Rroxscaffold_5G00347170

Muniscin C-terminal mu homology domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0012011
Physical Location & Seq
Reverse (-)
18366205 .. 18368339
2135 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00347170.1

Sequence Viewer

Length: 1932 bp
ATGTCTTGCTTAGCCCTCTCTCTCCAACCCGCCAATGGATCCGACATCCTGCTCCAAACCCGAGAATGGTTCCCTCCGGCCCGAGCCCTCGTCGCCGTCTCCTCCTTCCGCGAAACCCGCCTCGCCTTCGCCGCCTCAAAGCAACAGCAGCAGCAGCCCCACAACCAGAGCAAAGACCAACCCAACAGCTCCGACTCCTCCGCCGACTCCATCGCCTCACTCGGCGACGACCCCCTCGCCGCCTCCAGCGGCCAGCTCATCGTCGGCGTCGAGAGCCGCTACCGCGTCGTGTACCGCCTGGTGAACTCCATCTACGTCCTCGGGATCACCACCGCCGACCACGACAACTCCATCAACGTCTTCGAGTGCATCCACATCGTCAACCAGGCCGTCAGCGTCGTCGTCACCGCCTGCCGCGGCGTCGACGTCACGCCGGAGAAGCTCGCCCGCAAGTACGCCGAGATCTACATGGCGCTCGACATCGTCCTCCGTGGCGTCAGCAACATCCGCCTGGCGGCGATGCTGTCGTCGATGCACGGCGACGGCATTGCCAAGATGGTCCATTCGGCGCTGGACACCGAGAACAAGATCCGAGGCGCCGAGAGCTGGAGAGGCCTTGAGGTGCTTGCGGTGGAGCACGAGGCCGGAATTATGGCGTTCAACAATACGACATTCGAGTTGCCGCCAGAGACGATCGCCGCCGGGGACGAGGTGGCGGCGAGTTTGGCGCCGGTGGTACAGACTGAGGAGAAGCAAGAGGAGGAGGAAGAGAGTGAAGCAGAGAAAGATCCGTTTGCAGCTAGTGAGAAGATTAATCAACCTGAAGAGTTGGTGACTGGATTCAAGAAGAATAAGGATCCTTCGGCGACGGATTTAACACTGGCGTTGTCTACTCTTGAGGTGACGACATTGCCCCCTGCAGAGGCCACACAGTCTACTCACATTGCGGTCGAAGGGTTTGAAGGGGAGTATGGTGGGATTGAGTTTGGGAATGAGCAGGCTTCTTTGAATGAGGCTTTTGAAGGGTTTTCGGATGCTTGGGGTGGTGGTTTGGATGCTTCTGAGTTTGTTGGCACAAAGAAGGTTGTGAAGTCGCAAGGGCTTGGTGGGCTTGAATTGTTGCAGACTGGACCGGATCCTCCTAAAGCTACTGGTGCTGCTGCAGCAGGTACTCCTCTTGAGGAACTTGTAGGAAAAACTGAAATGAAGGGTCCTGAGATGAACATTGTGGAAGAGATCAATGTTGAGTTTAGGGAATCATTACTTGCTAGAGTAGCATTAAAGGGTGTTGTTTATTTGAAAACTTTGCCAACCAAAACTAGTGGTGATAAAGAAACCGAGTTTTCCTTCAGGGTTGAGGGAACCAGTGCAGTTAAAAGGTTTGTTATGCAGAATTCTCGAATTAGTAGTCTAGGCAATGGGATGTTTCATGTGAGAACTGCGGCCTCTGATGAGCCTTTACCCATTTTGAAGTATAGTTTGCAACCTAGGTTAACCCCGTTGCCTTTGAGGGTTCGTCTTGTGCAACGTCACACAGGAAGCTTGCTGTCAGTGATGATACAATATGTGTCGAACCCTGAGTTGCCGGCACCTTTGACTGATGTCACATTTATTGTGAAACTGCCCCTTGACCCTACATTGCTGAAGGTCTCACCAAAAGCTGTATTAAATCGGTCTGAGAAAGAACTGAAATGGCATGTCTCTGAGATTCCGTTGAATGGACCTCCTGGTCGGTTGAGAGTAAGGATGCCCGTAGATTCTAATGAAGAAGATGGTGGTGAGGAGATTGAGGTTGTTGCCTATGTGAAATTTTCTTGGCAAGGAAACAGATCATTGTCTGGAGTTTGTCTGCGGCCAGCTTCTGAGGGTAAGACAGACTTTTATGAGGTTAATCACAGGTATGAGAGTGGAGTATATATGTGCAACCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
muHD

Protein Analysis

643

Amino Acids

69.85

Weight (kDa)

5.0

Isoelectric Point (pI)

48.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
muHD PF10291 406 - 618 1.1e-13 Muniscin C-terminal mu homology domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012011)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G57460
fragaria_vesca FvH4_5g27790
malus_domestica MD13G1254300.v1.1 MD13G1254800.v1.1 MD16G1258100.v1.1
prunus_persica Prupe.2G007900_v2.0.a1
pyrus_communis pycom16g22240 pycom16g22250
rosa_chinensis RchiOBHm_Chr4g0402481
rosa_laevigata RLG00000009080
rosa_multiflora Rmu_co8490925.1_g000001 Rmu_ssc0000330.1_g000030
rosa_roxburghii Rroxscaffold_5G00347170
rosa_rugosa Rorug04G0035800
rosa_samantha Rh4AG113000 Rh4BG105600 Rh4CG120000 Rh4DG105000
rosa_wichuraiana Rw4G009070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1728
AatII GACGTC 1 cut(s) 429
Acc36I ACCTGC 1 cut(s) 1157
AccB1I GGYRCC 3 cut(s) 596, 727, 1588
AccI GTMKAC 3 cut(s) 423, 890, 935
AccII CGCG 3 cut(s) 111, 285, 417
AclWI GGATC 9 cut(s) 33, 46, 332, 583, 782, 851, 864, 1130, 1143
AcoI YGGCCR 2 cut(s) 250, 1853
AcsI RAATTY 2 cut(s) 1393, 1808
AcuI CTGAAG 3 cut(s) 843, 1333, 1664
AcyI GRCGYC 6 cut(s) 267, 420, 426, 495, 597, 728
AfaI GTAC 4 cut(s) 293, 455, 738, 1171
AfiI CCNNNNNNNGG 6 cut(s) 35, 66, 514, 606, 922, 1718
AgsI TTSAA 9 cut(s) 661, 844, 962, 1009, 1022, 1115, 1300, 1471, 1717
AhlI ACTAGT 1 cut(s) 1319
AjnI CCWGG 4 cut(s) 297, 384, 510, 1726
AluBI AGCT 9 cut(s) 189, 256, 442, 606, 800, 1148, 1542, 1661, 1859
AluI AGCT 9 cut(s) 189, 256, 442, 606, 800, 1148, 1542, 1661, 1859
Alw21I GWGCWC 1 cut(s) 639
Alw26I GTCTC 4 cut(s) 103, 683, 1654, 1705
AlwI GGATC 9 cut(s) 33, 46, 332, 583, 782, 851, 864, 1130, 1143
AlwNI CAGNNNCTG 1 cut(s) 1862
Ama87I CYCGRG 3 cut(s) 60, 81, 320
AoxI GGCC 8 cut(s) 78, 250, 387, 613, 642, 924, 1443, 1853
ApeKI GCWGC 7 cut(s) 148, 151, 154, 797, 1157, 1160, 1163
ApoI RAATTY 2 cut(s) 1393, 1808
ArsI GACNNNNNNTTYG 2 cut(s) 1393, 1425
AseI ATTAAT 1 cut(s) 813
AspA2I CCTAGG 1 cut(s) 1487
AspLEI GCGC 4 cut(s) 475, 571, 599, 730
AspS9I GGNCC 5 cut(s) 79, 559, 1130, 1211, 1721
AsuC2I CCSGG 1 cut(s) 703
AsuHPI GGTGA 8 cut(s) 313, 319, 397, 844, 913, 1337, 1644, 1790
AvaI CYCGRG 3 cut(s) 60, 81, 320
AvaII GGWCC 4 cut(s) 559, 1130, 1211, 1721
AvrII CCTAGG 1 cut(s) 1487
BamHI GGATCC 3 cut(s) 38, 856, 1135
BanI GGYRCC 3 cut(s) 596, 727, 1588
BanII GRGCYC 1 cut(s) 88
BauI CACGAG 1 cut(s) 638
BbsI GAAGAC 1 cut(s) 352
Bbv12I GWGCWC 1 cut(s) 639
BbvI GCAGC 7 cut(s) 160, 163, 166, 809, 1144, 1147, 1175
BccI CCATC 5 cut(s) 218, 317, 359, 550, 1766
BceAI ACGGC 4 cut(s) 80, 374, 553, 559
BcgI CGANNNNNNTGC 6 cut(s) 358, 392, 530, 564, 1379, 1413
BciT130I CCWGG 4 cut(s) 299, 386, 512, 1728
BcnI CCSGG 1 cut(s) 703
BcoDI GTCTC 4 cut(s) 103, 683, 1654, 1705
BcuI ACTAGT 1 cut(s) 1319
BfaI CTAG 5 cut(s) 801, 1269, 1320, 1412, 1488
BfmI CTRYAG 2 cut(s) 918, 1161
BfoI RGCGCY 4 cut(s) 476, 572, 600, 731
BfuAI ACCTGC 1 cut(s) 1157
BglII AGATCT 1 cut(s) 462
BlnI CCTAGG 1 cut(s) 1487
BlpI GCTNAGC 1 cut(s) 10
Bme1390I CCNGG 5 cut(s) 299, 386, 512, 703, 1728
Bme18I GGWCC 4 cut(s) 559, 1130, 1211, 1721
BmeT110I CYCGRG 3 cut(s) 60, 81, 320
BmgT120I GGNCC 5 cut(s) 79, 559, 1130, 1211, 1721
BmiI GGNNCC 9 cut(s) 40, 71, 598, 729, 858, 1137, 1212, 1363, 1590
BmrFI CCNGG 5 cut(s) 299, 386, 512, 703, 1728
BmsI GCATC 6 cut(s) 378, 510, 522, 1024, 1045, 1737
BoxI GACNNNNGTC 1 cut(s) 1601
BpiI GAAGAC 1 cut(s) 352
BpmI CTGGAG 3 cut(s) 229, 628, 1860
Bpu1102I GCTNAGC 1 cut(s) 10
BpuEI CTTGAG 3 cut(s) 638, 917, 1199
BpuMI CCSGG 1 cut(s) 703
BsaHI GRCGYC 6 cut(s) 267, 420, 426, 495, 597, 728
BsaI GGTCTC 1 cut(s) 1654
BsaJI CCNNGG 6 cut(s) 319, 415, 490, 592, 702, 1487
BsaWI WCCGGW 1 cut(s) 1132
BsaXI ACNNNNNCTCC 2 cut(s) 332, 362
Bsc4I CCNNNNNNNGG 6 cut(s) 35, 66, 514, 606, 922, 1718
Bse118I RCCGGY 2 cut(s) 730, 1585
Bse1I ACTGG 5 cut(s) 841, 885, 1132, 1156, 1365
Bse3DI GCAATG 5 cut(s) 546, 908, 942, 1423, 1637
BseBI CCWGG 4 cut(s) 299, 386, 512, 1728
BseDI CCNNGG 6 cut(s) 319, 415, 490, 592, 702, 1487
BseGI GGATG 7 cut(s) 45, 369, 504, 1039, 1060, 1428, 1752
BseLI CCNNNNNNNGG 6 cut(s) 35, 66, 514, 606, 922, 1718
BseMI GCAATG 5 cut(s) 546, 908, 942, 1423, 1637
BseMII CTCAG 7 cut(s) 735, 1053, 1206, 1569, 1668, 1695, 1854
BseNI ACTGG 5 cut(s) 841, 885, 1132, 1156, 1365
BseRI GAGGAG 7 cut(s) 91, 187, 761, 773, 776, 1164, 1796
BseXI GCAGC 7 cut(s) 160, 163, 166, 809, 1144, 1147, 1175
BsgI GTGCAG 1 cut(s) 1389
Bsh1236I CGCG 3 cut(s) 111, 285, 417
Bsh1285I CGRYCG 2 cut(s) 696, 951
BshFI GGCC 8 cut(s) 80, 252, 389, 615, 644, 926, 1445, 1855
BshNI GGYRCC 3 cut(s) 596, 727, 1588
BsiEI CGRYCG 2 cut(s) 696, 951
BsiHKAI GWGCWC 1 cut(s) 639
BsiHKCI CYCGRG 3 cut(s) 60, 81, 320
BsiSI CCGG 7 cut(s) 77, 434, 645, 702, 731, 1133, 1586
BslFI GGGAC 1 cut(s) 719
BslI CCNNNNNNNGG 6 cut(s) 35, 66, 514, 606, 922, 1718
BsmAI GTCTC 4 cut(s) 103, 683, 1654, 1705
BsmBI CGTCTC 2 cut(s) 103, 683
BsmFI GGGAC 1 cut(s) 719
BsnI GGCC 8 cut(s) 80, 252, 389, 615, 644, 926, 1445, 1855
Bso31I GGTCTC 1 cut(s) 1654
BsoBI CYCGRG 3 cut(s) 60, 81, 320
Bsp1286I GDGCHC 2 cut(s) 88, 639
Bsp1720I GCTNAGC 1 cut(s) 10
BspANI GGCC 8 cut(s) 80, 252, 389, 615, 644, 926, 1445, 1855
BspCNI CTCAG 7 cut(s) 736, 1054, 1207, 1570, 1669, 1696, 1855
BspFNI CGCG 3 cut(s) 111, 285, 417
BspLI GGNNCC 9 cut(s) 40, 71, 598, 729, 858, 1137, 1212, 1363, 1590
BspMAI CTGCAG 2 cut(s) 922, 1165
BspMI ACCTGC 1 cut(s) 1157
BspPI GGATC 9 cut(s) 33, 46, 332, 583, 782, 851, 864, 1130, 1143
BspT107I GGYRCC 3 cut(s) 596, 727, 1588
BspTNI GGTCTC 1 cut(s) 1654
BsrDI GCAATG 5 cut(s) 546, 908, 942, 1423, 1637
BsrFI RCCGGY 2 cut(s) 730, 1585
BsrI ACTGG 5 cut(s) 841, 885, 1132, 1156, 1365
BssAI RCCGGY 2 cut(s) 730, 1585
BssECI CCNNGG 6 cut(s) 319, 415, 490, 592, 702, 1487
BssNI GRCGYC 6 cut(s) 267, 420, 426, 495, 597, 728
BssSI CACGAG 1 cut(s) 638
BssT1I CCWWGG 1 cut(s) 1487
Bst2BI CACGAG 1 cut(s) 638
Bst2UI CCWGG 4 cut(s) 299, 386, 512, 1728
Bst4CI ACNGT 1 cut(s) 933
Bst6I CTCTTC 3 cut(s) 762, 819, 1227
BstACI GRCGYC 6 cut(s) 267, 420, 426, 495, 597, 728
BstC8I GCNNGC 9 cut(s) 254, 412, 444, 448, 627, 999, 1544, 1587, 1857
BstDEI CTNAG 8 cut(s) 10, 744, 1062, 1215, 1578, 1677, 1704, 1863
BstDSI CCRYGG 2 cut(s) 415, 490
BstF5I GGATG 7 cut(s) 45, 369, 504, 1039, 1060, 1428, 1752
BstFNI CGCG 3 cut(s) 111, 285, 417
BstH2I RGCGCY 4 cut(s) 476, 572, 600, 731
BstHHI GCGC 4 cut(s) 475, 571, 599, 730
BstMAI GTCTC 4 cut(s) 103, 683, 1654, 1705
BstMCI CGRYCG 2 cut(s) 696, 951
BstNI CCWGG 4 cut(s) 299, 386, 512, 1728
BstNSI RCATGY 1 cut(s) 1700
BstPAI GACNNNNGTC 1 cut(s) 1601
BstSCI CCNGG 5 cut(s) 297, 384, 510, 701, 1726
BstSFI CTRYAG 2 cut(s) 918, 1161
BstUI CGCG 3 cut(s) 111, 285, 417
BstV1I GCAGC 7 cut(s) 160, 163, 166, 809, 1144, 1147, 1175
BstV2I GAAGAC 1 cut(s) 352
BstX2I RGATCY 6 cut(s) 38, 462, 588, 787, 856, 1135
BstYI RGATCY 6 cut(s) 38, 462, 588, 787, 856, 1135
BsuRI GGCC 8 cut(s) 80, 252, 389, 615, 644, 926, 1445, 1855
BtgI CCRYGG 2 cut(s) 415, 490
BtgZI GCGATG 2 cut(s) 196, 533
BtsCI GGATG 7 cut(s) 45, 369, 504, 1039, 1060, 1428, 1752
BtsIMutI CAGTG 3 cut(s) 878, 1372, 1557
BveI ACCTGC 1 cut(s) 1157
Cac8I GCNNGC 9 cut(s) 254, 412, 444, 448, 627, 999, 1544, 1587, 1857
CaiI CAGNNNCTG 1 cut(s) 1862
CfoI GCGC 4 cut(s) 475, 571, 599, 730
Cfr10I RCCGGY 2 cut(s) 730, 1585
Cfr13I GGNCC 5 cut(s) 79, 559, 1130, 1211, 1721
Cfr42I CCGCGG 1 cut(s) 418
CseI GACGC 5 cut(s) 256, 274, 385, 409, 484
Csp6I GTAC 4 cut(s) 292, 454, 737, 1170
CspCI CAANNNNNGTGG 2 cut(s) 1303, 1338
CviAII CATG 4 cut(s) 469, 1430, 1697, 1929
CviQI GTAC 4 cut(s) 292, 454, 737, 1170
DdeI CTNAG 8 cut(s) 10, 744, 1062, 1215, 1578, 1677, 1704, 1863
DinI GGCGCC 2 cut(s) 598, 729
DrdI GACNNNNNNGTC 1 cut(s) 1728
DseDI GACNNNNNNGTC 1 cut(s) 1728
EaeI YGGCCR 2 cut(s) 250, 1853
Eam1104I CTCTTC 3 cut(s) 762, 819, 1227
EarI CTCTTC 3 cut(s) 762, 819, 1227
EciI GGCGGA 2 cut(s) 190, 497
Eco130I CCWWGG 1 cut(s) 1487
Eco147I AGGCCT 1 cut(s) 615
Eco24I GRGCYC 1 cut(s) 88
Eco31I GGTCTC 1 cut(s) 1654
Eco47I GGWCC 4 cut(s) 559, 1130, 1211, 1721
Eco57I CTGAAG 3 cut(s) 843, 1333, 1664
Eco88I CYCGRG 3 cut(s) 60, 81, 320
EcoO109I RGGNCCY 1 cut(s) 1211
EcoRI GAATTC 1 cut(s) 1393
EcoRII CCWGG 4 cut(s) 297, 384, 510, 1726
EcoT14I CCWWGG 1 cut(s) 1487
EcoT38I GRGCYC 1 cut(s) 88
EgeI GGCGCC 2 cut(s) 598, 729
EheI GGCGCC 2 cut(s) 598, 729
ErhI CCWWGG 1 cut(s) 1487
Esp3I CGTCTC 2 cut(s) 103, 683
FaeI CATG 4 cut(s) 472, 1433, 1700, 1932
FalI AAGNNNNNCTT 2 cut(s) 1862, 1894
FaqI GGGAC 1 cut(s) 719
FatI CATG 4 cut(s) 468, 1429, 1696, 1928
FauI CCCGC 3 cut(s) 37, 125, 455
FblI GTMKAC 3 cut(s) 423, 890, 935
FokI GGATG 7 cut(s) 32, 356, 491, 1046, 1067, 1435, 1759
FriOI GRGCYC 1 cut(s) 88
FspBI CTAG 5 cut(s) 801, 1269, 1320, 1412, 1488
GlaI GCGC 4 cut(s) 474, 570, 598, 729
GsuI CTGGAG 3 cut(s) 229, 628, 1860
HaeII RGCGCY 4 cut(s) 476, 572, 600, 731
HaeIII GGCC 8 cut(s) 80, 252, 389, 615, 644, 926, 1445, 1855
HapII CCGG 7 cut(s) 77, 434, 645, 702, 731, 1133, 1586
HgaI GACGC 5 cut(s) 256, 274, 385, 409, 484
HhaI GCGC 4 cut(s) 475, 571, 599, 730
Hin1I GRCGYC 6 cut(s) 267, 420, 426, 495, 597, 728
Hin1II CATG 4 cut(s) 472, 1433, 1700, 1932
Hin6I GCGC 4 cut(s) 473, 569, 597, 728
HinP1I GCGC 4 cut(s) 473, 569, 597, 728
HincII GTYRAC 3 cut(s) 382, 424, 1494
HindII GTYRAC 3 cut(s) 382, 424, 1494
HindIII AAGCTT 1 cut(s) 1540
HinfI GANTC 6 cut(s) 194, 206, 840, 1256, 1708, 1757
HpaI GTTAAC 1 cut(s) 1494
HpaII CCGG 7 cut(s) 77, 434, 645, 702, 731, 1133, 1586
HphI GGTGA 8 cut(s) 313, 319, 397, 844, 913, 1337, 1644, 1790
Hpy166II GTNNAC 7 cut(s) 292, 304, 382, 424, 891, 936, 1494
Hpy188I TCNGA 9 cut(s) 43, 193, 593, 1033, 1063, 1450, 1678, 1705, 1864
Hpy188III TCNNGA 8 cut(s) 271, 322, 844, 896, 1178, 1214, 1398, 1839
Hpy8I GTNNAC 7 cut(s) 292, 304, 382, 424, 891, 936, 1494
HpyCH4III ACNGT 1 cut(s) 933
HpyCH4IV ACGT 4 cut(s) 315, 357, 426, 1528
HpyF3I CTNAG 8 cut(s) 10, 744, 1062, 1215, 1578, 1677, 1704, 1863
HpySE526I ACGT 4 cut(s) 315, 357, 426, 1528
Hsp92I GRCGYC 6 cut(s) 267, 420, 426, 495, 597, 728
Hsp92II CATG 4 cut(s) 472, 1433, 1700, 1932
HspAI GCGC 4 cut(s) 473, 569, 597, 728
KasI GGCGCC 2 cut(s) 596, 727
KroI GCCGGC 1 cut(s) 1585
KroNI GCCGGC 1 cut(s) 1587
KspAI GTTAAC 1 cut(s) 1494
KspI CCGCGG 1 cut(s) 418
LmnI GCTCC 3 cut(s) 57, 194, 634
Lsp1109I GCAGC 7 cut(s) 160, 163, 166, 809, 1144, 1147, 1175
LweI GCATC 6 cut(s) 378, 510, 522, 1024, 1045, 1737
MaeI CTAG 5 cut(s) 801, 1269, 1320, 1412, 1488
MaeII ACGT 4 cut(s) 315, 357, 426, 1528
MaeIII GTNAC 6 cut(s) 403, 427, 832, 901, 1529, 1603
MboII GAAGA 8 cut(s) 352, 779, 820, 836, 859, 1244, 1778, 1781
MflI RGATCY 6 cut(s) 38, 462, 588, 787, 856, 1135
MhlI GDGCHC 2 cut(s) 88, 639
MluCI AATT 5 cut(s) 648, 1115, 1393, 1401, 1808
Mly113I GGCGCC 2 cut(s) 597, 728
MlyI GAGTC 2 cut(s) 188, 200
MmeI TCCRAC 3 cut(s) 49, 66, 216
MroNI GCCGGC 1 cut(s) 1585
MseI TTAA 7 cut(s) 813, 875, 1280, 1374, 1493, 1667, 1890
MslI CAYNNNNRTG 1 cut(s) 1899
MspA1I CMGCKG 2 cut(s) 249, 417
MspI CCGG 7 cut(s) 77, 434, 645, 702, 731, 1133, 1586
MspR9I CCNGG 5 cut(s) 299, 386, 512, 703, 1728
MvaI CCWGG 4 cut(s) 299, 386, 512, 1728
MvnI CGCG 3 cut(s) 111, 285, 417
NaeI GCCGGC 1 cut(s) 1587
NarI GGCGCC 2 cut(s) 597, 728
NciI CCSGG 1 cut(s) 703
NgoMIV GCCGGC 1 cut(s) 1585
NlaIII CATG 4 cut(s) 472, 1433, 1700, 1932
NlaIV GGNNCC 9 cut(s) 40, 71, 598, 729, 858, 1137, 1212, 1363, 1590
NmeAIII GCCGAG 3 cut(s) 201, 484, 625
NmuCI GTSAC 6 cut(s) 403, 427, 832, 901, 1529, 1603
NspI RCATGY 1 cut(s) 1700
PceI AGGCCT 1 cut(s) 615
PcsI WCGNNNNNNNCGW 1 cut(s) 267
PdiI GCCGGC 1 cut(s) 1587
PfeI GAWTC 4 cut(s) 840, 1256, 1708, 1757
PflFI GACNNNGTC 1 cut(s) 482
Ple19I CGATCG 1 cut(s) 696
PleI GAGTC 2 cut(s) 188, 200
PluTI GGCGCC 2 cut(s) 600, 731
PpsI GAGTC 2 cut(s) 188, 200
PpuMI RGGWCCY 1 cut(s) 1211
PshAI GACNNNNGTC 1 cut(s) 1601
PshBI ATTAAT 1 cut(s) 813
Psp5II RGGWCCY 1 cut(s) 1211
Psp6I CCWGG 4 cut(s) 297, 384, 510, 1726
PspGI CCWGG 4 cut(s) 297, 384, 510, 1726
PspN4I GGNNCC 9 cut(s) 40, 71, 598, 729, 858, 1137, 1212, 1363, 1590
PspPI GGNCC 5 cut(s) 79, 559, 1130, 1211, 1721
PspPPI RGGWCCY 1 cut(s) 1211
PsrI GAACNNNNNNTAC 2 cut(s) 296, 328
PstI CTGCAG 2 cut(s) 922, 1165
PstNI CAGNNNCTG 1 cut(s) 1862
PsuI RGATCY 6 cut(s) 38, 462, 588, 787, 856, 1135
PsyI GACNNNGTC 1 cut(s) 482
PvuI CGATCG 1 cut(s) 696
RsaI GTAC 4 cut(s) 293, 455, 738, 1171
RsaNI GTAC 4 cut(s) 292, 454, 737, 1170
RseI CAYNNNNRTG 1 cut(s) 1899
SacII CCGCGG 1 cut(s) 418
SalI GTCGAC 1 cut(s) 422
SaqAI TTAA 7 cut(s) 813, 875, 1280, 1374, 1493, 1667, 1890
Sau96I GGNCC 5 cut(s) 79, 559, 1130, 1211, 1721
SchI GAGTC 2 cut(s) 188, 200
ScrFI CCNGG 5 cut(s) 299, 386, 512, 703, 1728
SduI GDGCHC 2 cut(s) 88, 639
SfaNI GCATC 6 cut(s) 378, 510, 522, 1024, 1045, 1737
SfcI CTRYAG 2 cut(s) 918, 1161
SfoI GGCGCC 2 cut(s) 598, 729
Sfr303I CCGCGG 1 cut(s) 418
SgrAI CRCCGGYG 1 cut(s) 730
SgrBI CCGCGG 1 cut(s) 418
SgrDI CGTCGACG 1 cut(s) 422
SinI GGWCC 4 cut(s) 559, 1130, 1211, 1721
SmiMI CAYNNNNRTG 1 cut(s) 1899
SmlI CTYRAG 3 cut(s) 617, 896, 1178
SmoI CTYRAG 3 cut(s) 617, 896, 1178
SpeI ACTAGT 1 cut(s) 1319
Sse9I AATT 5 cut(s) 648, 1115, 1393, 1401, 1808
SseBI AGGCCT 1 cut(s) 615
SspDI GGCGCC 2 cut(s) 596, 727
SspMI CTAG 5 cut(s) 801, 1269, 1320, 1412, 1488
StuI AGGCCT 1 cut(s) 615
StyD4I CCNGG 5 cut(s) 297, 384, 510, 701, 1726
StyI CCWWGG 1 cut(s) 1487
TaaI ACNGT 1 cut(s) 933
TaiI ACGT 4 cut(s) 318, 360, 429, 1531
TaqI TCGA 9 cut(s) 270, 363, 423, 477, 530, 675, 951, 1399, 1571
TaqII GACCGA 1 cut(s) 1662
TasI AATT 5 cut(s) 648, 1115, 1393, 1401, 1808
TfiI GAWTC 4 cut(s) 840, 1256, 1708, 1757
Tru1I TTAA 7 cut(s) 813, 875, 1280, 1374, 1493, 1667, 1890
Tru9I TTAA 7 cut(s) 813, 875, 1280, 1374, 1493, 1667, 1890
TscAI CASTG 3 cut(s) 885, 1372, 1557
TseFI GTSAC 6 cut(s) 403, 427, 832, 901, 1529, 1603
TseI GCWGC 7 cut(s) 148, 151, 154, 797, 1157, 1160, 1163
Tsp45I GTSAC 6 cut(s) 403, 427, 832, 901, 1529, 1603
TspDTI ATGAA 4 cut(s) 1220, 1235, 1418, 1779
TspGWI ACGGA 4 cut(s) 479, 780, 884, 1701
TspRI CASTG 3 cut(s) 885, 1372, 1557
Tth111I GACNNNGTC 1 cut(s) 482
VpaK11BI GGWCC 4 cut(s) 559, 1130, 1211, 1721
VspI ATTAAT 1 cut(s) 813
XapI RAATTY 2 cut(s) 1393, 1808
XceI RCATGY 1 cut(s) 1700
XcmI CCANNNNNNNNNTGG 1 cut(s) 32
XmaJI CCTAGG 1 cut(s) 1487
XmiI GTMKAC 3 cut(s) 423, 890, 935
XspI CTAG 5 cut(s) 801, 1269, 1320, 1412, 1488
ZraI GACGTC 1 cut(s) 427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.