Decapping 5-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G45330 AT5G45330 AT5G45330 |
| fragaria_vesca | FvH4_5g24990 FvH4_5g24990 FvH4_5g24990 FvH4_5g24990 |
| malus_domestica | MD06G1011200.v1.1 MD16G1286000.v1.1 MD16G1286100.v1.1 |
| prunus_persica | Prupe.5G013500_v2.0.a1 Prupe.5G013500_v2.0.a1 Prupe.5G013500_v2.0.a1 Prupe.5G013500_v2.0.a1 |
| pyrus_communis | pycom06g00920 pycom16g25770 |
| rosa_chinensis | RchiOBHm_Chr7g0215271 |
| rosa_laevigata | RLG00000002675 |
| rosa_multiflora | Rmu_sc0007904.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00244350 |
| rosa_rugosa | Rorug07G0151700 Rorug07G0151800 |
| rosa_samantha | Rh7AG288400 Rh7BG280500 Rh7CG308200 Rh7DG292000 |
| rosa_wichuraiana | Rw7G024650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 262, 328 |
| Acc36I | ACCTGC | 3 cut(s) | 262, 328, 947 |
| AccB1I | GGYRCC | 1 cut(s) | 316 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1584 |
| AccIII | TCCGGA | 1 cut(s) | 14 |
| AciI | CCGC | 2 cut(s) | 249, 1280 |
| AclWI | GGATC | 5 cut(s) | 14, 73, 86, 278, 1458 |
| AcoI | YGGCCR | 2 cut(s) | 759, 838 |
| AcsI | RAATTY | 2 cut(s) | 698, 1095 |
| AcuI | CTGAAG | 2 cut(s) | 468, 627 |
| AfaI | GTAC | 2 cut(s) | 59, 1163 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 29, 595, 1249, 1499, 1584 |
| AgsI | TTSAA | 2 cut(s) | 235, 894 |
| AhlI | ACTAGT | 1 cut(s) | 1169 |
| AjiI | CACGTC | 1 cut(s) | 1562 |
| AjnI | CCWGG | 2 cut(s) | 835, 1492 |
| AluBI | AGCT | 3 cut(s) | 623, 647, 1045 |
| AluI | AGCT | 3 cut(s) | 623, 647, 1045 |
| Alw21I | GWGCWC | 1 cut(s) | 38 |
| Alw26I | GTCTC | 3 cut(s) | 249, 558, 1161 |
| AlwI | GGATC | 5 cut(s) | 14, 73, 86, 278, 1458 |
| Aor13HI | TCCGGA | 1 cut(s) | 14 |
| AoxI | GGCC | 5 cut(s) | 115, 163, 537, 759, 838 |
| ApoI | RAATTY | 2 cut(s) | 698, 1095 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 270 |
| AspS9I | GGNCC | 5 cut(s) | 164, 455, 537, 959, 1490 |
| AsuC2I | CCSGG | 1 cut(s) | 313 |
| AsuHPI | GGTGA | 1 cut(s) | 825 |
| AvaII | GGWCC | 3 cut(s) | 455, 959, 1490 |
| BaeGI | GKGCMC | 1 cut(s) | 319 |
| BalI | TGGCCA | 2 cut(s) | 761, 840 |
| BamHI | GGATCC | 1 cut(s) | 78 |
| BanI | GGYRCC | 1 cut(s) | 316 |
| BanII | GRGCYC | 1 cut(s) | 1520 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 868, 900 |
| BauI | CACGAG | 1 cut(s) | 648 |
| BbsI | GAAGAC | 1 cut(s) | 930 |
| Bbv12I | GWGCWC | 1 cut(s) | 38 |
| BbvCI | CCTCAGC | 1 cut(s) | 92 |
| BccI | CCATC | 5 cut(s) | 155, 466, 787, 988, 1475 |
| BciT130I | CCWGG | 2 cut(s) | 837, 1494 |
| BciVI | GTATCC | 1 cut(s) | 379 |
| BclI | TGATCA | 1 cut(s) | 1054 |
| BcnI | CCSGG | 1 cut(s) | 313 |
| BcoDI | GTCTC | 3 cut(s) | 249, 558, 1161 |
| BcuI | ACTAGT | 1 cut(s) | 1169 |
| BfaI | CTAG | 3 cut(s) | 804, 1170, 1199 |
| BfmI | CTRYAG | 2 cut(s) | 576, 618 |
| BfuAI | ACCTGC | 3 cut(s) | 262, 328, 947 |
| BfuI | GTATCC | 1 cut(s) | 379 |
| BmcAI | AGTACT | 1 cut(s) | 1163 |
| Bme1390I | CCNGG | 3 cut(s) | 313, 837, 1494 |
| Bme18I | GGWCC | 3 cut(s) | 455, 959, 1490 |
| BmgBI | CACGTC | 1 cut(s) | 1562 |
| BmgT120I | GGNCC | 5 cut(s) | 164, 455, 537, 959, 1490 |
| BmiI | GGNNCC | 6 cut(s) | 80, 318, 456, 538, 600, 1324 |
| BmrFI | CCNGG | 3 cut(s) | 313, 837, 1494 |
| BmrI | ACTGGG | 1 cut(s) | 565 |
| BmsI | GCATC | 3 cut(s) | 623, 941, 943 |
| BmuI | ACTGGG | 1 cut(s) | 565 |
| BpiI | GAAGAC | 1 cut(s) | 930 |
| BpmI | CTGGAG | 1 cut(s) | 480 |
| Bpu10I | CCTNAGC | 1 cut(s) | 92 |
| BpuEI | CTTGAG | 1 cut(s) | 1107 |
| BpuMI | CCSGG | 1 cut(s) | 313 |
| BsaJI | CCNNGG | 6 cut(s) | 312, 332, 756, 1243, 1387, 1493 |
| BsaWI | WCCGGW | 1 cut(s) | 14 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 29, 595, 1249, 1499, 1584 |
| Bse1I | ACTGG | 4 cut(s) | 571, 851, 899, 1300 |
| BseAI | TCCGGA | 1 cut(s) | 14 |
| BseBI | CCWGG | 2 cut(s) | 837, 1494 |
| BseDI | CCNNGG | 6 cut(s) | 312, 332, 756, 1243, 1387, 1493 |
| BseGI | GGATG | 7 cut(s) | 166, 752, 1231, 1270, 1288, 1315, 1354 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 29, 595, 1249, 1499, 1584 |
| BseMII | CTCAG | 4 cut(s) | 106, 133, 1172, 1407 |
| BseNI | ACTGG | 4 cut(s) | 571, 851, 899, 1300 |
| BseRI | GAGGAG | 2 cut(s) | 483, 1199 |
| BseSI | GKGCMC | 1 cut(s) | 319 |
| BsgI | GTGCAG | 2 cut(s) | 240, 932 |
| BshFI | GGCC | 5 cut(s) | 117, 165, 539, 761, 840 |
| BshNI | GGYRCC | 1 cut(s) | 316 |
| BsiHKAI | GWGCWC | 1 cut(s) | 38 |
| BsiSI | CCGG | 2 cut(s) | 15, 312 |
| BslFI | GGGAC | 1 cut(s) | 1572 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 29, 595, 1249, 1499, 1584 |
| BsmAI | GTCTC | 3 cut(s) | 249, 558, 1161 |
| BsmFI | GGGAC | 1 cut(s) | 1572 |
| BsmI | GAATGC | 2 cut(s) | 466, 805 |
| BsnI | GGCC | 5 cut(s) | 117, 165, 539, 761, 840 |
| Bsp1286I | GDGCHC | 3 cut(s) | 38, 319, 1520 |
| Bsp13I | TCCGGA | 1 cut(s) | 14 |
| Bsp143I | GATC | 6 cut(s) | 19, 78, 283, 1016, 1054, 1463 |
| BspACI | CCGC | 2 cut(s) | 249, 1280 |
| BspANI | GGCC | 5 cut(s) | 117, 165, 539, 761, 840 |
| BspCNI | CTCAG | 4 cut(s) | 105, 132, 1171, 1408 |
| BspEI | TCCGGA | 1 cut(s) | 14 |
| BspLI | GGNNCC | 6 cut(s) | 80, 318, 456, 538, 600, 1324 |
| BspMAI | CTGCAG | 1 cut(s) | 580 |
| BspMI | ACCTGC | 3 cut(s) | 262, 328, 947 |
| BspPI | GGATC | 5 cut(s) | 14, 73, 86, 278, 1458 |
| BspT107I | GGYRCC | 1 cut(s) | 316 |
| BsrI | ACTGG | 4 cut(s) | 571, 851, 899, 1300 |
| BssECI | CCNNGG | 6 cut(s) | 312, 332, 756, 1243, 1387, 1493 |
| BssMI | GATC | 6 cut(s) | 19, 78, 283, 1016, 1054, 1463 |
| BssSI | CACGAG | 1 cut(s) | 648 |
| BssT1I | CCWWGG | 2 cut(s) | 756, 1243 |
| Bst2BI | CACGAG | 1 cut(s) | 648 |
| Bst2UI | CCWGG | 2 cut(s) | 837, 1494 |
| Bst4CI | ACNGT | 7 cut(s) | 300, 336, 1140, 1155, 1289, 1388, 1544 |
| Bst6I | CTCTTC | 1 cut(s) | 736 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 919 |
| BstDEI | CTNAG | 5 cut(s) | 92, 119, 545, 1158, 1416 |
| BstDSI | CCRYGG | 2 cut(s) | 332, 1387 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1247 |
| BstF5I | GGATG | 7 cut(s) | 166, 752, 1231, 1270, 1288, 1315, 1354 |
| BstKTI | GATC | 6 cut(s) | 22, 81, 286, 1019, 1057, 1466 |
| BstMAI | GTCTC | 3 cut(s) | 249, 558, 1161 |
| BstMBI | GATC | 6 cut(s) | 19, 78, 283, 1016, 1054, 1463 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 620, 653, 919 |
| BstNI | CCWGG | 2 cut(s) | 837, 1494 |
| BstNSI | RCATGY | 1 cut(s) | 1576 |
| BstSCI | CCNGG | 3 cut(s) | 311, 835, 1492 |
| BstSFI | CTRYAG | 2 cut(s) | 576, 618 |
| BstSLI | GKGCMC | 1 cut(s) | 319 |
| BstV2I | GAAGAC | 1 cut(s) | 930 |
| BstX2I | RGATCY | 3 cut(s) | 19, 78, 1463 |
| BstYI | RGATCY | 3 cut(s) | 19, 78, 1463 |
| BsuI | GTATCC | 1 cut(s) | 379 |
| BsuRI | GGCC | 5 cut(s) | 117, 165, 539, 761, 840 |
| BtgI | CCRYGG | 2 cut(s) | 332, 1387 |
| BtrI | CACGTC | 1 cut(s) | 1562 |
| BtsCI | GGATG | 7 cut(s) | 166, 752, 1231, 1270, 1288, 1315, 1354 |
| BtsIMutI | CAGTG | 2 cut(s) | 1186, 1294 |
| BveI | ACCTGC | 3 cut(s) | 262, 328, 947 |
| Cfr13I | GGNCC | 5 cut(s) | 164, 455, 537, 959, 1490 |
| CseI | GACGC | 1 cut(s) | 85 |
| Csp6I | GTAC | 2 cut(s) | 58, 1162 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 432, 467 |
| CviAII | CATG | 5 cut(s) | 919, 1204, 1371, 1472, 1573 |
| CviQI | GTAC | 2 cut(s) | 58, 1162 |
| DdeI | CTNAG | 5 cut(s) | 92, 119, 545, 1158, 1416 |
| DpnI | GATC | 6 cut(s) | 21, 80, 285, 1018, 1056, 1465 |
| DpnII | GATC | 6 cut(s) | 19, 78, 283, 1016, 1054, 1463 |
| EaeI | YGGCCR | 2 cut(s) | 759, 838 |
| Eam1104I | CTCTTC | 1 cut(s) | 736 |
| EarI | CTCTTC | 1 cut(s) | 736 |
| EciI | GGCGGA | 1 cut(s) | 1295 |
| Eco130I | CCWWGG | 2 cut(s) | 756, 1243 |
| Eco24I | GRGCYC | 1 cut(s) | 1520 |
| Eco32I | GATATC | 1 cut(s) | 771 |
| Eco47I | GGWCC | 3 cut(s) | 455, 959, 1490 |
| Eco57I | CTGAAG | 2 cut(s) | 468, 627 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1247 |
| EcoO109I | RGGNCCY | 2 cut(s) | 537, 959 |
| EcoRII | CCWGG | 2 cut(s) | 835, 1492 |
| EcoRV | GATATC | 1 cut(s) | 771 |
| EcoT14I | CCWWGG | 2 cut(s) | 756, 1243 |
| EcoT38I | GRGCYC | 1 cut(s) | 1520 |
| ErhI | CCWWGG | 2 cut(s) | 756, 1243 |
| FaeI | CATG | 5 cut(s) | 922, 1207, 1374, 1475, 1576 |
| FaqI | GGGAC | 1 cut(s) | 1572 |
| FatI | CATG | 5 cut(s) | 918, 1203, 1370, 1471, 1572 |
| FauI | CCCGC | 1 cut(s) | 256 |
| FauNDI | CATATG | 1 cut(s) | 136 |
| FbaI | TGATCA | 1 cut(s) | 1054 |
| FokI | GGATG | 7 cut(s) | 173, 739, 1238, 1277, 1295, 1322, 1361 |
| FriOI | GRGCYC | 1 cut(s) | 1520 |
| FspBI | CTAG | 3 cut(s) | 804, 1170, 1199 |
| GsuI | CTGGAG | 1 cut(s) | 480 |
| HaeIII | GGCC | 5 cut(s) | 117, 165, 539, 761, 840 |
| HapII | CCGG | 2 cut(s) | 15, 312 |
| HgaI | GACGC | 1 cut(s) | 85 |
| Hin1II | CATG | 5 cut(s) | 922, 1207, 1374, 1475, 1576 |
| HincII | GTYRAC | 1 cut(s) | 809 |
| HindII | GTYRAC | 1 cut(s) | 809 |
| HinfI | GANTC | 4 cut(s) | 11, 104, 271, 890 |
| HpaII | CCGG | 2 cut(s) | 15, 312 |
| HphI | GGTGA | 1 cut(s) | 825 |
| Hpy166II | GTNNAC | 2 cut(s) | 724, 809 |
| Hpy188I | TCNGA | 7 cut(s) | 10, 122, 367, 889, 952, 1059, 1417 |
| Hpy188III | TCNNGA | 7 cut(s) | 15, 31, 602, 740, 995, 1052, 1530 |
| Hpy8I | GTNNAC | 2 cut(s) | 724, 809 |
| HpyAV | CCTTC | 8 cut(s) | 68, 151, 438, 759, 1216, 1270, 1313, 1527 |
| HpyCH4III | ACNGT | 7 cut(s) | 300, 336, 1140, 1155, 1289, 1388, 1544 |
| HpyCH4IV | ACGT | 2 cut(s) | 87, 1561 |
| HpyCH4V | TGCA | 9 cut(s) | 257, 323, 578, 662, 913, 932, 956, 1039, 1337 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 620, 653, 919 |
| HpyF3I | CTNAG | 5 cut(s) | 92, 119, 545, 1158, 1416 |
| HpySE526I | ACGT | 2 cut(s) | 87, 1561 |
| Hsp92II | CATG | 5 cut(s) | 922, 1207, 1374, 1475, 1576 |
| Kpn2I | TCCGGA | 1 cut(s) | 14 |
| Ksp22I | TGATCA | 1 cut(s) | 1054 |
| Kzo9I | GATC | 6 cut(s) | 19, 78, 283, 1016, 1054, 1463 |
| LmnI | GCTCC | 3 cut(s) | 33, 604, 1391 |
| LweI | GCATC | 3 cut(s) | 623, 941, 943 |
| MaeI | CTAG | 3 cut(s) | 804, 1170, 1199 |
| MaeII | ACGT | 2 cut(s) | 87, 1561 |
| MaeIII | GTNAC | 7 cut(s) | 68, 300, 423, 1117, 1134, 1538, 1568 |
| MalI | GATC | 6 cut(s) | 21, 80, 285, 1018, 1056, 1465 |
| MboI | GATC | 6 cut(s) | 19, 78, 283, 1016, 1054, 1463 |
| MboII | GAAGA | 6 cut(s) | 663, 723, 896, 930, 1072, 1092 |
| MfeI | CAATTG | 2 cut(s) | 180, 1001 |
| MflI | RGATCY | 3 cut(s) | 19, 78, 1463 |
| MhlI | GDGCHC | 3 cut(s) | 38, 319, 1520 |
| MlsI | TGGCCA | 2 cut(s) | 761, 840 |
| MluCI | AATT | 9 cut(s) | 180, 483, 698, 1001, 1095, 1365, 1375, 1450, 1507 |
| MluNI | TGGCCA | 2 cut(s) | 761, 840 |
| MlyI | GAGTC | 1 cut(s) | 98 |
| Mox20I | TGGCCA | 2 cut(s) | 761, 840 |
| MroI | TCCGGA | 1 cut(s) | 14 |
| MroXI | GAANNNNTTC | 1 cut(s) | 270 |
| MscI | TGGCCA | 2 cut(s) | 761, 840 |
| MseI | TTAA | 4 cut(s) | 129, 225, 240, 1218 |
| MslI | CAYNNNNRTG | 2 cut(s) | 279, 1476 |
| Msp20I | TGGCCA | 2 cut(s) | 761, 840 |
| MspI | CCGG | 2 cut(s) | 15, 312 |
| MspR9I | CCNGG | 3 cut(s) | 313, 837, 1494 |
| MunI | CAATTG | 2 cut(s) | 180, 1001 |
| Mva1269I | GAATGC | 2 cut(s) | 466, 805 |
| MvaI | CCWGG | 2 cut(s) | 837, 1494 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 620, 653, 919 |
| NciI | CCSGG | 1 cut(s) | 313 |
| NdeI | CATATG | 1 cut(s) | 136 |
| NdeII | GATC | 6 cut(s) | 19, 78, 283, 1016, 1054, 1463 |
| NlaIII | CATG | 5 cut(s) | 922, 1207, 1374, 1475, 1576 |
| NlaIV | GGNNCC | 6 cut(s) | 80, 318, 456, 538, 600, 1324 |
| NmuCI | GTSAC | 2 cut(s) | 300, 1117 |
| NspI | RCATGY | 1 cut(s) | 1576 |
| PaqCI | CACCTGC | 2 cut(s) | 262, 328 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 93 |
| PctI | GAATGC | 2 cut(s) | 466, 805 |
| PdmI | GAANNNNTTC | 1 cut(s) | 270 |
| PfeI | GAWTC | 3 cut(s) | 11, 271, 890 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1584 |
| PleI | GAGTC | 1 cut(s) | 98 |
| PpsI | GAGTC | 1 cut(s) | 98 |
| PpuMI | RGGWCCY | 1 cut(s) | 959 |
| Psp5II | RGGWCCY | 1 cut(s) | 959 |
| Psp6I | CCWGG | 2 cut(s) | 835, 1492 |
| PspGI | CCWGG | 2 cut(s) | 835, 1492 |
| PspN4I | GGNNCC | 6 cut(s) | 80, 318, 456, 538, 600, 1324 |
| PspPI | GGNCC | 5 cut(s) | 164, 455, 537, 959, 1490 |
| PspPPI | RGGWCCY | 1 cut(s) | 959 |
| PstI | CTGCAG | 1 cut(s) | 580 |
| PsuI | RGATCY | 3 cut(s) | 19, 78, 1463 |
| RsaI | GTAC | 2 cut(s) | 59, 1163 |
| RsaNI | GTAC | 2 cut(s) | 58, 1162 |
| RseI | CAYNNNNRTG | 2 cut(s) | 279, 1476 |
| SaqAI | TTAA | 4 cut(s) | 129, 225, 240, 1218 |
| Sau3AI | GATC | 6 cut(s) | 19, 78, 283, 1016, 1054, 1463 |
| Sau96I | GGNCC | 5 cut(s) | 164, 455, 537, 959, 1490 |
| ScaI | AGTACT | 1 cut(s) | 1163 |
| SchI | GAGTC | 1 cut(s) | 98 |
| ScrFI | CCNGG | 3 cut(s) | 313, 837, 1494 |
| SduI | GDGCHC | 3 cut(s) | 38, 319, 1520 |
| SfaNI | GCATC | 3 cut(s) | 623, 941, 943 |
| SfcI | CTRYAG | 2 cut(s) | 576, 618 |
| SinI | GGWCC | 3 cut(s) | 455, 959, 1490 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 279, 1476 |
| SmlI | CTYRAG | 1 cut(s) | 1122 |
| SmoI | CTYRAG | 1 cut(s) | 1122 |
| SpeI | ACTAGT | 1 cut(s) | 1169 |
| Sse9I | AATT | 9 cut(s) | 180, 483, 698, 1001, 1095, 1365, 1375, 1450, 1507 |
| SsiI | CCGC | 2 cut(s) | 249, 1280 |
| SspI | AATATT | 1 cut(s) | 869 |
| SspMI | CTAG | 3 cut(s) | 804, 1170, 1199 |
| StyD4I | CCNGG | 3 cut(s) | 311, 835, 1492 |
| StyI | CCWWGG | 2 cut(s) | 756, 1243 |
| TaaI | ACNGT | 7 cut(s) | 300, 336, 1140, 1155, 1289, 1388, 1544 |
| TaiI | ACGT | 2 cut(s) | 90, 1564 |
| TaqI | TCGA | 1 cut(s) | 1166 |
| TasI | AATT | 9 cut(s) | 180, 483, 698, 1001, 1095, 1365, 1375, 1450, 1507 |
| TatI | WGTACW | 1 cut(s) | 1161 |
| TfiI | GAWTC | 3 cut(s) | 11, 271, 890 |
| Tru1I | TTAA | 4 cut(s) | 129, 225, 240, 1218 |
| Tru9I | TTAA | 4 cut(s) | 129, 225, 240, 1218 |
| TscAI | CASTG | 2 cut(s) | 1186, 1294 |
| TseFI | GTSAC | 2 cut(s) | 300, 1117 |
| Tsp45I | GTSAC | 2 cut(s) | 300, 1117 |
| TspDTI | ATGAA | 7 cut(s) | 420, 741, 1220, 1242, 1281, 1326, 1359 |
| TspGWI | ACGGA | 3 cut(s) | 56, 1096, 1416 |
| TspRI | CASTG | 2 cut(s) | 1186, 1294 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1584 |
| VpaK11BI | GGWCC | 3 cut(s) | 455, 959, 1490 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1247 |
| XapI | RAATTY | 2 cut(s) | 698, 1095 |
| XceI | RCATGY | 1 cut(s) | 1576 |
| XmnI | GAANNNNTTC | 1 cut(s) | 270 |
| XspI | CTAG | 3 cut(s) | 804, 1170, 1199 |
| ZrmI | AGTACT | 1 cut(s) | 1163 |