Rroxscaffold_3G00228740

Protein of unknown function (DUF1005)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0013323
Physical Location & Seq
Forward (+)
13159361 .. 13161539
2179 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00228740.1

Sequence Viewer

Length: 1359 bp
ATGGATCCCTGCCCATTTGTCCGAGTCACAGTGGGCAATCTGGCCCTCAAAATTCCGGTGGCTTCGAAACCGGCGCGCACCGTCGTCCACCCTTCGTCTTCGCCGTGCTTCTGCAAGGTCAAGCTCAACAACCTCCCGGTCCAGACCGCCGTGGTGCCGTGTCTCCCACCGGAGACCCAAACCCTAGACGCGAATAGCCACGGCGTTACCTTCCACCTCAGCAAGTCGGATCTGGACCGGGTCGCGTCCAAGTCCATCTTCGCCGCGAAACTCTGCCTCAAAATCTCAATCTACACGGGGCGAAGGGGCACCACCTGTGGAGTTAACTCCGGGAGGCTATTGGGCCGGGTTTCGGTCCCCTTGGATCTGGCGGGAACCGAGTCCAAGCCCAGTGTGTTTCACAACGGGTGGGTTTCCGTCGGCAAAGGGGCCGGGAAAGGCTCGGGTGCTCGGATTACCCAGTTTCATTTGAATGTCAAGGCGGAACCCGACCCGAGATTCGTGTTTCAGTTCGACGGCGAGCCGGAGTGCAGTCCTCAAGTGTTTCAGATCCGAGGCAATATCAGACAGCCCGTCTTCACCTGCAAGTTCAGCTTCAGAAACACCGGAGATCGAACCCAGAGATCCAGGTCCTTGCAATCTGACCAGAGTAGCTCCAGAAGCTGGCTGAGCTCGTTCGGGAGCGAGCGAGAGCGACCCGGGAGGGAACGCAAAGGCTGGTCCATAACGGTCCACGACCTATCCGGGTCGCCGGTAGCCGCCGCATCAATGGTCACACCCTTCGTGGCCTCACCGGGTTCGGACCGGGTCAGCCGCTCCAACCCCGGATCCTGGCTCATCCTCCGACCCGGGGATGGAACGTGGCAGCCATGGGGCCGCCTCGAGGCCTGGAGAGAGCGCGGCGGGGCCGACGGACTCGGGTACCGGTTCGAACTCATACCCGACACCAACGGCGGCATGAGCGCCGGCGGCATTGTTCTGGCCGAGTCGACTCTGAGTTTAAACAAAGGCGGGAAGTTCGTTCTGGACCTTGGGTCGAATTCCGGGTCGGGTAACCGCGGCGGGGCTCCGGTTGTTCCGAACTCGCCTGCATGCAGCCCGAAGAGCAGTGGGGACTTCGGGTACGGGTTGTGGCCGTATTGCTTGTACAGAGGGTTTGTGATGTCGGCGCGCGTGGAGGGTGAGGGCAGGTGCAGCAAGCCTACGGTGGAAGTGAGCGTTCAGCACGTGACCTGCACGGAGGACGCAGCGGCTTACGTGGCCTTAGCGGCTGCCGTTGATCTCTGCATGGACGCTTGCCGGCTCTTCTCGCAGCGGCTGAGGAAAGAGCTCTGCCAGCCGTCGGATTTGCTCGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1005

Protein Analysis

452

Amino Acids

48.44

Weight (kDa)

9.35

Isoelectric Point (pI)

42.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1005 PF06219 1 - 445 1.3e-208 Protein of unknown function (DUF1005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10020
fragaria_vesca FvH4_5g33420
malus_domestica MD08G1211700.v1.1 MD15G1395200.v1.1
prunus_persica Prupe.1G544000_v2.0.a1
pyrus_communis pycom08g18240 pycom15g35570
rosa_chinensis RchiOBHm_Chr7g0232151
rosa_laevigata RLG00000001387
rosa_multiflora Rmu_sc0000616.1_g000015 Rmu_sc0004780.1_g000008
rosa_roxburghii Rroxscaffold_3G00228740
rosa_rugosa Rorug07G0269800
rosa_samantha Rh7AG424400 Rh7BG398500 Rh7CG444700 Rh7DG416400
rosa_wichuraiana Rw7G035090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 590, 1179
AbsI CCTCGAGG 1 cut(s) 881
Acc36I ACCTGC 3 cut(s) 590, 1179, 1241
Acc65I GGTACC 1 cut(s) 921
AccB1I GGYRCC 3 cut(s) 154, 308, 921
AccB7I CCANNNNNTGG 1 cut(s) 663
AccBSI CCGCTC 1 cut(s) 816
AccI GTMKAC 1 cut(s) 989
AccII CGCG 8 cut(s) 76, 191, 245, 266, 900, 1059, 1171, 1173
AclWI GGATC 7 cut(s) 12, 237, 372, 544, 618, 822, 835
AcoI YGGCCR 2 cut(s) 981, 1133
AcsI RAATTY 2 cut(s) 51, 1039
AcuI CTGAAG 1 cut(s) 580
AcvI CACGTG 1 cut(s) 1228
AfaI GTAC 3 cut(s) 923, 1124, 1148
AfiI CCNNNNNNNGG 8 cut(s) 352, 663, 831, 850, 854, 883, 1063, 1342
AgeI ACCGGT 1 cut(s) 924
AgsI TTSAA 1 cut(s) 472
AhdI GACNNNNNGTC 2 cut(s) 572, 1033
AjnI CCWGG 3 cut(s) 626, 830, 887
AjuI GAANNNNNNNTTGG 2 cut(s) 242, 274
AluBI AGCT 6 cut(s) 124, 594, 654, 663, 672, 1330
AluI AGCT 6 cut(s) 124, 594, 654, 663, 672, 1330
Alw21I GWGCWC 3 cut(s) 451, 674, 1332
Alw26I GTCTC 2 cut(s) 167, 167
AlwI GGATC 7 cut(s) 12, 237, 372, 544, 618, 822, 835
AlwNI CAGNNNCTG 2 cut(s) 663, 1318
Ama87I CYCGRG 6 cut(s) 442, 493, 698, 848, 881, 917
ApeKI GCWGC 6 cut(s) 865, 1095, 1194, 1247, 1271, 1312
ApoI RAATTY 2 cut(s) 51, 1039
ArsI GACNNNNNNTTYG 4 cut(s) 482, 514, 1031, 1063
AsiGI ACCGGT 1 cut(s) 924
Asp718I GGTACC 1 cut(s) 921
AspLEI GCGC 6 cut(s) 76, 78, 900, 965, 1171, 1173
AsuHPI GGTGA 3 cut(s) 571, 783, 1193
AsuII TTCGAA 2 cut(s) 65, 930
AvaI CYCGRG 6 cut(s) 442, 493, 698, 848, 881, 917
AvaII GGWCC 8 cut(s) 139, 235, 355, 630, 720, 730, 802, 1027
BaeGI GKGCMC 1 cut(s) 311
BaeI ACNNNNGTAYC 2 cut(s) 905, 938
BamHI GGATCC 2 cut(s) 4, 827
BanI GGYRCC 3 cut(s) 154, 308, 921
BanII GRGCYC 3 cut(s) 674, 1069, 1332
BbrPI CACGTG 1 cut(s) 1228
BbsI GAAGAC 2 cut(s) 90, 568
Bbv12I GWGCWC 3 cut(s) 451, 674, 1332
BbvCI CCTCAGC 2 cut(s) 218, 1319
BbvI GCAGC 6 cut(s) 877, 1107, 1206, 1258, 1259, 1324
BccI CCATC 2 cut(s) 263, 848
BceAI ACGGC 9 cut(s) 88, 134, 142, 217, 532, 967, 1120, 1259, 1324
BciT130I CCWGG 3 cut(s) 628, 832, 889
BcoDI GTCTC 2 cut(s) 167, 167
BfaI CTAG 1 cut(s) 185
BfoI RGCGCY 1 cut(s) 966
BfuAI ACCTGC 3 cut(s) 590, 1179, 1241
BglI GCCNNNNNGGC 1 cut(s) 1268
BlpI GCTNAGC 1 cut(s) 668
Bme18I GGWCC 8 cut(s) 139, 235, 355, 630, 720, 730, 802, 1027
BmeRI GACNNNNNGTC 2 cut(s) 572, 1033
BmeT110I CYCGRG 6 cut(s) 442, 493, 698, 848, 881, 917
BmrI ACTGGG 2 cut(s) 384, 454
BmsI GCATC 1 cut(s) 773
BmuI ACTGGG 2 cut(s) 384, 454
BpiI GAAGAC 2 cut(s) 90, 568
BpmI CTGGAG 2 cut(s) 640, 910
Bpu10I CCTNAGC 3 cut(s) 218, 1264, 1319
Bpu1102I GCTNAGC 1 cut(s) 668
Bpu14I TTCGAA 2 cut(s) 65, 930
BpuEI CTTGAG 1 cut(s) 522
BsaAI YACGTR 2 cut(s) 1228, 1258
BsaI GGTCTC 1 cut(s) 167
BsaWI WCCGGW 5 cut(s) 55, 169, 605, 924, 1069
Bsc4I CCNNNNNNNGG 8 cut(s) 352, 663, 831, 850, 854, 883, 1063, 1342
Bse118I RCCGGY 5 cut(s) 70, 751, 924, 965, 1299
Bse1I ACTGG 2 cut(s) 390, 460
BseBI CCWGG 3 cut(s) 628, 832, 889
BseGI GGATG 2 cut(s) 837, 859
BseLI CCNNNNNNNGG 8 cut(s) 352, 663, 831, 850, 854, 883, 1063, 1342
BseMII CTCAG 4 cut(s) 232, 659, 986, 1310
BseNI ACTGG 2 cut(s) 390, 460
BsePI GCGCGC 2 cut(s) 74, 1169
BseSI GKGCMC 1 cut(s) 311
BseXI GCAGC 6 cut(s) 877, 1107, 1206, 1258, 1259, 1324
BsgI GTGCAG 3 cut(s) 550, 1213, 1219
Bsh1236I CGCG 8 cut(s) 76, 191, 245, 266, 900, 1059, 1171, 1173
BshNI GGYRCC 3 cut(s) 154, 308, 921
BshTI ACCGGT 1 cut(s) 924
BsiHKAI GWGCWC 3 cut(s) 451, 674, 1332
BsiHKCI CYCGRG 6 cut(s) 442, 493, 698, 848, 881, 917
BslFI GGGAC 2 cut(s) 341, 1127
BslI CCNNNNNNNGG 8 cut(s) 352, 663, 831, 850, 854, 883, 1063, 1342
BsmAI GTCTC 2 cut(s) 167, 167
BsmFI GGGAC 2 cut(s) 341, 1127
Bso31I GGTCTC 1 cut(s) 167
BsoBI CYCGRG 6 cut(s) 442, 493, 698, 848, 881, 917
Bsp119I TTCGAA 2 cut(s) 65, 930
Bsp1286I GDGCHC 5 cut(s) 311, 451, 674, 1069, 1332
Bsp1407I TGTACA 1 cut(s) 1146
Bsp143I GATC 8 cut(s) 4, 229, 364, 549, 610, 623, 827, 1279
Bsp1720I GCTNAGC 1 cut(s) 668
Bsp19I CCATGG 1 cut(s) 869
BspCNI CTCAG 4 cut(s) 231, 660, 987, 1311
BspFNI CGCG 8 cut(s) 76, 191, 245, 266, 900, 1059, 1171, 1173
BspMI ACCTGC 3 cut(s) 590, 1179, 1241
BspPI GGATC 7 cut(s) 12, 237, 372, 544, 618, 822, 835
BspQI GCTCTTC 2 cut(s) 1097, 1310
BspT104I TTCGAA 2 cut(s) 65, 930
BspT107I GGYRCC 3 cut(s) 154, 308, 921
BspTNI GGTCTC 1 cut(s) 167
BsrBI CCGCTC 1 cut(s) 816
BsrFI RCCGGY 5 cut(s) 70, 751, 924, 965, 1299
BsrGI TGTACA 1 cut(s) 1146
BsrI ACTGG 2 cut(s) 390, 460
BssAI RCCGGY 5 cut(s) 70, 751, 924, 965, 1299
BssHII GCGCGC 2 cut(s) 74, 1169
BssMI GATC 8 cut(s) 4, 229, 364, 549, 610, 623, 827, 1279
BssT1I CCWWGG 3 cut(s) 360, 869, 1030
Bst2UI CCWGG 3 cut(s) 628, 832, 889
Bst4CI ACNGT 4 cut(s) 31, 82, 730, 1207
Bst6I CTCTTC 2 cut(s) 1097, 1310
BstAUI TGTACA 1 cut(s) 1146
BstBAI YACGTR 2 cut(s) 1228, 1258
BstBI TTCGAA 2 cut(s) 65, 930
BstDEI CTNAG 5 cut(s) 218, 668, 995, 1264, 1319
BstDSI CCRYGG 4 cut(s) 150, 199, 869, 1057
BstEII GGTNACC 1 cut(s) 1052
BstF5I GGATG 2 cut(s) 837, 859
BstFNI CGCG 8 cut(s) 76, 191, 245, 266, 900, 1059, 1171, 1173
BstH2I RGCGCY 1 cut(s) 966
BstHHI GCGC 6 cut(s) 76, 78, 900, 965, 1171, 1173
BstKTI GATC 8 cut(s) 7, 232, 367, 552, 613, 626, 830, 1282
BstMAI GTCTC 2 cut(s) 167, 167
BstMBI GATC 8 cut(s) 4, 229, 364, 549, 610, 623, 827, 1279
BstNI CCWGG 3 cut(s) 628, 832, 889
BstNSI RCATGY 1 cut(s) 1095
BstPI GGTNACC 1 cut(s) 1052
BstSLI GKGCMC 1 cut(s) 311
BstUI CGCG 8 cut(s) 76, 191, 245, 266, 900, 1059, 1171, 1173
BstV1I GCAGC 6 cut(s) 877, 1107, 1206, 1258, 1259, 1324
BstV2I GAAGAC 2 cut(s) 90, 568
BstX2I RGATCY 6 cut(s) 4, 229, 364, 549, 623, 827
BstYI RGATCY 6 cut(s) 4, 229, 364, 549, 623, 827
BtgI CCRYGG 4 cut(s) 150, 199, 869, 1057
BtsCI GGATG 2 cut(s) 837, 859
BtsI GCAGTG 1 cut(s) 1114
BtsIMutI CAGTG 3 cut(s) 36, 397, 1114
BveI ACCTGC 3 cut(s) 590, 1179, 1241
CaiI CAGNNNCTG 2 cut(s) 663, 1318
CfoI GCGC 6 cut(s) 76, 78, 900, 965, 1171, 1173
Cfr10I RCCGGY 5 cut(s) 70, 751, 924, 965, 1299
Cfr42I CCGCGG 1 cut(s) 1060
Cfr9I CCCGGG 2 cut(s) 698, 848
CpoI CGGWCCG 1 cut(s) 802
CseI GACGC 4 cut(s) 197, 234, 1253, 1301
Csp6I GTAC 3 cut(s) 922, 1123, 1147
CspAI ACCGGT 1 cut(s) 924
CspI CGGWCCG 1 cut(s) 802
CviAII CATG 4 cut(s) 870, 958, 1092, 1288
CviQI GTAC 3 cut(s) 922, 1123, 1147
DdeI CTNAG 5 cut(s) 218, 668, 995, 1264, 1319
DpnI GATC 8 cut(s) 6, 231, 366, 551, 612, 625, 829, 1281
DpnII GATC 8 cut(s) 4, 229, 364, 549, 610, 623, 827, 1279
DraI TTTAAA 1 cut(s) 1002
DriI GACNNNNNGTC 2 cut(s) 572, 1033
EaeI YGGCCR 2 cut(s) 981, 1133
Eam1104I CTCTTC 2 cut(s) 1097, 1310
Eam1105I GACNNNNNGTC 2 cut(s) 572, 1033
EarI CTCTTC 2 cut(s) 1097, 1310
EciI GGCGGA 1 cut(s) 497
Ecl136II GAGCTC 2 cut(s) 672, 1330
Eco130I CCWWGG 3 cut(s) 360, 869, 1030
Eco147I AGGCCT 1 cut(s) 887
Eco24I GRGCYC 3 cut(s) 674, 1069, 1332
Eco31I GGTCTC 1 cut(s) 167
Eco47I GGWCC 8 cut(s) 139, 235, 355, 630, 720, 730, 802, 1027
Eco53kI GAGCTC 2 cut(s) 672, 1330
Eco57I CTGAAG 1 cut(s) 580
Eco72I CACGTG 1 cut(s) 1228
Eco88I CYCGRG 6 cut(s) 442, 493, 698, 848, 881, 917
Eco91I GGTNACC 1 cut(s) 1052
EcoICRI GAGCTC 2 cut(s) 672, 1330
EcoO109I RGGNCCY 1 cut(s) 630
EcoO65I GGTNACC 1 cut(s) 1052
EcoRI GAATTC 1 cut(s) 1039
EcoRII CCWGG 3 cut(s) 626, 830, 887
EcoT14I CCWWGG 3 cut(s) 360, 869, 1030
EcoT38I GRGCYC 3 cut(s) 674, 1069, 1332
ErhI CCWWGG 3 cut(s) 360, 869, 1030
FaeI CATG 4 cut(s) 873, 961, 1095, 1291
FaiI YATR 6 cut(s) 725, 871, 938, 959, 1093, 1289
FalI AAGNNNNNCTT 4 cut(s) 242, 274, 578, 610
FaqI GGGAC 2 cut(s) 341, 1127
FatI CATG 4 cut(s) 869, 957, 1091, 1287
FauI CCCGC 4 cut(s) 364, 896, 1004, 1055
FblI GTMKAC 1 cut(s) 989
FokI GGATG 2 cut(s) 824, 866
FriOI GRGCYC 3 cut(s) 674, 1069, 1332
FspBI CTAG 1 cut(s) 185
GlaI GCGC 6 cut(s) 75, 77, 899, 964, 1170, 1172
GsuI CTGGAG 2 cut(s) 640, 910
HaeII RGCGCY 1 cut(s) 966
HgaI GACGC 4 cut(s) 197, 234, 1253, 1301
HhaI GCGC 6 cut(s) 76, 78, 900, 965, 1171, 1173
Hin1II CATG 4 cut(s) 873, 961, 1095, 1291
Hin6I GCGC 6 cut(s) 74, 76, 898, 963, 1169, 1171
HinP1I GCGC 6 cut(s) 74, 76, 898, 963, 1169, 1171
HincII GTYRAC 2 cut(s) 325, 990
HindII GTYRAC 2 cut(s) 325, 990
HinfI GANTC 6 cut(s) 24, 380, 498, 915, 986, 991
HpaI GTTAAC 1 cut(s) 325
HphI GGTGA 3 cut(s) 571, 783, 1193
Hpy166II GTNNAC 4 cut(s) 88, 325, 733, 990
Hpy188III TCNNGA 5 cut(s) 142, 233, 657, 679, 1025
Hpy8I GTNNAC 4 cut(s) 88, 325, 733, 990
Hpy99I CGWCG 5 cut(s) 86, 422, 518, 914, 1345
HpyAV CCTTC 4 cut(s) 102, 220, 297, 790
HpyCH4III ACNGT 4 cut(s) 31, 82, 730, 1207
HpyCH4IV ACGT 3 cut(s) 860, 1227, 1257
HpyCH4V TGCA 9 cut(s) 114, 531, 585, 637, 1091, 1095, 1194, 1236, 1287
HpyF3I CTNAG 5 cut(s) 218, 668, 995, 1264, 1319
HpySE526I ACGT 3 cut(s) 860, 1227, 1257
Hsp92II CATG 4 cut(s) 873, 961, 1095, 1291
HspAI GCGC 6 cut(s) 74, 76, 898, 963, 1169, 1171
KpnI GGTACC 1 cut(s) 925
KroI GCCGGC 2 cut(s) 965, 1299
KroNI GCCGGC 2 cut(s) 967, 1301
KspAI GTTAAC 1 cut(s) 325
KspI CCGCGG 1 cut(s) 1060
Kzo9I GATC 8 cut(s) 4, 229, 364, 549, 610, 623, 827, 1279
LguI GCTCTTC 2 cut(s) 1097, 1310
LmnI GCTCC 4 cut(s) 659, 681, 821, 1072
Lsp1109I GCAGC 6 cut(s) 877, 1107, 1206, 1258, 1259, 1324
LweI GCATC 1 cut(s) 773
MaeI CTAG 1 cut(s) 185
MaeII ACGT 3 cut(s) 860, 1227, 1257
MaeIII GTNAC 5 cut(s) 25, 205, 772, 1052, 1228
MalI GATC 8 cut(s) 6, 231, 366, 551, 612, 625, 829, 1281
MbiI CCGCTC 1 cut(s) 816
MboI GATC 8 cut(s) 4, 229, 364, 549, 610, 623, 827, 1279
MboII GAAGA 5 cut(s) 90, 250, 568, 1114, 1297
MflI RGATCY 6 cut(s) 4, 229, 364, 549, 623, 827
MhlI GDGCHC 5 cut(s) 311, 451, 674, 1069, 1332
MluCI AATT 2 cut(s) 51, 1039
MlyI GAGTC 5 cut(s) 33, 389, 909, 985, 995
MmeI TCCRAC 4 cut(s) 207, 843, 868, 1323
MreI CGCCGGCG 1 cut(s) 965
MroNI GCCGGC 2 cut(s) 965, 1299
MseI TTAA 2 cut(s) 324, 1001
MslI CAYNNNNRTG 1 cut(s) 471
MspA1I CMGCKG 3 cut(s) 1059, 1250, 1315
MssI GTTTAAAC 1 cut(s) 1002
MvaI CCWGG 3 cut(s) 628, 832, 889
MvnI CGCG 8 cut(s) 76, 191, 245, 266, 900, 1059, 1171, 1173
NaeI GCCGGC 2 cut(s) 967, 1301
NcoI CCATGG 1 cut(s) 869
NdeII GATC 8 cut(s) 4, 229, 364, 549, 610, 623, 827, 1279
NgoMIV GCCGGC 2 cut(s) 965, 1299
NlaIII CATG 4 cut(s) 873, 961, 1095, 1291
NmeAIII GCCGAG 1 cut(s) 1009
NmuCI GTSAC 3 cut(s) 25, 772, 1228
NspI RCATGY 1 cut(s) 1095
NspV TTCGAA 2 cut(s) 65, 930
PaeI GCATGC 1 cut(s) 1095
PaeR7I CTCGAG 1 cut(s) 881
PaqCI CACCTGC 2 cut(s) 590, 1179
PauI GCGCGC 2 cut(s) 74, 1169
PceI AGGCCT 1 cut(s) 887
PciSI GCTCTTC 2 cut(s) 1097, 1310
PcsI WCGNNNNNNNCGW 1 cut(s) 101
PdiI GCCGGC 2 cut(s) 967, 1301
PfeI GAWTC 1 cut(s) 498
PflFI GACNNNGTC 2 cut(s) 239, 806
PflMI CCANNNNNTGG 1 cut(s) 663
PfoI TCCNGGA 1 cut(s) 329
PinAI ACCGGT 1 cut(s) 924
PleI GAGTC 5 cut(s) 32, 388, 909, 985, 994
PmaCI CACGTG 1 cut(s) 1228
PmeI GTTTAAAC 1 cut(s) 1002
PmlI CACGTG 1 cut(s) 1228
PpsI GAGTC 5 cut(s) 32, 388, 909, 985, 994
Ppu21I YACGTR 2 cut(s) 1228, 1258
PpuMI RGGWCCY 1 cut(s) 630
Psp124BI GAGCTC 2 cut(s) 674, 1332
Psp5II RGGWCCY 1 cut(s) 630
Psp6I CCWGG 3 cut(s) 626, 830, 887
PspCI CACGTG 1 cut(s) 1228
PspEI GGTNACC 1 cut(s) 1052
PspGI CCWGG 3 cut(s) 626, 830, 887
PspPPI RGGWCCY 1 cut(s) 630
PspXI VCTCGAGB 1 cut(s) 881
PstNI CAGNNNCTG 2 cut(s) 663, 1318
PsuI RGATCY 6 cut(s) 4, 229, 364, 549, 623, 827
PsyI GACNNNGTC 2 cut(s) 239, 806
PteI GCGCGC 2 cut(s) 74, 1169
RsaI GTAC 3 cut(s) 923, 1124, 1148
RsaNI GTAC 3 cut(s) 922, 1123, 1147
RseI CAYNNNNRTG 1 cut(s) 471
Rsr2I CGGWCCG 1 cut(s) 802
RsrII CGGWCCG 1 cut(s) 802
SacI GAGCTC 2 cut(s) 674, 1332
SacII CCGCGG 1 cut(s) 1060
SalI GTCGAC 1 cut(s) 988
SapI GCTCTTC 2 cut(s) 1097, 1310
SaqAI TTAA 2 cut(s) 324, 1001
Sau3AI GATC 8 cut(s) 4, 229, 364, 549, 610, 623, 827, 1279
SchI GAGTC 5 cut(s) 33, 389, 909, 985, 995
SduI GDGCHC 5 cut(s) 311, 451, 674, 1069, 1332
SfaNI GCATC 1 cut(s) 773
Sfr274I CTCGAG 1 cut(s) 881
Sfr303I CCGCGG 1 cut(s) 1060
SfuI TTCGAA 2 cut(s) 65, 930
SgrAI CRCCGGYG 1 cut(s) 965
SgrBI CCGCGG 1 cut(s) 1060
SinI GGWCC 8 cut(s) 139, 235, 355, 630, 720, 730, 802, 1027
SlaI CTCGAG 1 cut(s) 881
SmaI CCCGGG 2 cut(s) 700, 850
SmiMI CAYNNNNRTG 1 cut(s) 471
SmlI CTYRAG 2 cut(s) 537, 881
SmoI CTYRAG 2 cut(s) 537, 881
SphI GCATGC 1 cut(s) 1095
Sse9I AATT 2 cut(s) 51, 1039
SseBI AGGCCT 1 cut(s) 887
SspMI CTAG 1 cut(s) 185
SstI GAGCTC 2 cut(s) 674, 1332
StuI AGGCCT 1 cut(s) 887
StyI CCWWGG 3 cut(s) 360, 869, 1030
TaaI ACNGT 4 cut(s) 31, 82, 730, 1207
TaiI ACGT 3 cut(s) 863, 1230, 1260
TaqI TCGA 7 cut(s) 65, 513, 613, 882, 930, 989, 1037
TaqII GACCGA 1 cut(s) 343
TasI AATT 2 cut(s) 51, 1039
TatI WGTACW 1 cut(s) 1146
TfiI GAWTC 1 cut(s) 498
Tru1I TTAA 2 cut(s) 324, 1001
Tru9I TTAA 2 cut(s) 324, 1001
TscAI CASTG 3 cut(s) 36, 397, 1114
TseFI GTSAC 3 cut(s) 25, 772, 1228
TseI GCWGC 6 cut(s) 865, 1095, 1194, 1247, 1271, 1312
Tsp45I GTSAC 3 cut(s) 25, 772, 1228
TspDTI ATGAA 1 cut(s) 455
TspGWI ACGGA 3 cut(s) 406, 927, 1253
TspMI CCCGGG 2 cut(s) 698, 848
TspRI CASTG 3 cut(s) 36, 397, 1114
Tth111I GACNNNGTC 2 cut(s) 239, 806
Van91I CCANNNNNTGG 1 cut(s) 663
VpaK11BI GGWCC 8 cut(s) 139, 235, 355, 630, 720, 730, 802, 1027
XapI RAATTY 2 cut(s) 51, 1039
XceI RCATGY 1 cut(s) 1095
XhoI CTCGAG 1 cut(s) 881
XmaI CCCGGG 2 cut(s) 698, 848
XmiI GTMKAC 1 cut(s) 989
XspI CTAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.