RchiOBHm_Chr7g0232151

Protein of unknown function (DUF1005)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0013323
Physical Location & Seq
Reverse (-)
56080662 .. 56082935
2274 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20807

Sequence Viewer

Length: 1368 bp
ATGGATCCCTGCCCATTTGTCCGAGTCACAGTCGGCAATCTGGCCCTCAAAATTCCGGTGGCTTCGAAGCCGGCGCGCACCGTCGTCCACCCTTCGTCTTCGCCGTGTTTCTGCAAGGTCAAGCTGAACAACCTCCCGGTCCAGACGGCCGTCGTGCCGTGTCTCCCACCGGAAACCCAAACCCTAGACGCGAATAGCCACGGCGTAATAGCCGCTACCTTCCACCTCAGCAAGTCGGATCTGGACCGGGTCGCGTCCAAGTCCATCTTCGCCGCGAAACTCTGCCTCAAAATCTCAATCTACACGGGGCGAAGGGGCACCACCTGTGGAGTGAACTCCGGGAGGCTATTGGGCCGGGTTTCGGTCCCCTTGGATCTGGCGGGAACCGAGTCCAAGCCCAGTGTGTTCCACAACGGGTGGGTTTCCGTCGGCAAAGGGGCCGGGAAAGGCGCGGGTGCTGGGATTACCCAGTTTCATTTGAATGTCAAGGCGGAACCCGACCCGAGATTCGTGTTTCAGTTCGACGGCGAGCCGGAGTGCAGTCCTCAAGTGTTTCAGATCCGAGGCAATATCAGACAGCCCGTCTTCACCTGCAAGTTCAGCTTCAGAAACACCGGAGATCGAACCCAGAGATCCAGGTCCTTGCAATCGGACCAGAGTAGCTCCAGAAGCTGGCTGAGCTCGTTCGGGAGCGAGCGAGAGCGACCCGGGAGGGAACGCAAAGGCTGGTCCATAACGGTCCACGACCTATCCGGGTCGCCGGTAGCCGCCGCATCAATGGTCACACCCTTCGTGGCCTCACCGGGTTCCGACCGGGTCAGCCGCTCCAACCCCGGATCCTGGCTCATCCTCCGACCCGGGGATGGAACGTGGCAGCCATGGGGCCGCCTCGAGGCCTGGAGAGAGCGCGGCGGGGCCGACGGACTCGGGTACCGGTTCGAACTCATACCCGACTCCAACGGCGGCATGAGCGCCGGCGGCATTGTTCTGGCCGAGTCGACTCTGAGTTTAAACAAAGGCGGGAAGTTCGTTCTGGACCTCGGGTCGAATTCCGGGTCGGGTAACCGCGGCGGGGCTCCGGTTGTTCCGAACTCGCCGGCATGCAGCCCGAAGAGCAGTGGGGACTTCGGGTACGGGTTGTGGCCGTATTGCTTGTACAGAGGGTTTGTGATGTCGGCGCGCGTGGAGGGTGAGGGCAGGTGCAGCAAGCCTACGGTGGAGGTGAGCGTTCAGCACGTGAGCTGCACGGAGGACGCAGCGGCGTACGTGGCCTTAGCGGCGGCCGTTGATCTCTGCATGGACGCTTGCCGGCTCTTCTCGCAGCGGCTGAGGAAAGAGCTCTGCCAGCCGTCGGATTTGCTCGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1005

Protein Analysis

455

Amino Acids

48.55

Weight (kDa)

9.29

Isoelectric Point (pI)

43.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1005 PF06219 1 - 448 6.2e-209 Protein of unknown function (DUF1005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10020
fragaria_vesca FvH4_5g33420
malus_domestica MD08G1211700.v1.1 MD15G1395200.v1.1
prunus_persica Prupe.1G544000_v2.0.a1
pyrus_communis pycom08g18240 pycom15g35570
rosa_chinensis RchiOBHm_Chr7g0232151
rosa_laevigata RLG00000001387
rosa_multiflora Rmu_sc0000616.1_g000015 Rmu_sc0004780.1_g000008
rosa_roxburghii Rroxscaffold_3G00228740
rosa_rugosa Rorug07G0269800
rosa_samantha Rh7AG424400 Rh7BG398500 Rh7CG444700 Rh7DG416400
rosa_wichuraiana Rw7G035090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 599, 1188
AbsI CCTCGAGG 1 cut(s) 890
Acc36I ACCTGC 2 cut(s) 599, 1188
Acc65I GGTACC 1 cut(s) 930
AccB1I GGYRCC 2 cut(s) 317, 930
AccB7I CCANNNNNTGG 1 cut(s) 672
AccBSI CCGCTC 1 cut(s) 825
AccI GTMKAC 1 cut(s) 998
AccII CGCG 9 cut(s) 76, 191, 254, 275, 452, 909, 1068, 1180, 1182
AclWI GGATC 7 cut(s) 12, 246, 381, 553, 627, 831, 844
AcoI YGGCCR 4 cut(s) 147, 990, 1142, 1281
AcsI RAATTY 2 cut(s) 51, 1048
AcuI CTGAAG 1 cut(s) 589
AcvI CACGTG 1 cut(s) 1237
AfaI GTAC 4 cut(s) 932, 1133, 1157, 1265
AfiI CCNNNNNNNGG 8 cut(s) 361, 672, 840, 859, 863, 892, 1072, 1351
AgeI ACCGGT 1 cut(s) 933
AgsI TTSAA 1 cut(s) 481
AhdI GACNNNNNGTC 2 cut(s) 581, 1042
AjnI CCWGG 3 cut(s) 635, 839, 896
AjuI GAANNNNNNNTTGG 2 cut(s) 251, 283
AluBI AGCT 7 cut(s) 124, 603, 663, 672, 681, 1242, 1339
AluI AGCT 7 cut(s) 124, 603, 663, 672, 681, 1242, 1339
Alw21I GWGCWC 2 cut(s) 683, 1341
Alw26I GTCTC 1 cut(s) 167
AlwI GGATC 7 cut(s) 12, 246, 381, 553, 627, 831, 844
AlwNI CAGNNNCTG 2 cut(s) 672, 1327
Ama87I CYCGRG 6 cut(s) 502, 707, 857, 890, 926, 1040
ApeKI GCWGC 6 cut(s) 874, 1104, 1203, 1242, 1256, 1321
ApoI RAATTY 2 cut(s) 51, 1048
ArsI GACNNNNNNTTYG 4 cut(s) 491, 523, 1040, 1072
AsiGI ACCGGT 1 cut(s) 933
Asp718I GGTACC 1 cut(s) 930
AspLEI GCGC 7 cut(s) 76, 78, 452, 909, 974, 1180, 1182
AsuHPI GGTGA 4 cut(s) 580, 792, 1202, 1234
AsuII TTCGAA 2 cut(s) 65, 939
AvaI CYCGRG 6 cut(s) 502, 707, 857, 890, 926, 1040
AvaII GGWCC 8 cut(s) 139, 244, 364, 639, 652, 729, 739, 1036
BaeGI GKGCMC 1 cut(s) 320
BaeI ACNNNNGTAYC 2 cut(s) 914, 947
BamHI GGATCC 2 cut(s) 4, 836
BanI GGYRCC 2 cut(s) 317, 930
BanII GRGCYC 3 cut(s) 683, 1078, 1341
BbrPI CACGTG 1 cut(s) 1237
BbsI GAAGAC 2 cut(s) 90, 577
Bbv12I GWGCWC 2 cut(s) 683, 1341
BbvCI CCTCAGC 2 cut(s) 227, 1328
BbvI GCAGC 6 cut(s) 886, 1116, 1215, 1229, 1268, 1333
BccI CCATC 2 cut(s) 272, 857
BciT130I CCWGG 3 cut(s) 637, 841, 898
BcoDI GTCTC 1 cut(s) 167
BfaI CTAG 1 cut(s) 185
BfoI RGCGCY 1 cut(s) 975
BfuAI ACCTGC 2 cut(s) 599, 1188
BglI GCCNNNNNGGC 1 cut(s) 1277
BlpI GCTNAGC 1 cut(s) 677
Bme18I GGWCC 8 cut(s) 139, 244, 364, 639, 652, 729, 739, 1036
BmeRI GACNNNNNGTC 2 cut(s) 581, 1042
BmeT110I CYCGRG 6 cut(s) 502, 707, 857, 890, 926, 1040
BmrI ACTGGG 2 cut(s) 393, 463
BmsI GCATC 1 cut(s) 782
BmuI ACTGGG 2 cut(s) 393, 463
BoxI GACNNNNGTC 1 cut(s) 149
BpiI GAAGAC 2 cut(s) 90, 577
BpmI CTGGAG 2 cut(s) 649, 919
Bpu10I CCTNAGC 3 cut(s) 227, 1273, 1328
Bpu1102I GCTNAGC 1 cut(s) 677
Bpu14I TTCGAA 2 cut(s) 65, 939
BpuEI CTTGAG 1 cut(s) 531
BsaAI YACGTR 2 cut(s) 1237, 1267
BsaWI WCCGGW 5 cut(s) 55, 169, 614, 933, 1078
Bsc4I CCNNNNNNNGG 8 cut(s) 361, 672, 840, 859, 863, 892, 1072, 1351
Bse118I RCCGGY 6 cut(s) 70, 760, 933, 974, 1096, 1308
Bse1I ACTGG 2 cut(s) 399, 469
BseBI CCWGG 3 cut(s) 637, 841, 898
BseGI GGATG 2 cut(s) 846, 868
BseLI CCNNNNNNNGG 8 cut(s) 361, 672, 840, 859, 863, 892, 1072, 1351
BseMII CTCAG 4 cut(s) 241, 668, 995, 1319
BseNI ACTGG 2 cut(s) 399, 469
BsePI GCGCGC 2 cut(s) 74, 1178
BseSI GKGCMC 1 cut(s) 320
BseX3I CGGCCG 2 cut(s) 147, 1281
BseXI GCAGC 6 cut(s) 886, 1116, 1215, 1229, 1268, 1333
BseYI CCCAGC 1 cut(s) 458
BsgI GTGCAG 3 cut(s) 559, 1222, 1228
Bsh1236I CGCG 9 cut(s) 76, 191, 254, 275, 452, 909, 1068, 1180, 1182
Bsh1285I CGRYCG 3 cut(s) 150, 814, 1284
BshNI GGYRCC 2 cut(s) 317, 930
BshTI ACCGGT 1 cut(s) 933
BsiEI CGRYCG 3 cut(s) 150, 814, 1284
BsiHKAI GWGCWC 2 cut(s) 683, 1341
BsiHKCI CYCGRG 6 cut(s) 502, 707, 857, 890, 926, 1040
BsiWI CGTACG 1 cut(s) 1263
BslFI GGGAC 2 cut(s) 350, 1136
BslI CCNNNNNNNGG 8 cut(s) 361, 672, 840, 859, 863, 892, 1072, 1351
BsmAI GTCTC 1 cut(s) 167
BsmFI GGGAC 2 cut(s) 350, 1136
BsoBI CYCGRG 6 cut(s) 502, 707, 857, 890, 926, 1040
Bsp119I TTCGAA 2 cut(s) 65, 939
Bsp1286I GDGCHC 4 cut(s) 320, 683, 1078, 1341
Bsp1407I TGTACA 1 cut(s) 1155
Bsp143I GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 836, 1288
Bsp1720I GCTNAGC 1 cut(s) 677
Bsp19I CCATGG 1 cut(s) 878
BspCNI CTCAG 4 cut(s) 240, 669, 996, 1320
BspFNI CGCG 9 cut(s) 76, 191, 254, 275, 452, 909, 1068, 1180, 1182
BspMI ACCTGC 2 cut(s) 599, 1188
BspPI GGATC 7 cut(s) 12, 246, 381, 553, 627, 831, 844
BspQI GCTCTTC 2 cut(s) 1106, 1319
BspT104I TTCGAA 2 cut(s) 65, 939
BspT107I GGYRCC 2 cut(s) 317, 930
BsrBI CCGCTC 1 cut(s) 825
BsrFI RCCGGY 6 cut(s) 70, 760, 933, 974, 1096, 1308
BsrGI TGTACA 1 cut(s) 1155
BsrI ACTGG 2 cut(s) 399, 469
BssAI RCCGGY 6 cut(s) 70, 760, 933, 974, 1096, 1308
BssHII GCGCGC 2 cut(s) 74, 1178
BssMI GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 836, 1288
BssT1I CCWWGG 2 cut(s) 369, 878
Bst2UI CCWGG 3 cut(s) 637, 841, 898
Bst4CI ACNGT 4 cut(s) 31, 82, 739, 1216
Bst6I CTCTTC 2 cut(s) 1106, 1319
BstAUI TGTACA 1 cut(s) 1155
BstBAI YACGTR 2 cut(s) 1237, 1267
BstBI TTCGAA 2 cut(s) 65, 939
BstDEI CTNAG 5 cut(s) 227, 677, 1004, 1273, 1328
BstDSI CCRYGG 3 cut(s) 199, 878, 1066
BstEII GGTNACC 1 cut(s) 1061
BstF5I GGATG 2 cut(s) 846, 868
BstFNI CGCG 9 cut(s) 76, 191, 254, 275, 452, 909, 1068, 1180, 1182
BstH2I RGCGCY 1 cut(s) 975
BstHHI GCGC 7 cut(s) 76, 78, 452, 909, 974, 1180, 1182
BstKTI GATC 8 cut(s) 7, 241, 376, 561, 622, 635, 839, 1291
BstMAI GTCTC 1 cut(s) 167
BstMBI GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 836, 1288
BstMCI CGRYCG 3 cut(s) 150, 814, 1284
BstNI CCWGG 3 cut(s) 637, 841, 898
BstNSI RCATGY 1 cut(s) 1104
BstPAI GACNNNNGTC 1 cut(s) 149
BstPI GGTNACC 1 cut(s) 1061
BstSLI GKGCMC 1 cut(s) 320
BstUI CGCG 9 cut(s) 76, 191, 254, 275, 452, 909, 1068, 1180, 1182
BstV1I GCAGC 6 cut(s) 886, 1116, 1215, 1229, 1268, 1333
BstV2I GAAGAC 2 cut(s) 90, 577
BstX2I RGATCY 6 cut(s) 4, 238, 373, 558, 632, 836
BstYI RGATCY 6 cut(s) 4, 238, 373, 558, 632, 836
BstZI CGGCCG 2 cut(s) 147, 1281
BtgI CCRYGG 3 cut(s) 199, 878, 1066
BtsCI GGATG 2 cut(s) 846, 868
BtsI GCAGTG 1 cut(s) 1123
BtsIMutI CAGTG 2 cut(s) 406, 1123
BveI ACCTGC 2 cut(s) 599, 1188
CaiI CAGNNNCTG 2 cut(s) 672, 1327
CfoI GCGC 7 cut(s) 76, 78, 452, 909, 974, 1180, 1182
Cfr10I RCCGGY 6 cut(s) 70, 760, 933, 974, 1096, 1308
Cfr42I CCGCGG 1 cut(s) 1069
Cfr9I CCCGGG 2 cut(s) 707, 857
CseI GACGC 4 cut(s) 197, 243, 1262, 1310
Csp6I GTAC 4 cut(s) 931, 1132, 1156, 1264
CspAI ACCGGT 1 cut(s) 933
CviAII CATG 4 cut(s) 879, 967, 1101, 1297
CviQI GTAC 4 cut(s) 931, 1132, 1156, 1264
DdeI CTNAG 5 cut(s) 227, 677, 1004, 1273, 1328
DpnI GATC 8 cut(s) 6, 240, 375, 560, 621, 634, 838, 1290
DpnII GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 836, 1288
DraI TTTAAA 1 cut(s) 1011
DriI GACNNNNNGTC 2 cut(s) 581, 1042
EaeI YGGCCR 4 cut(s) 147, 990, 1142, 1281
EagI CGGCCG 2 cut(s) 147, 1281
Eam1104I CTCTTC 2 cut(s) 1106, 1319
Eam1105I GACNNNNNGTC 2 cut(s) 581, 1042
EarI CTCTTC 2 cut(s) 1106, 1319
EciI GGCGGA 1 cut(s) 506
Ecl136II GAGCTC 2 cut(s) 681, 1339
EclXI CGGCCG 2 cut(s) 147, 1281
Eco130I CCWWGG 2 cut(s) 369, 878
Eco147I AGGCCT 1 cut(s) 896
Eco24I GRGCYC 3 cut(s) 683, 1078, 1341
Eco47I GGWCC 8 cut(s) 139, 244, 364, 639, 652, 729, 739, 1036
Eco52I CGGCCG 2 cut(s) 147, 1281
Eco53kI GAGCTC 2 cut(s) 681, 1339
Eco57I CTGAAG 1 cut(s) 589
Eco72I CACGTG 1 cut(s) 1237
Eco88I CYCGRG 6 cut(s) 502, 707, 857, 890, 926, 1040
Eco91I GGTNACC 1 cut(s) 1061
EcoICRI GAGCTC 2 cut(s) 681, 1339
EcoO109I RGGNCCY 1 cut(s) 639
EcoO65I GGTNACC 1 cut(s) 1061
EcoRI GAATTC 1 cut(s) 1048
EcoRII CCWGG 3 cut(s) 635, 839, 896
EcoT14I CCWWGG 2 cut(s) 369, 878
EcoT38I GRGCYC 3 cut(s) 683, 1078, 1341
ErhI CCWWGG 2 cut(s) 369, 878
FaeI CATG 4 cut(s) 882, 970, 1104, 1300
FaiI YATR 6 cut(s) 734, 880, 947, 968, 1102, 1298
FalI AAGNNNNNCTT 4 cut(s) 251, 283, 587, 619
FaqI GGGAC 2 cut(s) 350, 1136
FatI CATG 4 cut(s) 878, 966, 1100, 1296
FauI CCCGC 5 cut(s) 373, 445, 905, 1013, 1064
FblI GTMKAC 1 cut(s) 998
FokI GGATG 2 cut(s) 833, 875
FriOI GRGCYC 3 cut(s) 683, 1078, 1341
FspBI CTAG 1 cut(s) 185
GlaI GCGC 7 cut(s) 75, 77, 451, 908, 973, 1179, 1181
GsaI CCCAGC 1 cut(s) 462
GsuI CTGGAG 2 cut(s) 649, 919
HaeII RGCGCY 1 cut(s) 975
HgaI GACGC 4 cut(s) 197, 243, 1262, 1310
HhaI GCGC 7 cut(s) 76, 78, 452, 909, 974, 1180, 1182
Hin1II CATG 4 cut(s) 882, 970, 1104, 1300
Hin6I GCGC 7 cut(s) 74, 76, 450, 907, 972, 1178, 1180
HinP1I GCGC 7 cut(s) 74, 76, 450, 907, 972, 1178, 1180
HincII GTYRAC 1 cut(s) 999
HindII GTYRAC 1 cut(s) 999
HinfI GANTC 7 cut(s) 24, 389, 507, 924, 953, 995, 1000
HphI GGTGA 4 cut(s) 580, 792, 1202, 1234
Hpy166II GTNNAC 4 cut(s) 88, 334, 742, 999
Hpy188III TCNNGA 5 cut(s) 142, 242, 666, 688, 1034
Hpy8I GTNNAC 4 cut(s) 88, 334, 742, 999
Hpy99I CGWCG 6 cut(s) 86, 155, 431, 527, 923, 1354
HpyAV CCTTC 4 cut(s) 102, 229, 306, 799
HpyCH4III ACNGT 4 cut(s) 31, 82, 739, 1216
HpyCH4IV ACGT 3 cut(s) 869, 1236, 1266
HpyCH4V TGCA 8 cut(s) 114, 540, 594, 646, 1104, 1203, 1245, 1296
HpyF3I CTNAG 5 cut(s) 227, 677, 1004, 1273, 1328
HpySE526I ACGT 3 cut(s) 869, 1236, 1266
Hsp92II CATG 4 cut(s) 882, 970, 1104, 1300
HspAI GCGC 7 cut(s) 74, 76, 450, 907, 972, 1178, 1180
KpnI GGTACC 1 cut(s) 934
KroI GCCGGC 4 cut(s) 70, 974, 1096, 1308
KroNI GCCGGC 4 cut(s) 72, 976, 1098, 1310
KspI CCGCGG 1 cut(s) 1069
Kzo9I GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 836, 1288
LguI GCTCTTC 2 cut(s) 1106, 1319
LmnI GCTCC 4 cut(s) 668, 690, 830, 1081
Lsp1109I GCAGC 6 cut(s) 886, 1116, 1215, 1229, 1268, 1333
LweI GCATC 1 cut(s) 782
MaeI CTAG 1 cut(s) 185
MaeII ACGT 3 cut(s) 869, 1236, 1266
MaeIII GTNAC 3 cut(s) 25, 781, 1061
MalI GATC 8 cut(s) 6, 240, 375, 560, 621, 634, 838, 1290
MbiI CCGCTC 1 cut(s) 825
MboI GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 836, 1288
MboII GAAGA 5 cut(s) 90, 259, 577, 1123, 1306
MflI RGATCY 6 cut(s) 4, 238, 373, 558, 632, 836
MhlI GDGCHC 4 cut(s) 320, 683, 1078, 1341
MluCI AATT 2 cut(s) 51, 1048
MlyI GAGTC 6 cut(s) 33, 398, 918, 947, 994, 1004
MmeI TCCRAC 6 cut(s) 216, 834, 852, 877, 981, 1332
MreI CGCCGGCG 1 cut(s) 974
MroNI GCCGGC 4 cut(s) 70, 974, 1096, 1308
MseI TTAA 1 cut(s) 1010
MslI CAYNNNNRTG 1 cut(s) 480
MspA1I CMGCKG 3 cut(s) 1068, 1259, 1324
MssI GTTTAAAC 1 cut(s) 1011
MvaI CCWGG 3 cut(s) 637, 841, 898
MvnI CGCG 9 cut(s) 76, 191, 254, 275, 452, 909, 1068, 1180, 1182
NaeI GCCGGC 4 cut(s) 72, 976, 1098, 1310
NcoI CCATGG 1 cut(s) 878
NdeII GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 836, 1288
NgoMIV GCCGGC 4 cut(s) 70, 974, 1096, 1308
NlaIII CATG 4 cut(s) 882, 970, 1104, 1300
NmeAIII GCCGAG 1 cut(s) 1018
NmuCI GTSAC 2 cut(s) 25, 781
NspI RCATGY 1 cut(s) 1104
NspV TTCGAA 2 cut(s) 65, 939
PaeI GCATGC 1 cut(s) 1104
PaeR7I CTCGAG 1 cut(s) 890
PaqCI CACCTGC 2 cut(s) 599, 1188
PauI GCGCGC 2 cut(s) 74, 1178
PceI AGGCCT 1 cut(s) 896
PciSI GCTCTTC 2 cut(s) 1106, 1319
PcsI WCGNNNNNNNCGW 1 cut(s) 101
PdiI GCCGGC 4 cut(s) 72, 976, 1098, 1310
PfeI GAWTC 1 cut(s) 507
Pfl23II CGTACG 1 cut(s) 1263
PflFI GACNNNGTC 2 cut(s) 248, 815
PflMI CCANNNNNTGG 1 cut(s) 672
PfoI TCCNGGA 1 cut(s) 338
PinAI ACCGGT 1 cut(s) 933
PleI GAGTC 6 cut(s) 32, 397, 918, 947, 994, 1003
PmaCI CACGTG 1 cut(s) 1237
PmeI GTTTAAAC 1 cut(s) 1011
PmlI CACGTG 1 cut(s) 1237
PpsI GAGTC 6 cut(s) 32, 397, 918, 947, 994, 1003
Ppu21I YACGTR 2 cut(s) 1237, 1267
PpuMI RGGWCCY 1 cut(s) 639
PshAI GACNNNNGTC 1 cut(s) 149
Psp124BI GAGCTC 2 cut(s) 683, 1341
Psp5II RGGWCCY 1 cut(s) 639
Psp6I CCWGG 3 cut(s) 635, 839, 896
PspCI CACGTG 1 cut(s) 1237
PspEI GGTNACC 1 cut(s) 1061
PspFI CCCAGC 1 cut(s) 458
PspGI CCWGG 3 cut(s) 635, 839, 896
PspLI CGTACG 1 cut(s) 1263
PspPPI RGGWCCY 1 cut(s) 639
PspXI VCTCGAGB 1 cut(s) 890
PstNI CAGNNNCTG 2 cut(s) 672, 1327
PsuI RGATCY 6 cut(s) 4, 238, 373, 558, 632, 836
PsyI GACNNNGTC 2 cut(s) 248, 815
PteI GCGCGC 2 cut(s) 74, 1178
RsaI GTAC 4 cut(s) 932, 1133, 1157, 1265
RsaNI GTAC 4 cut(s) 931, 1132, 1156, 1264
RseI CAYNNNNRTG 1 cut(s) 480
SacI GAGCTC 2 cut(s) 683, 1341
SacII CCGCGG 1 cut(s) 1069
SalI GTCGAC 1 cut(s) 997
SapI GCTCTTC 2 cut(s) 1106, 1319
SaqAI TTAA 1 cut(s) 1010
Sau3AI GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 836, 1288
SchI GAGTC 6 cut(s) 33, 398, 918, 947, 994, 1004
SduI GDGCHC 4 cut(s) 320, 683, 1078, 1341
SfaNI GCATC 1 cut(s) 782
Sfr274I CTCGAG 1 cut(s) 890
Sfr303I CCGCGG 1 cut(s) 1069
SfuI TTCGAA 2 cut(s) 65, 939
SgrAI CRCCGGYG 1 cut(s) 974
SgrBI CCGCGG 1 cut(s) 1069
SinI GGWCC 8 cut(s) 139, 244, 364, 639, 652, 729, 739, 1036
SlaI CTCGAG 1 cut(s) 890
SmaI CCCGGG 2 cut(s) 709, 859
SmiMI CAYNNNNRTG 1 cut(s) 480
SmlI CTYRAG 2 cut(s) 546, 890
SmoI CTYRAG 2 cut(s) 546, 890
SphI GCATGC 1 cut(s) 1104
Sse9I AATT 2 cut(s) 51, 1048
SseBI AGGCCT 1 cut(s) 896
SspMI CTAG 1 cut(s) 185
SstI GAGCTC 2 cut(s) 683, 1341
StuI AGGCCT 1 cut(s) 896
StyI CCWWGG 2 cut(s) 369, 878
TaaI ACNGT 4 cut(s) 31, 82, 739, 1216
TaiI ACGT 3 cut(s) 872, 1239, 1269
TaqI TCGA 7 cut(s) 65, 522, 622, 891, 939, 998, 1046
TaqII GACCGA 1 cut(s) 352
TasI AATT 2 cut(s) 51, 1048
TatI WGTACW 1 cut(s) 1155
TfiI GAWTC 1 cut(s) 507
Tru1I TTAA 1 cut(s) 1010
Tru9I TTAA 1 cut(s) 1010
TscAI CASTG 2 cut(s) 406, 1123
TseFI GTSAC 2 cut(s) 25, 781
TseI GCWGC 6 cut(s) 874, 1104, 1203, 1242, 1256, 1321
Tsp45I GTSAC 2 cut(s) 25, 781
TspDTI ATGAA 1 cut(s) 464
TspGWI ACGGA 3 cut(s) 415, 936, 1262
TspMI CCCGGG 2 cut(s) 707, 857
TspRI CASTG 2 cut(s) 406, 1123
Tth111I GACNNNGTC 2 cut(s) 248, 815
Van91I CCANNNNNTGG 1 cut(s) 672
VpaK11BI GGWCC 8 cut(s) 139, 244, 364, 639, 652, 729, 739, 1036
XapI RAATTY 2 cut(s) 51, 1048
XceI RCATGY 1 cut(s) 1104
XhoI CTCGAG 1 cut(s) 890
XmaI CCCGGG 2 cut(s) 707, 857
XmiI GTMKAC 1 cut(s) 998
XspI CTAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.