FvH4_5g27790

Muniscin C-terminal mu homology domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0012011
Physical Location & Seq
Reverse (-)
18991004 .. 18992938
1935 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g27790.t1

Sequence Viewer

Length: 1935 bp
ATGTCTTGCTTAGCACTCTCTCTCCAACCAGCGAATGGATCCGACATCCTCCTCCAAACCCGCGAGTGGTTCCCTCCCGCCCGAGCCCTCGTCGCCGTCTCCTCCTTCCGCGAAACCCGCCTCGCCTTCGCCGCCTCCAAGCAACACCACCACACCAAAGACCACCCCTCCTCCAACTCCAACTCCACCTCCGACCCCTCCGCCGACTCCATCGCCTCCCTCGGCGACGATCCCCTCTCCGCCTCCAGCGGCCAGCTCATCGTCGGCGTCGAGAGCCGCTACCGCGTCGTCTACCGCCTCGTTAACTCGATCTACGTCCTCGGCATCACCACCGCCGACCACGACAACTCCATCAACGTCTTCGAGTGCATCCACATCGTCAACCAGGCCGTCAGCGTCGTCGTCACCGCCTGCCGCGGCGTCGACGTCACCCCCGAGAAGCTCGCCCGCAAGTACGCCGAGGTCTACATGGCCCTCGACATCGTCCTCCGCGGCGTCAGCAACATCCGCCTCGCCGCCATGCTCTCCTCCATGCACGCCGACGGCATTGCCAAGATGGTCCACTCCGCCATGGACACCGAGAACAAGATCCGCGGCGCCGAGAGCTGGAGAGGCCTCGAGGGCCTCGCCGTTGACCACGAGGCCGGAATCGCCGCCTTCAACCACACTGCCTTTGAATTGCCGCCGGAGACGATAGCTGCCGGGGACGAGGTGGCAGCCAGTTTGGCTCCGGTGGTGCAGAGTGAGGAGAAGGATCAGAAGGAGGAGGAGGAAGAGAGTGAAGCTGAGAAAGATCCATTTGCAGCTAGTGAGAAGATTAATCAGCCTCAGGAGCTGGTGACTGGATTCAAGAAGAACAAGGATCCTTCGGCTACCGACTTACAACTGGCTCTGTCTACTCTTGAGGTCACTACATTGCCCCCTGCAGAGGCCACACAGTCTACTCATATCGCGGTCGAAGGGTTTGAAGGGCAGTATGGTGGGATTGAGTTTGGGAATGAGCAGGCTTCTTTGAACGAGGCTTTCGAAGGGTTTTCAGATGCTTGGGGTGGTGGTTTGGATGCCTCTGAGTTTGTTGGGACCAAGAAGGTTGCAAAGTCGCAAGGGCTTGGTGGGCTTGAGTTGTTGCAGACTGGACCGGATCCTCCTAAAGCTGCTGGTGCTGCTGCGGCAGGTACTCCTCTTGAGGATCTTGTAGGAAAAACTGAAATGAAGGGTCCCGAGATGAACATTGTGGAAGAGATCAGTGTTGAGTTTAGGGAATCATTACTTGCCAGAGTTGCATTGAAGGGTGTTGTTTATTTGAAAACTCTGCCCACCAAAACTAGTGGGGATAAAGAAACTGAGTTTTCCTTCAGGGTTGAGGGAACCAGCGCAGTTAAAAGGTTTATTATGCAGAATTCTCGTATTAGTAGTCTAGGCAATGGAATGTTTCATGTGAGGACTGCAGCCTCTGATGAGCCCTTACCCATTTTGAAATATAGTCTGCAACCTAGGTTAACCCCATTGCCTTTGAGGGTTCGTCTTGTGCAACGTCACACGGGAAGTTTGCTGTCAGTGATGATACAATATGTGTCGAACCCTGAATTGCCGGCACCTTTGACTGATGTGACCTTTGTTGTGAAACTTCCCCTTGATCCTACATTGTTGAAGGTCTCACCGAAAGCTGTATTAAATCGGTCTGAGAAAGAGCTGAAATGGCATGTCCCTGAGATTCCATTGAATGGACCACCTGGTCGGTTGAGGGTAAGGATGCCTGTAGATTCTAATGAAGAAGATGGTGGTGAGGAGATTGACGTTGTTGCCTATGTGAAATTTTCTTGGCAAGGCAACAGATCATTGTCGGGAGTCTGTCTACGGCCAGCTTCTGAGGGTATGACAGACTTTTATGAGGTTAATCACAGGTATGAGAGTGGGGTATATATGTGCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
muHD

Protein Analysis

645

Amino Acids

69.75

Weight (kDa)

5.14

Isoelectric Point (pI)

44.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
muHD PF10291 408 - 619 1.4e-13 Muniscin C-terminal mu homology domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G57460
fragaria_vesca FvH4_5g27790
malus_domestica MD13G1254300.v1.1 MD13G1254800.v1.1 MD16G1258100.v1.1
prunus_persica Prupe.2G007900_v2.0.a1
pyrus_communis pycom16g22240 pycom16g22250
rosa_chinensis RchiOBHm_Chr4g0402481
rosa_laevigata RLG00000009080
rosa_multiflora Rmu_co8490925.1_g000001 Rmu_ssc0000330.1_g000030
rosa_roxburghii Rroxscaffold_5G00347170
rosa_rugosa Rorug04G0035800
rosa_samantha Rh4AG113000 Rh4BG105600 Rh4CG120000 Rh4DG105000
rosa_wichuraiana Rw4G009070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1734
AatII GACGTC 1 cut(s) 429
AbsI CCTCGAGG 1 cut(s) 617
Acc36I ACCTGC 1 cut(s) 1163
AccB1I GGYRCC 2 cut(s) 596, 1594
AccB7I CCANNNNNTGG 2 cut(s) 35, 1724
AccI GTMKAC 6 cut(s) 291, 423, 465, 896, 941, 1855
AccII CGCG 7 cut(s) 63, 111, 285, 417, 492, 594, 953
AcoI YGGCCR 2 cut(s) 250, 1859
AcsI RAATTY 2 cut(s) 1399, 1814
AcuI CTGAAG 1 cut(s) 1339
AcyI GRCGYC 5 cut(s) 267, 420, 426, 495, 597
AfaI GTAC 2 cut(s) 455, 1177
AfiI CCNNNNNNNGG 5 cut(s) 35, 66, 606, 928, 1724
AhlI ACTAGT 1 cut(s) 1325
AjnI CCWGG 2 cut(s) 384, 1732
Alw26I GTCTC 3 cut(s) 103, 683, 1660
AlwNI CAGNNNCTG 3 cut(s) 835, 1454, 1868
Ama87I CYCGRG 4 cut(s) 81, 434, 617, 1220
AoxI GGCC 8 cut(s) 250, 387, 471, 613, 622, 642, 930, 1859
ApeKI GCWGC 7 cut(s) 698, 716, 803, 1154, 1163, 1166, 1448
ApoI RAATTY 2 cut(s) 1399, 1814
AseI ATTAAT 1 cut(s) 819
AspA2I CCTAGG 1 cut(s) 1493
AspLEI GCGC 2 cut(s) 599, 1376
AspS9I GGNCC 7 cut(s) 472, 559, 622, 1080, 1136, 1217, 1727
AsuC2I CCSGG 1 cut(s) 703
AsuHPI GGTGA 6 cut(s) 319, 397, 421, 850, 1650, 1796
AsuII TTCGAA 1 cut(s) 1026
AvaI CYCGRG 4 cut(s) 81, 434, 617, 1220
AvaII GGWCC 5 cut(s) 559, 1080, 1136, 1217, 1727
AvrII CCTAGG 1 cut(s) 1493
AxyI CCTNAGG 1 cut(s) 828
BamHI GGATCC 3 cut(s) 38, 862, 1141
BanI GGYRCC 2 cut(s) 596, 1594
BanII GRGCYC 2 cut(s) 88, 1464
BauI CACGAG 1 cut(s) 638
BbsI GAAGAC 1 cut(s) 352
BbvI GCAGC 7 cut(s) 685, 728, 815, 1141, 1150, 1153, 1460
BccI CCATC 4 cut(s) 218, 359, 550, 1772
BceAI ACGGC 5 cut(s) 80, 374, 559, 614, 1874
BcgI CGANNNNNNTGC 6 cut(s) 358, 392, 530, 564, 1385, 1419
BciT130I CCWGG 2 cut(s) 386, 1734
BcnI CCSGG 1 cut(s) 703
BcoDI GTCTC 3 cut(s) 103, 683, 1660
BcuI ACTAGT 1 cut(s) 1325
BfaI CTAG 4 cut(s) 807, 1326, 1418, 1494
BfmI CTRYAG 3 cut(s) 924, 1446, 1758
BfoI RGCGCY 1 cut(s) 600
BfuAI ACCTGC 1 cut(s) 1163
BglI GCCNNNNNGGC 2 cut(s) 621, 725
BlnI CCTAGG 1 cut(s) 1493
BlpI GCTNAGC 1 cut(s) 10
Bme1390I CCNGG 3 cut(s) 386, 703, 1734
Bme18I GGWCC 5 cut(s) 559, 1080, 1136, 1217, 1727
BmeT110I CYCGRG 4 cut(s) 81, 434, 617, 1220
BmgT120I GGNCC 7 cut(s) 472, 559, 622, 1080, 1136, 1217, 1727
BmrFI CCNGG 3 cut(s) 386, 703, 1734
BmsI GCATC 5 cut(s) 333, 378, 1030, 1051, 1743
BpiI GAAGAC 1 cut(s) 352
BpmI CTGGAG 2 cut(s) 229, 628
Bpu1102I GCTNAGC 1 cut(s) 10
Bpu14I TTCGAA 1 cut(s) 1026
BpuEI CTTGAG 3 cut(s) 923, 1139, 1205
BpuMI CCSGG 1 cut(s) 703
BsaHI GRCGYC 5 cut(s) 267, 420, 426, 495, 597
BsaI GGTCTC 1 cut(s) 1660
BsaJI CCNNGG 9 cut(s) 220, 319, 415, 459, 490, 570, 592, 702, 1493
BsaWI WCCGGW 2 cut(s) 730, 1138
Bsc4I CCNNNNNNNGG 5 cut(s) 35, 66, 606, 928, 1724
Bse118I RCCGGY 1 cut(s) 1591
Bse1I ACTGG 4 cut(s) 720, 847, 891, 1138
Bse21I CCTNAGG 1 cut(s) 828
Bse3DI GCAATG 4 cut(s) 546, 914, 1429, 1505
BseBI CCWGG 2 cut(s) 386, 1734
BseDI CCNNGG 9 cut(s) 220, 319, 415, 459, 490, 570, 592, 702, 1493
BseGI GGATG 5 cut(s) 45, 369, 504, 1066, 1758
BseLI CCNNNNNNNGG 5 cut(s) 35, 66, 606, 928, 1724
BseMI GCAATG 4 cut(s) 546, 914, 1429, 1505
BseMII CTCAG 7 cut(s) 777, 842, 1059, 1335, 1674, 1701, 1860
BseNI ACTGG 4 cut(s) 720, 847, 891, 1138
BseRI GAGGAG 9 cut(s) 41, 91, 160, 517, 761, 779, 782, 1170, 1802
BseXI GCAGC 7 cut(s) 685, 728, 815, 1141, 1150, 1153, 1460
BsgI GTGCAG 1 cut(s) 758
Bsh1236I CGCG 7 cut(s) 63, 111, 285, 417, 492, 594, 953
Bsh1285I CGRYCG 1 cut(s) 957
BshFI GGCC 8 cut(s) 252, 389, 473, 615, 624, 644, 932, 1861
BshNI GGYRCC 2 cut(s) 596, 1594
BsiEI CGRYCG 1 cut(s) 957
BsiHKCI CYCGRG 4 cut(s) 81, 434, 617, 1220
BsiSI CCGG 6 cut(s) 645, 686, 702, 731, 1139, 1592
BslFI GGGAC 4 cut(s) 719, 1093, 1203, 1691
BslI CCNNNNNNNGG 5 cut(s) 35, 66, 606, 928, 1724
BsmAI GTCTC 3 cut(s) 103, 683, 1660
BsmBI CGTCTC 2 cut(s) 103, 683
BsmFI GGGAC 4 cut(s) 719, 1093, 1203, 1691
BsnI GGCC 8 cut(s) 252, 389, 473, 615, 624, 644, 932, 1861
Bso31I GGTCTC 1 cut(s) 1660
BsoBI CYCGRG 4 cut(s) 81, 434, 617, 1220
Bsp119I TTCGAA 1 cut(s) 1026
Bsp1286I GDGCHC 2 cut(s) 88, 1464
Bsp1720I GCTNAGC 1 cut(s) 10
Bsp19I CCATGG 1 cut(s) 570
BspANI GGCC 8 cut(s) 252, 389, 473, 615, 624, 644, 932, 1861
BspCNI CTCAG 7 cut(s) 778, 841, 1060, 1336, 1675, 1702, 1861
BspFNI CGCG 7 cut(s) 63, 111, 285, 417, 492, 594, 953
BspMAI CTGCAG 2 cut(s) 928, 1450
BspMI ACCTGC 1 cut(s) 1163
BspT104I TTCGAA 1 cut(s) 1026
BspT107I GGYRCC 2 cut(s) 596, 1594
BspTNI GGTCTC 1 cut(s) 1660
BsrDI GCAATG 4 cut(s) 546, 914, 1429, 1505
BsrFI RCCGGY 1 cut(s) 1591
BsrI ACTGG 4 cut(s) 720, 847, 891, 1138
BssAI RCCGGY 1 cut(s) 1591
BssECI CCNNGG 9 cut(s) 220, 319, 415, 459, 490, 570, 592, 702, 1493
BssNI GRCGYC 5 cut(s) 267, 420, 426, 495, 597
BssSI CACGAG 1 cut(s) 638
BssT1I CCWWGG 2 cut(s) 570, 1493
Bst2BI CACGAG 1 cut(s) 638
Bst2UI CCWGG 2 cut(s) 386, 1734
Bst4CI ACNGT 1 cut(s) 939
Bst6I CTCTTC 2 cut(s) 768, 1233
BstACI GRCGYC 5 cut(s) 267, 420, 426, 495, 597
BstBI TTCGAA 1 cut(s) 1026
BstC8I GCNNGC 8 cut(s) 254, 412, 444, 448, 537, 1005, 1593, 1863
BstDEI CTNAG 8 cut(s) 10, 786, 828, 1068, 1344, 1683, 1710, 1869
BstDSI CCRYGG 4 cut(s) 415, 490, 570, 592
BstF5I GGATG 5 cut(s) 45, 369, 504, 1066, 1758
BstFNI CGCG 7 cut(s) 63, 111, 285, 417, 492, 594, 953
BstH2I RGCGCY 1 cut(s) 600
BstHHI GCGC 2 cut(s) 599, 1376
BstMAI GTCTC 3 cut(s) 103, 683, 1660
BstMCI CGRYCG 1 cut(s) 957
BstNI CCWGG 2 cut(s) 386, 1734
BstNSI RCATGY 1 cut(s) 1706
BstSCI CCNGG 3 cut(s) 384, 701, 1732
BstSFI CTRYAG 3 cut(s) 924, 1446, 1758
BstUI CGCG 7 cut(s) 63, 111, 285, 417, 492, 594, 953
BstV1I GCAGC 7 cut(s) 685, 728, 815, 1141, 1150, 1153, 1460
BstV2I GAAGAC 1 cut(s) 352
BstX2I RGATCY 6 cut(s) 38, 588, 793, 862, 1141, 1189
BstYI RGATCY 6 cut(s) 38, 588, 793, 862, 1141, 1189
Bsu36I CCTNAGG 1 cut(s) 828
BsuRI GGCC 8 cut(s) 252, 389, 473, 615, 624, 644, 932, 1861
BtgI CCRYGG 4 cut(s) 415, 490, 570, 592
BtgZI GCGATG 1 cut(s) 196
BtsCI GGATG 5 cut(s) 45, 369, 504, 1066, 1758
BtsI GCAGTG 1 cut(s) 666
BtsIMutI CAGTG 3 cut(s) 666, 1252, 1563
BveI ACCTGC 1 cut(s) 1163
Cac8I GCNNGC 8 cut(s) 254, 412, 444, 448, 537, 1005, 1593, 1863
CaiI CAGNNNCTG 3 cut(s) 835, 1454, 1868
CfoI GCGC 2 cut(s) 599, 1376
Cfr10I RCCGGY 1 cut(s) 1591
Cfr13I GGNCC 7 cut(s) 472, 559, 622, 1080, 1136, 1217, 1727
Cfr42I CCGCGG 3 cut(s) 418, 493, 595
CseI GACGC 5 cut(s) 256, 274, 385, 409, 484
CsiI ACCWGGT 1 cut(s) 1732
Csp6I GTAC 2 cut(s) 454, 1176
CspCI CAANNNNNGTGG 2 cut(s) 1309, 1344
CviAII CATG 6 cut(s) 469, 520, 532, 571, 1436, 1703
CviQI GTAC 2 cut(s) 454, 1176
DdeI CTNAG 8 cut(s) 10, 786, 828, 1068, 1344, 1683, 1710, 1869
DinI GGCGCC 1 cut(s) 598
DrdI GACNNNNNNGTC 1 cut(s) 1734
DseDI GACNNNNNNGTC 1 cut(s) 1734
EaeI YGGCCR 2 cut(s) 250, 1859
Eam1104I CTCTTC 2 cut(s) 768, 1233
EarI CTCTTC 2 cut(s) 768, 1233
EciI GGCGGA 4 cut(s) 190, 229, 497, 556
Eco130I CCWWGG 2 cut(s) 570, 1493
Eco147I AGGCCT 1 cut(s) 615
Eco24I GRGCYC 2 cut(s) 88, 1464
Eco31I GGTCTC 1 cut(s) 1660
Eco47I GGWCC 5 cut(s) 559, 1080, 1136, 1217, 1727
Eco57I CTGAAG 1 cut(s) 1339
Eco81I CCTNAGG 1 cut(s) 828
Eco88I CYCGRG 4 cut(s) 81, 434, 617, 1220
EcoO109I RGGNCCY 2 cut(s) 622, 1217
EcoRI GAATTC 1 cut(s) 1399
EcoRII CCWGG 2 cut(s) 384, 1732
EcoT14I CCWWGG 2 cut(s) 570, 1493
EcoT38I GRGCYC 2 cut(s) 88, 1464
EgeI GGCGCC 1 cut(s) 598
EheI GGCGCC 1 cut(s) 598
ErhI CCWWGG 2 cut(s) 570, 1493
Esp3I CGTCTC 2 cut(s) 103, 683
FaeI CATG 6 cut(s) 472, 523, 535, 574, 1439, 1706
FaqI GGGAC 4 cut(s) 719, 1093, 1203, 1691
FatI CATG 6 cut(s) 468, 519, 531, 570, 1435, 1702
FauI CCCGC 4 cut(s) 68, 85, 125, 455
FblI GTMKAC 6 cut(s) 291, 423, 465, 896, 941, 1855
FokI GGATG 5 cut(s) 32, 356, 491, 1073, 1765
FriOI GRGCYC 2 cut(s) 88, 1464
FspBI CTAG 4 cut(s) 807, 1326, 1418, 1494
GlaI GCGC 2 cut(s) 598, 1375
GsuI CTGGAG 2 cut(s) 229, 628
HaeII RGCGCY 1 cut(s) 600
HaeIII GGCC 8 cut(s) 252, 389, 473, 615, 624, 644, 932, 1861
HapII CCGG 6 cut(s) 645, 686, 702, 731, 1139, 1592
HgaI GACGC 5 cut(s) 256, 274, 385, 409, 484
HhaI GCGC 2 cut(s) 599, 1376
Hin1I GRCGYC 5 cut(s) 267, 420, 426, 495, 597
Hin1II CATG 6 cut(s) 472, 523, 535, 574, 1439, 1706
Hin6I GCGC 2 cut(s) 597, 1374
HinP1I GCGC 2 cut(s) 597, 1374
HincII GTYRAC 5 cut(s) 304, 382, 424, 634, 1500
HindII GTYRAC 5 cut(s) 304, 382, 424, 634, 1500
HinfI GANTC 7 cut(s) 206, 648, 846, 1262, 1714, 1763, 1848
HpaI GTTAAC 2 cut(s) 304, 1500
HpaII CCGG 6 cut(s) 645, 686, 702, 731, 1139, 1592
HphI GGTGA 6 cut(s) 319, 397, 421, 850, 1650, 1796
Hpy188I TCNGA 8 cut(s) 43, 193, 759, 1039, 1069, 1456, 1684, 1870
Hpy188III TCNNGA 7 cut(s) 271, 830, 850, 902, 1184, 1220, 1845
HpyCH4III ACNGT 1 cut(s) 939
HpyCH4IV ACGT 5 cut(s) 315, 357, 426, 1534, 1797
HpyF3I CTNAG 8 cut(s) 10, 786, 828, 1068, 1344, 1683, 1710, 1869
HpySE526I ACGT 5 cut(s) 315, 357, 426, 1534, 1797
Hsp92I GRCGYC 5 cut(s) 267, 420, 426, 495, 597
Hsp92II CATG 6 cut(s) 472, 523, 535, 574, 1439, 1706
HspAI GCGC 2 cut(s) 597, 1374
KasI GGCGCC 1 cut(s) 596
KflI GGGWCCC 1 cut(s) 1217
KroI GCCGGC 1 cut(s) 1591
KroNI GCCGGC 1 cut(s) 1593
KspAI GTTAAC 2 cut(s) 304, 1500
KspI CCGCGG 3 cut(s) 418, 493, 595
LmnI GCTCC 2 cut(s) 733, 832
Lsp1109I GCAGC 7 cut(s) 685, 728, 815, 1141, 1150, 1153, 1460
LweI GCATC 5 cut(s) 333, 378, 1030, 1051, 1743
MabI ACCWGGT 1 cut(s) 1732
MaeI CTAG 4 cut(s) 807, 1326, 1418, 1494
MaeII ACGT 5 cut(s) 315, 357, 426, 1534, 1797
MaeIII GTNAC 6 cut(s) 403, 427, 838, 907, 1535, 1609
MboII GAAGA 7 cut(s) 352, 785, 826, 865, 1250, 1784, 1787
MfeI CAATTG 1 cut(s) 1930
MflI RGATCY 6 cut(s) 38, 588, 793, 862, 1141, 1189
MhlI GDGCHC 2 cut(s) 88, 1464
MluCI AATT 5 cut(s) 677, 1399, 1586, 1814, 1930
Mly113I GGCGCC 1 cut(s) 597
MlyI GAGTC 2 cut(s) 200, 1857
MmeI TCCRAC 5 cut(s) 49, 66, 198, 204, 216
MroNI GCCGGC 1 cut(s) 1591
MseI TTAA 6 cut(s) 303, 819, 1380, 1499, 1673, 1896
MslI CAYNNNNRTG 1 cut(s) 1905
MspA1I CMGCKG 4 cut(s) 249, 417, 492, 594
MspI CCGG 6 cut(s) 645, 686, 702, 731, 1139, 1592
MspR9I CCNGG 3 cut(s) 386, 703, 1734
MunI CAATTG 1 cut(s) 1930
MvaI CCWGG 2 cut(s) 386, 1734
MvnI CGCG 7 cut(s) 63, 111, 285, 417, 492, 594, 953
NaeI GCCGGC 1 cut(s) 1593
NarI GGCGCC 1 cut(s) 597
NciI CCSGG 1 cut(s) 703
NcoI CCATGG 1 cut(s) 570
NgoMIV GCCGGC 1 cut(s) 1591
NlaIII CATG 6 cut(s) 472, 523, 535, 574, 1439, 1706
NmeAIII GCCGAG 4 cut(s) 201, 300, 484, 625
NmuCI GTSAC 6 cut(s) 403, 427, 838, 907, 1535, 1609
NspI RCATGY 1 cut(s) 1706
NspV TTCGAA 1 cut(s) 1026
PaeR7I CTCGAG 1 cut(s) 617
PceI AGGCCT 1 cut(s) 615
PcsI WCGNNNNNNNCGW 3 cut(s) 267, 432, 1023
PdiI GCCGGC 1 cut(s) 1593
PfeI GAWTC 5 cut(s) 648, 846, 1262, 1714, 1763
PflFI GACNNNGTC 1 cut(s) 482
PflMI CCANNNNNTGG 2 cut(s) 35, 1724
PleI GAGTC 2 cut(s) 200, 1856
PluTI GGCGCC 1 cut(s) 600
PpsI GAGTC 2 cut(s) 200, 1856
PpuMI RGGWCCY 1 cut(s) 1217
PshBI ATTAAT 1 cut(s) 819
Psp5II RGGWCCY 1 cut(s) 1217
Psp6I CCWGG 2 cut(s) 384, 1732
PspGI CCWGG 2 cut(s) 384, 1732
PspPI GGNCC 7 cut(s) 472, 559, 622, 1080, 1136, 1217, 1727
PspPPI RGGWCCY 1 cut(s) 1217
PspXI VCTCGAGB 1 cut(s) 617
PstI CTGCAG 2 cut(s) 928, 1450
PstNI CAGNNNCTG 3 cut(s) 835, 1454, 1868
PsuI RGATCY 6 cut(s) 38, 588, 793, 862, 1141, 1189
PsyI GACNNNGTC 1 cut(s) 482
RsaI GTAC 2 cut(s) 455, 1177
RsaNI GTAC 2 cut(s) 454, 1176
RseI CAYNNNNRTG 1 cut(s) 1905
SacII CCGCGG 3 cut(s) 418, 493, 595
SalI GTCGAC 1 cut(s) 422
SaqAI TTAA 6 cut(s) 303, 819, 1380, 1499, 1673, 1896
Sau96I GGNCC 7 cut(s) 472, 559, 622, 1080, 1136, 1217, 1727
SchI GAGTC 2 cut(s) 200, 1857
ScrFI CCNGG 3 cut(s) 386, 703, 1734
SduI GDGCHC 2 cut(s) 88, 1464
SexAI ACCWGGT 1 cut(s) 1732
SfaNI GCATC 5 cut(s) 333, 378, 1030, 1051, 1743
SfcI CTRYAG 3 cut(s) 924, 1446, 1758
SfiI GGCCNNNNNGGCC 1 cut(s) 621
SfoI GGCGCC 1 cut(s) 598
Sfr274I CTCGAG 1 cut(s) 617
Sfr303I CCGCGG 3 cut(s) 418, 493, 595
SfuI TTCGAA 1 cut(s) 1026
SgrBI CCGCGG 3 cut(s) 418, 493, 595
SgrDI CGTCGACG 1 cut(s) 422
SinI GGWCC 5 cut(s) 559, 1080, 1136, 1217, 1727
SlaI CTCGAG 1 cut(s) 617
SmiMI CAYNNNNRTG 1 cut(s) 1905
SmlI CTYRAG 4 cut(s) 617, 902, 1118, 1184
SmoI CTYRAG 4 cut(s) 617, 902, 1118, 1184
SpeI ACTAGT 1 cut(s) 1325
Sse9I AATT 5 cut(s) 677, 1399, 1586, 1814, 1930
SseBI AGGCCT 1 cut(s) 615
SspDI GGCGCC 1 cut(s) 596
SspMI CTAG 4 cut(s) 807, 1326, 1418, 1494
StuI AGGCCT 1 cut(s) 615
StyD4I CCNGG 3 cut(s) 384, 701, 1732
StyI CCWWGG 2 cut(s) 570, 1493
TaaI ACNGT 1 cut(s) 939
TaiI ACGT 5 cut(s) 318, 360, 429, 1537, 1800
TaqI TCGA 9 cut(s) 270, 308, 363, 423, 477, 618, 957, 1026, 1577
TaqII GACCGA 1 cut(s) 1668
TasI AATT 5 cut(s) 677, 1399, 1586, 1814, 1930
TfiI GAWTC 5 cut(s) 648, 846, 1262, 1714, 1763
Tru1I TTAA 6 cut(s) 303, 819, 1380, 1499, 1673, 1896
Tru9I TTAA 6 cut(s) 303, 819, 1380, 1499, 1673, 1896
TscAI CASTG 3 cut(s) 673, 1252, 1563
TseFI GTSAC 6 cut(s) 403, 427, 838, 907, 1535, 1609
TseI GCWGC 7 cut(s) 698, 716, 803, 1154, 1163, 1166, 1448
Tsp45I GTSAC 6 cut(s) 403, 427, 838, 907, 1535, 1609
TspDTI ATGAA 4 cut(s) 1226, 1241, 1424, 1785
TspRI CASTG 3 cut(s) 673, 1252, 1563
Tth111I GACNNNGTC 1 cut(s) 482
Van91I CCANNNNNTGG 2 cut(s) 35, 1724
VpaK11BI GGWCC 5 cut(s) 559, 1080, 1136, 1217, 1727
VspI ATTAAT 1 cut(s) 819
XapI RAATTY 2 cut(s) 1399, 1814
XceI RCATGY 1 cut(s) 1706
XcmI CCANNNNNNNNNTGG 1 cut(s) 32
XhoI CTCGAG 1 cut(s) 617
XmaJI CCTAGG 1 cut(s) 1493
XmiI GTMKAC 6 cut(s) 291, 423, 465, 896, 941, 1855
XspI CTAG 4 cut(s) 807, 1326, 1418, 1494
ZraI GACGTC 1 cut(s) 427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.