MD15G1415800.v1.1

clathrin assembly

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0014227
Physical Location & Seq
Forward (+)
51708476 .. 51710908
2433 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1415800.v1.1.491

Sequence Viewer

Length: 1806 bp
ATGGCTTCAAGCAAATTTAGAAGAGCCTTGGATGCGGTGAAGGACCAAACCAGCATAGGCCTCGCCAAAGTCGGTAGCAGCACCTCTTTGGCGGACCTAGACGTTGCCATTGTGAAAGCAACAACGCACGAAGAATACCCGACCGAAGAGAAATACCTACGAGAAATTCTCAGCCTAACATGCTATTCGCGTGCCTTCATCAGCGCTTGTGTCAACACCATCTCCCGGCGCCTCAACAAGACCAAAAACTGGATCGTGGCTCTCAAGACCCTCATGTTAGTCCAACGACTGCTGACCGAGGGTGACCCTGCTTATGAACAAGAAATATTTTTCTCCACAAGGCGCGGCACTCGCTTTCTCAACATGTCTGATTTTCGTGACACCTCGCGCTCCAATTCTTGGGACCATTCTGCGTTTGTGCGCACGTATGCATTGTATCTAGACCAACGGCTTGAGTTCCGAATGCAAAGCCGGCGTGGGAAACGCAGTGCATTTGGGTTTGATGAAGATATTGAAGATCCTCAGGAGGAGGCTAATAATTTTACCAACCAGCAGTCATGTCAGAGAGCCACACCGGTGCATGAAATGAAAGCTGACAAGTTGTTTTCTAGGATGCAGCATTTGCAGCAGCTCCTTGAGCGATTTTTAGGATGTCGCCCAACAGGTGTAGCAAAGAACAACAGGGTTGTAATAGTGGCCTTGTACGCGATAGTAAAAGAGAGTTTCCAGATATATAATGACATAACAGAAATAATGGGCATCTTAATCGACCGCTTCATGGAGCTGGAGATCCCTGACTGTGCCAAGGTGTACGAGATCTTCTGCCGCATCGGAAAGCAATTTGATGAGTTGGACATGTTCTACGGGTGGTGTAAACAAATCGGCATTGCGCGCTCCTCAGAGTACCCGGAGGTTGAGAAGATTACACCCAAGAAGCTCGAGGTTATGGACGACTACATACGTGACAAGTCAGCTTTGGCACAAGGCAAGAGGTCGGTAAAGGCACTACTAGACCAACAAAAGATTGATGAGGCAAACAAAGATGAAGAATCAAATCATGGCGGCGAAGAAGAAGAAGAAGACATGAACGCCATGAAGGCCCTGCCACCGCCAGAGGGTTTCGTTGAGGAAAGCAATAACAAGGAGATAGAACCAGTCAAGGAAGAGGAAATTAAGAAACCGCAACAAGAAGAAGGCGATCTGTTGAACTTGGGAGAAGATGCTTTGTCGAGCAATGAACACGCTGACAAATTGGCGTTGGCTTTGTTCAACGGCGCCACTGAACAAGCACCAGCAGGTCTACCGGCATGGGAAGCTTTTGCTGACGAAGCTGATTGGGAAACGGCGTTAGTCCAGTCCGCAAGCCACTTGTCGAATCAGAAGGCTTCCCTCGGGGGCGGTTTTGACTTGCTGTTGCTGGACGGAATGTACCAGCAAGCGGAGATATCAGCCGCGATGGCAGGCCCAGGGTATGGAGTTAGTGGCAGTGCGAGTAGTGTTGCATTAGGGTCAGCAGGACGGCCTGCAATGCTAGCATTGCCTGCACCACCAACATCATCGTCTTCGTCAAATCATCCTAGTGAGTCAAATGTACATGTAGACCCTTTTGCTGCTTCGTTAGTGGTACCGCCGCCATCATATGTGCAAATGTCAGACCTGGAGAAGAAGCAGAAGCTGTTGATGGACGAGCAGTTCATGTGGCAGCAGTATGCAAGGGGTGGGATGCAAGGGCAGGTTGGATTGACAAAGCTACAGCATAACCCTCATCACAACATAAACATGGGAGGTTACACACACACCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANTH

Protein Analysis

602

Amino Acids

67.29

Weight (kDa)

5.14

Isoelectric Point (pI)

55.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 32 - 322 1.5e-89 ANTH domain
ENTH PF01417 34 - 146 3.2e-07 ENTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014227)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03050
fragaria_vesca FvH4_5g30570 FvH4_5g30590
malus_domestica MD08G1222400.v1.1 MD15G1415800.v1.1
prunus_persica Prupe.1G560200_v2.0.a1
pyrus_communis pycom15g36900
rosa_chinensis RchiOBHm_Chr7g0225461
rosa_laevigata RLG00000001817
rosa_multiflora Rmu_sc0000259.1_g000009
rosa_roxburghii Rroxscaffold_3G00233800
rosa_rugosa Rorug07G0229600.1
rosa_samantha Rh7AG373600 Rh7BG364300 Rh7CG391700 Rh7DG375500
rosa_wichuraiana Rw7G031680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 422
Acc36I ACCTGC 2 cut(s) 1286, 1723
Acc65I GGTACC 1 cut(s) 1624
AccB1I GGYRCC 3 cut(s) 228, 1274, 1624
AccB7I CCANNNNNTGG 3 cut(s) 249, 399, 1472
AccI GTMKAC 2 cut(s) 1300, 1599
AccII CGCG 6 cut(s) 190, 345, 388, 707, 892, 1454
AclWI GGATC 3 cut(s) 260, 512, 784
AcsI RAATTY 2 cut(s) 14, 165
AcyI GRCGYC 2 cut(s) 229, 1275
AfaI GTAC 6 cut(s) 704, 812, 905, 1430, 1593, 1626
AfeI AGCGCT 1 cut(s) 205
AfiI CCNNNNNNNGG 7 cut(s) 225, 249, 399, 778, 1115, 1438, 1472
AflIII ACRYGT 3 cut(s) 363, 855, 1594
AgeI ACCGGT 1 cut(s) 574
AgsI TTSAA 4 cut(s) 9, 515, 1207, 1270
AjnI CCWGG 2 cut(s) 1465, 1656
AleI CACNNNNGTG 1 cut(s) 575
AloI GAACNNNNNNTCC 2 cut(s) 1676, 1708
AluBI AGCT 9 cut(s) 593, 631, 784, 937, 974, 1316, 1331, 1675, 1750
AluI AGCT 9 cut(s) 593, 631, 784, 937, 974, 1316, 1331, 1675, 1750
AlwI GGATC 3 cut(s) 260, 512, 784
AlwNI CAGNNNCTG 1 cut(s) 1675
Ama87I CYCGRG 2 cut(s) 938, 1391
Aor51HI AGCGCT 1 cut(s) 205
AoxI GGCC 5 cut(s) 58, 696, 1098, 1462, 1520
ApeKI GCWGC 6 cut(s) 78, 616, 625, 628, 1610, 1702
ApoI RAATTY 2 cut(s) 14, 165
AsiGI ACCGGT 1 cut(s) 574
Asp718I GGTACC 1 cut(s) 1624
AspLEI GCGC 8 cut(s) 206, 231, 345, 390, 423, 892, 894, 1277
AspS9I GGNCC 5 cut(s) 43, 94, 403, 1099, 1463
AsuC2I CCSGG 2 cut(s) 226, 908
AsuHPI GGTGA 2 cut(s) 49, 314
AsuNHI GCTAGC 1 cut(s) 1531
AvaI CYCGRG 2 cut(s) 938, 1391
AvaII GGWCC 3 cut(s) 43, 94, 403
AxyI CCTNAGG 1 cut(s) 522
BanI GGYRCC 3 cut(s) 228, 1274, 1624
BarI GAAGNNNNNNTAC 2 cut(s) 803, 835
BbsI GAAGAC 2 cut(s) 1086, 1554
BbvI GCAGC 6 cut(s) 90, 628, 637, 640, 1597, 1714
BccI CCATC 4 cut(s) 227, 1450, 1642, 1675
BceAI ACGGC 4 cut(s) 464, 1288, 1359, 1535
BcgI CGANNNNNNTGC 4 cut(s) 43, 77, 748, 782
BciT130I CCWGG 2 cut(s) 1467, 1658
BcnI CCSGG 2 cut(s) 226, 908
BfaI CTAG 6 cut(s) 98, 440, 609, 1010, 1532, 1578
BfmI CTRYAG 1 cut(s) 1751
BfoI RGCGCY 3 cut(s) 207, 232, 1278
BfuAI ACCTGC 2 cut(s) 1286, 1723
BglI GCCNNNNNGGC 2 cut(s) 1097, 1457
BglII AGATCT 1 cut(s) 816
Bme1390I CCNGG 4 cut(s) 226, 908, 1467, 1658
Bme18I GGWCC 3 cut(s) 43, 94, 403
BmeT110I CYCGRG 2 cut(s) 938, 1391
BmgT120I GGNCC 5 cut(s) 43, 94, 403, 1099, 1463
BmiI GGNNCC 4 cut(s) 230, 404, 1276, 1626
BmrFI CCNGG 4 cut(s) 226, 908, 1467, 1658
BmsI GCATC 6 cut(s) 22, 603, 768, 837, 1210, 1713
BmtI GCTAGC 1 cut(s) 1535
BpiI GAAGAC 2 cut(s) 1086, 1554
BplI GAGNNNNNCTC 2 cut(s) 153, 185
BpmI CTGGAG 2 cut(s) 806, 1679
BpuEI CTTGAG 3 cut(s) 248, 473, 656
BpuMI CCSGG 2 cut(s) 226, 908
BsaAI YACGTR 2 cut(s) 426, 962
BsaHI GRCGYC 2 cut(s) 229, 1275
BsaJI CCNNGG 6 cut(s) 27, 297, 804, 1390, 1465, 1466
BsaWI WCCGGW 1 cut(s) 574
BsaXI ACNNNNNCTCC 2 cut(s) 206, 236
Bsc4I CCNNNNNNNGG 7 cut(s) 225, 249, 399, 778, 1115, 1438, 1472
Bse118I RCCGGY 3 cut(s) 471, 574, 1303
Bse1I ACTGG 3 cut(s) 254, 1154, 1354
Bse21I CCTNAGG 1 cut(s) 522
Bse3DI GCAATG 4 cut(s) 885, 1240, 1533, 1535
BseBI CCWGG 2 cut(s) 1467, 1658
BseDI CCNNGG 6 cut(s) 27, 297, 804, 1390, 1465, 1466
BseGI GGATG 5 cut(s) 37, 618, 656, 1573, 1728
BseLI CCNNNNNNNGG 7 cut(s) 225, 249, 399, 778, 1115, 1438, 1472
BseMI GCAATG 4 cut(s) 885, 1240, 1533, 1535
BseMII CTCAG 3 cut(s) 184, 536, 912
BseNI ACTGG 3 cut(s) 254, 1154, 1354
BsePI GCGCGC 1 cut(s) 890
BseRI GAGGAG 2 cut(s) 542, 886
BseXI GCAGC 6 cut(s) 90, 628, 637, 640, 1597, 1714
BsgI GTGCAG 1 cut(s) 1527
Bsh1236I CGCG 6 cut(s) 190, 345, 388, 707, 892, 1454
Bsh1285I CGRYCG 2 cut(s) 144, 772
BshFI GGCC 5 cut(s) 60, 698, 1100, 1464, 1522
BshNI GGYRCC 3 cut(s) 228, 1274, 1624
BshTI ACCGGT 1 cut(s) 574
BsiEI CGRYCG 2 cut(s) 144, 772
BsiHKCI CYCGRG 2 cut(s) 938, 1391
BsiSI CCGG 5 cut(s) 226, 472, 575, 908, 1304
BslFI GGGAC 1 cut(s) 416
BslI CCNNNNNNNGG 7 cut(s) 225, 249, 399, 778, 1115, 1438, 1472
BsmFI GGGAC 1 cut(s) 416
BsmI GAATGC 1 cut(s) 468
BsnI GGCC 5 cut(s) 60, 698, 1100, 1464, 1522
BsoBI CYCGRG 2 cut(s) 938, 1391
Bsp1407I TGTACA 1 cut(s) 1591
Bsp143I GATC 5 cut(s) 252, 517, 789, 816, 1198
BspANI GGCC 5 cut(s) 60, 698, 1100, 1464, 1522
BspCNI CTCAG 3 cut(s) 183, 535, 911
BspFNI CGCG 6 cut(s) 190, 345, 388, 707, 892, 1454
BspLI GGNNCC 4 cut(s) 230, 404, 1276, 1626
BspMI ACCTGC 2 cut(s) 1286, 1723
BspOI GCTAGC 1 cut(s) 1535
BspPI GGATC 3 cut(s) 260, 512, 784
BspQI GCTCTTC 1 cut(s) 16
BspT107I GGYRCC 3 cut(s) 228, 1274, 1624
BsrDI GCAATG 4 cut(s) 885, 1240, 1533, 1535
BsrFI RCCGGY 3 cut(s) 471, 574, 1303
BsrGI TGTACA 1 cut(s) 1591
BsrI ACTGG 3 cut(s) 254, 1154, 1354
BssAI RCCGGY 3 cut(s) 471, 574, 1303
BssECI CCNNGG 6 cut(s) 27, 297, 804, 1390, 1465, 1466
BssHII GCGCGC 1 cut(s) 890
BssMI GATC 5 cut(s) 252, 517, 789, 816, 1198
BssNI GRCGYC 2 cut(s) 229, 1275
BssT1I CCWWGG 2 cut(s) 27, 804
Bst2UI CCWGG 2 cut(s) 1467, 1658
Bst4CI ACNGT 1 cut(s) 800
Bst6I CTCTTC 3 cut(s) 16, 141, 1158
BstACI GRCGYC 2 cut(s) 229, 1275
BstAPI GCANNNNNTGC 2 cut(s) 622, 1541
BstAUI TGTACA 1 cut(s) 1591
BstBAI YACGTR 2 cut(s) 426, 962
BstC8I GCNNGC 9 cut(s) 192, 473, 892, 1363, 1437, 1462, 1524, 1533, 1542
BstDEI CTNAG 3 cut(s) 170, 522, 898
BstEII GGTNACC 1 cut(s) 302
BstF5I GGATG 5 cut(s) 37, 618, 656, 1573, 1728
BstFNI CGCG 6 cut(s) 190, 345, 388, 707, 892, 1454
BstH2I RGCGCY 3 cut(s) 207, 232, 1278
BstHHI GCGC 8 cut(s) 206, 231, 345, 390, 423, 892, 894, 1277
BstKTI GATC 5 cut(s) 255, 520, 792, 819, 1201
BstMBI GATC 5 cut(s) 252, 517, 789, 816, 1198
BstMCI CGRYCG 2 cut(s) 144, 772
BstNI CCWGG 2 cut(s) 1467, 1658
BstNSI RCATGY 4 cut(s) 183, 367, 859, 1598
BstPI GGTNACC 1 cut(s) 302
BstSCI CCNGG 4 cut(s) 224, 906, 1465, 1656
BstSFI CTRYAG 1 cut(s) 1751
BstUI CGCG 6 cut(s) 190, 345, 388, 707, 892, 1454
BstV1I GCAGC 6 cut(s) 90, 628, 637, 640, 1597, 1714
BstV2I GAAGAC 2 cut(s) 1086, 1554
BstX2I RGATCY 3 cut(s) 517, 789, 816
BstYI RGATCY 3 cut(s) 517, 789, 816
Bsu36I CCTNAGG 1 cut(s) 522
BsuRI GGCC 5 cut(s) 60, 698, 1100, 1464, 1522
BtgZI GCGATG 1 cut(s) 1469
BtsCI GGATG 5 cut(s) 37, 618, 656, 1573, 1728
BtsI GCAGTG 2 cut(s) 493, 1492
BtsIMutI CAGTG 3 cut(s) 493, 1278, 1492
BveI ACCTGC 2 cut(s) 1286, 1723
Cac8I GCNNGC 9 cut(s) 192, 473, 892, 1363, 1437, 1462, 1524, 1533, 1542
CaiI CAGNNNCTG 1 cut(s) 1675
CfoI GCGC 8 cut(s) 206, 231, 345, 390, 423, 892, 894, 1277
Cfr10I RCCGGY 3 cut(s) 471, 574, 1303
Cfr13I GGNCC 5 cut(s) 43, 94, 403, 1099, 1463
Csp6I GTAC 6 cut(s) 703, 811, 904, 1429, 1592, 1625
CspAI ACCGGT 1 cut(s) 574
CviQI GTAC 6 cut(s) 703, 811, 904, 1429, 1592, 1625
DdeI CTNAG 3 cut(s) 170, 522, 898
DinI GGCGCC 2 cut(s) 230, 1276
DpnI GATC 5 cut(s) 254, 519, 791, 818, 1200
DpnII GATC 5 cut(s) 252, 517, 789, 816, 1198
Eam1104I CTCTTC 3 cut(s) 16, 141, 1158
EarI CTCTTC 3 cut(s) 16, 141, 1158
EciI GGCGGA 1 cut(s) 107
Eco130I CCWWGG 2 cut(s) 27, 804
Eco147I AGGCCT 1 cut(s) 60
Eco32I GATATC 1 cut(s) 1446
Eco47I GGWCC 3 cut(s) 43, 94, 403
Eco47III AGCGCT 1 cut(s) 205
Eco81I CCTNAGG 1 cut(s) 522
Eco88I CYCGRG 2 cut(s) 938, 1391
Eco91I GGTNACC 1 cut(s) 302
EcoO109I RGGNCCY 1 cut(s) 1099
EcoO65I GGTNACC 1 cut(s) 302
EcoRII CCWGG 2 cut(s) 1465, 1656
EcoRV GATATC 1 cut(s) 1446
EcoT14I CCWWGG 2 cut(s) 27, 804
EcoT22I ATGCAT 1 cut(s) 433
EgeI GGCGCC 2 cut(s) 230, 1276
EheI GGCGCC 2 cut(s) 230, 1276
ErhI CCWWGG 2 cut(s) 27, 804
FaqI GGGAC 1 cut(s) 416
FauNDI CATATG 1 cut(s) 1639
FblI GTMKAC 2 cut(s) 1300, 1599
FokI GGATG 5 cut(s) 44, 625, 663, 1560, 1735
FspAI RTGCGCAY 1 cut(s) 422
FspBI CTAG 6 cut(s) 98, 440, 609, 1010, 1532, 1578
FspI TGCGCA 1 cut(s) 422
GlaI GCGC 8 cut(s) 205, 230, 344, 389, 422, 891, 893, 1276
GsuI CTGGAG 2 cut(s) 806, 1679
HaeII RGCGCY 3 cut(s) 207, 232, 1278
HaeIII GGCC 5 cut(s) 60, 698, 1100, 1464, 1522
HapII CCGG 5 cut(s) 226, 472, 575, 908, 1304
HhaI GCGC 8 cut(s) 206, 231, 345, 390, 423, 892, 894, 1277
Hin1I GRCGYC 2 cut(s) 229, 1275
Hin6I GCGC 8 cut(s) 204, 229, 343, 388, 421, 890, 892, 1275
HinP1I GCGC 8 cut(s) 204, 229, 343, 388, 421, 890, 892, 1275
HincII GTYRAC 1 cut(s) 214
HindII GTYRAC 1 cut(s) 214
HindIII AAGCTT 1 cut(s) 1314
HinfI GANTC 3 cut(s) 1049, 1375, 1583
HpaII CCGG 5 cut(s) 226, 472, 575, 908, 1304
HphI GGTGA 2 cut(s) 49, 314
Hpy166II GTNNAC 5 cut(s) 214, 811, 875, 1301, 1600
Hpy188I TCNGA 7 cut(s) 370, 461, 564, 833, 901, 1380, 1654
Hpy188III TCNNGA 5 cut(s) 265, 377, 440, 524, 727
Hpy8I GTNNAC 5 cut(s) 214, 811, 875, 1301, 1600
HpyAV CCTTC 5 cut(s) 34, 205, 1090, 1187, 1375
HpyCH4III ACNGT 1 cut(s) 800
HpyCH4IV ACGT 3 cut(s) 102, 425, 961
HpyF3I CTNAG 3 cut(s) 170, 522, 898
HpySE526I ACGT 3 cut(s) 102, 425, 961
Hsp92I GRCGYC 2 cut(s) 229, 1275
HspAI GCGC 8 cut(s) 204, 229, 343, 388, 421, 890, 892, 1275
KasI GGCGCC 2 cut(s) 228, 1274
KpnI GGTACC 1 cut(s) 1628
KroI GCCGGC 1 cut(s) 471
KroNI GCCGGC 1 cut(s) 473
Kzo9I GATC 5 cut(s) 252, 517, 789, 816, 1198
LguI GCTCTTC 1 cut(s) 16
LmnI GCTCC 4 cut(s) 395, 636, 781, 899
Lsp1109I GCAGC 6 cut(s) 90, 628, 637, 640, 1597, 1714
LweI GCATC 6 cut(s) 22, 603, 768, 837, 1210, 1713
MaeI CTAG 6 cut(s) 98, 440, 609, 1010, 1532, 1578
MaeII ACGT 3 cut(s) 102, 425, 961
MaeIII GTNAC 4 cut(s) 302, 377, 962, 1787
MalI GATC 5 cut(s) 254, 519, 791, 818, 1200
MboI GATC 5 cut(s) 252, 517, 789, 816, 1198
MflI RGATCY 3 cut(s) 517, 789, 816
MluCI AATT 7 cut(s) 14, 165, 394, 538, 839, 1170, 1250
Mly113I GGCGCC 2 cut(s) 229, 1275
MlyI GAGTC 1 cut(s) 1592
MmeI TCCRAC 3 cut(s) 307, 831, 1717
Mph1103I ATGCAT 1 cut(s) 433
MroNI GCCGGC 1 cut(s) 471
MseI TTAA 2 cut(s) 764, 1173
MslI CAYNNNNRTG 3 cut(s) 575, 1578, 1778
MspI CCGG 5 cut(s) 226, 472, 575, 908, 1304
MspR9I CCNGG 4 cut(s) 226, 908, 1467, 1658
Mva1269I GAATGC 1 cut(s) 468
MvaI CCWGG 2 cut(s) 1467, 1658
MvnI CGCG 6 cut(s) 190, 345, 388, 707, 892, 1454
NaeI GCCGGC 1 cut(s) 473
NarI GGCGCC 2 cut(s) 229, 1275
NciI CCSGG 2 cut(s) 226, 908
NdeI CATATG 1 cut(s) 1639
NdeII GATC 5 cut(s) 252, 517, 789, 816, 1198
NgoMIV GCCGGC 1 cut(s) 471
NheI GCTAGC 1 cut(s) 1531
NlaIV GGNNCC 4 cut(s) 230, 404, 1276, 1626
NmuCI GTSAC 3 cut(s) 302, 377, 962
NsbI TGCGCA 1 cut(s) 422
NsiI ATGCAT 1 cut(s) 433
NspI RCATGY 4 cut(s) 183, 367, 859, 1598
OliI CACNNNNGTG 1 cut(s) 575
PaeR7I CTCGAG 1 cut(s) 938
PasI CCCWGGG 1 cut(s) 1466
PauI GCGCGC 1 cut(s) 890
PceI AGGCCT 1 cut(s) 60
PciI ACATGT 3 cut(s) 363, 855, 1594
PciSI GCTCTTC 1 cut(s) 16
PctI GAATGC 1 cut(s) 468
PdiI GCCGGC 1 cut(s) 473
PfeI GAWTC 2 cut(s) 1049, 1375
PflMI CCANNNNNTGG 3 cut(s) 249, 399, 1472
PinAI ACCGGT 1 cut(s) 574
PleI GAGTC 1 cut(s) 1591
PluTI GGCGCC 2 cut(s) 232, 1278
PpsI GAGTC 1 cut(s) 1591
Ppu21I YACGTR 2 cut(s) 426, 962
PscI ACATGT 3 cut(s) 363, 855, 1594
Psp6I CCWGG 2 cut(s) 1465, 1656
PspEI GGTNACC 1 cut(s) 302
PspGI CCWGG 2 cut(s) 1465, 1656
PspN4I GGNNCC 4 cut(s) 230, 404, 1276, 1626
PspPI GGNCC 5 cut(s) 43, 94, 403, 1099, 1463
PspXI VCTCGAGB 1 cut(s) 938
PstNI CAGNNNCTG 1 cut(s) 1675
PsuI RGATCY 3 cut(s) 517, 789, 816
PteI GCGCGC 1 cut(s) 890
RsaI GTAC 6 cut(s) 704, 812, 905, 1430, 1593, 1626
RsaNI GTAC 6 cut(s) 703, 811, 904, 1429, 1592, 1625
RseI CAYNNNNRTG 3 cut(s) 575, 1578, 1778
SapI GCTCTTC 1 cut(s) 16
SaqAI TTAA 2 cut(s) 764, 1173
Sau3AI GATC 5 cut(s) 252, 517, 789, 816, 1198
Sau96I GGNCC 5 cut(s) 43, 94, 403, 1099, 1463
SchI GAGTC 1 cut(s) 1592
ScrFI CCNGG 4 cut(s) 226, 908, 1467, 1658
SfaNI GCATC 6 cut(s) 22, 603, 768, 837, 1210, 1713
SfcI CTRYAG 1 cut(s) 1751
SfoI GGCGCC 2 cut(s) 230, 1276
Sfr274I CTCGAG 1 cut(s) 938
SgrAI CRCCGGYG 1 cut(s) 574
SinI GGWCC 3 cut(s) 43, 94, 403
SlaI CTCGAG 1 cut(s) 938
SmiMI CAYNNNNRTG 3 cut(s) 575, 1578, 1778
SmlI CTYRAG 4 cut(s) 263, 452, 635, 938
SmoI CTYRAG 4 cut(s) 263, 452, 635, 938
Sse9I AATT 7 cut(s) 14, 165, 394, 538, 839, 1170, 1250
SseBI AGGCCT 1 cut(s) 60
SspDI GGCGCC 2 cut(s) 228, 1274
SspI AATATT 1 cut(s) 327
SspMI CTAG 6 cut(s) 98, 440, 609, 1010, 1532, 1578
StuI AGGCCT 1 cut(s) 60
StyD4I CCNGG 4 cut(s) 224, 906, 1465, 1656
StyI CCWWGG 2 cut(s) 27, 804
TaaI ACNGT 1 cut(s) 800
TaiI ACGT 3 cut(s) 105, 428, 964
TaqI TCGA 4 cut(s) 768, 939, 1229, 1373
TaqII GACCGA 2 cut(s) 158, 311
TasI AATT 7 cut(s) 14, 165, 394, 538, 839, 1170, 1250
TatI WGTACW 1 cut(s) 1591
TauI GCSGC 5 cut(s) 348, 828, 1065, 1454, 1633
TfiI GAWTC 2 cut(s) 1049, 1375
Tru1I TTAA 2 cut(s) 764, 1173
Tru9I TTAA 2 cut(s) 764, 1173
TscAI CASTG 3 cut(s) 493, 1285, 1492
TseFI GTSAC 3 cut(s) 302, 377, 962
TseI GCWGC 6 cut(s) 78, 616, 625, 628, 1610, 1702
Tsp45I GTSAC 3 cut(s) 302, 377, 962
TspGWI ACGGA 1 cut(s) 1437
TspRI CASTG 3 cut(s) 493, 1285, 1492
Van91I CCANNNNNTGG 3 cut(s) 249, 399, 1472
VpaK11BI GGWCC 3 cut(s) 43, 94, 403
XapI RAATTY 2 cut(s) 14, 165
XbaI TCTAGA 1 cut(s) 439
XceI RCATGY 4 cut(s) 183, 367, 859, 1598
XhoI CTCGAG 1 cut(s) 938
XmiI GTMKAC 2 cut(s) 1300, 1599
XspI CTAG 6 cut(s) 98, 440, 609, 1010, 1532, 1578
Zsp2I ATGCAT 1 cut(s) 433
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.