Rh4CG120000

Muniscin C-terminal mu homology domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0012011
Physical Location & Seq
Reverse (-)
23020988 .. 23023212
2225 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG120000.1

Sequence Viewer

Length: 1935 bp
ATGTCTTGCTTAGCCCTCTCTCTCCAACCCGCCAATGGATCCGACATCCTGCTCCAAACCCGAGAATGGTTCCCTCCGGCCCGAGCCCTCGTCGCCGTCTCCTCCTTCCGCGAAACCCGCCTCGCCTTCGCCGCCTCAAAGCAACAGCAACAGCAGCAGCTCCACAACCAGAGCAAAGACCACCCCAACAACTCCGACTCCTCCGCCGATTCCATCGCCTCCCTCGGCGACGACCCCCTCGCCGCCTCCAGCGGCCAGCTCATCGTCGGCGTCGAGAGCCGCTTCCGCGTCGTGTACCGCCTGGTGAACTCCATCTACGTCCTCGGGATCACCACCGCCGACCACGACAACTCCATCAACGTCTTCGAGTGCATCCACATCGTCAACCAGGCCGTCAGCGTCGTCGTCACCGCCTGCCGCGGCGTCGACGTCACGCCGGAGAAGCTCGCCCGCAAGTACGCCGAGATCTACATGGCGCTCGACATCGTCCTCCGTGGCGTCAGCAACATCCGCCTGGCGGCGATGCTGTCGTCGATGCACGGCGACGGCATTGCCAAGATGGTCCACTCGGCGCTGGACACCGAGAACAAGGTCCGAGGCGCCGAGAGCTGGAGAGGCATTGAGGTGCTTGCGGTGGAGCAGGAGGCCGGAATTATGGCGTTCAACAATACGACGTTCGAGTTGCCGCCGGAGACGATCGCCGCCGGGGACGAGGTGGCGGCGAGTCTGGCGCCGGTGGTACAGACCGAGGACAAGCAAGAGGAGGAGGAAGAGAGTGAAGCAGAGAAAGATCCGTTTGCAGCTAGTGAGAAGATTAATCAACCTGAAGAATTGGTGACTGGATTCAAGAAGAATAAGGATCCTTCGGCGACGGATTTAACACTGGCATTGTCTACTCTTGAGGTGACGACATTGCCCCCTGCAGAGGCCACACAGTCTACTCACATTGCGGTCGAAGGTTTTGAAGGGGAGTATGGTGGGATTGAGTTTGGGAATGAGCAGGCTTCTTTGAATGAGGCTTTTGAAGGGTTTTCGGATGCCTGGGGTGGTGGTTTGGATGCTTCTGAGTTTGTTGGCACAAAGAAGGTTGTGAAGTCGCAAGGGCTTGGTGGGCTTGAATTGTTGCAGACCGGACCGGATCCTCCTAAAGCTGCTGGTGCTGCTGCAGCAGGTACTCCTCTCGAGGAACTTGTAGGAAAAACTGAAATGAAGGGTCCTGAGATGAACATTGTGGAAGAGATCAATGTTGAGTTTAGGGAATCATTACTTGCTAGAGTAGCATTAAAGGGTGTTGTTTATTTGAAAACTTTGCCAACCAAAACTAGTGGTGATAAGGAAACTGAGTTTTCCTTCAGGGTTGAGGGAACCACTGCAGTTAAAAGGTTTGTTATGCAGAATTCTCGAATTAGTAGTCTAGGCAATGGGATGTTTCATGTGAGAACTGCGGCCTCTGATGAGCCTTTGCCCATTTTGAAGTATAGTTTGCAACCTAGGTTAACCCCATTGCCTTTGAGGGTTCGTCTTGTGCAGCGTCACACAGGAAGCTTGCTGTCAGTGATGATACAATATGTGTCGAACCCTGAGTTGCCGGCACCTTTGACTGATGTCACATTTATTGTGAAACTGCCCCTTGACCCTACATTGCTGAAGGTCTCACCGAAAGCTGTATTAAATCGGTCTGAGAAAGAACTGAAATGGCATGTCCCTGAGATTCCGTTGAATGGACCGCCTGGTCGGTTGAGGGTGAGGATGCCTGTAGATTCTAATGAAGAAGATGGTGGTGAGGAGATTGAGGTTGTTGCCTATGTGAAATTTTCTTGGCAAGGAAACAGATCATTGTCTGGAGTTTGTCTGCGCCCAGCTTCTGAGGGTAAGACAGACTTTTATGAGGTTAATCACAGGTATGAGAGTGGGGTATATATGTGCAACCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
muHD

Protein Analysis

644

Amino Acids

69.97

Weight (kDa)

5.0

Isoelectric Point (pI)

49.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
muHD PF10291 407 - 619 1.4e-13 Muniscin C-terminal mu homology domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G57460
fragaria_vesca FvH4_5g27790
malus_domestica MD13G1254300.v1.1 MD13G1254800.v1.1 MD16G1258100.v1.1
prunus_persica Prupe.2G007900_v2.0.a1
pyrus_communis pycom16g22240 pycom16g22250
rosa_chinensis RchiOBHm_Chr4g0402481
rosa_laevigata RLG00000009080
rosa_multiflora Rmu_co8490925.1_g000001 Rmu_ssc0000330.1_g000030
rosa_roxburghii Rroxscaffold_5G00347170
rosa_rugosa Rorug04G0035800
rosa_samantha Rh4AG113000 Rh4BG105600 Rh4CG120000 Rh4DG105000
rosa_wichuraiana Rw4G009070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1731
AatII GACGTC 1 cut(s) 432
Acc36I ACCTGC 1 cut(s) 1160
AccB1I GGYRCC 3 cut(s) 599, 730, 1591
AccI GTMKAC 3 cut(s) 426, 893, 938
AccII CGCG 3 cut(s) 111, 288, 420
AclWI GGATC 8 cut(s) 33, 46, 335, 785, 854, 867, 1133, 1146
AcoI YGGCCR 1 cut(s) 253
AcsI RAATTY 2 cut(s) 1396, 1811
AcuI CTGAAG 3 cut(s) 846, 1336, 1667
AcyI GRCGYC 6 cut(s) 270, 423, 429, 498, 600, 731
AfaI GTAC 4 cut(s) 296, 458, 741, 1174
AfiI CCNNNNNNNGG 6 cut(s) 35, 66, 517, 609, 925, 1721
AgsI TTSAA 9 cut(s) 664, 847, 965, 1012, 1025, 1118, 1303, 1474, 1720
AhlI ACTAGT 1 cut(s) 1322
AjnI CCWGG 5 cut(s) 300, 387, 513, 1040, 1729
AluBI AGCT 9 cut(s) 160, 259, 445, 609, 803, 1151, 1545, 1664, 1862
AluI AGCT 9 cut(s) 160, 259, 445, 609, 803, 1151, 1545, 1664, 1862
Alw26I GTCTC 3 cut(s) 103, 686, 1657
AlwI GGATC 8 cut(s) 33, 46, 335, 785, 854, 867, 1133, 1146
AlwNI CAGNNNCTG 1 cut(s) 1865
Ama87I CYCGRG 4 cut(s) 60, 81, 323, 1181
AoxI GGCC 6 cut(s) 78, 253, 390, 645, 927, 1446
ApeKI GCWGC 8 cut(s) 154, 157, 800, 1151, 1160, 1163, 1166, 1528
ApoI RAATTY 2 cut(s) 1396, 1811
ArsI GACNNNNNNTTYG 2 cut(s) 1396, 1428
AseI ATTAAT 1 cut(s) 816
AspA2I CCTAGG 1 cut(s) 1490
AspLEI GCGC 5 cut(s) 478, 574, 602, 733, 1857
AspS9I GGNCC 6 cut(s) 79, 562, 592, 1133, 1214, 1724
AsuC2I CCSGG 1 cut(s) 706
AsuHPI GGTGA 9 cut(s) 316, 322, 400, 847, 916, 1340, 1647, 1756, 1793
AvaI CYCGRG 4 cut(s) 60, 81, 323, 1181
AvaII GGWCC 5 cut(s) 562, 592, 1133, 1214, 1724
AvrII CCTAGG 1 cut(s) 1490
BamHI GGATCC 3 cut(s) 38, 859, 1138
BanI GGYRCC 3 cut(s) 599, 730, 1591
BanII GRGCYC 1 cut(s) 88
BbsI GAAGAC 1 cut(s) 355
BbvI GCAGC 8 cut(s) 166, 169, 812, 1138, 1147, 1150, 1178, 1540
BccI CCATC 5 cut(s) 221, 320, 362, 553, 1769
BceAI ACGGC 4 cut(s) 80, 377, 556, 562
BcgI CGANNNNNNTGC 6 cut(s) 361, 395, 533, 567, 1382, 1416
BciT130I CCWGG 5 cut(s) 302, 389, 515, 1042, 1731
BcnI CCSGG 1 cut(s) 706
BcoDI GTCTC 3 cut(s) 103, 686, 1657
BcuI ACTAGT 1 cut(s) 1322
BfaI CTAG 5 cut(s) 804, 1272, 1323, 1415, 1491
BfmI CTRYAG 4 cut(s) 921, 1164, 1371, 1755
BfoI RGCGCY 4 cut(s) 479, 575, 603, 734
BfuAI ACCTGC 1 cut(s) 1160
BglII AGATCT 1 cut(s) 465
BlnI CCTAGG 1 cut(s) 1490
BlpI GCTNAGC 1 cut(s) 10
Bme1390I CCNGG 6 cut(s) 302, 389, 515, 706, 1042, 1731
Bme18I GGWCC 5 cut(s) 562, 592, 1133, 1214, 1724
BmeT110I CYCGRG 4 cut(s) 60, 81, 323, 1181
BmgT120I GGNCC 6 cut(s) 79, 562, 592, 1133, 1214, 1724
BmiI GGNNCC 9 cut(s) 40, 71, 601, 732, 861, 1140, 1215, 1366, 1593
BmrFI CCNGG 6 cut(s) 302, 389, 515, 706, 1042, 1731
BmsI GCATC 6 cut(s) 381, 513, 525, 1027, 1048, 1740
BoxI GACNNNNGTC 1 cut(s) 1604
BpiI GAAGAC 1 cut(s) 355
BpmI CTGGAG 3 cut(s) 232, 631, 1863
Bpu1102I GCTNAGC 1 cut(s) 10
BpuEI CTTGAG 1 cut(s) 920
BpuMI CCSGG 1 cut(s) 706
BsaHI GRCGYC 6 cut(s) 270, 423, 429, 498, 600, 731
BsaI GGTCTC 1 cut(s) 1657
BsaJI CCNNGG 9 cut(s) 223, 322, 418, 493, 595, 705, 747, 1041, 1490
BsaWI WCCGGW 2 cut(s) 1130, 1135
BsaXI ACNNNNNCTCC 4 cut(s) 182, 212, 335, 365
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 66, 517, 609, 925, 1721
Bse118I RCCGGY 2 cut(s) 733, 1588
Bse1I ACTGG 2 cut(s) 844, 888
Bse3DI GCAATG 6 cut(s) 549, 911, 945, 1426, 1502, 1640
BseBI CCWGG 5 cut(s) 302, 389, 515, 1042, 1731
BseDI CCNNGG 9 cut(s) 223, 322, 418, 493, 595, 705, 747, 1041, 1490
BseGI GGATG 7 cut(s) 45, 372, 507, 1042, 1063, 1431, 1755
BseLI CCNNNNNNNGG 6 cut(s) 35, 66, 517, 609, 925, 1721
BseMI GCAATG 6 cut(s) 549, 911, 945, 1426, 1502, 1640
BseMII CTCAG 7 cut(s) 1056, 1209, 1332, 1572, 1671, 1698, 1857
BseNI ACTGG 2 cut(s) 844, 888
BseRI GAGGAG 6 cut(s) 91, 190, 776, 779, 1167, 1799
BseXI GCAGC 8 cut(s) 166, 169, 812, 1138, 1147, 1150, 1178, 1540
BseYI CCCAGC 1 cut(s) 1858
BsgI GTGCAG 1 cut(s) 1547
Bsh1236I CGCG 3 cut(s) 111, 288, 420
Bsh1285I CGRYCG 2 cut(s) 699, 954
BshFI GGCC 6 cut(s) 80, 255, 392, 647, 929, 1448
BshNI GGYRCC 3 cut(s) 599, 730, 1591
BsiEI CGRYCG 2 cut(s) 699, 954
BsiHKCI CYCGRG 4 cut(s) 60, 81, 323, 1181
BsiSI CCGG 9 cut(s) 77, 437, 648, 689, 705, 734, 1131, 1136, 1589
BslFI GGGAC 2 cut(s) 722, 1688
BslI CCNNNNNNNGG 6 cut(s) 35, 66, 517, 609, 925, 1721
BsmAI GTCTC 3 cut(s) 103, 686, 1657
BsmBI CGTCTC 2 cut(s) 103, 686
BsmFI GGGAC 2 cut(s) 722, 1688
BsnI GGCC 6 cut(s) 80, 255, 392, 647, 929, 1448
Bso31I GGTCTC 1 cut(s) 1657
BsoBI CYCGRG 4 cut(s) 60, 81, 323, 1181
Bsp1286I GDGCHC 1 cut(s) 88
Bsp143I GATC 9 cut(s) 38, 327, 465, 696, 790, 859, 1138, 1239, 1832
Bsp1720I GCTNAGC 1 cut(s) 10
BspANI GGCC 6 cut(s) 80, 255, 392, 647, 929, 1448
BspCNI CTCAG 7 cut(s) 1057, 1210, 1333, 1573, 1672, 1699, 1858
BspFNI CGCG 3 cut(s) 111, 288, 420
BspLI GGNNCC 9 cut(s) 40, 71, 601, 732, 861, 1140, 1215, 1366, 1593
BspMAI CTGCAG 3 cut(s) 925, 1168, 1375
BspMI ACCTGC 1 cut(s) 1160
BspPI GGATC 8 cut(s) 33, 46, 335, 785, 854, 867, 1133, 1146
BspT107I GGYRCC 3 cut(s) 599, 730, 1591
BspTNI GGTCTC 1 cut(s) 1657
BsrDI GCAATG 6 cut(s) 549, 911, 945, 1426, 1502, 1640
BsrFI RCCGGY 2 cut(s) 733, 1588
BsrI ACTGG 2 cut(s) 844, 888
BssAI RCCGGY 2 cut(s) 733, 1588
BssECI CCNNGG 9 cut(s) 223, 322, 418, 493, 595, 705, 747, 1041, 1490
BssMI GATC 9 cut(s) 38, 327, 465, 696, 790, 859, 1138, 1239, 1832
BssNI GRCGYC 6 cut(s) 270, 423, 429, 498, 600, 731
BssT1I CCWWGG 1 cut(s) 1490
Bst2UI CCWGG 5 cut(s) 302, 389, 515, 1042, 1731
Bst4CI ACNGT 1 cut(s) 936
Bst6I CTCTTC 2 cut(s) 765, 1230
BstACI GRCGYC 6 cut(s) 270, 423, 429, 498, 600, 731
BstC8I GCNNGC 8 cut(s) 257, 415, 447, 451, 630, 1002, 1547, 1590
BstDEI CTNAG 8 cut(s) 10, 1065, 1218, 1341, 1581, 1680, 1707, 1866
BstDSI CCRYGG 2 cut(s) 418, 493
BstF5I GGATG 7 cut(s) 45, 372, 507, 1042, 1063, 1431, 1755
BstFNI CGCG 3 cut(s) 111, 288, 420
BstH2I RGCGCY 4 cut(s) 479, 575, 603, 734
BstHHI GCGC 5 cut(s) 478, 574, 602, 733, 1857
BstKTI GATC 9 cut(s) 41, 330, 468, 699, 793, 862, 1141, 1242, 1835
BstMAI GTCTC 3 cut(s) 103, 686, 1657
BstMBI GATC 9 cut(s) 38, 327, 465, 696, 790, 859, 1138, 1239, 1832
BstMCI CGRYCG 2 cut(s) 699, 954
BstNI CCWGG 5 cut(s) 302, 389, 515, 1042, 1731
BstNSI RCATGY 1 cut(s) 1703
BstPAI GACNNNNGTC 1 cut(s) 1604
BstSCI CCNGG 6 cut(s) 300, 387, 513, 704, 1040, 1729
BstSFI CTRYAG 4 cut(s) 921, 1164, 1371, 1755
BstUI CGCG 3 cut(s) 111, 288, 420
BstV1I GCAGC 8 cut(s) 166, 169, 812, 1138, 1147, 1150, 1178, 1540
BstV2I GAAGAC 1 cut(s) 355
BstX2I RGATCY 5 cut(s) 38, 465, 790, 859, 1138
BstYI RGATCY 5 cut(s) 38, 465, 790, 859, 1138
BsuRI GGCC 6 cut(s) 80, 255, 392, 647, 929, 1448
BtgI CCRYGG 2 cut(s) 418, 493
BtgZI GCGATG 2 cut(s) 199, 536
BtsCI GGATG 7 cut(s) 45, 372, 507, 1042, 1063, 1431, 1755
BtsI GCAGTG 1 cut(s) 1368
BtsIMutI CAGTG 3 cut(s) 881, 1368, 1560
BveI ACCTGC 1 cut(s) 1160
Cac8I GCNNGC 8 cut(s) 257, 415, 447, 451, 630, 1002, 1547, 1590
CaiI CAGNNNCTG 1 cut(s) 1865
CfoI GCGC 5 cut(s) 478, 574, 602, 733, 1857
Cfr10I RCCGGY 2 cut(s) 733, 1588
Cfr13I GGNCC 6 cut(s) 79, 562, 592, 1133, 1214, 1724
Cfr42I CCGCGG 1 cut(s) 421
CpoI CGGWCCG 1 cut(s) 1133
CseI GACGC 6 cut(s) 259, 277, 388, 412, 487, 1520
Csp6I GTAC 4 cut(s) 295, 457, 740, 1173
CspCI CAANNNNNGTGG 2 cut(s) 1306, 1341
CspI CGGWCCG 1 cut(s) 1133
CviAII CATG 4 cut(s) 472, 1433, 1700, 1932
CviQI GTAC 4 cut(s) 295, 457, 740, 1173
DdeI CTNAG 8 cut(s) 10, 1065, 1218, 1341, 1581, 1680, 1707, 1866
DinI GGCGCC 2 cut(s) 601, 732
DpnI GATC 9 cut(s) 40, 329, 467, 698, 792, 861, 1140, 1241, 1834
DpnII GATC 9 cut(s) 38, 327, 465, 696, 790, 859, 1138, 1239, 1832
DrdI GACNNNNNNGTC 1 cut(s) 1731
DseDI GACNNNNNNGTC 1 cut(s) 1731
EaeI YGGCCR 1 cut(s) 253
Eam1104I CTCTTC 2 cut(s) 765, 1230
EarI CTCTTC 2 cut(s) 765, 1230
EciI GGCGGA 2 cut(s) 193, 500
Eco130I CCWWGG 1 cut(s) 1490
Eco24I GRGCYC 1 cut(s) 88
Eco31I GGTCTC 1 cut(s) 1657
Eco47I GGWCC 5 cut(s) 562, 592, 1133, 1214, 1724
Eco57I CTGAAG 3 cut(s) 846, 1336, 1667
Eco88I CYCGRG 4 cut(s) 60, 81, 323, 1181
EcoO109I RGGNCCY 1 cut(s) 1214
EcoRI GAATTC 1 cut(s) 1396
EcoRII CCWGG 5 cut(s) 300, 387, 513, 1040, 1729
EcoT14I CCWWGG 1 cut(s) 1490
EcoT38I GRGCYC 1 cut(s) 88
EgeI GGCGCC 2 cut(s) 601, 732
EheI GGCGCC 2 cut(s) 601, 732
ErhI CCWWGG 1 cut(s) 1490
Esp3I CGTCTC 2 cut(s) 103, 686
FaeI CATG 4 cut(s) 475, 1436, 1703, 1935
FalI AAGNNNNNCTT 2 cut(s) 1865, 1897
FaqI GGGAC 2 cut(s) 722, 1688
FatI CATG 4 cut(s) 471, 1432, 1699, 1931
FauI CCCGC 3 cut(s) 37, 125, 458
FblI GTMKAC 3 cut(s) 426, 893, 938
FokI GGATG 7 cut(s) 32, 359, 494, 1049, 1070, 1438, 1762
FriOI GRGCYC 1 cut(s) 88
FspBI CTAG 5 cut(s) 804, 1272, 1323, 1415, 1491
GlaI GCGC 5 cut(s) 477, 573, 601, 732, 1856
GsaI CCCAGC 1 cut(s) 1862
GsuI CTGGAG 3 cut(s) 232, 631, 1863
HaeII RGCGCY 4 cut(s) 479, 575, 603, 734
HaeIII GGCC 6 cut(s) 80, 255, 392, 647, 929, 1448
HapII CCGG 9 cut(s) 77, 437, 648, 689, 705, 734, 1131, 1136, 1589
HgaI GACGC 6 cut(s) 259, 277, 388, 412, 487, 1520
HhaI GCGC 5 cut(s) 478, 574, 602, 733, 1857
Hin1I GRCGYC 6 cut(s) 270, 423, 429, 498, 600, 731
Hin1II CATG 4 cut(s) 475, 1436, 1703, 1935
Hin6I GCGC 5 cut(s) 476, 572, 600, 731, 1855
HinP1I GCGC 5 cut(s) 476, 572, 600, 731, 1855
HincII GTYRAC 3 cut(s) 385, 427, 1497
HindII GTYRAC 3 cut(s) 385, 427, 1497
HindIII AAGCTT 1 cut(s) 1543
HinfI GANTC 7 cut(s) 197, 209, 724, 843, 1259, 1711, 1760
HpaI GTTAAC 1 cut(s) 1497
HpaII CCGG 9 cut(s) 77, 437, 648, 689, 705, 734, 1131, 1136, 1589
HphI GGTGA 9 cut(s) 316, 322, 400, 847, 916, 1340, 1647, 1756, 1793
Hpy166II GTNNAC 8 cut(s) 295, 307, 385, 427, 565, 894, 939, 1497
Hpy188I TCNGA 8 cut(s) 43, 196, 596, 1036, 1066, 1453, 1681, 1867
Hpy188III TCNNGA 8 cut(s) 274, 325, 847, 899, 1181, 1217, 1401, 1842
Hpy8I GTNNAC 8 cut(s) 295, 307, 385, 427, 565, 894, 939, 1497
HpyCH4III ACNGT 1 cut(s) 936
HpyCH4IV ACGT 4 cut(s) 318, 360, 429, 674
HpyF3I CTNAG 8 cut(s) 10, 1065, 1218, 1341, 1581, 1680, 1707, 1866
HpySE526I ACGT 4 cut(s) 318, 360, 429, 674
Hsp92I GRCGYC 6 cut(s) 270, 423, 429, 498, 600, 731
Hsp92II CATG 4 cut(s) 475, 1436, 1703, 1935
HspAI GCGC 5 cut(s) 476, 572, 600, 731, 1855
KasI GGCGCC 2 cut(s) 599, 730
KroI GCCGGC 1 cut(s) 1588
KroNI GCCGGC 1 cut(s) 1590
KspAI GTTAAC 1 cut(s) 1497
KspI CCGCGG 1 cut(s) 421
Kzo9I GATC 9 cut(s) 38, 327, 465, 696, 790, 859, 1138, 1239, 1832
LmnI GCTCC 3 cut(s) 57, 165, 637
Lsp1109I GCAGC 8 cut(s) 166, 169, 812, 1138, 1147, 1150, 1178, 1540
LweI GCATC 6 cut(s) 381, 513, 525, 1027, 1048, 1740
MaeI CTAG 5 cut(s) 804, 1272, 1323, 1415, 1491
MaeII ACGT 4 cut(s) 318, 360, 429, 674
MaeIII GTNAC 6 cut(s) 406, 430, 835, 904, 1532, 1606
MalI GATC 9 cut(s) 40, 329, 467, 698, 792, 861, 1140, 1241, 1834
MboI GATC 9 cut(s) 38, 327, 465, 696, 790, 859, 1138, 1239, 1832
MboII GAAGA 8 cut(s) 355, 782, 823, 839, 862, 1247, 1781, 1784
MflI RGATCY 5 cut(s) 38, 465, 790, 859, 1138
MhlI GDGCHC 1 cut(s) 88
MluCI AATT 6 cut(s) 651, 830, 1118, 1396, 1404, 1811
Mly113I GGCGCC 2 cut(s) 600, 731
MlyI GAGTC 2 cut(s) 191, 733
MmeI TCCRAC 3 cut(s) 49, 66, 219
MroNI GCCGGC 1 cut(s) 1588
MseI TTAA 7 cut(s) 816, 878, 1283, 1377, 1496, 1670, 1893
MslI CAYNNNNRTG 2 cut(s) 623, 1902
MspA1I CMGCKG 2 cut(s) 252, 420
MspI CCGG 9 cut(s) 77, 437, 648, 689, 705, 734, 1131, 1136, 1589
MspR9I CCNGG 6 cut(s) 302, 389, 515, 706, 1042, 1731
MvaI CCWGG 5 cut(s) 302, 389, 515, 1042, 1731
MvnI CGCG 3 cut(s) 111, 288, 420
NaeI GCCGGC 1 cut(s) 1590
NarI GGCGCC 2 cut(s) 600, 731
NciI CCSGG 1 cut(s) 706
NdeII GATC 9 cut(s) 38, 327, 465, 696, 790, 859, 1138, 1239, 1832
NgoMIV GCCGGC 1 cut(s) 1588
NlaIII CATG 4 cut(s) 475, 1436, 1703, 1935
NlaIV GGNNCC 9 cut(s) 40, 71, 601, 732, 861, 1140, 1215, 1366, 1593
NmeAIII GCCGAG 4 cut(s) 204, 487, 548, 628
NmuCI GTSAC 6 cut(s) 406, 430, 835, 904, 1532, 1606
NspI RCATGY 1 cut(s) 1703
PaeR7I CTCGAG 1 cut(s) 1181
PcsI WCGNNNNNNNCGW 1 cut(s) 270
PdiI GCCGGC 1 cut(s) 1590
PfeI GAWTC 5 cut(s) 209, 843, 1259, 1711, 1760
PflFI GACNNNGTC 1 cut(s) 485
Ple19I CGATCG 1 cut(s) 699
PleI GAGTC 2 cut(s) 191, 732
PluTI GGCGCC 2 cut(s) 603, 734
PpsI GAGTC 2 cut(s) 191, 732
PpuMI RGGWCCY 1 cut(s) 1214
PshAI GACNNNNGTC 1 cut(s) 1604
PshBI ATTAAT 1 cut(s) 816
Psp5II RGGWCCY 1 cut(s) 1214
Psp6I CCWGG 5 cut(s) 300, 387, 513, 1040, 1729
PspFI CCCAGC 1 cut(s) 1858
PspGI CCWGG 5 cut(s) 300, 387, 513, 1040, 1729
PspN4I GGNNCC 9 cut(s) 40, 71, 601, 732, 861, 1140, 1215, 1366, 1593
PspPI GGNCC 6 cut(s) 79, 562, 592, 1133, 1214, 1724
PspPPI RGGWCCY 1 cut(s) 1214
PsrI GAACNNNNNNTAC 2 cut(s) 299, 331
PstI CTGCAG 3 cut(s) 925, 1168, 1375
PstNI CAGNNNCTG 1 cut(s) 1865
PsuI RGATCY 5 cut(s) 38, 465, 790, 859, 1138
PsyI GACNNNGTC 1 cut(s) 485
PvuI CGATCG 1 cut(s) 699
RsaI GTAC 4 cut(s) 296, 458, 741, 1174
RsaNI GTAC 4 cut(s) 295, 457, 740, 1173
RseI CAYNNNNRTG 2 cut(s) 623, 1902
Rsr2I CGGWCCG 1 cut(s) 1133
RsrII CGGWCCG 1 cut(s) 1133
SacII CCGCGG 1 cut(s) 421
SalI GTCGAC 1 cut(s) 425
SaqAI TTAA 7 cut(s) 816, 878, 1283, 1377, 1496, 1670, 1893
Sau3AI GATC 9 cut(s) 38, 327, 465, 696, 790, 859, 1138, 1239, 1832
Sau96I GGNCC 6 cut(s) 79, 562, 592, 1133, 1214, 1724
SchI GAGTC 2 cut(s) 191, 733
ScrFI CCNGG 6 cut(s) 302, 389, 515, 706, 1042, 1731
SduI GDGCHC 1 cut(s) 88
SfaNI GCATC 6 cut(s) 381, 513, 525, 1027, 1048, 1740
SfcI CTRYAG 4 cut(s) 921, 1164, 1371, 1755
SfoI GGCGCC 2 cut(s) 601, 732
Sfr274I CTCGAG 1 cut(s) 1181
Sfr303I CCGCGG 1 cut(s) 421
SgrAI CRCCGGYG 1 cut(s) 733
SgrBI CCGCGG 1 cut(s) 421
SgrDI CGTCGACG 1 cut(s) 425
SinI GGWCC 5 cut(s) 562, 592, 1133, 1214, 1724
SlaI CTCGAG 1 cut(s) 1181
SmiMI CAYNNNNRTG 2 cut(s) 623, 1902
SmlI CTYRAG 2 cut(s) 899, 1181
SmoI CTYRAG 2 cut(s) 899, 1181
SpeI ACTAGT 1 cut(s) 1322
Sse9I AATT 6 cut(s) 651, 830, 1118, 1396, 1404, 1811
SspDI GGCGCC 2 cut(s) 599, 730
SspMI CTAG 5 cut(s) 804, 1272, 1323, 1415, 1491
StyD4I CCNGG 6 cut(s) 300, 387, 513, 704, 1040, 1729
StyI CCWWGG 1 cut(s) 1490
TaaI ACNGT 1 cut(s) 936
TaiI ACGT 4 cut(s) 321, 363, 432, 677
TaqII GACCGA 2 cut(s) 761, 1665
TasI AATT 6 cut(s) 651, 830, 1118, 1396, 1404, 1811
TfiI GAWTC 5 cut(s) 209, 843, 1259, 1711, 1760
Tru1I TTAA 7 cut(s) 816, 878, 1283, 1377, 1496, 1670, 1893
Tru9I TTAA 7 cut(s) 816, 878, 1283, 1377, 1496, 1670, 1893
TscAI CASTG 3 cut(s) 888, 1375, 1560
TseFI GTSAC 6 cut(s) 406, 430, 835, 904, 1532, 1606
TseI GCWGC 8 cut(s) 154, 157, 800, 1151, 1160, 1163, 1166, 1528
Tsp45I GTSAC 6 cut(s) 406, 430, 835, 904, 1532, 1606
TspDTI ATGAA 4 cut(s) 1223, 1238, 1421, 1782
TspGWI ACGGA 4 cut(s) 482, 783, 887, 1704
TspRI CASTG 3 cut(s) 888, 1375, 1560
Tth111I GACNNNGTC 1 cut(s) 485
VpaK11BI GGWCC 5 cut(s) 562, 592, 1133, 1214, 1724
VspI ATTAAT 1 cut(s) 816
XapI RAATTY 2 cut(s) 1396, 1811
XceI RCATGY 1 cut(s) 1703
XcmI CCANNNNNNNNNTGG 1 cut(s) 32
XhoI CTCGAG 1 cut(s) 1181
XmaJI CCTAGG 1 cut(s) 1490
XmiI GTMKAC 3 cut(s) 426, 893, 938
XspI CTAG 5 cut(s) 804, 1272, 1323, 1415, 1491
ZraI GACGTC 1 cut(s) 430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.