RchiOBHm_Chr4g0402481

Muniscin C-terminal mu homology domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0012011
Physical Location & Seq
Reverse (-)
21032048 .. 21034350
2303 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37427

Sequence Viewer

Length: 2088 bp
ATGCAAATTTTTGAGAGGCCTGTTAAATTAGATCAAAATCCACACCCATTTCCCTCAACTACCCTACGTCTTCTTCCATCGGAGTCTTGCAGATCTCCACCTCTTCTGACGTATCACCGAAACCGTGGATCGGATCTGAACTCAGATCCAGTTCCCACCATGTCTTGCTTAGCCCTCTCTCTCCAACCCGCCAATGGATCCGACATCCTGCTCCAAACCCGAGAATGGTTCCCTCCGGCCCGAGCCCTCGTCGCCGTCTCCTCCTTCCGCGAAACCCGCCTGGCCTTCGCCGCCTCAAAGCAACAGCAGCAACTCCACAACCAGAGCAAAGACCACCCCAACAACTCCGACTCCTCCGCCGATTCCATCGCCTCCCTCGGCGACGACCCCCTCGCCGCCTCCAGCGGCCAGCTCATCGTCGGCGTCGAGAGCCGCTTCCGCGTCGTGTACCGCCTGGTGAACTCCATCTACGTCCTCGGGATCACCACCGCCGACCACGACAACTCCATCAACGTCTTCGAGTGCATCCACATCGTCAACCAGGCCGTCAGCGTCGTCGTCACCGCCTGCCGCGGCGTCGACGTCACGCCGGAGAAGCTCGCCCGCAAGTACGCCGAGATCTACATGGCGCTCGACATCGTCCTCCGTGGCGTCAGCAACATCCGCCTGGCGGCGATGCTGTCGTCGATGCACGGCGACGGCATTGCCAAGATGGTCCACTCGGCGCTGGACACCGAGAACAAGGTCCGAGGCGCCGAGAGCTGGAGAGGCACTGAGGTGCTTGCGGTGGAGCACGAGGCCGGAATTATGGCGTTCAACAATACGACGTTCGAGTTGCCGCCGGAGACGATCGCCGCCGGGGACGAGGTGGCGGCTAGTTTGGCGCCGGTGGTACAGACTGAGGACAAGCAAGAGGAGGAGGAAGAGAGTGAAGCAGAGAAAGATCCGTTTGCAGCTAGTGAGAAGATTAATCAACCTGAAGAATTGGTGACTGGATTCAAGAAGAATAAGGATCCTTCGGCGACGGATTTAACACTGGCATTGTCTACTCTTGAGGTGACGACATTGCCCCCTGCAGAGGCCACACAGTCTACTCACATTGCGGTCGAAGGGTTTGAAGGGGAGTATGGTGGAATTGAGTTTGGGAATGAGCAGGCTTCTTTGAATGAGGCTTTTGAAGGGTTTTCGGATGCTTGGGGTGGTGGTTTGGATGCTTCTGAGTTCGTTGGCACAAAGAAGGTTGTGAAGTCGCAAGGGCTTGGTGGGCTTGAATTGTTGCAGACCGGACCGGATCCTCCTAAAGCTGCTGGTGCTGCTGCAGCAGGTACTCCTCTCGAGGAACTTGTAGGAAAAACTGAAATGAAGGGTCCTGAGATGAACATTGTGGAAGAGATCAATGTTGAGTTTAGGGAATCATTACTTGCTAGAGCAGCATTAAAGGGTGTTGTTTATTTGAAAACTTTGCCAACCAAAACTAGTGGTGATAAAGAAACTGAGTTTTCCTTCAGGGTTGAGGGAACCAGTGCAGTTAAAAGGTTTGTTATGCAGAATTCTCGAATTAGTAGTCTAGGCAATGGGATGTTTCATGTGAGAACTGCGGCCTCTGATGAGCCTTTACCCATTTTGAAGTATAGTTTGCAACCTAGGTTAACCCCATTGCCTTTGAGGGTTCGTCTTGTGCAACGTCACACAGGAAGCTTGCTGTCAGTGATGATACAATATGTGTCGAACCCTGAGTTGCCGGCACCTTTGACTGATGTCACATTTATTGTGAAACTGCCCCTTGACCCTACATTGCTGAAGGTCTCACCGAAAGCTGTATTAAATCGGTCTGAGAAAGAACTGAAATGGCATGTCCCTGAGATTCCGTTGAATGGACCGCCAGGTCGGTTGAGGGTGAGGATGCCTGTAGATTCTAATGAAGAAGATGGTGGTGAGGAGATTGAGGTTGTTGCCTATGTGAAATTTTCTTGGCAAGGAAACAGATCATTGTCTGGAGTTTGTCTGCGGCCAGCTTCTGAGGGTAAGACAGACTTTTATGAGGTTAATCACAGGTATGAGAGTGGGGTATATATGTGCAACCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
muHD

Protein Analysis

695

Amino Acids

75.71

Weight (kDa)

5.14

Isoelectric Point (pI)

50.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
muHD PF10291 458 - 670 1.7e-13 Muniscin C-terminal mu homology domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G57460
fragaria_vesca FvH4_5g27790
malus_domestica MD13G1254300.v1.1 MD13G1254800.v1.1 MD16G1258100.v1.1
prunus_persica Prupe.2G007900_v2.0.a1
pyrus_communis pycom16g22240 pycom16g22250
rosa_chinensis RchiOBHm_Chr4g0402481
rosa_laevigata RLG00000009080
rosa_multiflora Rmu_co8490925.1_g000001 Rmu_ssc0000330.1_g000030
rosa_roxburghii Rroxscaffold_5G00347170
rosa_rugosa Rorug04G0035800
rosa_samantha Rh4AG113000 Rh4BG105600 Rh4CG120000 Rh4DG105000
rosa_wichuraiana Rw4G009070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1884
AatII GACGTC 1 cut(s) 585
Acc36I ACCTGC 1 cut(s) 1313
AccB1I GGYRCC 3 cut(s) 752, 883, 1744
AccI GTMKAC 3 cut(s) 579, 1046, 1091
AccII CGCG 3 cut(s) 270, 441, 573
AcoI YGGCCR 2 cut(s) 406, 2009
AcsI RAATTY 3 cut(s) 6, 1549, 1964
AcuI CTGAAG 3 cut(s) 999, 1489, 1820
AcyI GRCGYC 6 cut(s) 423, 576, 582, 651, 753, 884
AfaI GTAC 4 cut(s) 449, 611, 894, 1327
AfiI CCNNNNNNNGG 7 cut(s) 130, 194, 225, 670, 762, 1078, 1874
AgsI TTSAA 9 cut(s) 817, 1000, 1118, 1165, 1178, 1271, 1456, 1627, 1873
AhlI ACTAGT 1 cut(s) 1475
AjnI CCWGG 5 cut(s) 279, 453, 540, 666, 1882
AleI CACNNNNGTG 1 cut(s) 776
AluBI AGCT 8 cut(s) 412, 598, 762, 956, 1304, 1698, 1817, 2015
AluI AGCT 8 cut(s) 412, 598, 762, 956, 1304, 1698, 1817, 2015
Alw21I GWGCWC 1 cut(s) 795
Alw26I GTCTC 3 cut(s) 262, 839, 1810
AlwNI CAGNNNCTG 1 cut(s) 2018
Ama87I CYCGRG 4 cut(s) 219, 240, 476, 1334
AoxI GGCC 9 cut(s) 17, 237, 282, 406, 543, 798, 1080, 1599, 2009
ApeKI GCWGC 7 cut(s) 307, 953, 1304, 1313, 1316, 1319, 1430
ApoI RAATTY 3 cut(s) 6, 1549, 1964
ArsI GACNNNNNNTTYG 2 cut(s) 1549, 1581
AseI ATTAAT 1 cut(s) 969
AspA2I CCTAGG 1 cut(s) 1643
AspLEI GCGC 4 cut(s) 631, 727, 755, 886
AspS9I GGNCC 6 cut(s) 238, 715, 745, 1286, 1367, 1877
AsuC2I CCSGG 1 cut(s) 859
AvaI CYCGRG 4 cut(s) 219, 240, 476, 1334
AvaII GGWCC 5 cut(s) 715, 745, 1286, 1367, 1877
AvrII CCTAGG 1 cut(s) 1643
BamHI GGATCC 3 cut(s) 197, 1012, 1291
BanI GGYRCC 3 cut(s) 752, 883, 1744
BanII GRGCYC 1 cut(s) 247
BauI CACGAG 1 cut(s) 794
BbsI GAAGAC 2 cut(s) 62, 508
Bbv12I GWGCWC 1 cut(s) 795
BbvI GCAGC 7 cut(s) 319, 965, 1291, 1300, 1303, 1331, 1442
BccI CCATC 6 cut(s) 85, 374, 473, 515, 706, 1922
BceAI ACGGC 4 cut(s) 239, 530, 709, 715
BcgI CGANNNNNNTGC 6 cut(s) 514, 548, 686, 720, 1535, 1569
BciT130I CCWGG 5 cut(s) 281, 455, 542, 668, 1884
BcnI CCSGG 1 cut(s) 859
BcoDI GTCTC 3 cut(s) 262, 839, 1810
BcuI ACTAGT 1 cut(s) 1475
BfaI CTAG 6 cut(s) 876, 957, 1425, 1476, 1568, 1644
BfmI CTRYAG 3 cut(s) 1074, 1317, 1908
BfoI RGCGCY 4 cut(s) 632, 728, 756, 887
BfuAI ACCTGC 1 cut(s) 1313
BglII AGATCT 2 cut(s) 92, 618
BlnI CCTAGG 1 cut(s) 1643
BlpI GCTNAGC 1 cut(s) 169
Bme1390I CCNGG 6 cut(s) 281, 455, 542, 668, 859, 1884
Bme18I GGWCC 5 cut(s) 715, 745, 1286, 1367, 1877
BmeT110I CYCGRG 4 cut(s) 219, 240, 476, 1334
BmgT120I GGNCC 6 cut(s) 238, 715, 745, 1286, 1367, 1877
BmiI GGNNCC 9 cut(s) 199, 230, 754, 885, 1014, 1293, 1368, 1519, 1746
BmrFI CCNGG 6 cut(s) 281, 455, 542, 668, 859, 1884
BmsI GCATC 6 cut(s) 534, 666, 678, 1180, 1201, 1893
BoxI GACNNNNGTC 1 cut(s) 1757
BpiI GAAGAC 2 cut(s) 62, 508
BpmI CTGGAG 3 cut(s) 385, 784, 2016
Bpu1102I GCTNAGC 1 cut(s) 169
BpuEI CTTGAG 1 cut(s) 1073
BpuMI CCSGG 1 cut(s) 859
BsaBI GATNNNNATC 1 cut(s) 36
BsaHI GRCGYC 6 cut(s) 423, 576, 582, 651, 753, 884
BsaI GGTCTC 1 cut(s) 1810
BsaJI CCNNGG 8 cut(s) 124, 376, 475, 571, 646, 748, 858, 1643
BsaWI WCCGGW 2 cut(s) 1283, 1288
BsaXI ACNNNNNCTCC 4 cut(s) 335, 365, 488, 518
Bsc4I CCNNNNNNNGG 7 cut(s) 130, 194, 225, 670, 762, 1078, 1874
Bse118I RCCGGY 2 cut(s) 886, 1741
Bse1I ACTGG 4 cut(s) 149, 997, 1041, 1521
Bse3DI GCAATG 6 cut(s) 702, 1064, 1098, 1579, 1655, 1793
Bse8I GATNNNNATC 1 cut(s) 36
BseBI CCWGG 5 cut(s) 281, 455, 542, 668, 1884
BseDI CCNNGG 8 cut(s) 124, 376, 475, 571, 646, 748, 858, 1643
BseGI GGATG 7 cut(s) 204, 525, 660, 1195, 1216, 1584, 1908
BseJI GATNNNNATC 1 cut(s) 36
BseLI CCNNNNNNNGG 7 cut(s) 130, 194, 225, 670, 762, 1078, 1874
BseMI GCAATG 6 cut(s) 702, 1064, 1098, 1579, 1655, 1793
BseNI ACTGG 4 cut(s) 149, 997, 1041, 1521
BseRI GAGGAG 6 cut(s) 250, 343, 929, 932, 1320, 1952
BseXI GCAGC 7 cut(s) 319, 965, 1291, 1300, 1303, 1331, 1442
BsgI GTGCAG 1 cut(s) 1545
Bsh1236I CGCG 3 cut(s) 270, 441, 573
Bsh1285I CGRYCG 2 cut(s) 852, 1107
BshFI GGCC 9 cut(s) 19, 239, 284, 408, 545, 800, 1082, 1601, 2011
BshNI GGYRCC 3 cut(s) 752, 883, 1744
BsiEI CGRYCG 2 cut(s) 852, 1107
BsiHKAI GWGCWC 1 cut(s) 795
BsiHKCI CYCGRG 4 cut(s) 219, 240, 476, 1334
BsiSI CCGG 9 cut(s) 236, 590, 801, 842, 858, 887, 1284, 1289, 1742
BslFI GGGAC 2 cut(s) 875, 1841
BslI CCNNNNNNNGG 7 cut(s) 130, 194, 225, 670, 762, 1078, 1874
BsmAI GTCTC 3 cut(s) 262, 839, 1810
BsmBI CGTCTC 2 cut(s) 262, 839
BsmFI GGGAC 2 cut(s) 875, 1841
BsnI GGCC 9 cut(s) 19, 239, 284, 408, 545, 800, 1082, 1601, 2011
Bso31I GGTCTC 1 cut(s) 1810
BsoBI CYCGRG 4 cut(s) 219, 240, 476, 1334
Bsp1286I GDGCHC 2 cut(s) 247, 795
Bsp1720I GCTNAGC 1 cut(s) 169
BspANI GGCC 9 cut(s) 19, 239, 284, 408, 545, 800, 1082, 1601, 2011
BspFNI CGCG 3 cut(s) 270, 441, 573
BspLI GGNNCC 9 cut(s) 199, 230, 754, 885, 1014, 1293, 1368, 1519, 1746
BspMAI CTGCAG 2 cut(s) 1078, 1321
BspMI ACCTGC 1 cut(s) 1313
BspT107I GGYRCC 3 cut(s) 752, 883, 1744
BspTNI GGTCTC 1 cut(s) 1810
BsrDI GCAATG 6 cut(s) 702, 1064, 1098, 1579, 1655, 1793
BsrFI RCCGGY 2 cut(s) 886, 1741
BsrI ACTGG 4 cut(s) 149, 997, 1041, 1521
BssAI RCCGGY 2 cut(s) 886, 1741
BssECI CCNNGG 8 cut(s) 124, 376, 475, 571, 646, 748, 858, 1643
BssNI GRCGYC 6 cut(s) 423, 576, 582, 651, 753, 884
BssSI CACGAG 1 cut(s) 794
BssT1I CCWWGG 1 cut(s) 1643
Bst2BI CACGAG 1 cut(s) 794
Bst2UI CCWGG 5 cut(s) 281, 455, 542, 668, 1884
Bst4CI ACNGT 2 cut(s) 125, 1089
Bst6I CTCTTC 3 cut(s) 108, 918, 1383
BstACI GRCGYC 6 cut(s) 423, 576, 582, 651, 753, 884
BstC8I GCNNGC 9 cut(s) 410, 568, 600, 604, 783, 1155, 1700, 1743, 2013
BstDSI CCRYGG 3 cut(s) 124, 571, 646
BstF5I GGATG 7 cut(s) 204, 525, 660, 1195, 1216, 1584, 1908
BstFNI CGCG 3 cut(s) 270, 441, 573
BstH2I RGCGCY 4 cut(s) 632, 728, 756, 887
BstHHI GCGC 4 cut(s) 631, 727, 755, 886
BstMAI GTCTC 3 cut(s) 262, 839, 1810
BstMCI CGRYCG 2 cut(s) 852, 1107
BstNI CCWGG 5 cut(s) 281, 455, 542, 668, 1884
BstNSI RCATGY 1 cut(s) 1856
BstPAI GACNNNNGTC 1 cut(s) 1757
BstSCI CCNGG 6 cut(s) 279, 453, 540, 666, 857, 1882
BstSFI CTRYAG 3 cut(s) 1074, 1317, 1908
BstUI CGCG 3 cut(s) 270, 441, 573
BstV1I GCAGC 7 cut(s) 319, 965, 1291, 1300, 1303, 1331, 1442
BstV2I GAAGAC 2 cut(s) 62, 508
BstX2I RGATCY 8 cut(s) 92, 133, 145, 197, 618, 943, 1012, 1291
BstYI RGATCY 8 cut(s) 92, 133, 145, 197, 618, 943, 1012, 1291
BsuRI GGCC 9 cut(s) 19, 239, 284, 408, 545, 800, 1082, 1601, 2011
BtgI CCRYGG 3 cut(s) 124, 571, 646
BtgZI GCGATG 2 cut(s) 352, 689
BtsCI GGATG 7 cut(s) 204, 525, 660, 1195, 1216, 1584, 1908
BtsIMutI CAGTG 4 cut(s) 771, 1034, 1528, 1713
BveI ACCTGC 1 cut(s) 1313
Cac8I GCNNGC 9 cut(s) 410, 568, 600, 604, 783, 1155, 1700, 1743, 2013
CaiI CAGNNNCTG 1 cut(s) 2018
CfoI GCGC 4 cut(s) 631, 727, 755, 886
Cfr10I RCCGGY 2 cut(s) 886, 1741
Cfr13I GGNCC 6 cut(s) 238, 715, 745, 1286, 1367, 1877
Cfr42I CCGCGG 1 cut(s) 574
CpoI CGGWCCG 1 cut(s) 1286
CseI GACGC 5 cut(s) 412, 430, 541, 565, 640
Csp6I GTAC 4 cut(s) 448, 610, 893, 1326
CspCI CAANNNNNGTGG 2 cut(s) 1459, 1494
CspI CGGWCCG 1 cut(s) 1286
CviAII CATG 5 cut(s) 160, 625, 1586, 1853, 2085
CviQI GTAC 4 cut(s) 448, 610, 893, 1326
DinI GGCGCC 2 cut(s) 754, 885
DrdI GACNNNNNNGTC 1 cut(s) 1884
DseDI GACNNNNNNGTC 1 cut(s) 1884
EaeI YGGCCR 2 cut(s) 406, 2009
Eam1104I CTCTTC 3 cut(s) 108, 918, 1383
EarI CTCTTC 3 cut(s) 108, 918, 1383
EciI GGCGGA 2 cut(s) 346, 653
Eco130I CCWWGG 1 cut(s) 1643
Eco147I AGGCCT 1 cut(s) 19
Eco24I GRGCYC 1 cut(s) 247
Eco31I GGTCTC 1 cut(s) 1810
Eco47I GGWCC 5 cut(s) 715, 745, 1286, 1367, 1877
Eco57I CTGAAG 3 cut(s) 999, 1489, 1820
Eco88I CYCGRG 4 cut(s) 219, 240, 476, 1334
EcoO109I RGGNCCY 1 cut(s) 1367
EcoRI GAATTC 1 cut(s) 1549
EcoRII CCWGG 5 cut(s) 279, 453, 540, 666, 1882
EcoT14I CCWWGG 1 cut(s) 1643
EcoT38I GRGCYC 1 cut(s) 247
EgeI GGCGCC 2 cut(s) 754, 885
EheI GGCGCC 2 cut(s) 754, 885
ErhI CCWWGG 1 cut(s) 1643
Esp3I CGTCTC 2 cut(s) 262, 839
FaeI CATG 5 cut(s) 163, 628, 1589, 1856, 2088
FalI AAGNNNNNCTT 2 cut(s) 2018, 2050
FaqI GGGAC 2 cut(s) 875, 1841
FatI CATG 5 cut(s) 159, 624, 1585, 1852, 2084
FauI CCCGC 3 cut(s) 196, 284, 611
FblI GTMKAC 3 cut(s) 579, 1046, 1091
FokI GGATG 7 cut(s) 191, 512, 647, 1202, 1223, 1591, 1915
FriOI GRGCYC 1 cut(s) 247
FspBI CTAG 6 cut(s) 876, 957, 1425, 1476, 1568, 1644
GlaI GCGC 4 cut(s) 630, 726, 754, 885
GsuI CTGGAG 3 cut(s) 385, 784, 2016
HaeII RGCGCY 4 cut(s) 632, 728, 756, 887
HaeIII GGCC 9 cut(s) 19, 239, 284, 408, 545, 800, 1082, 1601, 2011
HapII CCGG 9 cut(s) 236, 590, 801, 842, 858, 887, 1284, 1289, 1742
HgaI GACGC 5 cut(s) 412, 430, 541, 565, 640
HhaI GCGC 4 cut(s) 631, 727, 755, 886
Hin1I GRCGYC 6 cut(s) 423, 576, 582, 651, 753, 884
Hin1II CATG 5 cut(s) 163, 628, 1589, 1856, 2088
Hin6I GCGC 4 cut(s) 629, 725, 753, 884
HinP1I GCGC 4 cut(s) 629, 725, 753, 884
HincII GTYRAC 3 cut(s) 538, 580, 1650
HindII GTYRAC 3 cut(s) 538, 580, 1650
HindIII AAGCTT 1 cut(s) 1696
HinfI GANTC 7 cut(s) 83, 350, 362, 996, 1412, 1864, 1913
HpaI GTTAAC 1 cut(s) 1650
HpaII CCGG 9 cut(s) 236, 590, 801, 842, 858, 887, 1284, 1289, 1742
Hpy166II GTNNAC 8 cut(s) 448, 460, 538, 580, 718, 1047, 1092, 1650
Hpy188III TCNNGA 8 cut(s) 427, 478, 1000, 1052, 1334, 1370, 1554, 1995
Hpy8I GTNNAC 8 cut(s) 448, 460, 538, 580, 718, 1047, 1092, 1650
HpyCH4III ACNGT 2 cut(s) 125, 1089
HpyCH4IV ACGT 7 cut(s) 67, 110, 471, 513, 582, 827, 1684
HpySE526I ACGT 7 cut(s) 67, 110, 471, 513, 582, 827, 1684
Hsp92I GRCGYC 6 cut(s) 423, 576, 582, 651, 753, 884
Hsp92II CATG 5 cut(s) 163, 628, 1589, 1856, 2088
HspAI GCGC 4 cut(s) 629, 725, 753, 884
KasI GGCGCC 2 cut(s) 752, 883
KroI GCCGGC 1 cut(s) 1741
KroNI GCCGGC 1 cut(s) 1743
KspAI GTTAAC 1 cut(s) 1650
KspI CCGCGG 1 cut(s) 574
LmnI GCTCC 2 cut(s) 216, 790
Lsp1109I GCAGC 7 cut(s) 319, 965, 1291, 1300, 1303, 1331, 1442
LweI GCATC 6 cut(s) 534, 666, 678, 1180, 1201, 1893
MaeI CTAG 6 cut(s) 876, 957, 1425, 1476, 1568, 1644
MaeII ACGT 7 cut(s) 67, 110, 471, 513, 582, 827, 1684
MaeIII GTNAC 6 cut(s) 559, 583, 988, 1057, 1685, 1759
MflI RGATCY 8 cut(s) 92, 133, 145, 197, 618, 943, 1012, 1291
MhlI GDGCHC 2 cut(s) 247, 795
MluCI AATT 9 cut(s) 6, 26, 804, 983, 1134, 1271, 1549, 1557, 1964
Mly113I GGCGCC 2 cut(s) 753, 884
MlyI GAGTC 2 cut(s) 92, 344
MmeI TCCRAC 3 cut(s) 208, 225, 372
MroNI GCCGGC 1 cut(s) 1741
MseI TTAA 8 cut(s) 24, 969, 1031, 1436, 1530, 1649, 1823, 2046
MslI CAYNNNNRTG 2 cut(s) 776, 2055
MspA1I CMGCKG 2 cut(s) 405, 573
MspI CCGG 9 cut(s) 236, 590, 801, 842, 858, 887, 1284, 1289, 1742
MspR9I CCNGG 6 cut(s) 281, 455, 542, 668, 859, 1884
MvaI CCWGG 5 cut(s) 281, 455, 542, 668, 1884
MvnI CGCG 3 cut(s) 270, 441, 573
NaeI GCCGGC 1 cut(s) 1743
NarI GGCGCC 2 cut(s) 753, 884
NciI CCSGG 1 cut(s) 859
NgoMIV GCCGGC 1 cut(s) 1741
NlaIII CATG 5 cut(s) 163, 628, 1589, 1856, 2088
NlaIV GGNNCC 9 cut(s) 199, 230, 754, 885, 1014, 1293, 1368, 1519, 1746
NmeAIII GCCGAG 4 cut(s) 357, 640, 701, 781
NmuCI GTSAC 6 cut(s) 559, 583, 988, 1057, 1685, 1759
NspI RCATGY 1 cut(s) 1856
OliI CACNNNNGTG 1 cut(s) 776
PaeR7I CTCGAG 1 cut(s) 1334
PceI AGGCCT 1 cut(s) 19
PcsI WCGNNNNNNNCGW 1 cut(s) 423
PdiI GCCGGC 1 cut(s) 1743
PfeI GAWTC 5 cut(s) 362, 996, 1412, 1864, 1913
PflFI GACNNNGTC 1 cut(s) 638
Ple19I CGATCG 1 cut(s) 852
PleI GAGTC 2 cut(s) 91, 344
PluTI GGCGCC 2 cut(s) 756, 887
PpsI GAGTC 2 cut(s) 91, 344
PpuMI RGGWCCY 1 cut(s) 1367
PshAI GACNNNNGTC 1 cut(s) 1757
PshBI ATTAAT 1 cut(s) 969
Psp5II RGGWCCY 1 cut(s) 1367
Psp6I CCWGG 5 cut(s) 279, 453, 540, 666, 1882
PspGI CCWGG 5 cut(s) 279, 453, 540, 666, 1882
PspN4I GGNNCC 9 cut(s) 199, 230, 754, 885, 1014, 1293, 1368, 1519, 1746
PspPI GGNCC 6 cut(s) 238, 715, 745, 1286, 1367, 1877
PspPPI RGGWCCY 1 cut(s) 1367
PsrI GAACNNNNNNTAC 2 cut(s) 452, 484
PstI CTGCAG 2 cut(s) 1078, 1321
PstNI CAGNNNCTG 1 cut(s) 2018
PsuI RGATCY 8 cut(s) 92, 133, 145, 197, 618, 943, 1012, 1291
PsyI GACNNNGTC 1 cut(s) 638
PvuI CGATCG 1 cut(s) 852
RsaI GTAC 4 cut(s) 449, 611, 894, 1327
RsaNI GTAC 4 cut(s) 448, 610, 893, 1326
RseI CAYNNNNRTG 2 cut(s) 776, 2055
Rsr2I CGGWCCG 1 cut(s) 1286
RsrII CGGWCCG 1 cut(s) 1286
SacII CCGCGG 1 cut(s) 574
SalI GTCGAC 1 cut(s) 578
SaqAI TTAA 8 cut(s) 24, 969, 1031, 1436, 1530, 1649, 1823, 2046
Sau96I GGNCC 6 cut(s) 238, 715, 745, 1286, 1367, 1877
SchI GAGTC 2 cut(s) 92, 344
ScrFI CCNGG 6 cut(s) 281, 455, 542, 668, 859, 1884
SduI GDGCHC 2 cut(s) 247, 795
SfaNI GCATC 6 cut(s) 534, 666, 678, 1180, 1201, 1893
SfcI CTRYAG 3 cut(s) 1074, 1317, 1908
SfoI GGCGCC 2 cut(s) 754, 885
Sfr274I CTCGAG 1 cut(s) 1334
Sfr303I CCGCGG 1 cut(s) 574
SgrAI CRCCGGYG 1 cut(s) 886
SgrBI CCGCGG 1 cut(s) 574
SgrDI CGTCGACG 1 cut(s) 578
SinI GGWCC 5 cut(s) 715, 745, 1286, 1367, 1877
SlaI CTCGAG 1 cut(s) 1334
SmiMI CAYNNNNRTG 2 cut(s) 776, 2055
SmlI CTYRAG 2 cut(s) 1052, 1334
SmoI CTYRAG 2 cut(s) 1052, 1334
SpeI ACTAGT 1 cut(s) 1475
Sse9I AATT 9 cut(s) 6, 26, 804, 983, 1134, 1271, 1549, 1557, 1964
SseBI AGGCCT 1 cut(s) 19
SspDI GGCGCC 2 cut(s) 752, 883
SspMI CTAG 6 cut(s) 876, 957, 1425, 1476, 1568, 1644
StuI AGGCCT 1 cut(s) 19
StyD4I CCNGG 6 cut(s) 279, 453, 540, 666, 857, 1882
StyI CCWWGG 1 cut(s) 1643
TaaI ACNGT 2 cut(s) 125, 1089
TaiI ACGT 7 cut(s) 70, 113, 474, 516, 585, 830, 1687
TaqII GACCGA 1 cut(s) 1818
TasI AATT 9 cut(s) 6, 26, 804, 983, 1134, 1271, 1549, 1557, 1964
TfiI GAWTC 5 cut(s) 362, 996, 1412, 1864, 1913
Tru1I TTAA 8 cut(s) 24, 969, 1031, 1436, 1530, 1649, 1823, 2046
Tru9I TTAA 8 cut(s) 24, 969, 1031, 1436, 1530, 1649, 1823, 2046
TscAI CASTG 4 cut(s) 778, 1041, 1528, 1713
TseFI GTSAC 6 cut(s) 559, 583, 988, 1057, 1685, 1759
TseI GCWGC 7 cut(s) 307, 953, 1304, 1313, 1316, 1319, 1430
Tsp45I GTSAC 6 cut(s) 559, 583, 988, 1057, 1685, 1759
TspDTI ATGAA 4 cut(s) 1376, 1391, 1574, 1935
TspGWI ACGGA 4 cut(s) 635, 936, 1040, 1857
TspRI CASTG 4 cut(s) 778, 1041, 1528, 1713
Tth111I GACNNNGTC 1 cut(s) 638
VpaK11BI GGWCC 5 cut(s) 715, 745, 1286, 1367, 1877
VspI ATTAAT 1 cut(s) 969
XapI RAATTY 3 cut(s) 6, 1549, 1964
XceI RCATGY 1 cut(s) 1856
XcmI CCANNNNNNNNNTGG 1 cut(s) 191
XhoI CTCGAG 1 cut(s) 1334
XmaJI CCTAGG 1 cut(s) 1643
XmiI GTMKAC 3 cut(s) 579, 1046, 1091
XspI CTAG 6 cut(s) 876, 957, 1425, 1476, 1568, 1644
ZraI GACGTC 1 cut(s) 583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.