Prupe.5G013500_v2.0.a1

Decapping 5-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
1455012 .. 1462544
7533 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G013500.4

Sequence Viewer

Length: 1632 bp
ATGGCGACTGAATCAGCAGATTCGTACATTGGGAGCCTCATCAGCCTAATTTCCAAGTACGAAATACGTTACGAAGGTGTTCTCTACTTCCTCAGCGTCCAAGACTCCTCCATTGGCCTAAAAAACGTTAGGTCATATGGAACAGAGGGGCGTAAGAAGGATGGCCCACAAGTTCCTCCAAATGATAAGGTTTATGAATATATTCTGTTTAGAGCAAGTGACATTAAGGATTTGCAAGTTAAGTCTCATCCGCCTGCTCAAAGAGAAGAACAAACTCACGATGATCCTGCTATTATACAGTCACACTATGCTGGGGTGCCTGTAAGTTCTCCAGCATCAGCATTAGTTGGAGGTAAAAATTTGGTAGAAACAACTCATTGGCAGGATACCCCTGCTTTGACTAGTAGAGGCCATATTGGTGTATTGCCTTCATATAATTCTGCAATTGAAGTTGGTACATCAGGACATTCCTCTTATACTCATATTGCTAGTCCTCCAGCACTTTCTTTTCCGATGTATTGGCAAGGATACAATGGGGCATCACTTGATATGTCTGATCATCCACATCACCGTATTCCTTTGCAATCTCCATCTGCTGTGTCACAGCCCTTGACAATGCAGAATAAGGCTCCTGAAAATCACGCATCTATCGCTGTTGGCTTGGCCACTACATCAGAATCTCCGAACCCTATAATTTCATCTTCTACACCAGCTTTTGTACATCCAAACTTTTCTACCTCTGTCCCTTCTGTACATTTTTCTTCCGGTCTTGATATGCCTACGTCCATGGCTGCACAGGTATCTTTACCATCTCATTCTATACCTCTAAATGCTAGCCGACTAACTATGTCTTCGTTGCCTTCACCCTGCCAAGACTTAGACATAATTGAAACACAAATTGCTACTAAAGCTGTTTCTGATTCAGTACCTGTTCTACCTGCACAGTCCATGCCTTATCCTGGATCGTTTTCTGTGGGTTCTGATCGAGGTCCCTTGCTAACACCACCCCCATCTTTGTTAACTCCTGATCAATTGGCACCATCTAGATCGCACATACTTTCTTCCTCACAGAAACTCTACCTTGATGGAAAGGATATGGGCATTTTGATGCCAACCTCATCTGGATCTTCATCCTTGATTCCTCCTGTAACTCGAGCACCATTATTGCCATTGCCTACTTCCCAACAGTCTCCATACTCAGCTACACCGTATACTGAGGAGTTTGATTTTCTAGCCATGAATGAGAAGTTTAAGAAAGATGAAGTATGGGGTTACCTAGGAAAGGAAAAACAAAGTGACCAAACAGAAAGAGTGGATAATAGTGGAACTGGTCAATGTGTGGATGACAAAGAAGGTTCTGGCCTGATACCCAACACAAAGCCTGCGTATAACAAGGATGAGTTTTTTGACACAATTTCATGTAATTCGCTCAACCGTGGAGGAAGAAATGGACATAGGTTTTCTGAGAGAATGAGGCAGGATACTGAGACATTTGGAAATTTCCAGCAGAGATATAATCTTGCCTATGGTGGTTATGGTGCTGGACGTGGTGGTAATTACCGGGGTCCATATCAATGGGGAAGGGGATATGGCTACGGCGGGAGGGGACGTGGTGGTAACATGCCCTTCTAA

Protein Analysis

544

Amino Acids

58.76

Weight (kDa)

6.15

Isoelectric Point (pI)

53.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 946
AccB1I GGYRCC 2 cut(s) 316, 1036
AccI GTMKAC 1 cut(s) 1211
AciI CCGC 2 cut(s) 251, 1599
AclI AACGTT 1 cut(s) 126
AclWI GGATC 3 cut(s) 278, 970, 1132
AcoI YGGCCR 1 cut(s) 663
AcsI RAATTY 2 cut(s) 358, 1498
AfaI GTAC 6 cut(s) 26, 59, 457, 720, 753, 927
AfiI CCNNNNNNNGG 2 cut(s) 959, 1282
AgsI TTSAA 2 cut(s) 449, 890
AhlI ACTAGT 1 cut(s) 401
AjiI CACGTC 2 cut(s) 1547, 1610
AjnI CCWGG 1 cut(s) 958
AluBI AGCT 3 cut(s) 713, 911, 1202
AluI AGCT 3 cut(s) 713, 911, 1202
Alw21I GWGCWC 1 cut(s) 1159
Alw26I GTCTC 3 cut(s) 249, 1194, 1481
AlwI GGATC 3 cut(s) 278, 970, 1132
AlwNI CAGNNNCTG 1 cut(s) 929
Ama87I CYCGRG 1 cut(s) 1152
AoxI GGCC 5 cut(s) 115, 163, 409, 663, 1360
ApeKI GCWGC 1 cut(s) 791
ApoI RAATTY 2 cut(s) 358, 1498
Asp700I GAANNNNTTC 2 cut(s) 78, 201
AspA2I CCTAGG 1 cut(s) 1276
AspS9I GGNCC 3 cut(s) 164, 989, 1565
AsuC2I CCSGG 1 cut(s) 1562
AsuHPI GGTGA 2 cut(s) 560, 855
AsuNHI GCTAGC 1 cut(s) 833
AvaI CYCGRG 1 cut(s) 1152
AvaII GGWCC 2 cut(s) 989, 1565
AvrII CCTAGG 1 cut(s) 1276
BalI TGGCCA 1 cut(s) 665
BanI GGYRCC 2 cut(s) 316, 1036
BbsI GAAGAC 1 cut(s) 843
Bbv12I GWGCWC 1 cut(s) 1159
BbvCI CCTCAGC 1 cut(s) 92
BbvI GCAGC 1 cut(s) 778
BccI CCATC 6 cut(s) 155, 598, 817, 1018, 1048, 1079
BceAI ACGGC 1 cut(s) 1612
BcgI CGANNNNNNTGC 2 cut(s) 269, 303
BciT130I CCWGG 1 cut(s) 960
BciVI GTATCC 3 cut(s) 379, 521, 1474
BclI TGATCA 2 cut(s) 556, 1027
BcnI CCSGG 1 cut(s) 1562
BcoDI GTCTC 3 cut(s) 249, 1194, 1481
BcuI ACTAGT 1 cut(s) 401
BfaI CTAG 6 cut(s) 402, 489, 834, 1044, 1232, 1277
BfuAI ACCTGC 1 cut(s) 946
BfuI GTATCC 3 cut(s) 379, 521, 1474
BisI GCNGC 1 cut(s) 792
BlnI CCTAGG 1 cut(s) 1276
BlsI GCNGC 1 cut(s) 793
Bme1390I CCNGG 2 cut(s) 960, 1562
Bme18I GGWCC 2 cut(s) 989, 1565
BmeT110I CYCGRG 1 cut(s) 1152
BmgBI CACGTC 2 cut(s) 1547, 1610
BmgT120I GGNCC 3 cut(s) 164, 989, 1565
BmiI GGNNCC 6 cut(s) 35, 318, 630, 991, 1038, 1566
BmrFI CCNGG 2 cut(s) 960, 1562
BmsI GCATC 4 cut(s) 344, 548, 653, 1098
BmtI GCTAGC 1 cut(s) 837
BpiI GAAGAC 1 cut(s) 843
BpmI CTGGAG 2 cut(s) 315, 480
Bpu10I CCTNAGC 1 cut(s) 92
BpuMI CCSGG 1 cut(s) 1562
BsaBI GATNNNNATC 1 cut(s) 1129
BsaJI CCNNGG 4 cut(s) 786, 1276, 1435, 1561
BsaWI WCCGGW 1 cut(s) 764
BsaXI ACNNNNNCTCC 2 cut(s) 1594, 1624
Bsc4I CCNNNNNNNGG 2 cut(s) 959, 1282
Bse1I ACTGG 1 cut(s) 1333
Bse3DI GCAATG 1 cut(s) 1169
Bse8I GATNNNNATC 1 cut(s) 1129
BseBI CCWGG 1 cut(s) 960
BseDI CCNNGG 4 cut(s) 786, 1276, 1435, 1561
BseGI GGATG 7 cut(s) 166, 247, 559, 721, 1130, 1348, 1402
BseJI GATNNNNATC 1 cut(s) 1129
BseLI CCNNNNNNNGG 2 cut(s) 959, 1282
BseMI GCAATG 1 cut(s) 1169
BseMII CTCAG 5 cut(s) 106, 1206, 1212, 1455, 1476
BseNI ACTGG 1 cut(s) 1333
BseRI GAGGAG 2 cut(s) 97, 1232
BseXI GCAGC 1 cut(s) 778
BseYI CCCAGC 1 cut(s) 311
BsgI GTGCAG 2 cut(s) 777, 924
BshFI GGCC 5 cut(s) 117, 165, 411, 665, 1362
BshNI GGYRCC 2 cut(s) 316, 1036
BsiHKAI GWGCWC 1 cut(s) 1159
BsiHKCI CYCGRG 1 cut(s) 1152
BsiSI CCGG 2 cut(s) 765, 1561
BslFI GGGAC 3 cut(s) 728, 975, 1620
BslI CCNNNNNNNGG 2 cut(s) 959, 1282
BsmAI GTCTC 3 cut(s) 249, 1194, 1481
BsmFI GGGAC 3 cut(s) 728, 975, 1620
BsnI GGCC 5 cut(s) 117, 165, 411, 665, 1362
BsoBI CYCGRG 1 cut(s) 1152
Bsp1286I GDGCHC 1 cut(s) 1159
Bsp1407I TGTACA 2 cut(s) 718, 751
Bsp143I GATC 7 cut(s) 283, 556, 962, 982, 1027, 1046, 1124
Bsp19I CCATGG 1 cut(s) 786
BspACI CCGC 2 cut(s) 251, 1599
BspANI GGCC 5 cut(s) 117, 165, 411, 665, 1362
BspCNI CTCAG 5 cut(s) 105, 1207, 1211, 1456, 1477
BspLI GGNNCC 6 cut(s) 35, 318, 630, 991, 1038, 1566
BspMI ACCTGC 1 cut(s) 946
BspOI GCTAGC 1 cut(s) 837
BspPI GGATC 3 cut(s) 278, 970, 1132
BspT107I GGYRCC 2 cut(s) 316, 1036
BsrDI GCAATG 1 cut(s) 1169
BsrGI TGTACA 2 cut(s) 718, 751
BsrI ACTGG 1 cut(s) 1333
BssECI CCNNGG 4 cut(s) 786, 1276, 1435, 1561
BssMI GATC 7 cut(s) 283, 556, 962, 982, 1027, 1046, 1124
BssNAI GTATAC 1 cut(s) 1212
BssT1I CCWWGG 2 cut(s) 786, 1276
Bst1107I GTATAC 1 cut(s) 1212
Bst2UI CCWGG 1 cut(s) 960
Bst4CI ACNGT 6 cut(s) 300, 572, 945, 1188, 1209, 1436
BstAUI TGTACA 2 cut(s) 718, 751
BstC8I GCNNGC 3 cut(s) 255, 835, 1383
BstDEI CTNAG 6 cut(s) 92, 877, 1198, 1215, 1464, 1485
BstDSI CCRYGG 2 cut(s) 786, 1435
BstEII GGTNACC 1 cut(s) 1271
BstENI CCTNNNNNAGG 1 cut(s) 1280
BstF5I GGATG 7 cut(s) 166, 247, 559, 721, 1130, 1348, 1402
BstKTI GATC 7 cut(s) 286, 559, 965, 985, 1030, 1049, 1127
BstMAI GTCTC 3 cut(s) 249, 1194, 1481
BstMBI GATC 7 cut(s) 283, 556, 962, 982, 1027, 1046, 1124
BstMWI GCNNNNNNNGC 3 cut(s) 42, 650, 908
BstNI CCWGG 1 cut(s) 960
BstNSI RCATGY 1 cut(s) 1624
BstPI GGTNACC 1 cut(s) 1271
BstSCI CCNGG 2 cut(s) 958, 1560
BstV1I GCAGC 1 cut(s) 778
BstV2I GAAGAC 1 cut(s) 843
BstX2I RGATCY 1 cut(s) 1124
BstXI CCANNNNNNTGG 1 cut(s) 1575
BstYI RGATCY 1 cut(s) 1124
BstZ17I GTATAC 1 cut(s) 1212
BsuI GTATCC 3 cut(s) 379, 521, 1474
BsuRI GGCC 5 cut(s) 117, 165, 411, 665, 1362
BtgI CCRYGG 2 cut(s) 786, 1435
BtrI CACGTC 2 cut(s) 1547, 1610
BtsCI GGATG 7 cut(s) 166, 247, 559, 721, 1130, 1348, 1402
BveI ACCTGC 1 cut(s) 946
Cac8I GCNNGC 3 cut(s) 255, 835, 1383
CaiI CAGNNNCTG 1 cut(s) 929
Cfr13I GGNCC 3 cut(s) 164, 989, 1565
CseI GACGC 1 cut(s) 85
Csp6I GTAC 6 cut(s) 25, 58, 456, 719, 752, 926
CviAII CATG 5 cut(s) 787, 949, 1237, 1419, 1621
CviQI GTAC 6 cut(s) 25, 58, 456, 719, 752, 926
DdeI CTNAG 6 cut(s) 92, 877, 1198, 1215, 1464, 1485
DpnI GATC 7 cut(s) 285, 558, 964, 984, 1029, 1048, 1126
DpnII GATC 7 cut(s) 283, 556, 962, 982, 1027, 1046, 1124
EaeI YGGCCR 1 cut(s) 663
EciI GGCGGA 1 cut(s) 240
Eco130I CCWWGG 2 cut(s) 786, 1276
Eco47I GGWCC 2 cut(s) 989, 1565
Eco88I CYCGRG 1 cut(s) 1152
Eco91I GGTNACC 1 cut(s) 1271
EcoNI CCTNNNNNAGG 1 cut(s) 1280
EcoO109I RGGNCCY 1 cut(s) 989
EcoO65I GGTNACC 1 cut(s) 1271
EcoRII CCWGG 1 cut(s) 958
EcoT14I CCWWGG 2 cut(s) 786, 1276
ErhI CCWWGG 2 cut(s) 786, 1276
FaeI CATG 5 cut(s) 790, 952, 1240, 1422, 1624
FaqI GGGAC 3 cut(s) 728, 975, 1620
FatI CATG 5 cut(s) 786, 948, 1236, 1418, 1620
FauI CCCGC 1 cut(s) 1592
FauNDI CATATG 1 cut(s) 136
FbaI TGATCA 2 cut(s) 556, 1027
FblI GTMKAC 1 cut(s) 1211
Fnu4HI GCNGC 1 cut(s) 792
FokI GGATG 7 cut(s) 173, 234, 546, 708, 1117, 1355, 1409
Fsp4HI GCNGC 1 cut(s) 792
FspBI CTAG 6 cut(s) 402, 489, 834, 1044, 1232, 1277
GluI GCNGC 1 cut(s) 792
GsaI CCCAGC 1 cut(s) 315
GsuI CTGGAG 2 cut(s) 315, 480
HaeIII GGCC 5 cut(s) 117, 165, 411, 665, 1362
HapII CCGG 2 cut(s) 765, 1561
HgaI GACGC 1 cut(s) 85
Hin1II CATG 5 cut(s) 790, 952, 1240, 1422, 1624
HincII GTYRAC 1 cut(s) 1020
HindII GTYRAC 1 cut(s) 1020
HinfI GANTC 6 cut(s) 11, 20, 104, 677, 920, 1138
HpaI GTTAAC 1 cut(s) 1020
HpaII CCGG 2 cut(s) 765, 1561
HphI GGTGA 2 cut(s) 560, 855
Hpy166II GTNNAC 2 cut(s) 1020, 1212
Hpy188I TCNGA 7 cut(s) 513, 556, 676, 684, 919, 982, 1465
Hpy188III TCNNGA 7 cut(s) 278, 462, 632, 770, 1025, 1044, 1122
Hpy8I GTNNAC 2 cut(s) 1020, 1212
HpyAV CCTTC 7 cut(s) 68, 151, 438, 756, 870, 1346, 1575
HpyCH4III ACNGT 6 cut(s) 300, 572, 945, 1188, 1209, 1436
HpyCH4IV ACGT 5 cut(s) 67, 126, 782, 1546, 1609
HpyCH4V TGCA 6 cut(s) 235, 443, 583, 619, 794, 941
HpyF10VI GCNNNNNNNGC 3 cut(s) 42, 650, 908
HpyF3I CTNAG 6 cut(s) 92, 877, 1198, 1215, 1464, 1485
HpySE526I ACGT 5 cut(s) 67, 126, 782, 1546, 1609
Hsp92II CATG 5 cut(s) 790, 952, 1240, 1422, 1624
Ksp22I TGATCA 2 cut(s) 556, 1027
KspAI GTTAAC 1 cut(s) 1020
Kzo9I GATC 7 cut(s) 283, 556, 962, 982, 1027, 1046, 1124
LmnI GCTCC 2 cut(s) 33, 634
Lsp1109I GCAGC 1 cut(s) 778
LweI GCATC 4 cut(s) 344, 548, 653, 1098
MaeI CTAG 6 cut(s) 402, 489, 834, 1044, 1232, 1277
MaeII ACGT 5 cut(s) 67, 126, 782, 1546, 1609
MaeIII GTNAC 8 cut(s) 68, 218, 300, 600, 1147, 1271, 1295, 1616
MalI GATC 7 cut(s) 285, 558, 964, 984, 1029, 1048, 1126
MboI GATC 7 cut(s) 283, 556, 962, 982, 1027, 1046, 1124
MboII GAAGA 7 cut(s) 278, 693, 753, 843, 1053, 1119, 1455
MfeI CAATTG 2 cut(s) 444, 1031
MflI RGATCY 1 cut(s) 1124
MhlI GDGCHC 1 cut(s) 1159
MlsI TGGCCA 1 cut(s) 665
MluNI TGGCCA 1 cut(s) 665
MlyI GAGTC 1 cut(s) 98
MmeI TCCRAC 1 cut(s) 328
Mox20I TGGCCA 1 cut(s) 665
MroXI GAANNNNTTC 2 cut(s) 78, 201
MscI TGGCCA 1 cut(s) 665
MseI TTAA 4 cut(s) 225, 240, 1019, 1251
MslI CAYNNNNRTG 3 cut(s) 417, 1106, 1573
Msp20I TGGCCA 1 cut(s) 665
MspI CCGG 2 cut(s) 765, 1561
MspR9I CCNGG 2 cut(s) 960, 1562
MunI CAATTG 2 cut(s) 444, 1031
MvaI CCWGG 1 cut(s) 960
MwoI GCNNNNNNNGC 3 cut(s) 42, 650, 908
NciI CCSGG 1 cut(s) 1562
NcoI CCATGG 1 cut(s) 786
NdeI CATATG 1 cut(s) 136
NdeII GATC 7 cut(s) 283, 556, 962, 982, 1027, 1046, 1124
NheI GCTAGC 1 cut(s) 833
NlaIII CATG 5 cut(s) 790, 952, 1240, 1422, 1624
NlaIV GGNNCC 6 cut(s) 35, 318, 630, 991, 1038, 1566
NmuCI GTSAC 4 cut(s) 218, 300, 600, 1295
NspI RCATGY 1 cut(s) 1624
PaeR7I CTCGAG 1 cut(s) 1152
PdmI GAANNNNTTC 2 cut(s) 78, 201
PfeI GAWTC 5 cut(s) 11, 20, 677, 920, 1138
PfoI TCCNGGA 1 cut(s) 958
PkrI GCNGC 1 cut(s) 793
PleI GAGTC 1 cut(s) 98
PpsI GAGTC 1 cut(s) 98
PpuMI RGGWCCY 1 cut(s) 989
Psp1406I AACGTT 1 cut(s) 126
Psp5II RGGWCCY 1 cut(s) 989
Psp6I CCWGG 1 cut(s) 958
PspEI GGTNACC 1 cut(s) 1271
PspFI CCCAGC 1 cut(s) 311
PspGI CCWGG 1 cut(s) 958
PspN4I GGNNCC 6 cut(s) 35, 318, 630, 991, 1038, 1566
PspPI GGNCC 3 cut(s) 164, 989, 1565
PspPPI RGGWCCY 1 cut(s) 989
PspXI VCTCGAGB 1 cut(s) 1152
PstNI CAGNNNCTG 1 cut(s) 929
PsuI RGATCY 1 cut(s) 1124
RsaI GTAC 6 cut(s) 26, 59, 457, 720, 753, 927
RsaNI GTAC 6 cut(s) 25, 58, 456, 719, 752, 926
RseI CAYNNNNRTG 3 cut(s) 417, 1106, 1573
SaqAI TTAA 4 cut(s) 225, 240, 1019, 1251
SatI GCNGC 1 cut(s) 792
Sau3AI GATC 7 cut(s) 283, 556, 962, 982, 1027, 1046, 1124
Sau96I GGNCC 3 cut(s) 164, 989, 1565
SchI GAGTC 1 cut(s) 98
ScrFI CCNGG 2 cut(s) 960, 1562
SduI GDGCHC 1 cut(s) 1159
SfaNI GCATC 4 cut(s) 344, 548, 653, 1098
Sfr274I CTCGAG 1 cut(s) 1152
SinI GGWCC 2 cut(s) 989, 1565
SlaI CTCGAG 1 cut(s) 1152
SmiMI CAYNNNNRTG 3 cut(s) 417, 1106, 1573
SmlI CTYRAG 1 cut(s) 1152
SmoI CTYRAG 1 cut(s) 1152
SpeI ACTAGT 1 cut(s) 401
SsiI CCGC 2 cut(s) 251, 1599
SspMI CTAG 6 cut(s) 402, 489, 834, 1044, 1232, 1277
StyD4I CCNGG 2 cut(s) 958, 1560
StyI CCWWGG 2 cut(s) 786, 1276
TaaI ACNGT 6 cut(s) 300, 572, 945, 1188, 1209, 1436
TaiI ACGT 5 cut(s) 70, 129, 785, 1549, 1612
TaqI TCGA 2 cut(s) 985, 1153
TatI WGTACW 2 cut(s) 718, 751
TfiI GAWTC 5 cut(s) 11, 20, 677, 920, 1138
Tru1I TTAA 4 cut(s) 225, 240, 1019, 1251
Tru9I TTAA 4 cut(s) 225, 240, 1019, 1251
TseFI GTSAC 4 cut(s) 218, 300, 600, 1295
TseI GCWGC 1 cut(s) 791
Tsp45I GTSAC 4 cut(s) 218, 300, 600, 1295
TspDTI ATGAA 7 cut(s) 210, 420, 687, 1119, 1253, 1275, 1407
VpaK11BI GGWCC 2 cut(s) 989, 1565
XagI CCTNNNNNAGG 1 cut(s) 1280
XapI RAATTY 2 cut(s) 358, 1498
XbaI TCTAGA 1 cut(s) 1043
XceI RCATGY 1 cut(s) 1624
XhoI CTCGAG 1 cut(s) 1152
XmaJI CCTAGG 1 cut(s) 1276
XmiI GTMKAC 1 cut(s) 1211
XmnI GAANNNNTTC 2 cut(s) 78, 201
XspI CTAG 6 cut(s) 402, 489, 834, 1044, 1232, 1277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.