Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0006296

Physical Location & Seq

Genomic Coordinates Forward (+)

12037263 .. 12038879

Gene Structure 1617 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0151700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGACAACTAAATTCTTTCTGCTGTCGTTTTCCCTCTTGATCACCGCAGCTGCTGGCGCCGGCGGCCGATGGCAGGTATTGCAGAAAAGTATTGGGGTTTCAGCCATGCACATGCAGCTGCTGCGCAACGACCGAGTCATCATGTTCGACCGAACGAATTTCGGAAAATCAAATTTGTCGCTGCCGAGGGGAATCTGCCGGAGGAACCCGAATGACACCGCGTTGAAGGTCGACTGTACCGCACATTCGGTCGAGTACGACGTCGCGAGTAACTCTTTCCGACCGCTCATGCTGTTTACCGACTCCTGGTGCTCCTCTGGGTCAGTCAGCCCCAACGGCAGTCTCGTTCAGACTGGAGGGTGGAAGGATGGCCAGATAAGGGTGAGACTGTTTGAGCCATGCAGCACTTGTGATTGGGTGGAGATTGAGAGTGCGCTGACCCACCCAAGGTGGTATGCCACAAATCACATCCTGCCAGATGGCAGGATTATAATCGTTGGCGGACGCGCGCAACCAAACTTTGAATTTTTTCCGAAGATCAAGGAGGGGGAAGGCTCCATCACTGTGCCTTTCCTTGACGAAACGAAGGACGCCGTAGAGGACAATCTGTACCCTTTTGTTTTCCTCAACGTTGATGGCAATTTATTCATATATGCCAACAATCGAGCAATTCTTCTGAACTACGTTACCGGAGAAACTGTGAAGACTTATCCCACAATAACGGGTGGCGATCCGAGATCATACCCGAGCACCGGTTCGGCGGTCTTGCTCCCTTTGAAGGTTCAAAACGGTACTGCAGAGGAGGCGCAAGTTCTTGTCTGCGGCGGAGCTCCGTTAGGGTCTTACAATAAGGCTATCAACAAAGGAATTTTCTTGGATGCCTTGAACACTTGCGCTCGGATGACCATAACAGATCCCAATCCTCGGTGGACTTTGGAGACCATGCCTGGCCCTCGAGTCATGGCGGACATGACTTTGTTGCCTGACGGAAATGTTCTCATAATCAATGGGGCATCGCAAGGCTCAGCAGGCTGGGACTTGGGCCGAGGGCCGGTTTTAAACCCGGTTCTTTACAAAACGGAAAATCCCGCCGGTACTCGCTTTGAGACCATGAATCCAACGTCCATCCCACGCATGTACCACTCAACCGCTGTTCTCTTACGTGACGGTCGCGTGTTGGTCGGTGGGAGCAATCCACACAAAGGATATGAGTTTTCCTCCGTGCTCTTCCCAACGGAACTTTCCGTGGAAGCATTTTATCCAGAATATCTCAATGCTGAATTCTCCGATGTTCGTCCCACCGTCCGTGCACCCAAATCCCAACAAGTTGTTGGCTACGGGCAAAAGGTGCAGATTGAATTTTCTATATCCGGGAAACTAGCCGCGCAGTCCTTGTTCGCATCGATGATTTCTCCATCGTTTTCAACCCACTCGTTCTCCATGAACCAACGCTCACTACTTCTCCCCATCGACAATGTCGTATCAGCTCGTAATCTGACATTTCAAGCGCAGCTCACCATGCCAAGTGATCCTAACCTGGCTCCCTCGTCGTATTATCTGCTCTTTGTTGTTCATCAAAACATACCTAGTGAGGCCACTTGGATCCGCATTGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0000956 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010603 GO:0010605 GO:0010606 GO:0010608 GO:0010629 GO:0010638 GO:0016070 GO:0016071 GO:0017148 GO:0019222 GO:0019439 GO:0031086 GO:0031087 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031334 GO:0032268 GO:0032269 GO:0032991 GO:0033043 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:1901360 GO:1901361 GO:1901575 GO:1902115 GO:1902117 GO:1990904 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FDF LSM14

Protein Analysis

538

Amino Acids

59.06

Weight (kDa)

7.08

Isoelectric Point (pI)

37.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyoxal_oxid_N	PF07250	36 - 423	4.2e-180	Glyoxal oxidase N-terminus
GO-like_E_set	PF09118	432 - 537	5.2e-26	Galactose oxidase-like, Early set domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006296)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45330 AT5G45330 AT5G45330
fragaria_vesca	FvH4_5g24990 FvH4_5g24990 FvH4_5g24990 FvH4_5g24990
malus_domestica	MD06G1011200.v1.1 MD16G1286000.v1.1 MD16G1286100.v1.1
prunus_persica	Prupe.5G013500_v2.0.a1 Prupe.5G013500_v2.0.a1 Prupe.5G013500_v2.0.a1 Prupe.5G013500_v2.0.a1
pyrus_communis	pycom06g00920 pycom16g25770
rosa_chinensis	RchiOBHm_Chr7g0215271
rosa_laevigata	RLG00000002675
rosa_multiflora	Rmu_sc0007904.1_g000005
rosa_roxburghii	Rroxscaffold_3G00244350
rosa_rugosa	Rorug07G0151700 Rorug07G0151800
rosa_samantha	Rh7AG288400 Rh7BG280500 Rh7CG308200 Rh7DG292000
rosa_wichuraiana	Rw7G024650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	491
AatII	GACGTC	1 cut(s)	264
Acc16I	TGCGCA	1 cut(s)	125
Acc36I	ACCTGC	1 cut(s)	64
AccB1I	GGYRCC	1 cut(s)	56
AccBSI	CCGCTC	1 cut(s)	286
AccI	GTMKAC	1 cut(s)	231
AccII	CGCG	6 cut(s)	221, 266, 507, 509, 1173, 1385
AclI	AACGTT	1 cut(s)	630
AclWI	GGATC	5 cut(s)	725, 908, 1523, 1597, 1610
AcoI	YGGCCR	2 cut(s)	64, 370
AcsI	RAATTY	7 cut(s)	11, 157, 172, 524, 867, 1280, 1358
AcyI	GRCGYC	3 cut(s)	57, 261, 591
AfaI	GTAC	6 cut(s)	238, 257, 611, 793, 1096, 1139
AfiI	CCNNNNNNNGG	9 cut(s)	73, 306, 379, 447, 752, 778, 924, 1051, 1202
AgeI	ACCGGT	1 cut(s)	752
AgsI	TTSAA	8 cut(s)	226, 524, 778, 785, 886, 1358, 1425, 1505
AjnI	CCWGG	3 cut(s)	305, 946, 1536
AjuI	GAANNNNNNNTTGG	2 cut(s)	1225, 1257
AluBI	AGCT	5 cut(s)	50, 118, 830, 1487, 1513
AluI	AGCT	5 cut(s)	50, 118, 830, 1487, 1513
Alw21I	GWGCWC	5 cut(s)	314, 752, 832, 1227, 1312
Alw26I	GTCTC	4 cut(s)	347, 379, 932, 1100
Alw44I	GTGCAC	1 cut(s)	1308
AlwI	GGATC	5 cut(s)	725, 908, 1523, 1597, 1610
AlwNI	CAGNNNCTG	2 cut(s)	53, 121
Ama87I	CYCGRG	2 cut(s)	745, 954
AoxI	GGCC	6 cut(s)	64, 370, 949, 1042, 1049, 1593
ApaLI	GTGCAC	1 cut(s)	1308
ApeKI	GCWGC	8 cut(s)	47, 50, 115, 118, 121, 181, 402, 1510
ApoI	RAATTY	7 cut(s)	11, 157, 172, 524, 867, 1280, 1358
AsiGI	ACCGGT	1 cut(s)	752
Asp700I	GAANNNNTTC	1 cut(s)	528
AspLEI	GCGC	9 cut(s)	59, 126, 436, 509, 511, 808, 896, 1387, 1510
AspS9I	GGNCC	3 cut(s)	950, 1042, 1049
AsuC2I	CCSGG	2 cut(s)	1064, 1372
AsuHPI	GGTGA	3 cut(s)	34, 394, 1507
AvaI	CYCGRG	2 cut(s)	745, 954
BaeGI	GKGCMC	1 cut(s)	1312
BaeI	ACNNNNGTAYC	2 cut(s)	1121, 1154
BalI	TGGCCA	1 cut(s)	372
BamHI	GGATCC	1 cut(s)	1602
BanI	GGYRCC	1 cut(s)	56
BanII	GRGCYC	1 cut(s)	832
BbsI	GAAGAC	1 cut(s)	710
Bbv12I	GWGCWC	5 cut(s)	314, 752, 832, 1227, 1312
BbvI	GCAGC	8 cut(s)	37, 59, 105, 108, 127, 168, 414, 1522
BccI	CCATC	8 cut(s)	63, 362, 473, 566, 629, 1133, 1423, 1475
BceAI	ACGGC	2 cut(s)	352, 578
BciT130I	CCWGG	3 cut(s)	307, 948, 1538
BclI	TGATCA	1 cut(s)	39
BcnI	CCSGG	2 cut(s)	1064, 1372
BcoDI	GTCTC	4 cut(s)	347, 379, 932, 1100
BfaI	CTAG	2 cut(s)	1379, 1587
BfmI	CTRYAG	1 cut(s)	795
BfoI	RGCGCY	1 cut(s)	60
BfuAI	ACCTGC	1 cut(s)	64
BglI	GCCNNNNNGGC	1 cut(s)	336
BlpI	GCTNAGC	1 cut(s)	1024
Bme1390I	CCNGG	5 cut(s)	307, 948, 1064, 1372, 1538
BmeT110I	CYCGRG	2 cut(s)	745, 954
BmgT120I	GGNCC	3 cut(s)	950, 1042, 1049
BmiI	GGNNCC	5 cut(s)	58, 206, 556, 1542, 1604
BmrFI	CCNGG	5 cut(s)	307, 948, 1064, 1372, 1538
BmsI	GCATC	3 cut(s)	868, 1022, 1409
BpiI	GAAGAC	1 cut(s)	710
BplI	GAGNNNNNCTC	2 cut(s)	1202, 1234
BpmI	CTGGAG	1 cut(s)	375
Bpu1102I	GCTNAGC	1 cut(s)	1024
BpuMI	CCSGG	2 cut(s)	1064, 1372
Bsa29I	ATCGAT	1 cut(s)	1403
BsaAI	YACGTR	1 cut(s)	1163
BsaBI	GATNNNNATC	2 cut(s)	491, 918
BsaHI	GRCGYC	3 cut(s)	57, 261, 591
BsaI	GGTCTC	2 cut(s)	932, 1100
BsaJI	CCNNGG	5 cut(s)	185, 446, 923, 1045, 1245
BsaWI	WCCGGW	2 cut(s)	689, 752
BsaXI	ACNNNNNCTCC	6 cut(s)	684, 714, 1421, 1446, 1451, 1476
Bsc4I	CCNNNNNNNGG	9 cut(s)	73, 306, 379, 447, 752, 778, 924, 1051, 1202
Bse118I	RCCGGY	4 cut(s)	59, 752, 1051, 1091
Bse1I	ACTGG	1 cut(s)	358
Bse3DI	GCAATG	1 cut(s)	1608
Bse8I	GATNNNNATC	2 cut(s)	491, 918
BseBI	CCWGG	3 cut(s)	307, 948, 1538
BseCI	ATCGAT	1 cut(s)	1403
BseDI	CCNNGG	5 cut(s)	185, 446, 923, 1045, 1245
BseGI	GGATG	5 cut(s)	373, 468, 883, 906, 1125
BseJI	GATNNNNATC	2 cut(s)	491, 918
BseLI	CCNNNNNNNGG	9 cut(s)	73, 306, 379, 447, 752, 778, 924, 1051, 1202
BseMI	GCAATG	1 cut(s)	1608
BseMII	CTCAG	1 cut(s)	1038
BseNI	ACTGG	1 cut(s)	358
BsePI	GCGCGC	1 cut(s)	507
BseRI	GAGGAG	2 cut(s)	304, 815
BseSI	GKGCMC	1 cut(s)	1312
BseX3I	CGGCCG	1 cut(s)	64
BseXI	GCAGC	8 cut(s)	37, 59, 105, 108, 127, 168, 414, 1522
BseYI	CCCAGC	1 cut(s)	1032
BsgI	GTGCAG	1 cut(s)	1370
Bsh1236I	CGCG	6 cut(s)	221, 266, 507, 509, 1173, 1385
Bsh1285I	CGRYCG	6 cut(s)	67, 133, 151, 252, 284, 1171
BshFI	GGCC	6 cut(s)	66, 372, 951, 1044, 1051, 1595
BshNI	GGYRCC	1 cut(s)	56
BshTI	ACCGGT	1 cut(s)	752
BshVI	ATCGAT	1 cut(s)	1403
BsiEI	CGRYCG	6 cut(s)	67, 133, 151, 252, 284, 1171
BsiHKAI	GWGCWC	5 cut(s)	314, 752, 832, 1227, 1312
BsiHKCI	CYCGRG	2 cut(s)	745, 954
BsiSI	CCGG	8 cut(s)	60, 199, 690, 753, 1052, 1064, 1092, 1371
BslFI	GGGAC	2 cut(s)	1049, 1281
BslI	CCNNNNNNNGG	9 cut(s)	73, 306, 379, 447, 752, 778, 924, 1051, 1202
BsmAI	GTCTC	4 cut(s)	347, 379, 932, 1100
BsmFI	GGGAC	2 cut(s)	1049, 1281
BsnI	GGCC	6 cut(s)	66, 372, 951, 1044, 1051, 1595
Bso31I	GGTCTC	2 cut(s)	932, 1100
BsoBI	CYCGRG	2 cut(s)	745, 954
Bsp1286I	GDGCHC	5 cut(s)	314, 752, 832, 1227, 1312
Bsp143I	GATC	7 cut(s)	39, 537, 730, 737, 913, 1528, 1602
Bsp1720I	GCTNAGC	1 cut(s)	1024
Bsp68I	TCGCGA	1 cut(s)	266
BspANI	GGCC	6 cut(s)	66, 372, 951, 1044, 1051, 1595
BspCNI	CTCAG	1 cut(s)	1037
BspDI	ATCGAT	1 cut(s)	1403
BspFNI	CGCG	6 cut(s)	221, 266, 507, 509, 1173, 1385
BspLI	GGNNCC	5 cut(s)	58, 206, 556, 1542, 1604
BspMAI	CTGCAG	1 cut(s)	799
BspMI	ACCTGC	1 cut(s)	64
BspPI	GGATC	5 cut(s)	725, 908, 1523, 1597, 1610
BspQI	GCTCTTC	1 cut(s)	1232
BspT107I	GGYRCC	1 cut(s)	56
BspTNI	GGTCTC	2 cut(s)	932, 1100
BsrBI	CCGCTC	1 cut(s)	286
BsrDI	GCAATG	1 cut(s)	1608
BsrFI	RCCGGY	4 cut(s)	59, 752, 1051, 1091
BsrI	ACTGG	1 cut(s)	358
BssAI	RCCGGY	4 cut(s)	59, 752, 1051, 1091
BssECI	CCNNGG	5 cut(s)	185, 446, 923, 1045, 1245
BssHII	GCGCGC	1 cut(s)	507
BssMI	GATC	7 cut(s)	39, 537, 730, 737, 913, 1528, 1602
BssNI	GRCGYC	3 cut(s)	57, 261, 591
BssT1I	CCWWGG	1 cut(s)	446
Bst2UI	CCWGG	3 cut(s)	307, 948, 1538
Bst4CI	ACNGT	7 cut(s)	236, 390, 565, 700, 791, 1169, 1303
Bst6I	CTCTTC	1 cut(s)	1232
BstACI	GRCGYC	3 cut(s)	57, 261, 591
BstAPI	GCANNNNNTGC	3 cut(s)	79, 121, 1348
BstBAI	YACGTR	1 cut(s)	1163
BstC8I	GCNNGC	4 cut(s)	55, 61, 509, 1030
BstDEI	CTNAG	1 cut(s)	1024
BstDSI	CCRYGG	1 cut(s)	1245
BstF5I	GGATG	5 cut(s)	373, 468, 883, 906, 1125
BstFNI	CGCG	6 cut(s)	221, 266, 507, 509, 1173, 1385
BstH2I	RGCGCY	1 cut(s)	60
BstHHI	GCGC	9 cut(s)	59, 126, 436, 509, 511, 808, 896, 1387, 1510
BstKTI	GATC	7 cut(s)	42, 540, 733, 740, 916, 1531, 1605
BstMAI	GTCTC	4 cut(s)	347, 379, 932, 1100
BstMBI	GATC	7 cut(s)	39, 537, 730, 737, 913, 1528, 1602
BstMCI	CGRYCG	6 cut(s)	67, 133, 151, 252, 284, 1171
BstNI	CCWGG	3 cut(s)	307, 948, 1538
BstNSI	RCATGY	2 cut(s)	115, 1138
BstSCI	CCNGG	5 cut(s)	305, 946, 1062, 1370, 1536
BstSFI	CTRYAG	1 cut(s)	795
BstSLI	GKGCMC	1 cut(s)	1312
BstUI	CGCG	6 cut(s)	221, 266, 507, 509, 1173, 1385
BstV1I	GCAGC	8 cut(s)	37, 59, 105, 108, 127, 168, 414, 1522
BstV2I	GAAGAC	1 cut(s)	710
BstX2I	RGATCY	2 cut(s)	913, 1602
BstYI	RGATCY	2 cut(s)	913, 1602
BstZI	CGGCCG	1 cut(s)	64
Bsu15I	ATCGAT	1 cut(s)	1403
BsuRI	GGCC	6 cut(s)	66, 372, 951, 1044, 1051, 1595
BsuTUI	ATCGAT	1 cut(s)	1403
BtgI	CCRYGG	1 cut(s)	1245
BtgZI	GCGATG	1 cut(s)	999
BtsCI	GGATG	5 cut(s)	373, 468, 883, 906, 1125
BtsIMutI	CAGTG	1 cut(s)	561
BtuMI	TCGCGA	1 cut(s)	266
BveI	ACCTGC	1 cut(s)	64
Cac8I	GCNNGC	4 cut(s)	55, 61, 509, 1030
CaiI	CAGNNNCTG	2 cut(s)	53, 121
CfoI	GCGC	9 cut(s)	59, 126, 436, 509, 511, 808, 896, 1387, 1510
Cfr10I	RCCGGY	4 cut(s)	59, 752, 1051, 1091
Cfr13I	GGNCC	3 cut(s)	950, 1042, 1049
ClaI	ATCGAT	1 cut(s)	1403
CseI	GACGC	2 cut(s)	513, 599
Csp6I	GTAC	6 cut(s)	237, 256, 610, 792, 1095, 1138
CspAI	ACCGGT	1 cut(s)	752
CviQI	GTAC	6 cut(s)	237, 256, 610, 792, 1095, 1138
DdeI	CTNAG	1 cut(s)	1024
DinI	GGCGCC	1 cut(s)	58
DpnI	GATC	7 cut(s)	41, 539, 732, 739, 915, 1530, 1604
DpnII	GATC	7 cut(s)	39, 537, 730, 737, 913, 1528, 1602
DraI	TTTAAA	1 cut(s)	1059
EaeI	YGGCCR	2 cut(s)	64, 370
EagI	CGGCCG	1 cut(s)	64
Eam1104I	CTCTTC	1 cut(s)	1232
EarI	CTCTTC	1 cut(s)	1232
EciI	GGCGGA	3 cut(s)	516, 840, 980
Ecl136II	GAGCTC	1 cut(s)	830
EclXI	CGGCCG	1 cut(s)	64
Eco130I	CCWWGG	1 cut(s)	446
Eco24I	GRGCYC	1 cut(s)	832
Eco31I	GGTCTC	2 cut(s)	932, 1100
Eco52I	CGGCCG	1 cut(s)	64
Eco53kI	GAGCTC	1 cut(s)	830
Eco88I	CYCGRG	2 cut(s)	745, 954
EcoICRI	GAGCTC	1 cut(s)	830
EcoRI	GAATTC	1 cut(s)	1280
EcoRII	CCWGG	3 cut(s)	305, 946, 1536
EcoT14I	CCWWGG	1 cut(s)	446
EcoT38I	GRGCYC	1 cut(s)	832
EgeI	GGCGCC	1 cut(s)	58
EheI	GGCGCC	1 cut(s)	58
ErhI	CCWWGG	1 cut(s)	446
FaqI	GGGAC	2 cut(s)	1049, 1281
FauI	CCCGC	1 cut(s)	1096
FbaI	TGATCA	1 cut(s)	39
FblI	GTMKAC	1 cut(s)	231
FokI	GGATG	5 cut(s)	380, 455, 890, 913, 1112
FriOI	GRGCYC	1 cut(s)	832
FspBI	CTAG	2 cut(s)	1379, 1587
FspI	TGCGCA	1 cut(s)	125
GlaI	GCGC	9 cut(s)	58, 125, 435, 508, 510, 807, 895, 1386, 1509
GsaI	CCCAGC	1 cut(s)	1036
GsuI	CTGGAG	1 cut(s)	375
HaeII	RGCGCY	1 cut(s)	60
HaeIII	GGCC	6 cut(s)	66, 372, 951, 1044, 1051, 1595
HapII	CCGG	8 cut(s)	60, 199, 690, 753, 1052, 1064, 1092, 1371
HgaI	GACGC	2 cut(s)	513, 599
HhaI	GCGC	9 cut(s)	59, 126, 436, 509, 511, 808, 896, 1387, 1510
Hin1I	GRCGYC	3 cut(s)	57, 261, 591
Hin6I	GCGC	9 cut(s)	57, 124, 434, 507, 509, 806, 894, 1385, 1508
HinP1I	GCGC	9 cut(s)	57, 124, 434, 507, 509, 806, 894, 1385, 1508
HincII	GTYRAC	1 cut(s)	232
HindII	GTYRAC	1 cut(s)	232
HinfI	GANTC	5 cut(s)	135, 192, 302, 957, 1114
HpaII	CCGG	8 cut(s)	60, 199, 690, 753, 1052, 1064, 1092, 1371
HphI	GGTGA	3 cut(s)	34, 394, 1507
Hpy166II	GTNNAC	4 cut(s)	232, 297, 930, 1310
Hpy188I	TCNGA	9 cut(s)	164, 281, 351, 534, 678, 735, 900, 1288, 1497
Hpy188III	TCNNGA	3 cut(s)	37, 265, 1262
Hpy8I	GTNNAC	4 cut(s)	232, 297, 930, 1310
Hpy99I	CGWCG	3 cut(s)	263, 266, 1552
HpyAV	CCTTC	5 cut(s)	220, 358, 545, 580, 772
HpyCH4III	ACNGT	7 cut(s)	236, 390, 565, 700, 791, 1169, 1303
HpyCH4IV	ACGT	5 cut(s)	261, 630, 684, 1121, 1162
HpyCH4V	TGCA	7 cut(s)	82, 109, 115, 402, 797, 1310, 1351
HpyF3I	CTNAG	1 cut(s)	1024
HpySE526I	ACGT	5 cut(s)	261, 630, 684, 1121, 1162
Hsp92I	GRCGYC	3 cut(s)	57, 261, 591
HspAI	GCGC	9 cut(s)	57, 124, 434, 507, 509, 806, 894, 1385, 1508
KasI	GGCGCC	1 cut(s)	56
KroI	GCCGGC	1 cut(s)	59
KroNI	GCCGGC	1 cut(s)	61
Ksp22I	TGATCA	1 cut(s)	39
Kzo9I	GATC	7 cut(s)	39, 537, 730, 737, 913, 1528, 1602
LguI	GCTCTTC	1 cut(s)	1232
LmnI	GCTCC	7 cut(s)	317, 560, 774, 827, 835, 1188, 1546
Lsp1109I	GCAGC	8 cut(s)	37, 59, 105, 108, 127, 168, 414, 1522
LweI	GCATC	3 cut(s)	868, 1022, 1409
MaeI	CTAG	2 cut(s)	1379, 1587
MaeII	ACGT	5 cut(s)	261, 630, 684, 1121, 1162
MaeIII	GTNAC	3 cut(s)	269, 685, 1163
MalI	GATC	7 cut(s)	41, 539, 732, 739, 915, 1530, 1604
MbiI	CCGCTC	1 cut(s)	286
MboI	GATC	7 cut(s)	39, 537, 730, 737, 913, 1528, 1602
MboII	GAAGA	4 cut(s)	547, 665, 715, 1219
MflI	RGATCY	2 cut(s)	913, 1602
MhlI	GDGCHC	5 cut(s)	314, 752, 832, 1227, 1312
MlsI	TGGCCA	1 cut(s)	372
MluCI	AATT	9 cut(s)	11, 157, 172, 524, 640, 669, 867, 1280, 1358
MluNI	TGGCCA	1 cut(s)	372
Mly113I	GGCGCC	1 cut(s)	57
MlyI	GAGTC	3 cut(s)	144, 296, 966
MmeI	TCCRAC	2 cut(s)	304, 1142
Mox20I	TGGCCA	1 cut(s)	372
MreI	CGCCGGCG	1 cut(s)	59
MroNI	GCCGGC	1 cut(s)	59
MroXI	GAANNNNTTC	1 cut(s)	528
MscI	TGGCCA	1 cut(s)	372
MseI	TTAA	1 cut(s)	1058
MslI	CAYNNNNRTG	2 cut(s)	110, 563
Msp20I	TGGCCA	1 cut(s)	372
MspA1I	CMGCKG	3 cut(s)	50, 118, 1151
MspI	CCGG	8 cut(s)	60, 199, 690, 753, 1052, 1064, 1092, 1371
MspR9I	CCNGG	5 cut(s)	307, 948, 1064, 1372, 1538
MvaI	CCWGG	3 cut(s)	307, 948, 1538
MvnI	CGCG	6 cut(s)	221, 266, 507, 509, 1173, 1385
NaeI	GCCGGC	1 cut(s)	61
NarI	GGCGCC	1 cut(s)	57
NciI	CCSGG	2 cut(s)	1064, 1372
NdeII	GATC	7 cut(s)	39, 537, 730, 737, 913, 1528, 1602
NgoMIV	GCCGGC	1 cut(s)	59
NlaIV	GGNNCC	5 cut(s)	58, 206, 556, 1542, 1604
NmeAIII	GCCGAG	2 cut(s)	210, 1070
NmuCI	GTSAC	1 cut(s)	1163
NruI	TCGCGA	1 cut(s)	266
NsbI	TGCGCA	1 cut(s)	125
NspI	RCATGY	2 cut(s)	115, 1138
PaeR7I	CTCGAG	1 cut(s)	954
PauI	GCGCGC	1 cut(s)	507
PciSI	GCTCTTC	1 cut(s)	1232
PcsI	WCGNNNNNNNCGW	3 cut(s)	258, 342, 1476
PdiI	GCCGGC	1 cut(s)	61
PdmI	GAANNNNTTC	1 cut(s)	528
PfeI	GAWTC	2 cut(s)	192, 1114
PflFI	GACNNNGTC	2 cut(s)	134, 1475
PfoI	TCCNGGA	1 cut(s)	1370
PinAI	ACCGGT	1 cut(s)	752
PleI	GAGTC	3 cut(s)	143, 296, 965
PluTI	GGCGCC	1 cut(s)	60
PpsI	GAGTC	3 cut(s)	143, 296, 965
Ppu21I	YACGTR	1 cut(s)	1163
PsiI	TTATAA	1 cut(s)	491
Psp124BI	GAGCTC	1 cut(s)	832
Psp1406I	AACGTT	1 cut(s)	630
Psp6I	CCWGG	3 cut(s)	305, 946, 1536
PspFI	CCCAGC	1 cut(s)	1032
PspGI	CCWGG	3 cut(s)	305, 946, 1536
PspN4I	GGNNCC	5 cut(s)	58, 206, 556, 1542, 1604
PspPI	GGNCC	3 cut(s)	950, 1042, 1049
PspXI	VCTCGAGB	1 cut(s)	954
PstI	CTGCAG	1 cut(s)	799
PstNI	CAGNNNCTG	2 cut(s)	53, 121
PsuI	RGATCY	2 cut(s)	913, 1602
PsyI	GACNNNGTC	2 cut(s)	134, 1475
PteI	GCGCGC	1 cut(s)	507
PvuII	CAGCTG	2 cut(s)	50, 118
RruI	TCGCGA	1 cut(s)	266
RsaI	GTAC	6 cut(s)	238, 257, 611, 793, 1096, 1139
RsaNI	GTAC	6 cut(s)	237, 256, 610, 792, 1095, 1138
RseI	CAYNNNNRTG	2 cut(s)	110, 563
SacI	GAGCTC	1 cut(s)	832
SalI	GTCGAC	1 cut(s)	230
SapI	GCTCTTC	1 cut(s)	1232
SaqAI	TTAA	1 cut(s)	1058
Sau3AI	GATC	7 cut(s)	39, 537, 730, 737, 913, 1528, 1602
Sau96I	GGNCC	3 cut(s)	950, 1042, 1049
SchI	GAGTC	3 cut(s)	144, 296, 966
ScrFI	CCNGG	5 cut(s)	307, 948, 1064, 1372, 1538
SduI	GDGCHC	5 cut(s)	314, 752, 832, 1227, 1312
SfaNI	GCATC	3 cut(s)	868, 1022, 1409
SfcI	CTRYAG	1 cut(s)	795
SfoI	GGCGCC	1 cut(s)	58
Sfr274I	CTCGAG	1 cut(s)	954
SgrAI	CRCCGGYG	1 cut(s)	59
SlaI	CTCGAG	1 cut(s)	954
SmiMI	CAYNNNNRTG	2 cut(s)	110, 563
SmlI	CTYRAG	1 cut(s)	954
SmoI	CTYRAG	1 cut(s)	954
Sse9I	AATT	9 cut(s)	11, 157, 172, 524, 640, 669, 867, 1280, 1358
SspDI	GGCGCC	1 cut(s)	56
SspMI	CTAG	2 cut(s)	1379, 1587
SstI	GAGCTC	1 cut(s)	832
StyD4I	CCNGG	5 cut(s)	305, 946, 1062, 1370, 1536
StyI	CCWWGG	1 cut(s)	446
TaaI	ACNGT	7 cut(s)	236, 390, 565, 700, 791, 1169, 1303
TaiI	ACGT	5 cut(s)	264, 633, 687, 1124, 1165
TaqI	TCGA	7 cut(s)	147, 231, 252, 664, 955, 1403, 1470
TaqII	GACCGA	3 cut(s)	147, 165, 238
TasI	AATT	9 cut(s)	11, 157, 172, 524, 640, 669, 867, 1280, 1358
TauI	GCSGC	3 cut(s)	66, 825, 1385
TfiI	GAWTC	2 cut(s)	192, 1114
Tru1I	TTAA	1 cut(s)	1058
Tru9I	TTAA	1 cut(s)	1058
TscAI	CASTG	1 cut(s)	568
TseFI	GTSAC	1 cut(s)	1163
TseI	GCWGC	8 cut(s)	47, 50, 115, 118, 121, 181, 402, 1510
Tsp45I	GTSAC	1 cut(s)	1163
TspDTI	ATGAA	4 cut(s)	637, 1127, 1457, 1562
TspGWI	ACGGA	7 cut(s)	822, 1002, 1094, 1210, 1234, 1250, 1295
TspRI	CASTG	1 cut(s)	568
Tth111I	GACNNNGTC	2 cut(s)	134, 1475
VneI	GTGCAC	1 cut(s)	1308
XapI	RAATTY	7 cut(s)	11, 157, 172, 524, 867, 1280, 1358
XceI	RCATGY	2 cut(s)	115, 1138
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1328
XhoI	CTCGAG	1 cut(s)	954
XmiI	GTMKAC	1 cut(s)	231
XmnI	GAANNNNTTC	1 cut(s)	528
XspI	CTAG	2 cut(s)	1379, 1587
ZraI	GACGTC	1 cut(s)	262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.