Rmu_co8490925.1_g000001

Muniscin C-terminal mu homology domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8490925.1
Physical Location & Seq
Reverse (-)
2 .. 1235
1234 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8490925.1_g000001.1.cds

Sequence Viewer

Length: 1234 bp
atgtcttgcttagccctctctctccaacccgccaatggatccgacatcctgctccaaacccgagaatggttccctccggcccgagccctcgtcgccgtctcctccttccgcgaaacccgcctcgccttcgccgcctcaaagcaacagcagcaactccacaaccagagcaaagaccacgccaacaactctgactcctccgccgattccatcgcctccctcggcgacgaccccctcgccgcctccagcggccagctcatcgtcggcgtcgagagccgcttccgcgtcgtgtaccgcctggtgaactccatctacgtcctcgggatcaccaccgccgaccacgacaactccatcaacgtcttcgagtgcatccacatcgtcaaccaggccgtcagcgtcgtcgtcactgcctgccgcggcgttgacgtcacgccggagaagctcgcccgcaagtacgccgagatctacatggcgctcgacatcgtcctccgcggcgtcagcaacatccgcctggcggcgatgctgtcgtcgatgcacggcgacggcattgccaagatggtgcactcggcgctggacaccgagaacaaggtccgaggcgccgagagctggagaggcattgaggtgcttgcggtggagcacgaggccggaattatggcgttcaacaatacgacgttcgagttgccgccggagacgatcgccgccggggacgaggtggcggcgagtctggcgccggtggtacagaccgaggacaagcaagaggaggaggaagagagtgaagcagagaaagatccgtttgcagctagtgagaagattaatcaacctgaagaattggtgactggattcaagaagaataaggatccttccgcgacggatttaacactggcattgtctactcttgaggtgacgacattgccccctgcagaggccacacagtctactcacattgcggtcgaagggtttgaaggggagtatggtgggattgagtttgggaatgagcaggcttctttgaatgaggcttttgaagggttttcggatgcttggggtggtggtttggatgcttctgagttcgttggcacaaagaaggttgtgaagtcgcaggggcttggtgggcttgaattgttgcagaccggaccggatcctcctaaagctgctggtgctgctgcagcaggtactcctctcgaggaacttgtaggaaaaactgaaatgaagggtcctgagatgaacattgtggaagaga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

411

Amino Acids

43.78

Weight (kDa)

4.57

Isoelectric Point (pI)

49.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012011)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 426
Acc36I ACCTGC 1 cut(s) 1154
AccB1I GGYRCC 2 cut(s) 593, 724
AccI GTMKAC 2 cut(s) 887, 932
AccII CGCG 5 cut(s) 111, 282, 414, 489, 863
AclWI GGATC 8 cut(s) 33, 46, 329, 779, 848, 861, 1127, 1140
AcoI YGGCCR 1 cut(s) 247
AcuI CTGAAG 1 cut(s) 840
AcyI GRCGYC 5 cut(s) 264, 423, 492, 594, 725
AfaI GTAC 4 cut(s) 290, 452, 735, 1168
AfiI CCNNNNNNNGG 5 cut(s) 35, 66, 511, 603, 919
AgsI TTSAA 6 cut(s) 658, 841, 959, 1006, 1019, 1112
AjnI CCWGG 3 cut(s) 294, 381, 507
AluBI AGCT 5 cut(s) 253, 439, 603, 797, 1145
AluI AGCT 5 cut(s) 253, 439, 603, 797, 1145
Alw21I GWGCWC 2 cut(s) 561, 636
Alw26I GTCTC 2 cut(s) 103, 680
Alw44I GTGCAC 1 cut(s) 557
AlwI GGATC 8 cut(s) 33, 46, 329, 779, 848, 861, 1127, 1140
Ama87I CYCGRG 4 cut(s) 60, 81, 317, 1175
AoxI GGCC 5 cut(s) 78, 247, 384, 639, 921
ApaLI GTGCAC 1 cut(s) 557
ApeKI GCWGC 6 cut(s) 148, 794, 1145, 1154, 1157, 1160
AseI ATTAAT 1 cut(s) 810
AspLEI GCGC 4 cut(s) 472, 568, 596, 727
AspS9I GGNCC 4 cut(s) 79, 586, 1127, 1208
AsuC2I CCSGG 1 cut(s) 700
AsuHPI GGTGA 4 cut(s) 310, 316, 841, 910
AvaI CYCGRG 4 cut(s) 60, 81, 317, 1175
AvaII GGWCC 3 cut(s) 586, 1127, 1208
BaeGI GKGCMC 1 cut(s) 561
BamHI GGATCC 3 cut(s) 38, 853, 1132
BanI GGYRCC 2 cut(s) 593, 724
BanII GRGCYC 1 cut(s) 88
BauI CACGAG 1 cut(s) 635
BbsI GAAGAC 1 cut(s) 349
Bbv12I GWGCWC 2 cut(s) 561, 636
BbvI GCAGC 6 cut(s) 160, 806, 1132, 1141, 1144, 1172
BccI CCATC 4 cut(s) 215, 314, 356, 547
BceAI ACGGC 4 cut(s) 80, 371, 550, 556
BcgI CGANNNNNNTGC 4 cut(s) 355, 389, 527, 561
BciT130I CCWGG 3 cut(s) 296, 383, 509
BcnI CCSGG 1 cut(s) 700
BcoDI GTCTC 2 cut(s) 103, 680
BfaI CTAG 1 cut(s) 798
BfmI CTRYAG 2 cut(s) 915, 1158
BfoI RGCGCY 4 cut(s) 473, 569, 597, 728
BfuAI ACCTGC 1 cut(s) 1154
BglII AGATCT 1 cut(s) 459
BlpI GCTNAGC 1 cut(s) 10
Bme1390I CCNGG 4 cut(s) 296, 383, 509, 700
Bme18I GGWCC 3 cut(s) 586, 1127, 1208
BmeT110I CYCGRG 4 cut(s) 60, 81, 317, 1175
BmgT120I GGNCC 4 cut(s) 79, 586, 1127, 1208
BmiI GGNNCC 7 cut(s) 40, 71, 595, 726, 855, 1134, 1209
BmrFI CCNGG 4 cut(s) 296, 383, 509, 700
BmsI GCATC 5 cut(s) 375, 507, 519, 1021, 1042
BpiI GAAGAC 1 cut(s) 349
BpmI CTGGAG 2 cut(s) 226, 625
Bpu1102I GCTNAGC 1 cut(s) 10
BpuEI CTTGAG 1 cut(s) 914
BpuMI CCSGG 1 cut(s) 700
BsaHI GRCGYC 5 cut(s) 264, 423, 492, 594, 725
BsaJI CCNNGG 7 cut(s) 217, 316, 412, 487, 589, 699, 741
BsaWI WCCGGW 2 cut(s) 1124, 1129
BsaXI ACNNNNNCTCC 4 cut(s) 176, 206, 329, 359
Bsc4I CCNNNNNNNGG 5 cut(s) 35, 66, 511, 603, 919
Bse118I RCCGGY 1 cut(s) 727
Bse1I ACTGG 2 cut(s) 838, 882
Bse3DI GCAATG 3 cut(s) 543, 905, 939
BseBI CCWGG 3 cut(s) 296, 383, 509
BseDI CCNNGG 7 cut(s) 217, 316, 412, 487, 589, 699, 741
BseGI GGATG 5 cut(s) 45, 366, 501, 1036, 1057
BseLI CCNNNNNNNGG 5 cut(s) 35, 66, 511, 603, 919
BseMI GCAATG 3 cut(s) 543, 905, 939
BseMII CTCAG 2 cut(s) 1050, 1203
BseNI ACTGG 2 cut(s) 838, 882
BseRI GAGGAG 5 cut(s) 91, 184, 770, 773, 1161
BseSI GKGCMC 1 cut(s) 561
BseXI GCAGC 6 cut(s) 160, 806, 1132, 1141, 1144, 1172
Bsh1236I CGCG 5 cut(s) 111, 282, 414, 489, 863
Bsh1285I CGRYCG 2 cut(s) 693, 948
BshFI GGCC 5 cut(s) 80, 249, 386, 641, 923
BshNI GGYRCC 2 cut(s) 593, 724
BsiEI CGRYCG 2 cut(s) 693, 948
BsiHKAI GWGCWC 2 cut(s) 561, 636
BsiHKCI CYCGRG 4 cut(s) 60, 81, 317, 1175
BsiSI CCGG 8 cut(s) 77, 431, 642, 683, 699, 728, 1125, 1130
BslFI GGGAC 1 cut(s) 716
BslI CCNNNNNNNGG 5 cut(s) 35, 66, 511, 603, 919
BsmAI GTCTC 2 cut(s) 103, 680
BsmBI CGTCTC 2 cut(s) 103, 680
BsmFI GGGAC 1 cut(s) 716
BsnI GGCC 5 cut(s) 80, 249, 386, 641, 923
BsoBI CYCGRG 4 cut(s) 60, 81, 317, 1175
Bsp1286I GDGCHC 3 cut(s) 88, 561, 636
Bsp143I GATC 7 cut(s) 38, 321, 459, 690, 784, 853, 1132
Bsp1720I GCTNAGC 1 cut(s) 10
BspANI GGCC 5 cut(s) 80, 249, 386, 641, 923
BspCNI CTCAG 2 cut(s) 1051, 1204
BspFNI CGCG 5 cut(s) 111, 282, 414, 489, 863
BspLI GGNNCC 7 cut(s) 40, 71, 595, 726, 855, 1134, 1209
BspMAI CTGCAG 2 cut(s) 919, 1162
BspMI ACCTGC 1 cut(s) 1154
BspPI GGATC 8 cut(s) 33, 46, 329, 779, 848, 861, 1127, 1140
BspT107I GGYRCC 2 cut(s) 593, 724
BsrDI GCAATG 3 cut(s) 543, 905, 939
BsrFI RCCGGY 1 cut(s) 727
BsrI ACTGG 2 cut(s) 838, 882
BssAI RCCGGY 1 cut(s) 727
BssECI CCNNGG 7 cut(s) 217, 316, 412, 487, 589, 699, 741
BssMI GATC 7 cut(s) 38, 321, 459, 690, 784, 853, 1132
BssNI GRCGYC 5 cut(s) 264, 423, 492, 594, 725
BssSI CACGAG 1 cut(s) 635
Bst2BI CACGAG 1 cut(s) 635
Bst2UI CCWGG 3 cut(s) 296, 383, 509
Bst4CI ACNGT 1 cut(s) 930
Bst6I CTCTTC 2 cut(s) 759, 1224
BstACI GRCGYC 5 cut(s) 264, 423, 492, 594, 725
BstC8I GCNNGC 6 cut(s) 251, 409, 441, 445, 624, 996
BstDEI CTNAG 3 cut(s) 10, 1059, 1212
BstDSI CCRYGG 2 cut(s) 412, 487
BstF5I GGATG 5 cut(s) 45, 366, 501, 1036, 1057
BstFNI CGCG 5 cut(s) 111, 282, 414, 489, 863
BstH2I RGCGCY 4 cut(s) 473, 569, 597, 728
BstHHI GCGC 4 cut(s) 472, 568, 596, 727
BstKTI GATC 7 cut(s) 41, 324, 462, 693, 787, 856, 1135
BstMAI GTCTC 2 cut(s) 103, 680
BstMBI GATC 7 cut(s) 38, 321, 459, 690, 784, 853, 1132
BstMCI CGRYCG 2 cut(s) 693, 948
BstNI CCWGG 3 cut(s) 296, 383, 509
BstSCI CCNGG 4 cut(s) 294, 381, 507, 698
BstSFI CTRYAG 2 cut(s) 915, 1158
BstSLI GKGCMC 1 cut(s) 561
BstUI CGCG 5 cut(s) 111, 282, 414, 489, 863
BstV1I GCAGC 6 cut(s) 160, 806, 1132, 1141, 1144, 1172
BstV2I GAAGAC 1 cut(s) 349
BstX2I RGATCY 5 cut(s) 38, 459, 784, 853, 1132
BstYI RGATCY 5 cut(s) 38, 459, 784, 853, 1132
BsuRI GGCC 5 cut(s) 80, 249, 386, 641, 923
BtgI CCRYGG 2 cut(s) 412, 487
BtgZI GCGATG 2 cut(s) 193, 530
BtsCI GGATG 5 cut(s) 45, 366, 501, 1036, 1057
BtsI GCAGTG 1 cut(s) 402
BtsIMutI CAGTG 2 cut(s) 402, 875
BveI ACCTGC 1 cut(s) 1154
Cac8I GCNNGC 6 cut(s) 251, 409, 441, 445, 624, 996
CfoI GCGC 4 cut(s) 472, 568, 596, 727
Cfr10I RCCGGY 1 cut(s) 727
Cfr13I GGNCC 4 cut(s) 79, 586, 1127, 1208
Cfr42I CCGCGG 2 cut(s) 415, 490
CpoI CGGWCCG 1 cut(s) 1127
CseI GACGC 4 cut(s) 253, 271, 382, 481
Csp6I GTAC 4 cut(s) 289, 451, 734, 1167
CspI CGGWCCG 1 cut(s) 1127
CviAII CATG 1 cut(s) 466
CviQI GTAC 4 cut(s) 289, 451, 734, 1167
DdeI CTNAG 3 cut(s) 10, 1059, 1212
DinI GGCGCC 2 cut(s) 595, 726
DpnI GATC 7 cut(s) 40, 323, 461, 692, 786, 855, 1134
DpnII GATC 7 cut(s) 38, 321, 459, 690, 784, 853, 1132
EaeI YGGCCR 1 cut(s) 247
Eam1104I CTCTTC 2 cut(s) 759, 1224
EarI CTCTTC 2 cut(s) 759, 1224
EciI GGCGGA 2 cut(s) 187, 494
Eco24I GRGCYC 1 cut(s) 88
Eco47I GGWCC 3 cut(s) 586, 1127, 1208
Eco57I CTGAAG 1 cut(s) 840
Eco88I CYCGRG 4 cut(s) 60, 81, 317, 1175
EcoO109I RGGNCCY 1 cut(s) 1208
EcoRII CCWGG 3 cut(s) 294, 381, 507
EcoT38I GRGCYC 1 cut(s) 88
EgeI GGCGCC 2 cut(s) 595, 726
EheI GGCGCC 2 cut(s) 595, 726
Esp3I CGTCTC 2 cut(s) 103, 680
FaeI CATG 1 cut(s) 469
FaiI YATR 3 cut(s) 467, 650, 969
FaqI GGGAC 1 cut(s) 716
FatI CATG 1 cut(s) 465
FauI CCCGC 3 cut(s) 37, 125, 452
FblI GTMKAC 2 cut(s) 887, 932
FokI GGATG 5 cut(s) 32, 353, 488, 1043, 1064
FriOI GRGCYC 1 cut(s) 88
FspBI CTAG 1 cut(s) 798
GlaI GCGC 4 cut(s) 471, 567, 595, 726
GsuI CTGGAG 2 cut(s) 226, 625
HaeII RGCGCY 4 cut(s) 473, 569, 597, 728
HaeIII GGCC 5 cut(s) 80, 249, 386, 641, 923
HapII CCGG 8 cut(s) 77, 431, 642, 683, 699, 728, 1125, 1130
HgaI GACGC 4 cut(s) 253, 271, 382, 481
HhaI GCGC 4 cut(s) 472, 568, 596, 727
Hin1I GRCGYC 5 cut(s) 264, 423, 492, 594, 725
Hin1II CATG 1 cut(s) 469
Hin6I GCGC 4 cut(s) 470, 566, 594, 725
HinP1I GCGC 4 cut(s) 470, 566, 594, 725
HincII GTYRAC 2 cut(s) 379, 421
HindII GTYRAC 2 cut(s) 379, 421
HinfI GANTC 4 cut(s) 191, 203, 718, 837
HpaII CCGG 8 cut(s) 77, 431, 642, 683, 699, 728, 1125, 1130
HphI GGTGA 4 cut(s) 310, 316, 841, 910
Hpy166II GTNNAC 7 cut(s) 289, 301, 379, 421, 559, 888, 933
Hpy188I TCNGA 5 cut(s) 43, 190, 590, 1030, 1060
Hpy188III TCNNGA 6 cut(s) 268, 319, 841, 893, 1175, 1211
Hpy8I GTNNAC 7 cut(s) 289, 301, 379, 421, 559, 888, 933
HpyAV CCTTC 8 cut(s) 115, 136, 867, 944, 953, 1013, 1072, 1198
HpyCH4III ACNGT 1 cut(s) 930
HpyCH4IV ACGT 4 cut(s) 312, 354, 423, 668
HpyCH4V TGCA 7 cut(s) 366, 532, 559, 794, 917, 1120, 1160
HpyF3I CTNAG 3 cut(s) 10, 1059, 1212
HpySE526I ACGT 4 cut(s) 312, 354, 423, 668
Hsp92I GRCGYC 5 cut(s) 264, 423, 492, 594, 725
Hsp92II CATG 1 cut(s) 469
HspAI GCGC 4 cut(s) 470, 566, 594, 725
KasI GGCGCC 2 cut(s) 593, 724
KspI CCGCGG 2 cut(s) 415, 490
Kzo9I GATC 7 cut(s) 38, 321, 459, 690, 784, 853, 1132
LmnI GCTCC 2 cut(s) 57, 631
Lsp1109I GCAGC 6 cut(s) 160, 806, 1132, 1141, 1144, 1172
LweI GCATC 5 cut(s) 375, 507, 519, 1021, 1042
MaeI CTAG 1 cut(s) 798
MaeII ACGT 4 cut(s) 312, 354, 423, 668
MaeIII GTNAC 4 cut(s) 400, 424, 829, 898
MalI GATC 7 cut(s) 40, 323, 461, 692, 786, 855, 1134
MboI GATC 7 cut(s) 38, 321, 459, 690, 784, 853, 1132
MboII GAAGA 5 cut(s) 349, 776, 817, 833, 856
MflI RGATCY 5 cut(s) 38, 459, 784, 853, 1132
MhlI GDGCHC 3 cut(s) 88, 561, 636
MluCI AATT 3 cut(s) 645, 824, 1112
Mly113I GGCGCC 2 cut(s) 594, 725
MlyI GAGTC 2 cut(s) 185, 727
MmeI TCCRAC 2 cut(s) 49, 66
MseI TTAA 2 cut(s) 810, 872
MslI CAYNNNNRTG 1 cut(s) 617
MspA1I CMGCKG 3 cut(s) 246, 414, 489
MspI CCGG 8 cut(s) 77, 431, 642, 683, 699, 728, 1125, 1130
MspR9I CCNGG 4 cut(s) 296, 383, 509, 700
MvaI CCWGG 3 cut(s) 296, 383, 509
MvnI CGCG 5 cut(s) 111, 282, 414, 489, 863
NarI GGCGCC 2 cut(s) 594, 725
NciI CCSGG 1 cut(s) 700
NdeII GATC 7 cut(s) 38, 321, 459, 690, 784, 853, 1132
NlaIII CATG 1 cut(s) 469
NlaIV GGNNCC 7 cut(s) 40, 71, 595, 726, 855, 1134, 1209
NmeAIII GCCGAG 4 cut(s) 198, 481, 542, 622
NmuCI GTSAC 4 cut(s) 400, 424, 829, 898
PaeR7I CTCGAG 1 cut(s) 1175
PcsI WCGNNNNNNNCGW 1 cut(s) 264
PfeI GAWTC 2 cut(s) 203, 837
PflFI GACNNNGTC 1 cut(s) 479
Ple19I CGATCG 1 cut(s) 693
PleI GAGTC 2 cut(s) 185, 726
PluTI GGCGCC 2 cut(s) 597, 728
PpsI GAGTC 2 cut(s) 185, 726
PpuMI RGGWCCY 1 cut(s) 1208
PshBI ATTAAT 1 cut(s) 810
Psp5II RGGWCCY 1 cut(s) 1208
Psp6I CCWGG 3 cut(s) 294, 381, 507
PspGI CCWGG 3 cut(s) 294, 381, 507
PspN4I GGNNCC 7 cut(s) 40, 71, 595, 726, 855, 1134, 1209
PspPI GGNCC 4 cut(s) 79, 586, 1127, 1208
PspPPI RGGWCCY 1 cut(s) 1208
PsrI GAACNNNNNNTAC 2 cut(s) 293, 325
PstI CTGCAG 2 cut(s) 919, 1162
PsuI RGATCY 5 cut(s) 38, 459, 784, 853, 1132
PsyI GACNNNGTC 1 cut(s) 479
PvuI CGATCG 1 cut(s) 693
RsaI GTAC 4 cut(s) 290, 452, 735, 1168
RsaNI GTAC 4 cut(s) 289, 451, 734, 1167
RseI CAYNNNNRTG 1 cut(s) 617
Rsr2I CGGWCCG 1 cut(s) 1127
RsrII CGGWCCG 1 cut(s) 1127
SacII CCGCGG 2 cut(s) 415, 490
SaqAI TTAA 2 cut(s) 810, 872
Sau3AI GATC 7 cut(s) 38, 321, 459, 690, 784, 853, 1132
Sau96I GGNCC 4 cut(s) 79, 586, 1127, 1208
SchI GAGTC 2 cut(s) 185, 727
ScrFI CCNGG 4 cut(s) 296, 383, 509, 700
SduI GDGCHC 3 cut(s) 88, 561, 636
SfaNI GCATC 5 cut(s) 375, 507, 519, 1021, 1042
SfcI CTRYAG 2 cut(s) 915, 1158
SfoI GGCGCC 2 cut(s) 595, 726
Sfr274I CTCGAG 1 cut(s) 1175
Sfr303I CCGCGG 2 cut(s) 415, 490
SgrAI CRCCGGYG 1 cut(s) 727
SgrBI CCGCGG 2 cut(s) 415, 490
SinI GGWCC 3 cut(s) 586, 1127, 1208
SlaI CTCGAG 1 cut(s) 1175
SmiMI CAYNNNNRTG 1 cut(s) 617
SmlI CTYRAG 2 cut(s) 893, 1175
SmoI CTYRAG 2 cut(s) 893, 1175
Sse9I AATT 3 cut(s) 645, 824, 1112
SspDI GGCGCC 2 cut(s) 593, 724
SspMI CTAG 1 cut(s) 798
StyD4I CCNGG 4 cut(s) 294, 381, 507, 698
TaaI ACNGT 1 cut(s) 930
TaiI ACGT 4 cut(s) 315, 357, 426, 671
TaqI TCGA 7 cut(s) 267, 360, 474, 527, 672, 948, 1176
TaqII GACCGA 1 cut(s) 755
TasI AATT 3 cut(s) 645, 824, 1112
TfiI GAWTC 2 cut(s) 203, 837
Tru1I TTAA 2 cut(s) 810, 872
Tru9I TTAA 2 cut(s) 810, 872
TscAI CASTG 2 cut(s) 409, 882
TseFI GTSAC 4 cut(s) 400, 424, 829, 898
TseI GCWGC 6 cut(s) 148, 794, 1145, 1154, 1157, 1160
Tsp45I GTSAC 4 cut(s) 400, 424, 829, 898
TspDTI ATGAA 2 cut(s) 1217, 1232
TspGWI ACGGA 2 cut(s) 777, 881
TspRI CASTG 2 cut(s) 409, 882
Tth111I GACNNNGTC 1 cut(s) 479
VneI GTGCAC 1 cut(s) 557
VpaK11BI GGWCC 3 cut(s) 586, 1127, 1208
VspI ATTAAT 1 cut(s) 810
XcmI CCANNNNNNNNNTGG 1 cut(s) 32
XhoI CTCGAG 1 cut(s) 1175
XmiI GTMKAC 2 cut(s) 887, 932
XspI CTAG 1 cut(s) 798
ZraI GACGTC 1 cut(s) 424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.