cut(s)	1408, 1898
BseRI	GAGGAG	4 cut(s)	685, 968, 1973, 2174
BseXI	GCAGC	4 cut(s)	541, 1703, 2094, 2100
Bsh1236I	CGCG	1 cut(s)	947
BshFI	GGCC	2 cut(s)	1138, 1162
BshTI	ACCGGT	1 cut(s)	817
BsiHKAI	GWGCWC	1 cut(s)	300
BsiHKCI	CYCGRG	3 cut(s)	632, 1230, 1784
BsiSI	CCGG	3 cut(s)	633, 818, 1103
BslFI	GGGAC	2 cut(s)	520, 993
BslI	CCNNNNNNNGG	6 cut(s)	228, 285, 544, 977, 1006, 1157
BsmAI	GTCTC	4 cut(s)	923, 1857, 1859, 1891
BsmBI	CGTCTC	1 cut(s)	923
BsmFI	GGGAC	2 cut(s)	520, 993
BsmI	GAATGC	1 cut(s)	1918
BsnI	GGCC	2 cut(s)	1138, 1162
Bso31I	GGTCTC	1 cut(s)	1891
BsoBI	CYCGRG	3 cut(s)	632, 1230, 1784
Bsp1286I	GDGCHC	1 cut(s)	300
Bsp1407I	TGTACA	1 cut(s)	1725
BspACI	CCGC	5 cut(s)	7, 10, 130, 165, 1242
BspANI	GGCC	2 cut(s)	1138, 1162
BspCNI	CTCAG	4 cut(s)	943, 1008, 1740, 1855
BspFNI	CGCG	1 cut(s)	947
BspLI	GGNNCC	2 cut(s)	585, 1518
BspMI	ACCTGC	1 cut(s)	1959
BspPI	GGATC	7 cut(s)	164, 1511, 1517, 1524, 1937, 1989, 2064
BspTNI	GGTCTC	1 cut(s)	1891
BsrDI	GCAATG	2 cut(s)	1916, 2107
BsrFI	RCCGGY	1 cut(s)	817
BsrGI	TGTACA	1 cut(s)	1725
BsrI	ACTGG	2 cut(s)	1408, 1898
BssAI	RCCGGY	1 cut(s)	817
BssECI	CCNNGG	1 cut(s)	632
BssNAI	GTATAC	1 cut(s)	1842
BssSI	CACGAG	1 cut(s)	1907
Bst1107I	GTATAC	1 cut(s)	1842
Bst2BI	CACGAG	1 cut(s)	1907
Bst2UI	CCWGG	1 cut(s)	1846
Bst4CI	ACNGT	5 cut(s)	718, 1260, 1304, 1470, 2178
Bst6I	CTCTTC	4 cut(s)	94, 875, 1392, 2151
BstAPI	GCANNNNNTGC	1 cut(s)	2113
BstAUI	TGTACA	1 cut(s)	1725
BstBAI	YACGTR	1 cut(s)	1715
BstC8I	GCNNGC	3 cut(s)	309, 891, 1459
BstDEI	CTNAG	8 cut(s)	398, 465, 495, 951, 995, 1332, 1748, 1863
BstF5I	GGATG	9 cut(s)	208, 730, 735, 772, 904, 1047, 1069, 1812, 1854
BstFNI	CGCG	1 cut(s)	947
BstH2I	RGCGCY	1 cut(s)	380
BstHHI	GCGC	6 cut(s)	148, 329, 379, 646, 949, 1576
BstMAI	GTCTC	4 cut(s)	923, 1857, 1859, 1891
BstMWI	GCNNNNNNNGC	6 cut(s)	304, 650, 1107, 1241, 1559, 2113
BstNI	CCWGG	1 cut(s)	1846
BstSCI	CCNGG	4 cut(s)	631, 632, 1101, 1844
BstSFI	CTRYAG	2 cut(s)	1317, 2151
BstUI	CGCG	1 cut(s)	947
BstV1I	GCAGC	4 cut(s)	541, 1703, 2094, 2100
BstV2I	GAAGAC	1 cut(s)	183
BstX2I	RGATCY	1 cut(s)	1516
BstXI	CCANNNNNNTGG	2 cut(s)	1180, 1893
BstYI	RGATCY	1 cut(s)	1516
BstZ17I	GTATAC	1 cut(s)	1842
Bsu36I	CCTNAGG	2 cut(s)	465, 951
BsuI	GTATCC	1 cut(s)	984
BsuRI	GGCC	2 cut(s)	1138, 1162
BtsCI	GGATG	9 cut(s)	208, 730, 735, 772, 904, 1047, 1069, 1812, 1854
BtsI	GCAGTG	2 cut(s)	1395, 2092
BtsIMutI	CAGTG	5 cut(s)	723, 1309, 1395, 1475, 2092
BveI	ACCTGC	1 cut(s)	1959
Cac8I	GCNNGC	3 cut(s)	309, 891, 1459
CaiI	CAGNNNCTG	1 cut(s)	1454
CfoI	GCGC	6 cut(s)	148, 329, 379, 646, 949, 1576
Cfr10I	RCCGGY	1 cut(s)	817
Cfr13I	GGNCC	2 cut(s)	1160, 1226
Cfr9I	CCCGGG	1 cut(s)	632
Csp6I	GTAC	6 cut(s)	481, 714, 1699, 1726, 1789, 1859
CspAI	ACCGGT	1 cut(s)	817
CviAII	CATG	3 cut(s)	1355, 1550, 1978
CviQI	GTAC	6 cut(s)	481, 714, 1699, 1726, 1789, 1859
DdeI	CTNAG	8 cut(s)	398, 465, 495, 951, 995, 1332, 1748, 1863
Eam1104I	CTCTTC	4 cut(s)	94, 875, 1392, 2151
EarI	CTCTTC	4 cut(s)	94, 875, 1392, 2151
Ecl136II	GAGCTC	1 cut(s)	298
Eco24I	GRGCYC	1 cut(s)	300
Eco31I	GGTCTC	1 cut(s)	1891
Eco47I	GGWCC	1 cut(s)	1226
Eco53kI	GAGCTC	1 cut(s)	298
Eco57I	CTGAAG	1 cut(s)	1820
Eco72I	CACGTG	1 cut(s)	1715
Eco81I	CCTNAGG	2 cut(s)	465, 951
Eco88I	CYCGRG	3 cut(s)	632, 1230, 1784
EcoICRI	GAGCTC	1 cut(s)	298
EcoO109I	RGGNCCY	1 cut(s)	1226
EcoRII	CCWGG	1 cut(s)	1844
EcoT22I	ATGCAT	1 cut(s)	1918
EcoT38I	GRGCYC	1 cut(s)	300
Esp3I	CGTCTC	1 cut(s)	923
FaeI	CATG	3 cut(s)	1358, 1553, 1981
FalI	AAGNNNNNCTT	2 cut(s)	500, 532
FaqI	GGGAC	2 cut(s)	520, 993
FatI	CATG	3 cut(s)	1354, 1549, 1977
FauI	CCCGC	1 cut(s)	123
FauNDI	CATATG	2 cut(s)	142, 1091
FbaI	TGATCA	4 cut(s)	192, 759, 1276, 1351
FblI	GTMKAC	2 cut(s)	1377, 1841
Fnu4HI	GCNGC	6 cut(s)	10, 530, 1242, 1692, 2083, 2114
FokI	GGATG	9 cut(s)	215, 737, 742, 779, 911, 1054, 1056, 1819, 1861
FriOI	GRGCYC	1 cut(s)	300
Fsp4HI	GCNGC	6 cut(s)	10, 530, 1242, 1692, 2083, 2114
FspAI	RTGCGCAY	1 cut(s)	645
FspBI	CTAG	4 cut(s)	438, 600, 828, 1022
FspI	TGCGCA	2 cut(s)	645, 1575
GlaI	GCGC	6 cut(s)	147, 328, 378, 645, 948, 1575
GluI	GCNGC	6 cut(s)	10, 530, 1242, 1692, 2083, 2114
GsuI	CTGGAG	2 cut(s)	401, 1915
HaeII	RGCGCY	1 cut(s)	380
HaeIII	GGCC	2 cut(s)	1138, 1162
HapII	CCGG	3 cut(s)	633, 818, 1103
HhaI	GCGC	6 cut(s)	148, 329, 379, 646, 949, 1576
Hin1II	CATG	3 cut(s)	1358, 1553, 1981
Hin6I	GCGC	6 cut(s)	146, 327, 377, 644, 947, 1574
HinP1I	GCGC	6 cut(s)	146, 327, 377, 644, 947, 1574
HindIII	AAGCTT	2 cut(s)	965, 1295
HpaII	CCGG	3 cut(s)	633, 818, 1103
HphI	GGTGA	8 cut(s)	16, 52, 453, 673, 757, 1748, 1773, 2183
Hpy166II	GTNNAC	8 cut(s)	1378, 1645, 1673, 1712, 1726, 1842, 2064, 2174
Hpy188I	TCNGA	9 cut(s)	105, 245, 288, 318, 369, 759, 876, 1541, 1749
Hpy188III	TCNNGA	9 cut(s)	173, 413, 517, 545, 560, 1022, 1349, 1520, 2129
Hpy8I	GTNNAC	8 cut(s)	1378, 1645, 1673, 1712, 1726, 1842, 2064, 2174
Hpy99I	CGWCG	2 cut(s)	162, 335
HpyAV	CCTTC	9 cut(s)	88, 313, 727, 775, 981, 1100, 1420, 1756, 1765
HpyCH4III	ACNGT	5 cut(s)	718, 1260, 1304, 1470, 2178
HpyCH4IV	ACGT	4 cut(s)	932, 1130, 1714, 2066
HpyCH4V	TGCA	8 cut(s)	4, 1457, 1473, 1622, 1679, 1691, 1718, 1916
HpyF10VI	GCNNNNNNNGC	6 cut(s)	304, 650, 1107, 1241, 1559, 2113
HpyF3I	CTNAG	8 cut(s)	398, 465, 495, 951, 995, 1332, 1748, 1863
HpySE526I	ACGT	4 cut(s)	932, 1130, 1714, 2066
Hsp92II	CATG	3 cut(s)	1358, 1553, 1981
HspAI	GCGC	6 cut(s)	146, 327, 377, 644, 947, 1574
Ksp22I	TGATCA	4 cut(s)	192, 759, 1276, 1351
LmnI	GCTCC	4 cut(s)	434, 583, 1710, 1960
Lsp1109I	GCAGC	4 cut(s)	541, 1703, 2094, 2100
LweI	GCATC	2 cut(s)	1228, 1482
MaeI	CTAG	4 cut(s)	438, 600, 828, 1022
MaeII	ACGT	4 cut(s)	932, 1130, 1714, 2066
MaeIII	GTNAC	9 cut(s)	262, 459, 811, 823, 1391, 1450, 1779, 1889, 2087
MfeI	CAATTG	3 cut(s)	1824, 2108, 2192
MflI	RGATCY	1 cut(s)	1516
MhlI	GDGCHC	1 cut(s)	300
MlyI	GAGTC	4 cut(s)	494, 605, 1759, 1829
MmeI	TCCRAC	4 cut(s)	561, 702, 906, 2034
Mph1103I	ATGCAT	1 cut(s)	1918
MroXI	GAANNNNTTC	1 cut(s)	1146
MseI	TTAA	4 cut(s)	750, 798, 1056, 1664
MslI	CAYNNNNRTG	3 cut(s)	1569, 1911, 2015
MspI	CCGG	3 cut(s)	633, 818, 1103
MspR9I	CCNGG	4 cut(s)	633, 634, 1103, 1846
MunI	CAATTG	3 cut(s)	1824, 2108, 2192
Mva1269I	GAATGC	1 cut(s)	1918
MvaI	CCWGG	1 cut(s)	1846
MvnI	CGCG	1 cut(s)	947
MwoI	GCNNNNNNNGC	6 cut(s)	304, 650, 1107, 1241, 1559, 2113
NciI	CCSGG	3 cut(s)	633, 634, 1103
NdeI	CATATG	2 cut(s)	142, 1091
NlaIII	CATG	3 cut(s)	1358, 1553, 1981
NlaIV	GGNNCC	2 cut(s)	585, 1518
NmuCI	GTSAC	4 cut(s)	262, 459, 1779, 2087
NsbI	TGCGCA	2 cut(s)	645, 1575
NsiI	ATGCAT	1 cut(s)	1918
PaeR7I	CTCGAG	1 cut(s)	1230
PaqCI	CACCTGC	1 cut(s)	1959
PcsI	WCGNNNNNNNCGW	2 cut(s)	614, 1228
PctI	GAATGC	1 cut(s)	1918
PdmI	GAANNNNTTC	1 cut(s)	1146
PfeI	GAWTC	7 cut(s)	34, 154, 214, 291, 364, 1744, 2120
PinAI	ACCGGT	1 cut(s)	817
PkrI	GCNGC	6 cut(s)	11, 531, 1243, 1693, 2084, 2115
PleI	GAGTC	4 cut(s)	493, 604, 1758, 1828
PmaCI	CACGTG	1 cut(s)	1715
PmlI	CACGTG	1 cut(s)	1715
PpsI	GAGTC	4 cut(s)	493, 604, 1758, 1828
Ppu21I	YACGTR	1 cut(s)	1715
PpuMI	RGGWCCY	1 cut(s)	1226
PshBI	ATTAAT	1 cut(s)	750
Psp124BI	GAGCTC	1 cut(s)	300
Psp5II	RGGWCCY	1 cut(s)	1226
Psp6I	CCWGG	1 cut(s)	1844
PspCI	CACGTG	1 cut(s)	1715
PspGI	CCWGG	1 cut(s)	1844
PspN4I	GGNNCC	2 cut(s)	585, 1518
PspPI	GGNCC	2 cut(s)	1160, 1226
PspPPI	RGGWCCY	1 cut(s)	1226
PspXI	VCTCGAGB	1 cut(s)	1230
PstNI	CAGNNNCTG	1 cut(s)	1454
PsuI	RGATCY	1 cut(s)	1516
RsaI	GTAC	6 cut(s)	482, 715, 1700, 1727, 1790, 1860
RsaNI	GTAC	6 cut(s)	481, 714, 1699, 1726, 1789, 1859
RseI	CAYNNNNRTG	3 cut(s)	1569, 1911, 2015
SacI	GAGCTC	1 cut(s)	300
SaqAI	TTAA	4 cut(s)	750, 798, 1056, 1664
SatI	GCNGC	6 cut(s)	10, 530, 1242, 1692, 2083, 2114
Sau96I	GGNCC	2 cut(s)	1160, 1226
SchI	GAGTC	4 cut(s)	494, 605, 1759, 1829
ScrFI	CCNGG	4 cut(s)	633, 634, 1103, 1846
SduI	GDGCHC	1 cut(s)	300
SfaNI	GCATC	2 cut(s)	1228, 1482
SfcI	CTRYAG	2 cut(s)	1317, 2151
Sfr274I	CTCGAG	1 cut(s)	1230
SgrAI	CRCCGGYG	1 cut(s)	817
SinI	GGWCC	1 cut(s)	1226
SlaI	CTCGAG	1 cut(s)	1230
SmaI	CCCGGG	1 cut(s)	634
SmiMI	CAYNNNNRTG	3 cut(s)	1569, 1911, 2015
SmlI	CTYRAG	4 cut(s)	443, 1230, 1292, 1557
SmoI	CTYRAG	4 cut(s)	443, 1230, 1292, 1557
SpeI	ACTAGT	1 cut(s)	827
SsiI	CCGC	5 cut(s)	7, 10, 130, 165, 1242
SspMI	CTAG	4 cut(s)	438, 600, 828, 1022
SstI	GAGCTC	1 cut(s)	300
StyD4I	CCNGG	4 cut(s)	631, 632, 1101, 1844
TaaI	ACNGT	5 cut(s)	718, 1260, 1304, 1470, 2178
TaiI	ACGT	4 cut(s)	935, 1133, 1717, 2069
TaqI	TCGA	6 cut(s)	212, 294, 362, 863, 1222, 1231
TaqII	GACCGA	1 cut(s)	491
TatI	WGTACW	3 cut(s)	713, 1698, 1725
TauI	GCSGC	2 cut(s)	12, 1244
TfiI	GAWTC	7 cut(s)	34, 154, 214, 291, 364, 1744, 2120
Tru1I	TTAA	4 cut(s)	750, 798, 1056, 1664
Tru9I	TTAA	4 cut(s)	750, 798, 1056, 1664
TscAI	CASTG	5 cut(s)	723, 1309, 1402, 1475, 2092
TseFI	GTSAC	4 cut(s)	262, 459, 1779, 2087
TseI	GCWGC	4 cut(s)	529, 1691, 2082, 2113
Tsp45I	GTSAC	4 cut(s)	262, 459, 1779, 2087
TspDTI	ATGAA	6 cut(s)	129, 746, 915, 1041, 1538, 1595
TspGWI	ACGGA	3 cut(s)	1062, 1697, 2040
TspMI	CCCGGG	1 cut(s)	632
TspRI	CASTG	5 cut(s)	723, 1309, 1402, 1475, 2092
VpaK11BI	GGWCC	1 cut(s)	1226
VspI	ATTAAT	1 cut(s)	750
XapI	RAATTY	2 cut(s)	238, 1142
XbaI	TCTAGA	1 cut(s)	1021
XcmI	CCANNNNNNNNNTGG	1 cut(s)	918
XhoI	CTCGAG	1 cut(s)	1230
XmaI	CCCGGG	1 cut(s)	632
XmiI	GTMKAC	2 cut(s)	1377, 1841
XmnI	GAANNNNTTC	1 cut(s)	1146
XspI	CTAG	4 cut(s)	438, 600, 828, 1022
Zsp2I	ATGCAT	1 cut(s)	1918

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.