FvH4_5g30570

clathrin assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0014227
Physical Location & Seq
Forward (+)
21462465 .. 21465206
2742 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g30570.t1

Sequence Viewer

Length: 1428 bp
ATGGCTTCAAGTAAATTCAGAAGAGCCTTAGGTGCCGTGAAGGACCAAACTAGCATTGGCCTTGCCAAAGTTGGCAGCAGCAATTCTCTAGCGGACCTCGACGTTGCCATTGTTAAGGCTACGAGGCATGAAGAATACCCAACCGAAGAGAAATACATAAGAGAGATTCTTAGCTTAACATGCTACTCACGCGCATACATCAGTGCCTGTGTCAACACCATCTCCAGGCGCCTCAACAAAACCAAGAACTGGATTGTTGCCCTCAAAACCCTCATGTTGATCCAACGCCTGCTTTCCGAGGGTGATCCTGCATATGAACAAGAGATATTCTTCTCCACAAGACGTGGCACTAGGTTTCTTAACATGTCTGATTTTAGGGACACTTCTGGCTCCAATACATGGGACTACTCTGCCTTTGTGCGCACGTATGCATTGTACCTCGACGAACGGCTCGAGTTTCGAATGCAAAGCCGACGTGGGAAACGCAGTGTGTTCGGAGTAATAGATGACGAGGAGGCAGAACCGGTACCGGAGCAAAATGGTAACCAGCAAGTGTGTAATAGGGCTACACCTGTGCATGAAATGAGGCACGATAAGTTGTTTTCAAGGATGCAACATTTGCAGCAGCTCCTTGAACGGTTTCTAGCGACACGTCCAACAGGTGAAGCGAAGAACAACAGGGTTATAATAGTTGCCCTATACCTGCTAGTGAAAGAGAGCTTCCAAATATATTATGACGTAACAGAGATAATGGGGATCTTCATCGACCGCTTCATGGAGCTTGAGGTCCCCGACGGTGTCAAAGTCTACGAAGTATTCGTTCGCATCGGAAAGCAATTTGACGAGCTTGACGTGTTCTACAGCTGGTGTAAGAACGTCGGCATTGCACGCAGCTCCGAGTACCCCGATGTCGAGAGAATCACACCCAAGAAGCTCGAGGTGATGGACGAGTACATTCGAGACAAGTCGGCTATGGAGCAAGGCCGGAAAGTAATTAGGGCACTAGAGCCGAGAGGTGACTCCCCTGTGTCTGTGGAGTCCAAAGAAGAACCAGACATGAACTCCATTAAAGCACTACCAGCGCCGGAAGACGTCGCGGAGGCTCCGGTGGAGGAAGAGAAGGAAGAAGAACCGGTTGTGGAGAAAGAAGAACCGAAGAAACAAGACGTGGGTGATTTGTTGAACTTGGGAGAAGACGCCGGCTCTAGTGAACAACAAGGTGACAAACTAGCGTTGGCATTGTTCAATGGGGAGGAGGGTGCTACGACCTCACAACGGGTCCGCAACCGTGGGAGGCGTTTTCTGAGGAAGCCGATTGGGAAAAGGCTCTTGTCCAATCTGCAACTCACTTGCCAAATCAGAAGACCTCTCTCGGAGGAGGGTTCGACTTGTTGCTACTGGACGGAATGTACCAACAAGCTCAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

476

Amino Acids

54.51

Weight (kDa)

5.79

Isoelectric Point (pI)

51.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 32 - 321 3.5e-89 ANTH domain
ENTH PF01417 34 - 145 1.2e-06 ENTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03050
fragaria_vesca FvH4_5g30570 FvH4_5g30590
malus_domestica MD08G1222400.v1.1 MD15G1415800.v1.1
prunus_persica Prupe.1G560200_v2.0.a1
pyrus_communis pycom15g36900
rosa_chinensis RchiOBHm_Chr7g0225461
rosa_laevigata RLG00000001817
rosa_multiflora Rmu_sc0000259.1_g000009
rosa_roxburghii Rroxscaffold_3G00233800
rosa_rugosa Rorug07G0229600.1
rosa_samantha Rh7AG373600 Rh7BG364300 Rh7CG391700 Rh7DG375500
rosa_wichuraiana Rw7G031680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 686
AatII GACGTC 1 cut(s) 1095
Acc16I TGCGCA 1 cut(s) 422
Acc36I ACCTGC 1 cut(s) 711
Acc65I GGTACC 1 cut(s) 526
AccB1I GGYRCC 3 cut(s) 32, 228, 526
AccB7I CCANNNNNTGG 2 cut(s) 249, 399
AccI GTMKAC 1 cut(s) 807
AccII CGCG 2 cut(s) 192, 1097
AciI CCGC 4 cut(s) 92, 769, 1097, 1282
AclWI GGATC 3 cut(s) 274, 299, 764
AcsI RAATTY 1 cut(s) 14
AcyI GRCGYC 3 cut(s) 229, 1092, 1197
AfaI GTAC 5 cut(s) 437, 528, 902, 953, 1411
AfiI CCNNNNNNNGG 5 cut(s) 225, 249, 399, 775, 1275
AflIII ACRYGT 3 cut(s) 363, 650, 852
AgeI ACCGGT 2 cut(s) 523, 1132
AgsI TTSAA 5 cut(s) 9, 606, 635, 1183, 1246
AjiI CACGTC 5 cut(s) 344, 476, 653, 853, 1168
AjnI CCWGG 1 cut(s) 224
AluBI AGCT 9 cut(s) 174, 628, 720, 781, 847, 864, 894, 934, 1420
AluI AGCT 9 cut(s) 174, 628, 720, 781, 847, 864, 894, 934, 1420
Alw26I GTCTC 1 cut(s) 954
AlwI GGATC 3 cut(s) 274, 299, 764
AlwNI CAGNNNCTG 1 cut(s) 207
Ama87I CYCGRG 2 cut(s) 452, 935
AoxI GGCC 2 cut(s) 58, 982
ApeKI GCWGC 5 cut(s) 75, 78, 622, 625, 891
ApoI RAATTY 1 cut(s) 14
AsiGI ACCGGT 2 cut(s) 523, 1132
Asp700I GAANNNNTTC 1 cut(s) 639
Asp718I GGTACC 1 cut(s) 526
AspLEI GCGC 4 cut(s) 194, 231, 423, 1084
AspS9I GGNCC 4 cut(s) 43, 94, 787, 1279
AsuHPI GGTGA 6 cut(s) 314, 674, 952, 1028, 1184, 1232
AsuII TTCGAA 1 cut(s) 460
AvaI CYCGRG 2 cut(s) 452, 935
AvaII GGWCC 4 cut(s) 43, 94, 787, 1279
AxyI CCTNAGG 1 cut(s) 28
BaeGI GKGCMC 1 cut(s) 1003
BanI GGYRCC 3 cut(s) 32, 228, 526
BbsI GAAGAC 3 cut(s) 1095, 1200, 1369
BbvI GCAGC 5 cut(s) 87, 90, 634, 637, 903
BccI CCATC 2 cut(s) 227, 937
BceAI ACGGC 2 cut(s) 20, 464
BcgI CGANNNNNNTGC 2 cut(s) 475, 509
BciT130I CCWGG 1 cut(s) 226
BcoDI GTCTC 1 cut(s) 954
BfaI CTAG 8 cut(s) 51, 89, 351, 644, 707, 1004, 1206, 1229
BfmI CTRYAG 1 cut(s) 859
BfoI RGCGCY 2 cut(s) 232, 1085
BfuAI ACCTGC 1 cut(s) 711
BisI GCNGC 5 cut(s) 76, 79, 623, 626, 892
BlsI GCNGC 5 cut(s) 77, 80, 624, 627, 893
Bme1390I CCNGG 1 cut(s) 226
Bme18I GGWCC 4 cut(s) 43, 94, 787, 1279
BmeT110I CYCGRG 2 cut(s) 452, 935
BmgBI CACGTC 5 cut(s) 344, 476, 653, 853, 1168
BmgT120I GGNCC 4 cut(s) 43, 94, 787, 1279
BmiI GGNNCC 7 cut(s) 34, 230, 391, 528, 789, 1104, 1280
BmrFI CCNGG 1 cut(s) 226
BmsI GCATC 2 cut(s) 600, 834
BpiI GAAGAC 3 cut(s) 1095, 1200, 1369
BpmI CTGGAG 1 cut(s) 208
Bpu10I CCTNAGC 1 cut(s) 1421
Bpu14I TTCGAA 1 cut(s) 460
BpuEI CTTGAG 1 cut(s) 803
BsaAI YACGTR 1 cut(s) 426
BsaBI GATNNNNATC 1 cut(s) 761
BsaHI GRCGYC 3 cut(s) 229, 1092, 1197
BsaJI CCNNGG 2 cut(s) 297, 1288
BsaWI WCCGGW 4 cut(s) 523, 529, 1105, 1132
BsaXI ACNNNNNCTCC 4 cut(s) 206, 236, 1046, 1076
Bsc4I CCNNNNNNNGG 5 cut(s) 225, 249, 399, 775, 1275
Bse118I RCCGGY 3 cut(s) 523, 1132, 1199
Bse1I ACTGG 2 cut(s) 254, 1403
Bse21I CCTNAGG 1 cut(s) 28
Bse3DI GCAATG 1 cut(s) 882
Bse8I GATNNNNATC 1 cut(s) 761
BseBI CCWGG 1 cut(s) 226
BseDI CCNNGG 2 cut(s) 297, 1288
BseGI GGATG 1 cut(s) 615
BseJI GATNNNNATC 1 cut(s) 761
BseLI CCNNNNNNNGG 5 cut(s) 225, 249, 399, 775, 1275
BseMI GCAATG 1 cut(s) 882
BseMII CTCAG 1 cut(s) 1295
BseNI ACTGG 2 cut(s) 254, 1403
BseRI GAGGAG 3 cut(s) 527, 1268, 1391
BseSI GKGCMC 1 cut(s) 1003
BseXI GCAGC 5 cut(s) 87, 90, 634, 637, 903
Bsh1236I CGCG 2 cut(s) 192, 1097
Bsh1285I CGRYCG 1 cut(s) 769
BshFI GGCC 2 cut(s) 60, 984
BshNI GGYRCC 3 cut(s) 32, 228, 526
BshTI ACCGGT 2 cut(s) 523, 1132
BsiEI CGRYCG 1 cut(s) 769
BsiHKCI CYCGRG 2 cut(s) 452, 935
BsiSI CCGG 7 cut(s) 524, 530, 985, 1085, 1106, 1133, 1200
BslFI GGGAC 3 cut(s) 392, 416, 773
BslI CCNNNNNNNGG 5 cut(s) 225, 249, 399, 775, 1275
BsmAI GTCTC 1 cut(s) 954
BsmFI GGGAC 3 cut(s) 392, 416, 773
BsmI GAATGC 1 cut(s) 468
BsnI GGCC 2 cut(s) 60, 984
BsoBI CYCGRG 2 cut(s) 452, 935
Bsp119I TTCGAA 1 cut(s) 460
Bsp1286I GDGCHC 1 cut(s) 1003
Bsp143I GATC 3 cut(s) 279, 304, 756
BspACI CCGC 4 cut(s) 92, 769, 1097, 1282
BspANI GGCC 2 cut(s) 60, 984
BspCNI CTCAG 1 cut(s) 1296
BspFNI CGCG 2 cut(s) 192, 1097
BspLI GGNNCC 7 cut(s) 34, 230, 391, 528, 789, 1104, 1280
BspMI ACCTGC 1 cut(s) 711
BspPI GGATC 3 cut(s) 274, 299, 764
BspQI GCTCTTC 1 cut(s) 16
BspT104I TTCGAA 1 cut(s) 460
BspT107I GGYRCC 3 cut(s) 32, 228, 526
BsrDI GCAATG 1 cut(s) 882
BsrFI RCCGGY 3 cut(s) 523, 1132, 1199
BsrI ACTGG 2 cut(s) 254, 1403
BssAI RCCGGY 3 cut(s) 523, 1132, 1199
BssECI CCNNGG 2 cut(s) 297, 1288
BssMI GATC 3 cut(s) 279, 304, 756
BssNI GRCGYC 3 cut(s) 229, 1092, 1197
Bst2UI CCWGG 1 cut(s) 226
Bst4CI ACNGT 3 cut(s) 639, 797, 1289
Bst6I CTCTTC 3 cut(s) 16, 141, 1110
BstACI GRCGYC 3 cut(s) 229, 1092, 1197
BstAPI GCANNNNNTGC 1 cut(s) 619
BstBAI YACGTR 1 cut(s) 426
BstBI TTCGAA 1 cut(s) 460
BstC8I GCNNGC 3 cut(s) 290, 889, 1201
BstDEI CTNAG 4 cut(s) 28, 170, 1304, 1421
BstDSI CCRYGG 1 cut(s) 1288
BstEII GGTNACC 1 cut(s) 542
BstF5I GGATG 1 cut(s) 615
BstFNI CGCG 2 cut(s) 192, 1097
BstH2I RGCGCY 2 cut(s) 232, 1085
BstHHI GCGC 4 cut(s) 194, 231, 423, 1084
BstKTI GATC 3 cut(s) 282, 307, 759
BstMAI GTCTC 1 cut(s) 954
BstMBI GATC 3 cut(s) 279, 304, 756
BstMCI CGRYCG 1 cut(s) 769
BstMWI GCNNNNNNNGC 6 cut(s) 32, 180, 189, 619, 888, 1079
BstNI CCWGG 1 cut(s) 226
BstNSI RCATGY 2 cut(s) 183, 367
BstPI GGTNACC 1 cut(s) 542
BstSCI CCNGG 1 cut(s) 224
BstSFI CTRYAG 1 cut(s) 859
BstSLI GKGCMC 1 cut(s) 1003
BstUI CGCG 2 cut(s) 192, 1097
BstV1I GCAGC 5 cut(s) 87, 90, 634, 637, 903
BstV2I GAAGAC 3 cut(s) 1095, 1200, 1369
BstX2I RGATCY 1 cut(s) 756
BstYI RGATCY 1 cut(s) 756
Bsu36I CCTNAGG 1 cut(s) 28
BsuRI GGCC 2 cut(s) 60, 984
BtgI CCRYGG 1 cut(s) 1288
BtrI CACGTC 5 cut(s) 344, 476, 653, 853, 1168
BtsCI GGATG 1 cut(s) 615
BtsI GCAGTG 1 cut(s) 493
BtsIMutI CAGTG 2 cut(s) 208, 493
BveI ACCTGC 1 cut(s) 711
Cac8I GCNNGC 3 cut(s) 290, 889, 1201
CaiI CAGNNNCTG 1 cut(s) 207
CfoI GCGC 4 cut(s) 194, 231, 423, 1084
Cfr10I RCCGGY 3 cut(s) 523, 1132, 1199
Cfr13I GGNCC 4 cut(s) 43, 94, 787, 1279
CseI GACGC 1 cut(s) 1205
Csp6I GTAC 5 cut(s) 436, 527, 901, 952, 1410
CspAI ACCGGT 2 cut(s) 523, 1132
CviAII CATG 8 cut(s) 128, 180, 274, 364, 399, 578, 775, 1057
CviQI GTAC 5 cut(s) 436, 527, 901, 952, 1410
DdeI CTNAG 4 cut(s) 28, 170, 1304, 1421
DinI GGCGCC 1 cut(s) 230
DpnI GATC 3 cut(s) 281, 306, 758
DpnII GATC 3 cut(s) 279, 304, 756
Eam1104I CTCTTC 3 cut(s) 16, 141, 1110
EarI CTCTTC 3 cut(s) 16, 141, 1110
Eco47I GGWCC 4 cut(s) 43, 94, 787, 1279
Eco81I CCTNAGG 1 cut(s) 28
Eco88I CYCGRG 2 cut(s) 452, 935
Eco91I GGTNACC 1 cut(s) 542
EcoO109I RGGNCCY 1 cut(s) 787
EcoO65I GGTNACC 1 cut(s) 542
EcoRII CCWGG 1 cut(s) 224
EcoT22I ATGCAT 1 cut(s) 433
EgeI GGCGCC 1 cut(s) 230
EheI GGCGCC 1 cut(s) 230
FaeI CATG 8 cut(s) 131, 183, 277, 367, 402, 581, 778, 1060
FaqI GGGAC 3 cut(s) 392, 416, 773
FatI CATG 8 cut(s) 127, 179, 273, 363, 398, 577, 774, 1056
FauNDI CATATG 1 cut(s) 313
FblI GTMKAC 1 cut(s) 807
Fnu4HI GCNGC 5 cut(s) 76, 79, 623, 626, 892
FokI GGATG 1 cut(s) 622
Fsp4HI GCNGC 5 cut(s) 76, 79, 623, 626, 892
FspAI RTGCGCAY 1 cut(s) 422
FspBI CTAG 8 cut(s) 51, 89, 351, 644, 707, 1004, 1206, 1229
FspI TGCGCA 1 cut(s) 422
GlaI GCGC 4 cut(s) 193, 230, 422, 1083
GluI GCNGC 5 cut(s) 76, 79, 623, 626, 892
GsuI CTGGAG 1 cut(s) 208
HaeII RGCGCY 2 cut(s) 232, 1085
HaeIII GGCC 2 cut(s) 60, 984
HapII CCGG 7 cut(s) 524, 530, 985, 1085, 1106, 1133, 1200
HgaI GACGC 1 cut(s) 1205
HhaI GCGC 4 cut(s) 194, 231, 423, 1084
Hin1I GRCGYC 3 cut(s) 229, 1092, 1197
Hin1II CATG 8 cut(s) 131, 183, 277, 367, 402, 581, 778, 1060
Hin6I GCGC 4 cut(s) 192, 229, 421, 1082
HinP1I GCGC 4 cut(s) 192, 229, 421, 1082
HincII GTYRAC 1 cut(s) 214
HindII GTYRAC 1 cut(s) 214
HinfI GANTC 4 cut(s) 166, 918, 1019, 1037
HpaII CCGG 7 cut(s) 524, 530, 985, 1085, 1106, 1133, 1200
HphI GGTGA 6 cut(s) 314, 674, 952, 1028, 1184, 1232
Hpy166II GTNNAC 3 cut(s) 214, 808, 1211
Hpy188I TCNGA 9 cut(s) 20, 298, 370, 497, 830, 898, 1305, 1361, 1375
Hpy188III TCNNGA 2 cut(s) 913, 959
Hpy8I GTNNAC 3 cut(s) 214, 808, 1211
Hpy99I CGWCG 6 cut(s) 104, 446, 477, 797, 881, 1097
HpyAV CCTTC 2 cut(s) 34, 1114
HpyCH4III ACNGT 3 cut(s) 639, 797, 1289
HpyCH4V TGCA 8 cut(s) 311, 431, 466, 577, 613, 622, 887, 1342
HpyF10VI GCNNNNNNNGC 6 cut(s) 32, 180, 189, 619, 888, 1079
HpyF3I CTNAG 4 cut(s) 28, 170, 1304, 1421
Hsp92I GRCGYC 3 cut(s) 229, 1092, 1197
Hsp92II CATG 8 cut(s) 131, 183, 277, 367, 402, 581, 778, 1060
HspAI GCGC 4 cut(s) 192, 229, 421, 1082
KasI GGCGCC 1 cut(s) 228
KpnI GGTACC 1 cut(s) 530
KroI GCCGGC 1 cut(s) 1199
KroNI GCCGGC 1 cut(s) 1201
Kzo9I GATC 3 cut(s) 279, 304, 756
LguI GCTCTTC 1 cut(s) 16
LmnI GCTCC 7 cut(s) 395, 532, 633, 778, 899, 976, 1108
Lsp1109I GCAGC 5 cut(s) 87, 90, 634, 637, 903
LweI GCATC 2 cut(s) 600, 834
MaeI CTAG 8 cut(s) 51, 89, 351, 644, 707, 1004, 1206, 1229
MaeIII GTNAC 4 cut(s) 542, 739, 1016, 1220
MalI GATC 3 cut(s) 281, 306, 758
MboI GATC 3 cut(s) 279, 304, 756
MflI RGATCY 1 cut(s) 756
MhlI GDGCHC 1 cut(s) 1003
MluCI AATT 4 cut(s) 14, 82, 836, 993
Mly113I GGCGCC 1 cut(s) 229
MlyI GAGTC 2 cut(s) 1013, 1046
MmeI TCCRAC 2 cut(s) 307, 680
Mph1103I ATGCAT 1 cut(s) 433
MroNI GCCGGC 1 cut(s) 1199
MroXI GAANNNNTTC 1 cut(s) 639
MseI TTAA 4 cut(s) 114, 176, 360, 1068
MspA1I CMGCKG 1 cut(s) 864
MspI CCGG 7 cut(s) 524, 530, 985, 1085, 1106, 1133, 1200
MspR9I CCNGG 1 cut(s) 226
Mva1269I GAATGC 1 cut(s) 468
MvaI CCWGG 1 cut(s) 226
MvnI CGCG 2 cut(s) 192, 1097
MwoI GCNNNNNNNGC 6 cut(s) 32, 180, 189, 619, 888, 1079
NaeI GCCGGC 1 cut(s) 1201
NarI GGCGCC 1 cut(s) 229
NdeI CATATG 1 cut(s) 313
NdeII GATC 3 cut(s) 279, 304, 756
NgoMIV GCCGGC 1 cut(s) 1199
NlaIII CATG 8 cut(s) 131, 183, 277, 367, 402, 581, 778, 1060
NlaIV GGNNCC 7 cut(s) 34, 230, 391, 528, 789, 1104, 1280
NmeAIII GCCGAG 1 cut(s) 1035
NmuCI GTSAC 2 cut(s) 1016, 1220
NsbI TGCGCA 1 cut(s) 422
NsiI ATGCAT 1 cut(s) 433
NspI RCATGY 2 cut(s) 183, 367
NspV TTCGAA 1 cut(s) 460
PaeR7I CTCGAG 2 cut(s) 452, 935
PciI ACATGT 1 cut(s) 363
PciSI GCTCTTC 1 cut(s) 16
PcsI WCGNNNNNNNCGW 3 cut(s) 450, 816, 849
PctI GAATGC 1 cut(s) 468
PdiI GCCGGC 1 cut(s) 1201
PdmI GAANNNNTTC 1 cut(s) 639
PfeI GAWTC 2 cut(s) 166, 918
PflFI GACNNNGTC 1 cut(s) 797
PflMI CCANNNNNTGG 2 cut(s) 249, 399
PinAI ACCGGT 2 cut(s) 523, 1132
PkrI GCNGC 5 cut(s) 77, 80, 624, 627, 893
PleI GAGTC 2 cut(s) 1013, 1045
PluTI GGCGCC 1 cut(s) 232
PpsI GAGTC 2 cut(s) 1013, 1045
Ppu21I YACGTR 1 cut(s) 426
PpuMI RGGWCCY 1 cut(s) 787
PscI ACATGT 1 cut(s) 363
PsiI TTATAA 1 cut(s) 686
Psp5II RGGWCCY 1 cut(s) 787
Psp6I CCWGG 1 cut(s) 224
PspEI GGTNACC 1 cut(s) 542
PspGI CCWGG 1 cut(s) 224
PspN4I GGNNCC 7 cut(s) 34, 230, 391, 528, 789, 1104, 1280
PspPI GGNCC 4 cut(s) 43, 94, 787, 1279
PspPPI RGGWCCY 1 cut(s) 787
PspXI VCTCGAGB 2 cut(s) 452, 935
PstNI CAGNNNCTG 1 cut(s) 207
PsuI RGATCY 1 cut(s) 756
PsyI GACNNNGTC 1 cut(s) 797
PvuII CAGCTG 1 cut(s) 864
RsaI GTAC 5 cut(s) 437, 528, 902, 953, 1411
RsaNI GTAC 5 cut(s) 436, 527, 901, 952, 1410
SapI GCTCTTC 1 cut(s) 16
SaqAI TTAA 4 cut(s) 114, 176, 360, 1068
SatI GCNGC 5 cut(s) 76, 79, 623, 626, 892
Sau3AI GATC 3 cut(s) 279, 304, 756
Sau96I GGNCC 4 cut(s) 43, 94, 787, 1279
SchI GAGTC 2 cut(s) 1013, 1046
ScrFI CCNGG 1 cut(s) 226
SduI GDGCHC 1 cut(s) 1003
SfaNI GCATC 2 cut(s) 600, 834
SfcI CTRYAG 1 cut(s) 859
SfoI GGCGCC 1 cut(s) 230
Sfr274I CTCGAG 2 cut(s) 452, 935
SfuI TTCGAA 1 cut(s) 460
SinI GGWCC 4 cut(s) 43, 94, 787, 1279
SlaI CTCGAG 2 cut(s) 452, 935
SmlI CTYRAG 3 cut(s) 452, 782, 935
SmoI CTYRAG 3 cut(s) 452, 782, 935
Sse9I AATT 4 cut(s) 14, 82, 836, 993
SsiI CCGC 4 cut(s) 92, 769, 1097, 1282
SspDI GGCGCC 1 cut(s) 228
SspMI CTAG 8 cut(s) 51, 89, 351, 644, 707, 1004, 1206, 1229
StyD4I CCNGG 1 cut(s) 224
TaaI ACNGT 3 cut(s) 639, 797, 1289
TaqI TCGA 9 cut(s) 99, 441, 453, 460, 765, 912, 936, 958, 1385
TasI AATT 4 cut(s) 14, 82, 836, 993
TatI WGTACW 1 cut(s) 951
TfiI GAWTC 2 cut(s) 166, 918
Tru1I TTAA 4 cut(s) 114, 176, 360, 1068
Tru9I TTAA 4 cut(s) 114, 176, 360, 1068
TscAI CASTG 2 cut(s) 208, 493
TseFI GTSAC 2 cut(s) 1016, 1220
TseI GCWGC 5 cut(s) 75, 78, 622, 625, 891
Tsp45I GTSAC 2 cut(s) 1016, 1220
TspDTI ATGAA 6 cut(s) 144, 330, 594, 751, 763, 1073
TspGWI ACGGA 1 cut(s) 1418
TspRI CASTG 2 cut(s) 208, 493
Tth111I GACNNNGTC 1 cut(s) 797
Van91I CCANNNNNTGG 2 cut(s) 249, 399
VpaK11BI GGWCC 4 cut(s) 43, 94, 787, 1279
XapI RAATTY 1 cut(s) 14
XceI RCATGY 2 cut(s) 183, 367
XcmI CCANNNNNNNNNTGG 1 cut(s) 53
XhoI CTCGAG 2 cut(s) 452, 935
XmiI GTMKAC 1 cut(s) 807
XmnI GAANNNNTTC 1 cut(s) 639
XspI CTAG 8 cut(s) 51, 89, 351, 644, 707, 1004, 1206, 1229
ZraI GACGTC 1 cut(s) 1093
Zsp2I ATGCAT 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.