FvH4_5g33420

Protein of unknown function (DUF1005)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0013323
Physical Location & Seq
Reverse (-)
24161858 .. 24164266
2409 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g33420.t1

Sequence Viewer

Length: 1362 bp
ATGGATCCCTGCCCATTTGTGCGAGTCACAGTGGGCAATCTCGCTCTCAAAATCCCCGTCGCTTCGAAACCGGCCCGCACCGTCGTCCACCCTTCCTCCTCGCCGTGTTTCTGCAAGATCAAGCTCAACAACCTCCCGGTCCAAACCGCCGTCGTTCCTTGCCTCCCGCCGGAAACCCAAACCCTAGACGCTAATACCGGCCTCGGAGTCACTGCCGCCACCTTCCATCTCAGCAAGTCGGATCTGGACCGGGTCGCGTCTAAGTCCATCTTCTCCGGGAAACTCTGCCTCAAAATCGCAATCTACACGGGGCGGAGGGGCACCACCTGTGGGGTTAACTCCGGGCGGCTTTTGGGCCGGGTTTCGGTCCCTTTGGGTCTGGCGGGAACCCAGGCTAAGGCTAGTGTGTTCCACAACGGATGGGTCTCCGTCGGCAAAGGCGTTAAGGGCGCCGGTGCTCAGATTACTCAGTTTCATTTGAATGTTAAGGCCGAACCCGACCCTAGATTCGTGTTTCAGTTCGACGGCGAGCCTGAGTGTAGTCCTCAAGTGTTTCAGATCCAAGGTAATATCAGACAGCCCGTCTTCACCTGCAAATTCAGCTTCCGAAACACCGGCGATCGAACCCAGAGATCCAGGTCATCGCATTCAGACCAGAGTGGCTCCAGAAGCTGGCTGAGCTCGTTCGGAAGCGAGCGAGAGCGACCCGGCAGGGAACGCAAAGGCTGGTCCATAACGGTCCATGACCTATCCGGGTCGCCGGTAGCCGCCGCATCAATGGTCACACCCTTTGTGGCCTCACCGGGTTCCGACCGGGTCAGCCGCTCCAACCCCGGATGCTGGCTCATCCTCAGACCCGGAGACGGCACCTGGCAGCCCTGGGGCCGCCTCGAGGCATGGAGGGAGCGCGGCGGGGCCGACGGACTCGGGTACCGTTTCGAACTCATACCCGACACCAACGGCGGCATGAGCGCCGGCGGCATTGTTCTGGCGGAGTCGACTCTGAGCTTAAACAAAGGCGGGAAATTCGTTCTTGACCTCGGGTCGAATTCCGGGTCGGGTAATAAAGCTCCGGTCGTTCCGAACTCGCCGGCTTGCAGCCCGAAGAGCAGTGGGGACTTCGGGTACGGGTTGTGGCCGTATTGCTTGTACAGAGGGTTTGTGATGTCGGCGCGTGTGGAGGGTGAGAGAAGGTGCAGCAAGCCTACGGTGGAGGTGAGCGTGCAGCACGTGACCTGCACGGAGGACGCAGCGGCGTACGTGGCCTTAGCGGCGGCCGTTGATCTCTGCATGGACGCTTGCCGGCTGTTCTCGCAGCGGCTGAGGAAAGAGCTCTGCCAGCCGTCTGATTTGCTAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1005

Protein Analysis

454

Amino Acids

48.45

Weight (kDa)

9.36

Isoelectric Point (pI)

41.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1005 PF06219 1 - 446 3.7e-207 Protein of unknown function (DUF1005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10020
fragaria_vesca FvH4_5g33420
malus_domestica MD08G1211700.v1.1 MD15G1395200.v1.1
prunus_persica Prupe.1G544000_v2.0.a1
pyrus_communis pycom08g18240 pycom15g35570
rosa_chinensis RchiOBHm_Chr7g0232151
rosa_laevigata RLG00000001387
rosa_multiflora Rmu_sc0000616.1_g000015 Rmu_sc0004780.1_g000008
rosa_roxburghii Rroxscaffold_3G00228740
rosa_rugosa Rorug07G0269800
rosa_samantha Rh7AG424400 Rh7BG398500 Rh7CG444700 Rh7DG416400
rosa_wichuraiana Rw7G035090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 599
AbsI CCTCGAGG 1 cut(s) 890
Acc36I ACCTGC 2 cut(s) 599, 1244
Acc65I GGTACC 1 cut(s) 930
AccB1I GGYRCC 4 cut(s) 320, 449, 866, 930
AccB7I CCANNNNNTGG 1 cut(s) 672
AccBSI CCGCTC 1 cut(s) 825
AccI GTMKAC 1 cut(s) 998
AccII CGCG 3 cut(s) 257, 909, 1174
AclWI GGATC 4 cut(s) 12, 249, 553, 627
AcoI YGGCCR 2 cut(s) 1136, 1275
AcsI RAATTY 3 cut(s) 596, 1025, 1048
AcvI CACGTG 1 cut(s) 1231
AcyI GRCGYC 1 cut(s) 450
AfaI GTAC 4 cut(s) 932, 1127, 1151, 1259
AfiI CCNNNNNNNGG 8 cut(s) 169, 330, 364, 397, 672, 840, 863, 892
AgsI TTSAA 1 cut(s) 481
AhdI GACNNNNNGTC 2 cut(s) 581, 1042
AjnI CCWGG 4 cut(s) 390, 635, 869, 878
AluBI AGCT 7 cut(s) 124, 603, 672, 681, 1008, 1070, 1333
AluI AGCT 7 cut(s) 124, 603, 672, 681, 1008, 1070, 1333
Alw21I GWGCWC 3 cut(s) 460, 683, 1335
Alw26I GTCTC 2 cut(s) 430, 855
AlwI GGATC 4 cut(s) 12, 249, 553, 627
AlwNI CAGNNNCTG 2 cut(s) 672, 1321
Ama87I CYCGRG 3 cut(s) 890, 926, 1040
ApeKI GCWGC 6 cut(s) 874, 1098, 1197, 1225, 1250, 1315
ApoI RAATTY 3 cut(s) 596, 1025, 1048
ArsI GACNNNNNNTTYG 6 cut(s) 42, 74, 491, 523, 1040, 1072
Asp718I GGTACC 1 cut(s) 930
AspLEI GCGC 4 cut(s) 452, 909, 974, 1174
AspS9I GGNCC 9 cut(s) 73, 139, 247, 355, 367, 729, 739, 883, 915
AsuHPI GGTGA 4 cut(s) 580, 792, 1196, 1228
AsuII TTCGAA 2 cut(s) 65, 939
AvaI CYCGRG 3 cut(s) 890, 926, 1040
AvaII GGWCC 5 cut(s) 139, 247, 367, 729, 739
BaeGI GKGCMC 1 cut(s) 323
BaeI ACNNNNGTAYC 2 cut(s) 914, 947
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 4 cut(s) 320, 449, 866, 930
BanII GRGCYC 2 cut(s) 683, 1335
BbrPI CACGTG 1 cut(s) 1231
BbsI GAAGAC 1 cut(s) 577
Bbv12I GWGCWC 3 cut(s) 460, 683, 1335
BbvCI CCTCAGC 1 cut(s) 1322
BbvI GCAGC 6 cut(s) 886, 1110, 1209, 1237, 1262, 1327
BccI CCATC 3 cut(s) 234, 275, 414
BceAI ACGGC 8 cut(s) 88, 134, 541, 880, 976, 1123, 1262, 1327
BciT130I CCWGG 4 cut(s) 392, 637, 871, 880
BcoDI GTCTC 2 cut(s) 430, 855
BfaI CTAG 4 cut(s) 185, 402, 504, 1355
BfoI RGCGCY 2 cut(s) 453, 975
BfuAI ACCTGC 2 cut(s) 599, 1244
BglI GCCNNNNNGGC 1 cut(s) 1271
BlpI GCTNAGC 1 cut(s) 677
Bme18I GGWCC 5 cut(s) 139, 247, 367, 729, 739
BmeRI GACNNNNNGTC 2 cut(s) 581, 1042
BmeT110I CYCGRG 3 cut(s) 890, 926, 1040
BmgT120I GGNCC 9 cut(s) 73, 139, 247, 355, 367, 729, 739, 883, 915
BmsI GCATC 2 cut(s) 782, 827
BpiI GAAGAC 1 cut(s) 577
BpmI CTGGAG 1 cut(s) 649
Bpu10I CCTNAGC 3 cut(s) 396, 1267, 1322
Bpu1102I GCTNAGC 1 cut(s) 677
Bpu14I TTCGAA 2 cut(s) 65, 939
BpuEI CTTGAG 1 cut(s) 531
BsaAI YACGTR 2 cut(s) 1231, 1261
BsaHI GRCGYC 1 cut(s) 450
BsaI GGTCTC 1 cut(s) 430
BsaJI CCNNGG 7 cut(s) 202, 390, 562, 832, 878, 879, 1039
BsaWI WCCGGW 1 cut(s) 1072
BsaXI ACNNNNNCTCC 2 cut(s) 80, 110
Bsc4I CCNNNNNNNGG 8 cut(s) 169, 330, 364, 397, 672, 840, 863, 892
Bse118I RCCGGY 8 cut(s) 70, 197, 452, 614, 760, 974, 1090, 1302
BseBI CCWGG 4 cut(s) 392, 637, 871, 880
BseDI CCNNGG 7 cut(s) 202, 390, 562, 832, 878, 879, 1039
BseGI GGATG 3 cut(s) 425, 842, 846
BseLI CCNNNNNNNGG 8 cut(s) 169, 330, 364, 397, 672, 840, 863, 892
BseMII CTCAG 8 cut(s) 244, 473, 482, 525, 668, 865, 995, 1313
BseRI GAGGAG 1 cut(s) 88
BseSI GKGCMC 1 cut(s) 323
BseX3I CGGCCG 1 cut(s) 1275
BseXI GCAGC 6 cut(s) 886, 1110, 1209, 1237, 1262, 1327
BsgI GTGCAG 3 cut(s) 1216, 1222, 1244
Bsh1236I CGCG 3 cut(s) 257, 909, 1174
Bsh1285I CGRYCG 4 cut(s) 622, 814, 1077, 1278
BshNI GGYRCC 4 cut(s) 320, 449, 866, 930
BsiEI CGRYCG 4 cut(s) 622, 814, 1077, 1278
BsiHKAI GWGCWC 3 cut(s) 460, 683, 1335
BsiHKCI CYCGRG 3 cut(s) 890, 926, 1040
BsiWI CGTACG 1 cut(s) 1257
BslFI GGGAC 2 cut(s) 353, 1130
BslI CCNNNNNNNGG 8 cut(s) 169, 330, 364, 397, 672, 840, 863, 892
BsmAI GTCTC 2 cut(s) 430, 855
BsmBI CGTCTC 1 cut(s) 855
BsmFI GGGAC 2 cut(s) 353, 1130
BsmI GAATGC 1 cut(s) 646
Bso31I GGTCTC 1 cut(s) 430
BsoBI CYCGRG 3 cut(s) 890, 926, 1040
Bsp119I TTCGAA 2 cut(s) 65, 939
Bsp1286I GDGCHC 4 cut(s) 323, 460, 683, 1335
Bsp1407I TGTACA 1 cut(s) 1149
Bsp143I GATC 7 cut(s) 4, 117, 241, 558, 619, 632, 1282
Bsp1720I GCTNAGC 1 cut(s) 677
BspCNI CTCAG 8 cut(s) 243, 472, 481, 526, 669, 864, 996, 1314
BspFNI CGCG 3 cut(s) 257, 909, 1174
BspMI ACCTGC 2 cut(s) 599, 1244
BspPI GGATC 4 cut(s) 12, 249, 553, 627
BspQI GCTCTTC 1 cut(s) 1100
BspT104I TTCGAA 2 cut(s) 65, 939
BspT107I GGYRCC 4 cut(s) 320, 449, 866, 930
BspTNI GGTCTC 1 cut(s) 430
BsrBI CCGCTC 1 cut(s) 825
BsrFI RCCGGY 8 cut(s) 70, 197, 452, 614, 760, 974, 1090, 1302
BsrGI TGTACA 1 cut(s) 1149
BssAI RCCGGY 8 cut(s) 70, 197, 452, 614, 760, 974, 1090, 1302
BssECI CCNNGG 7 cut(s) 202, 390, 562, 832, 878, 879, 1039
BssMI GATC 7 cut(s) 4, 117, 241, 558, 619, 632, 1282
BssNI GRCGYC 1 cut(s) 450
BssT1I CCWWGG 1 cut(s) 562
Bst2UI CCWGG 4 cut(s) 392, 637, 871, 880
Bst4CI ACNGT 5 cut(s) 31, 82, 739, 935, 1210
Bst6I CTCTTC 1 cut(s) 1100
BstACI GRCGYC 1 cut(s) 450
BstAUI TGTACA 1 cut(s) 1149
BstBAI YACGTR 2 cut(s) 1231, 1261
BstBI TTCGAA 2 cut(s) 65, 939
BstF5I GGATG 3 cut(s) 425, 842, 846
BstFNI CGCG 3 cut(s) 257, 909, 1174
BstH2I RGCGCY 2 cut(s) 453, 975
BstHHI GCGC 4 cut(s) 452, 909, 974, 1174
BstKTI GATC 7 cut(s) 7, 120, 244, 561, 622, 635, 1285
BstMAI GTCTC 2 cut(s) 430, 855
BstMBI GATC 7 cut(s) 4, 117, 241, 558, 619, 632, 1282
BstMCI CGRYCG 4 cut(s) 622, 814, 1077, 1278
BstNI CCWGG 4 cut(s) 392, 637, 871, 880
BstSLI GKGCMC 1 cut(s) 323
BstUI CGCG 3 cut(s) 257, 909, 1174
BstV1I GCAGC 6 cut(s) 886, 1110, 1209, 1237, 1262, 1327
BstV2I GAAGAC 1 cut(s) 577
BstX2I RGATCY 4 cut(s) 4, 241, 558, 632
BstYI RGATCY 4 cut(s) 4, 241, 558, 632
BstZI CGGCCG 1 cut(s) 1275
BtgZI GCGATG 1 cut(s) 627
BtsCI GGATG 3 cut(s) 425, 842, 846
BtsI GCAGTG 2 cut(s) 210, 1117
BtsIMutI CAGTG 3 cut(s) 36, 210, 1117
BveI ACCTGC 2 cut(s) 599, 1244
CaiI CAGNNNCTG 2 cut(s) 672, 1321
CfoI GCGC 4 cut(s) 452, 909, 974, 1174
Cfr10I RCCGGY 8 cut(s) 70, 197, 452, 614, 760, 974, 1090, 1302
Cfr13I GGNCC 9 cut(s) 73, 139, 247, 355, 367, 729, 739, 883, 915
CseI GACGC 4 cut(s) 197, 246, 1256, 1304
Csp6I GTAC 4 cut(s) 931, 1126, 1150, 1258
CviAII CATG 4 cut(s) 743, 897, 967, 1291
CviQI GTAC 4 cut(s) 931, 1126, 1150, 1258
DinI GGCGCC 1 cut(s) 451
DpnI GATC 7 cut(s) 6, 119, 243, 560, 621, 634, 1284
DpnII GATC 7 cut(s) 4, 117, 241, 558, 619, 632, 1282
DriI GACNNNNNGTC 2 cut(s) 581, 1042
EaeI YGGCCR 2 cut(s) 1136, 1275
EagI CGGCCG 1 cut(s) 1275
Eam1104I CTCTTC 1 cut(s) 1100
Eam1105I GACNNNNNGTC 2 cut(s) 581, 1042
EarI CTCTTC 1 cut(s) 1100
EciI GGCGGA 2 cut(s) 328, 1007
Ecl136II GAGCTC 2 cut(s) 681, 1333
EclXI CGGCCG 1 cut(s) 1275
Eco130I CCWWGG 1 cut(s) 562
Eco24I GRGCYC 2 cut(s) 683, 1335
Eco31I GGTCTC 1 cut(s) 430
Eco47I GGWCC 5 cut(s) 139, 247, 367, 729, 739
Eco52I CGGCCG 1 cut(s) 1275
Eco53kI GAGCTC 2 cut(s) 681, 1333
Eco72I CACGTG 1 cut(s) 1231
Eco88I CYCGRG 3 cut(s) 890, 926, 1040
EcoICRI GAGCTC 2 cut(s) 681, 1333
EcoRI GAATTC 1 cut(s) 1048
EcoRII CCWGG 4 cut(s) 390, 635, 869, 878
EcoT14I CCWWGG 1 cut(s) 562
EcoT38I GRGCYC 2 cut(s) 683, 1335
EgeI GGCGCC 1 cut(s) 451
EheI GGCGCC 1 cut(s) 451
ErhI CCWWGG 1 cut(s) 562
Esp3I CGTCTC 1 cut(s) 855
FaeI CATG 4 cut(s) 746, 900, 970, 1294
FaiI YATR 6 cut(s) 734, 744, 898, 947, 968, 1292
FalI AAGNNNNNCTT 2 cut(s) 254, 286
FaqI GGGAC 2 cut(s) 353, 1130
FatI CATG 4 cut(s) 742, 896, 966, 1290
FauI CCCGC 5 cut(s) 83, 174, 376, 905, 1013
FblI GTMKAC 1 cut(s) 998
FokI GGATG 3 cut(s) 432, 833, 849
FriOI GRGCYC 2 cut(s) 683, 1335
FspBI CTAG 4 cut(s) 185, 402, 504, 1355
GlaI GCGC 4 cut(s) 451, 908, 973, 1173
GsuI CTGGAG 1 cut(s) 649
HaeII RGCGCY 2 cut(s) 453, 975
HgaI GACGC 4 cut(s) 197, 246, 1256, 1304
HhaI GCGC 4 cut(s) 452, 909, 974, 1174
Hin1I GRCGYC 1 cut(s) 450
Hin1II CATG 4 cut(s) 746, 900, 970, 1294
Hin6I GCGC 4 cut(s) 450, 907, 972, 1172
HinP1I GCGC 4 cut(s) 450, 907, 972, 1172
HincII GTYRAC 2 cut(s) 337, 999
HindII GTYRAC 2 cut(s) 337, 999
HinfI GANTC 6 cut(s) 24, 207, 507, 924, 995, 1000
HpaI GTTAAC 1 cut(s) 337
HphI GGTGA 4 cut(s) 580, 792, 1196, 1228
Hpy166II GTNNAC 3 cut(s) 88, 337, 999
Hpy188III TCNNGA 3 cut(s) 245, 666, 1034
Hpy8I GTNNAC 3 cut(s) 88, 337, 999
Hpy99I CGWCG 6 cut(s) 62, 86, 155, 434, 527, 923
HpyAV CCTTC 3 cut(s) 102, 232, 1185
HpyCH4III ACNGT 5 cut(s) 31, 82, 739, 935, 1210
HpyCH4IV ACGT 2 cut(s) 1230, 1260
HpyCH4V TGCA 7 cut(s) 114, 594, 1098, 1197, 1225, 1239, 1290
HpySE526I ACGT 2 cut(s) 1230, 1260
Hsp92I GRCGYC 1 cut(s) 450
Hsp92II CATG 4 cut(s) 746, 900, 970, 1294
HspAI GCGC 4 cut(s) 450, 907, 972, 1172
KasI GGCGCC 1 cut(s) 449
KpnI GGTACC 1 cut(s) 934
KroI GCCGGC 3 cut(s) 974, 1090, 1302
KroNI GCCGGC 3 cut(s) 976, 1092, 1304
KspAI GTTAAC 1 cut(s) 337
Kzo9I GATC 7 cut(s) 4, 117, 241, 558, 619, 632, 1282
LguI GCTCTTC 1 cut(s) 1100
LmnI GCTCC 4 cut(s) 668, 830, 904, 1075
Lsp1109I GCAGC 6 cut(s) 886, 1110, 1209, 1237, 1262, 1327
LweI GCATC 2 cut(s) 782, 827
MaeI CTAG 4 cut(s) 185, 402, 504, 1355
MaeII ACGT 2 cut(s) 1230, 1260
MaeIII GTNAC 4 cut(s) 25, 208, 781, 1231
MalI GATC 7 cut(s) 6, 119, 243, 560, 621, 634, 1284
MbiI CCGCTC 1 cut(s) 825
MboI GATC 7 cut(s) 4, 117, 241, 558, 619, 632, 1282
MboII GAAGA 3 cut(s) 262, 577, 1117
MflI RGATCY 4 cut(s) 4, 241, 558, 632
MhlI GDGCHC 4 cut(s) 323, 460, 683, 1335
MluCI AATT 3 cut(s) 596, 1025, 1048
Mly113I GGCGCC 1 cut(s) 450
MlyI GAGTC 5 cut(s) 33, 216, 918, 994, 1004
MmeI TCCRAC 3 cut(s) 219, 834, 852
MreI CGCCGGCG 1 cut(s) 974
MroNI GCCGGC 3 cut(s) 974, 1090, 1302
MseI TTAA 4 cut(s) 336, 444, 486, 1010
MslI CAYNNNNRTG 1 cut(s) 480
MspA1I CMGCKG 2 cut(s) 1253, 1318
Mva1269I GAATGC 1 cut(s) 646
MvaI CCWGG 4 cut(s) 392, 637, 871, 880
MvnI CGCG 3 cut(s) 257, 909, 1174
NaeI GCCGGC 3 cut(s) 976, 1092, 1304
NarI GGCGCC 1 cut(s) 450
NdeII GATC 7 cut(s) 4, 117, 241, 558, 619, 632, 1282
NgoMIV GCCGGC 3 cut(s) 974, 1090, 1302
NlaIII CATG 4 cut(s) 746, 900, 970, 1294
NmuCI GTSAC 4 cut(s) 25, 208, 781, 1231
NspV TTCGAA 2 cut(s) 65, 939
PaeR7I CTCGAG 1 cut(s) 890
PaqCI CACCTGC 1 cut(s) 599
PasI CCCWGGG 1 cut(s) 879
PciSI GCTCTTC 1 cut(s) 1100
PcsI WCGNNNNNNNCGW 1 cut(s) 438
PctI GAATGC 1 cut(s) 646
PdiI GCCGGC 3 cut(s) 976, 1092, 1304
PfeI GAWTC 1 cut(s) 507
Pfl23II CGTACG 1 cut(s) 1257
PflFI GACNNNGTC 2 cut(s) 251, 815
PflMI CCANNNNNTGG 1 cut(s) 672
PfoI TCCNGGA 1 cut(s) 275
Ple19I CGATCG 1 cut(s) 622
PleI GAGTC 5 cut(s) 32, 215, 918, 994, 1003
PluTI GGCGCC 1 cut(s) 453
PmaCI CACGTG 1 cut(s) 1231
PmlI CACGTG 1 cut(s) 1231
PpsI GAGTC 5 cut(s) 32, 215, 918, 994, 1003
Ppu21I YACGTR 2 cut(s) 1231, 1261
Psp124BI GAGCTC 2 cut(s) 683, 1335
Psp6I CCWGG 4 cut(s) 390, 635, 869, 878
PspCI CACGTG 1 cut(s) 1231
PspGI CCWGG 4 cut(s) 390, 635, 869, 878
PspLI CGTACG 1 cut(s) 1257
PspPI GGNCC 9 cut(s) 73, 139, 247, 355, 367, 729, 739, 883, 915
PspXI VCTCGAGB 1 cut(s) 890
PstNI CAGNNNCTG 2 cut(s) 672, 1321
PsuI RGATCY 4 cut(s) 4, 241, 558, 632
PsyI GACNNNGTC 2 cut(s) 251, 815
PvuI CGATCG 1 cut(s) 622
RsaI GTAC 4 cut(s) 932, 1127, 1151, 1259
RsaNI GTAC 4 cut(s) 931, 1126, 1150, 1258
RseI CAYNNNNRTG 1 cut(s) 480
SacI GAGCTC 2 cut(s) 683, 1335
SalI GTCGAC 1 cut(s) 997
SapI GCTCTTC 1 cut(s) 1100
SaqAI TTAA 4 cut(s) 336, 444, 486, 1010
Sau3AI GATC 7 cut(s) 4, 117, 241, 558, 619, 632, 1282
Sau96I GGNCC 9 cut(s) 73, 139, 247, 355, 367, 729, 739, 883, 915
SchI GAGTC 5 cut(s) 33, 216, 918, 994, 1004
SduI GDGCHC 4 cut(s) 323, 460, 683, 1335
SfaNI GCATC 2 cut(s) 782, 827
SfoI GGCGCC 1 cut(s) 451
Sfr274I CTCGAG 1 cut(s) 890
SfuI TTCGAA 2 cut(s) 65, 939
SgrAI CRCCGGYG 3 cut(s) 452, 614, 974
SinI GGWCC 5 cut(s) 139, 247, 367, 729, 739
SlaI CTCGAG 1 cut(s) 890
SmiMI CAYNNNNRTG 1 cut(s) 480
SmlI CTYRAG 2 cut(s) 546, 890
SmoI CTYRAG 2 cut(s) 546, 890
Sse9I AATT 3 cut(s) 596, 1025, 1048
SspDI GGCGCC 1 cut(s) 449
SspMI CTAG 4 cut(s) 185, 402, 504, 1355
SstI GAGCTC 2 cut(s) 683, 1335
StyI CCWWGG 1 cut(s) 562
TaaI ACNGT 5 cut(s) 31, 82, 739, 935, 1210
TaiI ACGT 2 cut(s) 1233, 1263
TaqI TCGA 7 cut(s) 65, 522, 622, 891, 939, 998, 1046
TaqII GACCGA 1 cut(s) 355
TasI AATT 3 cut(s) 596, 1025, 1048
TatI WGTACW 1 cut(s) 1149
TfiI GAWTC 1 cut(s) 507
Tru1I TTAA 4 cut(s) 336, 444, 486, 1010
Tru9I TTAA 4 cut(s) 336, 444, 486, 1010
TscAI CASTG 3 cut(s) 36, 217, 1117
TseFI GTSAC 4 cut(s) 25, 208, 781, 1231
TseI GCWGC 6 cut(s) 874, 1098, 1197, 1225, 1250, 1315
Tsp45I GTSAC 4 cut(s) 25, 208, 781, 1231
TspDTI ATGAA 1 cut(s) 464
TspGWI ACGGA 4 cut(s) 418, 432, 936, 1256
TspRI CASTG 3 cut(s) 36, 217, 1117
Tth111I GACNNNGTC 2 cut(s) 251, 815
Van91I CCANNNNNTGG 1 cut(s) 672
VpaK11BI GGWCC 5 cut(s) 139, 247, 367, 729, 739
XapI RAATTY 3 cut(s) 596, 1025, 1048
XhoI CTCGAG 1 cut(s) 890
XmiI GTMKAC 1 cut(s) 998
XspI CTAG 4 cut(s) 185, 402, 504, 1355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.