Rw7G035090

Protein of unknown function (DUF1005)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0013323
Physical Location & Seq
Reverse (-)
52239664 .. 52242016
2353 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G035090.1

Sequence Viewer

Length: 1362 bp
ATGGATCCCTGCCCGTTTGTCCGAGTCACAGTCGGCAATCTGGCCCTCAAAATTCCGGTGGCTTCGAAGCCGGCGCGCACCGTCGTCCACCCTTCGTCTTCGCCGTGTTTCTGCAAGGTCAAGCTCAACAACCTCCCGGTCCAGACGGCCGTCGTGCCGTGTCTCCCACCGGAAACCCAAACCCTAGACGCGAATAGCCACGGCGTAATAGCCGCTACCTTCCACCTCAGCAAGTCGGATCTGGACCGGGTCGCGTCCAAGTCCATATTCGCCGCGAAACTCTGCCTCAAAATCTCAATCTACACGGGGCGAAGGGGCACCACCTGTGGAGTGAACTCCGGGAGGCTATTGGGCCGGGTTTCGGTCCCCTTGGATCTGGCGGGAACCGAGTCCAAGCCCAGTGTGTTCCACAACGGGTGGGTTTCCGTCGGCAAAGGGGCCGGGAAAGGCGCGGGTGCTGGGATTACTCAGTTTCATTTGAATGTCAAGGCGGAACCCGACCCGAGATTCGTTTTTCAGTTCGACGGCGAGCCGGAGTGCAGTCCTCAAGTGTTTCAGATCCGAGGCAATATCAGACAGCCCGTCTTCACCTGCAAGTTCAGCTTCAGAAACACCGGAGATCGAACCCAGAGATCCAGGTCCTTGCAATCGGACCAGAGTAGCTCCAGAAGCTGGCTGAGCTCTTCGCGAGCGAGAGCGACCCGGGAGGGAACGCAAAGGCTGGTCCATAACGGTCCACGACCTATCCGGGTCGCCGGTAGCCGCCGCATCAATGGTCACACCCTTCGTGGCCTCACCGGGTTCCGACCGGTCAGCCGCTCCAACCCCGGATCCTGGCTCATCCTCCGACCCGGGGATGGAACGTGGCAGCCATGGGGCCGCCTCGAGGCCTGGAGAGAGCGCGGCGGGGCCGACGGACTCGGGTACCGGTTCGAACTCATACCCGACTCCAACGGCGGCATGAGCGCCGGCGGCATTGTTCTGGCCGAGTCGACTCTGAGTTTAAACAAAGGCGGGAAGTTCGTTCTGGACCTCGGGTCGAATTCCGGGTCGGGTAACCGCGGCGGGGCTCCGGTTGTTCCGAACTCGCCGGCATGCAGCCCGAAGAGTAGTGGGGACTTCGGGTACGGGTTGTGGCCGTATTGCTTGTACAGAGGGTTTGTGATGTCGGCGCGCGTGGAGGGTGAGGGCAGGTGCAGCAAGCCTACAGTGGAGGTGAGCGTTCAGCACGTGAGCTGCACGGAGGACGCAGCGGCGTACGTGGCCTTAGCGGCGGCCGTTGATCTCTGCATGGACGCTTGCCGGCTCTTCTCGCAGCGGCTGAGGAAAGAGCTCTGCCAGCCGTCGGATTTGCTCGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1005

Protein Analysis

453

Amino Acids

48.54

Weight (kDa)

9.77

Isoelectric Point (pI)

43.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1005 PF06219 1 - 446 8.1e-174 Protein of unknown function (DUF1005)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10020
fragaria_vesca FvH4_5g33420
malus_domestica MD08G1211700.v1.1 MD15G1395200.v1.1
prunus_persica Prupe.1G544000_v2.0.a1
pyrus_communis pycom08g18240 pycom15g35570
rosa_chinensis RchiOBHm_Chr7g0232151
rosa_laevigata RLG00000001387
rosa_multiflora Rmu_sc0000616.1_g000015 Rmu_sc0004780.1_g000008
rosa_roxburghii Rroxscaffold_3G00228740
rosa_rugosa Rorug07G0269800
rosa_samantha Rh7AG424400 Rh7BG398500 Rh7CG444700 Rh7DG416400
rosa_wichuraiana Rw7G035090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 599, 1182
AbsI CCTCGAGG 1 cut(s) 884
Acc36I ACCTGC 2 cut(s) 599, 1182
Acc65I GGTACC 1 cut(s) 924
AccB1I GGYRCC 2 cut(s) 317, 924
AccB7I CCANNNNNTGG 1 cut(s) 672
AccBSI CCGCTC 1 cut(s) 819
AccI GTMKAC 1 cut(s) 992
AclWI GGATC 7 cut(s) 12, 246, 381, 553, 627, 825, 838
AcoI YGGCCR 4 cut(s) 147, 984, 1136, 1275
AcsI RAATTY 2 cut(s) 51, 1042
AcuI CTGAAG 1 cut(s) 589
AcvI CACGTG 1 cut(s) 1231
AfaI GTAC 4 cut(s) 926, 1127, 1151, 1259
AfiI CCNNNNNNNGG 8 cut(s) 361, 672, 834, 853, 857, 886, 1066, 1345
AgeI ACCGGT 2 cut(s) 808, 927
AgsI TTSAA 1 cut(s) 481
AhdI GACNNNNNGTC 2 cut(s) 581, 1036
AjnI CCWGG 3 cut(s) 635, 833, 890
AjuI GAANNNNNNNTTGG 2 cut(s) 251, 283
AluBI AGCT 7 cut(s) 124, 603, 663, 672, 681, 1236, 1333
AluI AGCT 7 cut(s) 124, 603, 663, 672, 681, 1236, 1333
Alw21I GWGCWC 2 cut(s) 683, 1335
Alw26I GTCTC 1 cut(s) 167
AlwI GGATC 7 cut(s) 12, 246, 381, 553, 627, 825, 838
AlwNI CAGNNNCTG 2 cut(s) 672, 1321
Ama87I CYCGRG 6 cut(s) 502, 702, 851, 884, 920, 1034
ApeKI GCWGC 6 cut(s) 868, 1098, 1197, 1236, 1250, 1315
ApoI RAATTY 2 cut(s) 51, 1042
ArsI GACNNNNNNTTYG 4 cut(s) 491, 523, 1034, 1066
AsiGI ACCGGT 2 cut(s) 808, 927
Asp718I GGTACC 1 cut(s) 924
AspLEI GCGC 7 cut(s) 76, 78, 452, 903, 968, 1174, 1176
AsuHPI GGTGA 4 cut(s) 580, 787, 1196, 1228
AsuII TTCGAA 2 cut(s) 65, 933
AvaI CYCGRG 6 cut(s) 502, 702, 851, 884, 920, 1034
AvaII GGWCC 8 cut(s) 139, 244, 364, 639, 652, 724, 734, 1030
BaeGI GKGCMC 1 cut(s) 320
BaeI ACNNNNGTAYC 2 cut(s) 908, 941
BamHI GGATCC 2 cut(s) 4, 830
BanI GGYRCC 2 cut(s) 317, 924
BanII GRGCYC 3 cut(s) 683, 1072, 1335
BbrPI CACGTG 1 cut(s) 1231
BbsI GAAGAC 2 cut(s) 90, 577
Bbv12I GWGCWC 2 cut(s) 683, 1335
BbvCI CCTCAGC 2 cut(s) 227, 1322
BbvI GCAGC 6 cut(s) 880, 1110, 1209, 1223, 1262, 1327
BccI CCATC 1 cut(s) 851
BciT130I CCWGG 3 cut(s) 637, 835, 892
BcoDI GTCTC 1 cut(s) 167
BfaI CTAG 1 cut(s) 185
BfmI CTRYAG 1 cut(s) 1206
BfoI RGCGCY 1 cut(s) 969
BfuAI ACCTGC 2 cut(s) 599, 1182
BglI GCCNNNNNGGC 1 cut(s) 1271
BlpI GCTNAGC 1 cut(s) 677
Bme18I GGWCC 8 cut(s) 139, 244, 364, 639, 652, 724, 734, 1030
BmeRI GACNNNNNGTC 2 cut(s) 581, 1036
BmeT110I CYCGRG 6 cut(s) 502, 702, 851, 884, 920, 1034
BmrI ACTGGG 1 cut(s) 393
BmsI GCATC 1 cut(s) 777
BmuI ACTGGG 1 cut(s) 393
BoxI GACNNNNGTC 1 cut(s) 149
BpiI GAAGAC 2 cut(s) 90, 577
BpmI CTGGAG 2 cut(s) 649, 913
Bpu10I CCTNAGC 3 cut(s) 227, 1267, 1322
Bpu1102I GCTNAGC 1 cut(s) 677
Bpu14I TTCGAA 2 cut(s) 65, 933
BpuEI CTTGAG 1 cut(s) 531
BsaAI YACGTR 2 cut(s) 1231, 1261
BsaWI WCCGGW 6 cut(s) 55, 169, 614, 808, 927, 1072
Bsc4I CCNNNNNNNGG 8 cut(s) 361, 672, 834, 853, 857, 886, 1066, 1345
Bse118I RCCGGY 7 cut(s) 70, 755, 808, 927, 968, 1090, 1302
Bse1I ACTGG 1 cut(s) 399
BseBI CCWGG 3 cut(s) 637, 835, 892
BseGI GGATG 2 cut(s) 840, 862
BseLI CCNNNNNNNGG 8 cut(s) 361, 672, 834, 853, 857, 886, 1066, 1345
BseMII CTCAG 5 cut(s) 241, 482, 668, 989, 1313
BseNI ACTGG 1 cut(s) 399
BsePI GCGCGC 2 cut(s) 74, 1172
BseSI GKGCMC 1 cut(s) 320
BseX3I CGGCCG 2 cut(s) 147, 1275
BseXI GCAGC 6 cut(s) 880, 1110, 1209, 1223, 1262, 1327
BseYI CCCAGC 1 cut(s) 458
BsgI GTGCAG 3 cut(s) 559, 1216, 1222
Bsh1285I CGRYCG 3 cut(s) 150, 809, 1278
BshNI GGYRCC 2 cut(s) 317, 924
BshTI ACCGGT 2 cut(s) 808, 927
BsiEI CGRYCG 3 cut(s) 150, 809, 1278
BsiHKAI GWGCWC 2 cut(s) 683, 1335
BsiHKCI CYCGRG 6 cut(s) 502, 702, 851, 884, 920, 1034
BsiWI CGTACG 1 cut(s) 1257
BslFI GGGAC 2 cut(s) 350, 1130
BslI CCNNNNNNNGG 8 cut(s) 361, 672, 834, 853, 857, 886, 1066, 1345
BsmAI GTCTC 1 cut(s) 167
BsmFI GGGAC 2 cut(s) 350, 1130
BsoBI CYCGRG 6 cut(s) 502, 702, 851, 884, 920, 1034
Bsp119I TTCGAA 2 cut(s) 65, 933
Bsp1286I GDGCHC 4 cut(s) 320, 683, 1072, 1335
Bsp1407I TGTACA 1 cut(s) 1149
Bsp143I GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 830, 1282
Bsp1720I GCTNAGC 1 cut(s) 677
Bsp19I CCATGG 1 cut(s) 872
Bsp68I TCGCGA 1 cut(s) 688
BspCNI CTCAG 5 cut(s) 240, 481, 669, 990, 1314
BspMI ACCTGC 2 cut(s) 599, 1182
BspPI GGATC 7 cut(s) 12, 246, 381, 553, 627, 825, 838
BspQI GCTCTTC 2 cut(s) 688, 1313
BspT104I TTCGAA 2 cut(s) 65, 933
BspT107I GGYRCC 2 cut(s) 317, 924
BsrBI CCGCTC 1 cut(s) 819
BsrFI RCCGGY 7 cut(s) 70, 755, 808, 927, 968, 1090, 1302
BsrGI TGTACA 1 cut(s) 1149
BsrI ACTGG 1 cut(s) 399
BssAI RCCGGY 7 cut(s) 70, 755, 808, 927, 968, 1090, 1302
BssHII GCGCGC 2 cut(s) 74, 1172
BssMI GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 830, 1282
BssT1I CCWWGG 2 cut(s) 369, 872
Bst2UI CCWGG 3 cut(s) 637, 835, 892
Bst4CI ACNGT 4 cut(s) 31, 82, 734, 1210
Bst6I CTCTTC 3 cut(s) 688, 1100, 1313
BstAUI TGTACA 1 cut(s) 1149
BstBAI YACGTR 2 cut(s) 1231, 1261
BstBI TTCGAA 2 cut(s) 65, 933
BstDEI CTNAG 6 cut(s) 227, 468, 677, 998, 1267, 1322
BstDSI CCRYGG 3 cut(s) 199, 872, 1060
BstEII GGTNACC 1 cut(s) 1055
BstF5I GGATG 2 cut(s) 840, 862
BstH2I RGCGCY 1 cut(s) 969
BstHHI GCGC 7 cut(s) 76, 78, 452, 903, 968, 1174, 1176
BstKTI GATC 8 cut(s) 7, 241, 376, 561, 622, 635, 833, 1285
BstMAI GTCTC 1 cut(s) 167
BstMBI GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 830, 1282
BstMCI CGRYCG 3 cut(s) 150, 809, 1278
BstNI CCWGG 3 cut(s) 637, 835, 892
BstNSI RCATGY 1 cut(s) 1098
BstPAI GACNNNNGTC 1 cut(s) 149
BstPI GGTNACC 1 cut(s) 1055
BstSFI CTRYAG 1 cut(s) 1206
BstSLI GKGCMC 1 cut(s) 320
BstV1I GCAGC 6 cut(s) 880, 1110, 1209, 1223, 1262, 1327
BstV2I GAAGAC 2 cut(s) 90, 577
BstX2I RGATCY 6 cut(s) 4, 238, 373, 558, 632, 830
BstYI RGATCY 6 cut(s) 4, 238, 373, 558, 632, 830
BstZI CGGCCG 2 cut(s) 147, 1275
BtgI CCRYGG 3 cut(s) 199, 872, 1060
BtsCI GGATG 2 cut(s) 840, 862
BtsIMutI CAGTG 2 cut(s) 406, 1215
BtuMI TCGCGA 1 cut(s) 688
BveI ACCTGC 2 cut(s) 599, 1182
CaiI CAGNNNCTG 2 cut(s) 672, 1321
CfoI GCGC 7 cut(s) 76, 78, 452, 903, 968, 1174, 1176
Cfr10I RCCGGY 7 cut(s) 70, 755, 808, 927, 968, 1090, 1302
Cfr42I CCGCGG 1 cut(s) 1063
Cfr9I CCCGGG 2 cut(s) 702, 851
CseI GACGC 4 cut(s) 197, 243, 1256, 1304
Csp6I GTAC 4 cut(s) 925, 1126, 1150, 1258
CspAI ACCGGT 2 cut(s) 808, 927
CviAII CATG 4 cut(s) 873, 961, 1095, 1291
CviQI GTAC 4 cut(s) 925, 1126, 1150, 1258
DdeI CTNAG 6 cut(s) 227, 468, 677, 998, 1267, 1322
DpnI GATC 8 cut(s) 6, 240, 375, 560, 621, 634, 832, 1284
DpnII GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 830, 1282
DraI TTTAAA 1 cut(s) 1005
DriI GACNNNNNGTC 2 cut(s) 581, 1036
EaeI YGGCCR 4 cut(s) 147, 984, 1136, 1275
EagI CGGCCG 2 cut(s) 147, 1275
Eam1104I CTCTTC 3 cut(s) 688, 1100, 1313
Eam1105I GACNNNNNGTC 2 cut(s) 581, 1036
EarI CTCTTC 3 cut(s) 688, 1100, 1313
EciI GGCGGA 1 cut(s) 506
Ecl136II GAGCTC 2 cut(s) 681, 1333
EclXI CGGCCG 2 cut(s) 147, 1275
Eco130I CCWWGG 2 cut(s) 369, 872
Eco147I AGGCCT 1 cut(s) 890
Eco24I GRGCYC 3 cut(s) 683, 1072, 1335
Eco47I GGWCC 8 cut(s) 139, 244, 364, 639, 652, 724, 734, 1030
Eco52I CGGCCG 2 cut(s) 147, 1275
Eco53kI GAGCTC 2 cut(s) 681, 1333
Eco57I CTGAAG 1 cut(s) 589
Eco72I CACGTG 1 cut(s) 1231
Eco88I CYCGRG 6 cut(s) 502, 702, 851, 884, 920, 1034
Eco91I GGTNACC 1 cut(s) 1055
EcoICRI GAGCTC 2 cut(s) 681, 1333
EcoO109I RGGNCCY 1 cut(s) 639
EcoO65I GGTNACC 1 cut(s) 1055
EcoRI GAATTC 1 cut(s) 1042
EcoRII CCWGG 3 cut(s) 635, 833, 890
EcoT14I CCWWGG 2 cut(s) 369, 872
EcoT38I GRGCYC 3 cut(s) 683, 1072, 1335
ErhI CCWWGG 2 cut(s) 369, 872
FaeI CATG 4 cut(s) 876, 964, 1098, 1294
FaiI YATR 7 cut(s) 266, 729, 874, 941, 962, 1096, 1292
FalI AAGNNNNNCTT 2 cut(s) 587, 619
FaqI GGGAC 2 cut(s) 350, 1130
FatI CATG 4 cut(s) 872, 960, 1094, 1290
FauI CCCGC 5 cut(s) 373, 445, 899, 1007, 1058
FblI GTMKAC 1 cut(s) 992
FokI GGATG 2 cut(s) 827, 869
FriOI GRGCYC 3 cut(s) 683, 1072, 1335
FspBI CTAG 1 cut(s) 185
GlaI GCGC 7 cut(s) 75, 77, 451, 902, 967, 1173, 1175
GsaI CCCAGC 1 cut(s) 462
GsuI CTGGAG 2 cut(s) 649, 913
HaeII RGCGCY 1 cut(s) 969
HgaI GACGC 4 cut(s) 197, 243, 1256, 1304
HhaI GCGC 7 cut(s) 76, 78, 452, 903, 968, 1174, 1176
Hin1II CATG 4 cut(s) 876, 964, 1098, 1294
Hin6I GCGC 7 cut(s) 74, 76, 450, 901, 966, 1172, 1174
HinP1I GCGC 7 cut(s) 74, 76, 450, 901, 966, 1172, 1174
HincII GTYRAC 1 cut(s) 993
HindII GTYRAC 1 cut(s) 993
HinfI GANTC 7 cut(s) 24, 389, 507, 918, 947, 989, 994
HphI GGTGA 4 cut(s) 580, 787, 1196, 1228
Hpy166II GTNNAC 4 cut(s) 88, 334, 737, 993
Hpy188III TCNNGA 5 cut(s) 142, 242, 666, 687, 1028
Hpy8I GTNNAC 4 cut(s) 88, 334, 737, 993
Hpy99I CGWCG 6 cut(s) 86, 155, 431, 527, 917, 1348
HpyAV CCTTC 4 cut(s) 102, 229, 306, 794
HpyCH4III ACNGT 4 cut(s) 31, 82, 734, 1210
HpyCH4IV ACGT 3 cut(s) 863, 1230, 1260
HpyCH4V TGCA 8 cut(s) 114, 540, 594, 646, 1098, 1197, 1239, 1290
HpyF3I CTNAG 6 cut(s) 227, 468, 677, 998, 1267, 1322
HpySE526I ACGT 3 cut(s) 863, 1230, 1260
Hsp92II CATG 4 cut(s) 876, 964, 1098, 1294
HspAI GCGC 7 cut(s) 74, 76, 450, 901, 966, 1172, 1174
KpnI GGTACC 1 cut(s) 928
KroI GCCGGC 4 cut(s) 70, 968, 1090, 1302
KroNI GCCGGC 4 cut(s) 72, 970, 1092, 1304
KspI CCGCGG 1 cut(s) 1063
Kzo9I GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 830, 1282
LguI GCTCTTC 2 cut(s) 688, 1313
LmnI GCTCC 3 cut(s) 668, 824, 1075
Lsp1109I GCAGC 6 cut(s) 880, 1110, 1209, 1223, 1262, 1327
LweI GCATC 1 cut(s) 777
MaeI CTAG 1 cut(s) 185
MaeII ACGT 3 cut(s) 863, 1230, 1260
MaeIII GTNAC 3 cut(s) 25, 776, 1055
MalI GATC 8 cut(s) 6, 240, 375, 560, 621, 634, 832, 1284
MbiI CCGCTC 1 cut(s) 819
MboI GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 830, 1282
MboII GAAGA 5 cut(s) 90, 577, 675, 1117, 1300
MflI RGATCY 6 cut(s) 4, 238, 373, 558, 632, 830
MhlI GDGCHC 4 cut(s) 320, 683, 1072, 1335
MluCI AATT 2 cut(s) 51, 1042
MlyI GAGTC 6 cut(s) 33, 398, 912, 941, 988, 998
MmeI TCCRAC 6 cut(s) 216, 829, 846, 871, 975, 1326
MreI CGCCGGCG 1 cut(s) 968
MroNI GCCGGC 4 cut(s) 70, 968, 1090, 1302
MseI TTAA 1 cut(s) 1004
MslI CAYNNNNRTG 1 cut(s) 480
MspA1I CMGCKG 3 cut(s) 1062, 1253, 1318
MssI GTTTAAAC 1 cut(s) 1005
MvaI CCWGG 3 cut(s) 637, 835, 892
NaeI GCCGGC 4 cut(s) 72, 970, 1092, 1304
NcoI CCATGG 1 cut(s) 872
NdeII GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 830, 1282
NgoMIV GCCGGC 4 cut(s) 70, 968, 1090, 1302
NlaIII CATG 4 cut(s) 876, 964, 1098, 1294
NmeAIII GCCGAG 1 cut(s) 1012
NmuCI GTSAC 2 cut(s) 25, 776
NruI TCGCGA 1 cut(s) 688
NspI RCATGY 1 cut(s) 1098
NspV TTCGAA 2 cut(s) 65, 933
PaeI GCATGC 1 cut(s) 1098
PaeR7I CTCGAG 1 cut(s) 884
PaqCI CACCTGC 2 cut(s) 599, 1182
PauI GCGCGC 2 cut(s) 74, 1172
PceI AGGCCT 1 cut(s) 890
PciSI GCTCTTC 2 cut(s) 688, 1313
PcsI WCGNNNNNNNCGW 1 cut(s) 101
PdiI GCCGGC 4 cut(s) 72, 970, 1092, 1304
PfeI GAWTC 1 cut(s) 507
Pfl23II CGTACG 1 cut(s) 1257
PflFI GACNNNGTC 1 cut(s) 248
PflMI CCANNNNNTGG 1 cut(s) 672
PfoI TCCNGGA 1 cut(s) 338
PinAI ACCGGT 2 cut(s) 808, 927
PleI GAGTC 6 cut(s) 32, 397, 912, 941, 988, 997
PmaCI CACGTG 1 cut(s) 1231
PmeI GTTTAAAC 1 cut(s) 1005
PmlI CACGTG 1 cut(s) 1231
PpsI GAGTC 6 cut(s) 32, 397, 912, 941, 988, 997
Ppu21I YACGTR 2 cut(s) 1231, 1261
PpuMI RGGWCCY 1 cut(s) 639
PshAI GACNNNNGTC 1 cut(s) 149
Psp124BI GAGCTC 2 cut(s) 683, 1335
Psp5II RGGWCCY 1 cut(s) 639
Psp6I CCWGG 3 cut(s) 635, 833, 890
PspCI CACGTG 1 cut(s) 1231
PspEI GGTNACC 1 cut(s) 1055
PspFI CCCAGC 1 cut(s) 458
PspGI CCWGG 3 cut(s) 635, 833, 890
PspLI CGTACG 1 cut(s) 1257
PspPPI RGGWCCY 1 cut(s) 639
PspXI VCTCGAGB 1 cut(s) 884
PstNI CAGNNNCTG 2 cut(s) 672, 1321
PsuI RGATCY 6 cut(s) 4, 238, 373, 558, 632, 830
PsyI GACNNNGTC 1 cut(s) 248
PteI GCGCGC 2 cut(s) 74, 1172
RruI TCGCGA 1 cut(s) 688
RsaI GTAC 4 cut(s) 926, 1127, 1151, 1259
RsaNI GTAC 4 cut(s) 925, 1126, 1150, 1258
RseI CAYNNNNRTG 1 cut(s) 480
SacI GAGCTC 2 cut(s) 683, 1335
SacII CCGCGG 1 cut(s) 1063
SalI GTCGAC 1 cut(s) 991
SapI GCTCTTC 2 cut(s) 688, 1313
SaqAI TTAA 1 cut(s) 1004
Sau3AI GATC 8 cut(s) 4, 238, 373, 558, 619, 632, 830, 1282
SchI GAGTC 6 cut(s) 33, 398, 912, 941, 988, 998
SduI GDGCHC 4 cut(s) 320, 683, 1072, 1335
SfaNI GCATC 1 cut(s) 777
SfcI CTRYAG 1 cut(s) 1206
Sfr274I CTCGAG 1 cut(s) 884
Sfr303I CCGCGG 1 cut(s) 1063
SfuI TTCGAA 2 cut(s) 65, 933
SgrAI CRCCGGYG 1 cut(s) 968
SgrBI CCGCGG 1 cut(s) 1063
SinI GGWCC 8 cut(s) 139, 244, 364, 639, 652, 724, 734, 1030
SlaI CTCGAG 1 cut(s) 884
SmaI CCCGGG 2 cut(s) 704, 853
SmiMI CAYNNNNRTG 1 cut(s) 480
SmlI CTYRAG 2 cut(s) 546, 884
SmoI CTYRAG 2 cut(s) 546, 884
SphI GCATGC 1 cut(s) 1098
Sse9I AATT 2 cut(s) 51, 1042
SseBI AGGCCT 1 cut(s) 890
SspMI CTAG 1 cut(s) 185
SstI GAGCTC 2 cut(s) 683, 1335
StuI AGGCCT 1 cut(s) 890
StyI CCWWGG 2 cut(s) 369, 872
TaaI ACNGT 4 cut(s) 31, 82, 734, 1210
TaiI ACGT 3 cut(s) 866, 1233, 1263
TaqI TCGA 7 cut(s) 65, 522, 622, 885, 933, 992, 1040
TaqII GACCGA 1 cut(s) 352
TasI AATT 2 cut(s) 51, 1042
TatI WGTACW 1 cut(s) 1149
TfiI GAWTC 1 cut(s) 507
Tru1I TTAA 1 cut(s) 1004
Tru9I TTAA 1 cut(s) 1004
TscAI CASTG 2 cut(s) 406, 1215
TseFI GTSAC 2 cut(s) 25, 776
TseI GCWGC 6 cut(s) 868, 1098, 1197, 1236, 1250, 1315
Tsp45I GTSAC 2 cut(s) 25, 776
TspDTI ATGAA 1 cut(s) 464
TspGWI ACGGA 3 cut(s) 415, 930, 1256
TspMI CCCGGG 2 cut(s) 702, 851
TspRI CASTG 2 cut(s) 406, 1215
Tth111I GACNNNGTC 1 cut(s) 248
Van91I CCANNNNNTGG 1 cut(s) 672
VpaK11BI GGWCC 8 cut(s) 139, 244, 364, 639, 652, 724, 734, 1030
XapI RAATTY 2 cut(s) 51, 1042
XceI RCATGY 1 cut(s) 1098
XhoI CTCGAG 1 cut(s) 884
XmaI CCCGGG 2 cut(s) 702, 851
XmiI GTMKAC 1 cut(s) 992
XspI CTAG 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.