Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002382

Physical Location & Seq

Genomic Coordinates Reverse (-)

24970706 .. 24977062

Gene Structure 6357 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g34300.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3171 bp

ATGGCGGAGCCACACTCCACCACCACCGCCTCTCACCCACCTCAATTCTATGAAACCCTAACCTCCAGTTCTCCTTTCTCTTCCACTGATCTCCGCCGCGACACCGAGCCTCCTAAACCGGCCGATCACGACGGCGATGAGCCGCTCTCGTCGCTCTGTATTCCCGGTTCGAAACTGGTCCGAACCGGGTCCGTACTCTCCGCTTGCTCAGATAATGAGCCTGTGATGTTTGTGAATGCTGGAGGGGAGGGTTTATTGGAAACTAGTAATGTCGGTTTTCAAGTCGAGGGTGACAAGTTTTTCCAAGGAGGGAATGTTATAAGAACTGATGAAGCTATTGAAGGGAGTGATATGCCGTCCATTTATCAATCTGCACGTTTTGGGAATTTTGCTTATCGGTTTGAGAATTGGTGTCCTGGAGATTATTTTGTGGATCTTCATTTTTCGGAGATTGTATACACCAATGGTCCGAAAGGGATGAGGGTGTTTGATGTCTTCATGCAGGAAGAGAAGGTTATGTCTGAAATTGATATATATTCTGTCATTGGAGCAAATAAGGCACTACAGGTGGTAGATGTCAGAGTGTCTGTGGGGGAGGATGGGGTACTCGTAATAAGGTTCGAAGGAGTGAATGGAAGTCCAATAGTTAGTGGAATTTGTATAAAGCGGCCAAGATTATCAGCATCAAAGGTGAATTGTGGAAATCTTGTGTGTAACAATTGTGCTGCTGAGATAGAAATCTCATCTGGTCAGGAAAAGTATATAAGGATGCAGTTCATTGCCAAGTATGAAAAGAAGATAGAAGAGCTTAAGACCTGGTTTCAGCTGAAGACAGATGAATGTCATGAAGCTTGGATGTCACTGACAACAGCAAATAAACAGCTACAGGACATCACCATGGAACTCGATAACAAGTCATATACAATTCATTGTCTAGGTCAAGCGAGAGAAGAAACTGAAGCAAAATTCAGAGATATCTCTGGCAAATATGAACATGATAAGAGGATGTGGACTGCAGTCGTTGACAAATTAGAAAGGGGAGTTAGATTGATGAAGCAAGAATATTATCAGCTGTACTGTGAAGTGCACAAGTGTGCTGATGCAGTTCCAGAATTGAGCAATATGGTATCTGCAGTTCAAGCTATGGTCACACAGTGCAAGGATCTTAAGTTTAAGCTAAGCGAGGAGCAGGCAAAGAGGAAGATACTTTATAACCAAATTCAGGAGGCAAAAGGGAACATCAGGGTGTTTTGTCGGTGTCGTCCATTAAGGAAAGAGGAGTCACCAGCTGGGCATGCAACTGTTGTACAGTTTGATGCAGCCAAGGATGGAGAGCTTGGTATAATTTCAAGTGGCTCCAATAAGAAGATATTCAAATTTGACAGAGTTTACACACCAGAGGATGATCAAGCCGATGTATTTGCAGATGCTTCGCCTATGATAACTTCAGTATTAGATGGCTACAATGTTTGTATCTTTGCATATGGTCAAACTGGGACAGGAAAGACATTCACAATGGAAGGTCCTGAGTCTAACAGAGGGGTCAACTATAGAACCTTGGAACAGCTGTTTATAGCTGCTGAGGAGAGGAAAGAAATTTTTACATACAACATATCTGTTAGCGTGCTTGAGGTCTATAATGAGCAAATCAGAGACTTGCTAGCCACCTCTTCAACATCCAAAAAGTTGGAGATGAGGCAATCTTCTGAAGGCACTCATCACATGCCTGGACTTATTGAAGCAAAAGTTGAGAACATTAAAGAGGTCTGGAGAATTCTGCAAGCTGGAAGCAATGCAAGGGCAACAGGATCAAACAATGTGAACGAACATAGCAGCCGATCTCATTGCATACTTTGCATAATGGTAAGAGCAAAGAATATGATGACTGGCAACTGCACCATGAGCAAGCTTTGGCTTGTGGACCTTGCTGGCAGTGAGAGGCTGGCAAAAACAGAAGTTCAAGGGGAACGTCTTAAGGAAGCTCAAAACATCAATAGATCTTTATCAGCTCTTGGTGATGTTATCTCTGCTTTGGCAGCTAAGAAAAGCCACATTCCTTATAGGAATTCCAAGCTCACACGTCTACTTCAAGACTCCTTGGGTGGAGATGCTAAAACTCTGATGTTTGTCCAAATTAGCCCTTCAGAGCAGGACCTGAATGAGACTTTAAGTTCTCTAAACTTTGCAGCACGGGTTCGAGGGGTTGAATTAGGTCCTGCAAAGAAGCAGGTGGATACTGGTGAGGTTCAAAAGCTAAGAAACCAGAATGACAAGCTAAAGCAAGAGTTGAGATCTAAAGAAGATGCTCTCCGAAAAGTAGAAGAAAACTTTCAGAATCTGGAAAATAAGGCAAAAGGTGATTATCAAATGTGTAGAAGCCAACAAGATAAGATCGATGAACTTGAAAAGCAAATTGCGTTGAAGATCGATTTATCCAGACGACTAGAAAACCAGTTGTTACAAGCAAATGAAAAGGCAGAAGCTTACTTGGATCTTCAAAGAAAGGTCAAGGAGCTTGAGCACAAGCAGAAAGAAAATGAGCATGCATATCCCATGATTCTTCATGAGAAGGTGAAAGACCTTGAGAACAAGTTGAAAGAAAGAACTCGAGAGCTTGAGCATCATTCAGCAGTTGCTCAATGGAAGGTTCAAGAACTTGAAGAAAAGTTGGCAATGAAAGAGAACAACAAAGGGTTTCAGTTGCTTCAACAAAAGGTGAAAGAGCTTGAAGAAAAGTTGAGATGGCACGAACGAGAACGTGCATCATTAGCATTTTCTACCGAGAACTCAGAAGCCACCCCCATTCAAACAACATGCTTGAGACATGAGACTGTTGGCGATGTCAATCCCCTGAGTCAAAGGAGCTTCAGCTATATTAATCAAATGACAGACCATGGGTCTGCCCTGCTCAAAGTTCCTGAATCACTTCACGAGATTAGGAGAAAAAGAGAGTTCCAAAGCAAAGGACATGAGAATTTCGTACAGCCTGCTACATTGACTGATGGGAAGATGTTTTCGGGTGAACCAAATAGAGGAAAGTCCGGTACACATAAAGCATTGGCTAGGATCACGAGAAGTATAAAACCAGGAACTACTCAAAAATCATACCCTAACATCAGAAATGATAGAGATCAGGTTCCATCAGTCAAGTCAAGGATCTGGTTGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin Malectin

Protein Analysis

1057

Amino Acids

119.56

Weight (kDa)

6.83

Isoelectric Point (pI)

42.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	222 - 382	4e-45	Microtubule binding
Kinesin	PF00225	247 - 562	6e-116	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22610 AT2G22610 AT2G22610
fragaria_vesca	FvH4_1g19311 FvH4_1g19311 FvH4_1g19311 FvH4_1g19311 FvH4_1g19311 FvH4_5g34300 FvH4_5g34300
malus_domestica	MD08G1202900.v1.1 MD15G1388700.v1.1
prunus_persica	Prupe.1G535100_v2.0.a1 Prupe.6G205100_v2.0.a1 Prupe.6G205100_v2.0.a1 Prupe.6G205100_v2.0.a1 Prupe.6G205100_v2.0.a1 Prupe.6G205100_v2.0.a1 Prupe.6G205100_v2.0.a1
pyrus_communis	pycom08g17520 pycom15g34860
rosa_chinensis	RchiOBHm_Chr2g0110681 RchiOBHm_Chr7g0234871
rosa_laevigata	RLG00000001208 RLG00000017830
rosa_multiflora	Rmu_sc0000039.1_g000002 Rmu_sc0000389.1_g000040 Rmu_sc0040758.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133040 Rroxscaffold_3G00226690
rosa_rugosa	Rorug02G0168600 Rorug02G0168600 Rorug07G0285900
rosa_samantha	Rh2AG220900 Rh2BG231000 Rh2CG223300 Rh2DG227100 Rh7AG440500 Rh7BG413300 Rh7CG462200 Rh7DG430200
rosa_wichuraiana	Rw7G036620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	320, 1212
AarI	CACCTGC	1 cut(s)	2218
Acc36I	ACCTGC	1 cut(s)	2218
AccBSI	CCGCTC	1 cut(s)	145
AccI	GTMKAC	2 cut(s)	456, 2083
AccII	CGCG	1 cut(s)	99
AciI	CCGC	7 cut(s)	5, 27, 94, 97, 143, 201, 667
AclWI	GGATC	6 cut(s)	441, 1170, 1816, 2499, 3074, 3164
AcoI	YGGCCR	2 cut(s)	120, 668
AcsI	RAATTY	9 cut(s)	385, 654, 965, 1218, 1376, 1596, 1773, 2065, 2974
AcuI	CTGAAG	6 cut(s)	848, 978, 1431, 1728, 2127, 2851
AdeI	CACNNNGTG	1 cut(s)	1155
AfaI	GTAC	6 cut(s)	195, 606, 1076, 1308, 2982, 3046
AfiI	CCNNNNNNNGG	2 cut(s)	1222, 3032
AflII	CTTAAG	3 cut(s)	809, 1166, 1973
AflIII	ACRYGT	1 cut(s)	2078
AhdI	GACNNNNNGTC	1 cut(s)	2896
AhlI	ACTAGT	1 cut(s)	263
AjiI	CACGTC	1 cut(s)	2081
AjnI	CCWGG	4 cut(s)	415, 815, 1726, 3085
AleI	CACNNNNGTG	1 cut(s)	1092
Alw21I	GWGCWC	2 cut(s)	1089, 2523
Alw26I	GTCTC	4 cut(s)	1647, 2156, 2815, 2822
Alw44I	GTGCAC	1 cut(s)	1085
AlwI	GGATC	6 cut(s)	441, 1170, 1816, 2499, 3074, 3164
AlwNI	CAGNNNCTG	2 cut(s)	2155, 2338
Ama87I	CYCGRG	1 cut(s)	2607
AoxI	GGCC	2 cut(s)	120, 668
ApaLI	GTGCAC	1 cut(s)	1085
ApeKI	GCWGC	6 cut(s)	725, 1319, 1577, 1833, 2036, 2186
ApoI	RAATTY	9 cut(s)	385, 654, 965, 1218, 1376, 1596, 1773, 2065, 2974
AseI	ATTAAT	1 cut(s)	2877
Asp700I	GAANNNNTTC	3 cut(s)	1370, 2328, 2925
AspS9I	GGNCC	7 cut(s)	178, 189, 467, 1523, 1921, 2152, 2213
AsuC2I	CCSGG	2 cut(s)	165, 187
AsuII	TTCGAA	2 cut(s)	170, 621
AsuNHI	GCTAGC	1 cut(s)	1660
AvaI	CYCGRG	1 cut(s)	2607
AvaII	GGWCC	7 cut(s)	178, 189, 467, 1523, 1921, 2152, 2213
BaeGI	GKGCMC	1 cut(s)	1089
BauI	CACGAG	2 cut(s)	2930, 3070
BbsI	GAAGAC	2 cut(s)	487, 836
Bbv12I	GWGCWC	2 cut(s)	1089, 2523
BbvCI	CCTCAGC	1 cut(s)	1581
BbvI	GCAGC	6 cut(s)	712, 1331, 1564, 1845, 2048, 2198
BccI	CCATC	6 cut(s)	593, 1322, 1451, 2736, 2996, 3148
BceAI	ACGGC	2 cut(s)	148, 340
BcgI	CGANNNNNNTGC	6 cut(s)	1403, 1413, 1437, 1447, 1827, 1861
BciT130I	CCWGG	4 cut(s)	417, 817, 1728, 3087
BciVI	GTATCC	1 cut(s)	2227
BclI	TGATCA	1 cut(s)	1405
BcnI	CCSGG	2 cut(s)	165, 187
BcoDI	GTCTC	4 cut(s)	1647, 2156, 2815, 2822
BcuI	ACTAGT	1 cut(s)	263
BfaI	CTAG	5 cut(s)	264, 935, 1661, 2444, 3063
BfmI	CTRYAG	5 cut(s)	563, 884, 1014, 1131, 1549
BfrI	CTTAAG	3 cut(s)	809, 1166, 1973
BfuAI	ACCTGC	1 cut(s)	2218
BfuI	GTATCC	1 cut(s)	2227
BglII	AGATCT	2 cut(s)	1997, 2291
BisI	GCNGC	9 cut(s)	97, 143, 668, 726, 1320, 1578, 1834, 2037, 2187
BlpI	GCTNAGC	1 cut(s)	1178
BlsI	GCNGC	9 cut(s)	98, 144, 669, 727, 1321, 1579, 1835, 2038, 2188
Bme1390I	CCNGG	6 cut(s)	165, 187, 417, 817, 1728, 3087
Bme18I	GGWCC	7 cut(s)	178, 189, 467, 1523, 1921, 2152, 2213
BmeRI	GACNNNNNGTC	1 cut(s)	2896
BmeT110I	CYCGRG	1 cut(s)	2607
BmgBI	CACGTC	1 cut(s)	2081
BmgT120I	GGNCC	7 cut(s)	178, 189, 467, 1523, 1921, 2152, 2213
BmiI	GGNNCC	4 cut(s)	9, 190, 1357, 3138
BmrFI	CCNGG	6 cut(s)	165, 187, 417, 817, 1728, 3087
BmrI	ACTGGG	1 cut(s)	1503
BmsI	GCATC	9 cut(s)	692, 759, 1090, 1306, 1417, 2098, 2293, 2629, 2771
BmtI	GCTAGC	1 cut(s)	1664
BmuI	ACTGGG	1 cut(s)	1503
BoxI	GACNNNNGTC	1 cut(s)	1016
BpiI	GAAGAC	2 cut(s)	487, 836
BplI	GAGNNNNNCTC	3 cut(s)	31, 131, 163
BpmI	CTGGAG	4 cut(s)	49, 261, 438, 1789
Bpu10I	CCTNAGC	1 cut(s)	1581
Bpu1102I	GCTNAGC	1 cut(s)	1178
Bpu14I	TTCGAA	2 cut(s)	170, 621
BpuEI	CTTGAG	5 cut(s)	1649, 2537, 2603, 2636, 2839
BpuMI	CCSGG	2 cut(s)	165, 187
Bsa29I	ATCGAT	2 cut(s)	2394, 2427
BsaBI	GATNNNNATC	4 cut(s)	737, 2002, 2844, 3129
BsaJI	CCNNGG	6 cut(s)	304, 897, 1323, 1557, 2097, 2893
BsaWI	WCCGGW	1 cut(s)	3041
BsaXI	ACNNNNNCTCC	4 cut(s)	94, 124, 300, 330
Bsc4I	CCNNNNNNNGG	2 cut(s)	1222, 3032
Bse118I	RCCGGY	1 cut(s)	118
Bse1I	ACTGG	6 cut(s)	66, 180, 1498, 1891, 2242, 2452
Bse3DI	GCAATG	4 cut(s)	777, 1798, 1843, 2679
Bse8I	GATNNNNATC	4 cut(s)	737, 2002, 2844, 3129
BseBI	CCWGG	4 cut(s)	417, 817, 1728, 3087
BseCI	ATCGAT	2 cut(s)	2394, 2427
BseDI	CCNNGG	6 cut(s)	304, 897, 1323, 1557, 2097, 2893
BseGI	GGATG	8 cut(s)	483, 604, 774, 861, 1011, 1333, 1408, 1676
BseJI	GATNNNNATC	4 cut(s)	737, 2002, 2844, 3129
BseLI	CCNNNNNNNGG	2 cut(s)	1222, 3032
BseMI	GCAATG	4 cut(s)	777, 1798, 1843, 2679
BseMII	CTCAG	6 cut(s)	222, 720, 1518, 1572, 2802, 2843
BseNI	ACTGG	6 cut(s)	66, 180, 1498, 1891, 2242, 2452
BseRI	GAGGAG	3 cut(s)	1199, 1292, 1598
BseSI	GKGCMC	1 cut(s)	1089
BseX3I	CGGCCG	1 cut(s)	120
BseXI	GCAGC	6 cut(s)	712, 1331, 1564, 1845, 2048, 2198
BseYI	CCCAGC	1 cut(s)	1289
BsgI	GTGCAG	2 cut(s)	357, 1879
Bsh1236I	CGCG	1 cut(s)	99
Bsh1285I	CGRYCG	1 cut(s)	123
BshFI	GGCC	2 cut(s)	122, 670
BshVI	ATCGAT	2 cut(s)	2394, 2427
BsiEI	CGRYCG	1 cut(s)	123
BsiHKAI	GWGCWC	2 cut(s)	1089, 2523
BsiHKCI	CYCGRG	1 cut(s)	2607
BsiSI	CCGG	4 cut(s)	119, 165, 186, 3042
BslFI	GGGAC	1 cut(s)	1510
BslI	CCNNNNNNNGG	2 cut(s)	1222, 3032
BsmAI	GTCTC	4 cut(s)	1647, 2156, 2815, 2822
BsmFI	GGGAC	1 cut(s)	1510
BsmI	GAATGC	1 cut(s)	241
BsnI	GGCC	2 cut(s)	122, 670
BsoBI	CYCGRG	1 cut(s)	2607
Bsp119I	TTCGAA	2 cut(s)	170, 621
Bsp1286I	GDGCHC	2 cut(s)	1089, 2523
Bsp1407I	TGTACA	1 cut(s)	1306
Bsp1720I	GCTNAGC	1 cut(s)	1178
Bsp19I	CCATGG	2 cut(s)	897, 2893
BspACI	CCGC	7 cut(s)	5, 27, 94, 97, 143, 201, 667
BspANI	GGCC	2 cut(s)	122, 670
BspCNI	CTCAG	6 cut(s)	221, 721, 1519, 1573, 2801, 2844
BspDI	ATCGAT	2 cut(s)	2394, 2427
BspFNI	CGCG	1 cut(s)	99
BspHI	TCATGA	2 cut(s)	844, 2563
BspLI	GGNNCC	4 cut(s)	9, 190, 1357, 3138
BspMAI	CTGCAG	2 cut(s)	1018, 1135
BspMI	ACCTGC	1 cut(s)	2218
BspOI	GCTAGC	1 cut(s)	1664
BspPI	GGATC	6 cut(s)	441, 1170, 1816, 2499, 3074, 3164
BspQI	GCTCTTC	1 cut(s)	798
BspT104I	TTCGAA	2 cut(s)	170, 621
BspTI	CTTAAG	3 cut(s)	809, 1166, 1973
BsrBI	CCGCTC	1 cut(s)	145
BsrDI	GCAATG	4 cut(s)	777, 1798, 1843, 2679
BsrFI	RCCGGY	1 cut(s)	118
BsrGI	TGTACA	1 cut(s)	1306
BsrI	ACTGG	6 cut(s)	66, 180, 1498, 1891, 2242, 2452
BssAI	RCCGGY	1 cut(s)	118
BssECI	CCNNGG	6 cut(s)	304, 897, 1323, 1557, 2097, 2893
BssNAI	GTATAC	1 cut(s)	457
BssSI	CACGAG	2 cut(s)	2930, 3070
BssT1I	CCWWGG	6 cut(s)	304, 897, 1323, 1557, 2097, 2893
Bst1107I	GTATAC	1 cut(s)	457
Bst2BI	CACGAG	2 cut(s)	2930, 3070
Bst2UI	CCWGG	4 cut(s)	417, 817, 1728, 3087
Bst4CI	ACNGT	5 cut(s)	1079, 1155, 1303, 1311, 2833
Bst6I	CTCTTC	4 cut(s)	85, 501, 798, 1675
BstAFI	CTTAAG	3 cut(s)	809, 1166, 1973
BstAPI	GCANNNNNTGC	1 cut(s)	1854
BstAUI	TGTACA	1 cut(s)	1306
BstBI	TTCGAA	2 cut(s)	170, 621
BstDEI	CTNAG	9 cut(s)	208, 729, 1178, 1527, 1581, 2040, 2255, 2788, 2852
BstDSI	CCRYGG	2 cut(s)	897, 2893
BstF5I	GGATG	8 cut(s)	483, 604, 774, 861, 1011, 1333, 1408, 1676
BstFNI	CGCG	1 cut(s)	99
BstMAI	GTCTC	4 cut(s)	1647, 2156, 2815, 2822
BstMCI	CGRYCG	1 cut(s)	123
BstMWI	GCNNNNNNNGC	8 cut(s)	151, 557, 1139, 1295, 1854, 1902, 2036, 2768
BstNI	CCWGG	4 cut(s)	417, 817, 1728, 3087
BstNSI	RCATGY	4 cut(s)	1298, 1726, 2546, 2817
BstPAI	GACNNNNGTC	1 cut(s)	1016
BstSCI	CCNGG	6 cut(s)	163, 185, 415, 815, 1726, 3085
BstSFI	CTRYAG	5 cut(s)	563, 884, 1014, 1131, 1549
BstSLI	GKGCMC	1 cut(s)	1089
BstUI	CGCG	1 cut(s)	99
BstV1I	GCAGC	6 cut(s)	712, 1331, 1564, 1845, 2048, 2198
BstV2I	GAAGAC	2 cut(s)	487, 836
BstX2I	RGATCY	6 cut(s)	433, 1162, 1997, 2291, 2491, 3156
BstXI	CCANNNNNNTGG	1 cut(s)	1687
BstYI	RGATCY	6 cut(s)	433, 1162, 1997, 2291, 2491, 3156
BstZ17I	GTATAC	1 cut(s)	457
BstZI	CGGCCG	1 cut(s)	120
Bsu15I	ATCGAT	2 cut(s)	2394, 2427
BsuI	GTATCC	1 cut(s)	2227
BsuRI	GGCC	2 cut(s)	122, 670
BsuTUI	ATCGAT	2 cut(s)	2394, 2427
BtgI	CCRYGG	2 cut(s)	897, 2893
BtgZI	GCGATG	2 cut(s)	150, 2853
BtrI	CACGTC	1 cut(s)	2081
BtsCI	GGATG	8 cut(s)	483, 604, 774, 861, 1011, 1333, 1408, 1676
BtsI	GCAGTG	1 cut(s)	1939
BtsIMutI	CAGTG	4 cut(s)	84, 860, 1160, 1939
BveI	ACCTGC	1 cut(s)	2218
CaiI	CAGNNNCTG	2 cut(s)	2155, 2338
CciI	TCATGA	2 cut(s)	844, 2563
Cfr10I	RCCGGY	1 cut(s)	118
Cfr13I	GGNCC	7 cut(s)	178, 189, 467, 1523, 1921, 2152, 2213
ClaI	ATCGAT	2 cut(s)	2394, 2427
CsiI	ACCWGGT	1 cut(s)	815
Csp6I	GTAC	6 cut(s)	194, 605, 1075, 1307, 2981, 3045
CviQI	GTAC	6 cut(s)	194, 605, 1075, 1307, 2981, 3045
DdeI	CTNAG	9 cut(s)	208, 729, 1178, 1527, 1581, 2040, 2255, 2788, 2852
DraIII	CACNNNGTG	1 cut(s)	1155
DriI	GACNNNNNGTC	1 cut(s)	2896
EaeI	YGGCCR	2 cut(s)	120, 668
EagI	CGGCCG	1 cut(s)	120
Eam1104I	CTCTTC	4 cut(s)	85, 501, 798, 1675
Eam1105I	GACNNNNNGTC	1 cut(s)	2896
EarI	CTCTTC	4 cut(s)	85, 501, 798, 1675
EciI	GGCGGA	2 cut(s)	20, 83
EclXI	CGGCCG	1 cut(s)	120
Eco130I	CCWWGG	6 cut(s)	304, 897, 1323, 1557, 2097, 2893
Eco32I	GATATC	1 cut(s)	976
Eco47I	GGWCC	7 cut(s)	178, 189, 467, 1523, 1921, 2152, 2213
Eco52I	CGGCCG	1 cut(s)	120
Eco57I	CTGAAG	6 cut(s)	848, 978, 1431, 1728, 2127, 2851
Eco88I	CYCGRG	1 cut(s)	2607
EcoO109I	RGGNCCY	3 cut(s)	1523, 2152, 2213
EcoRI	GAATTC	2 cut(s)	1773, 2065
EcoRII	CCWGG	4 cut(s)	415, 815, 1726, 3085
EcoRV	GATATC	1 cut(s)	976
EcoT14I	CCWWGG	6 cut(s)	304, 897, 1323, 1557, 2097, 2893
EcoT22I	ATGCAT	1 cut(s)	2548
ErhI	CCWWGG	6 cut(s)	304, 897, 1323, 1557, 2097, 2893
FaqI	GGGAC	1 cut(s)	1510
FauNDI	CATATG	1 cut(s)	1483
FbaI	TGATCA	1 cut(s)	1405
FblI	GTMKAC	2 cut(s)	456, 2083
Fnu4HI	GCNGC	9 cut(s)	97, 143, 668, 726, 1320, 1578, 1834, 2037, 2187
FokI	GGATG	8 cut(s)	490, 611, 781, 868, 1018, 1340, 1415, 1663
Fsp4HI	GCNGC	9 cut(s)	97, 143, 668, 726, 1320, 1578, 1834, 2037, 2187
FspBI	CTAG	5 cut(s)	264, 935, 1661, 2444, 3063
GluI	GCNGC	9 cut(s)	97, 143, 668, 726, 1320, 1578, 1834, 2037, 2187
GsaI	CCCAGC	1 cut(s)	1293
GsuI	CTGGAG	4 cut(s)	49, 261, 438, 1789
HaeIII	GGCC	2 cut(s)	122, 670
HapII	CCGG	4 cut(s)	119, 165, 186, 3042
HincII	GTYRAC	2 cut(s)	1024, 1546
HindII	GTYRAC	2 cut(s)	1024, 1546
HindIII	AAGCTT	3 cut(s)	849, 1907, 2481
HinfI	GANTC	7 cut(s)	1280, 1529, 2093, 2335, 2557, 2854, 2921
HpaII	CCGG	4 cut(s)	119, 165, 186, 3042
Hpy99I	CGWCG	2 cut(s)	134, 154
HpyAV	CCTTC	8 cut(s)	335, 505, 617, 1514, 1703, 2151, 2563, 2638
HpyCH4III	ACNGT	5 cut(s)	1079, 1155, 1303, 1311, 2833
HpyCH4IV	ACGT	4 cut(s)	376, 1969, 2080, 2758
HpyF10VI	GCNNNNNNNGC	8 cut(s)	151, 557, 1139, 1295, 1854, 1902, 2036, 2768
HpyF3I	CTNAG	9 cut(s)	208, 729, 1178, 1527, 1581, 2040, 2255, 2788, 2852
HpySE526I	ACGT	4 cut(s)	376, 1969, 2080, 2758
Ksp22I	TGATCA	1 cut(s)	1405
LguI	GCTCTTC	1 cut(s)	798
LmnI	GCTCC	6 cut(s)	7, 548, 1186, 1361, 2512, 2862
Lsp1109I	GCAGC	6 cut(s)	712, 1331, 1564, 1845, 2048, 2198
LweI	GCATC	9 cut(s)	692, 759, 1090, 1306, 1417, 2098, 2293, 2629, 2771
MabI	ACCWGGT	1 cut(s)	815
MaeI	CTAG	5 cut(s)	264, 935, 1661, 2444, 3063
MaeII	ACGT	4 cut(s)	376, 1969, 2080, 2758
MaeIII	GTNAC	6 cut(s)	290, 713, 858, 1147, 1281, 2457
MbiI	CCGCTC	1 cut(s)	145
MfeI	CAATTG	1 cut(s)	718
MflI	RGATCY	6 cut(s)	433, 1162, 1997, 2291, 2491, 3156
MhlI	GDGCHC	2 cut(s)	1089, 2523
MlyI	GAGTC	4 cut(s)	1289, 1538, 2087, 2863
MmeI	TCCRAC	1 cut(s)	1668
Mph1103I	ATGCAT	1 cut(s)	2548
MroXI	GAANNNNTTC	3 cut(s)	1370, 2328, 2925
MseI	TTAA	8 cut(s)	810, 1167, 1173, 1268, 1758, 1974, 2168, 2877
MslI	CAYNNNNRTG	3 cut(s)	896, 1092, 1244
MspA1I	CMGCKG	4 cut(s)	826, 1072, 1289, 1567
MspCI	CTTAAG	3 cut(s)	809, 1166, 1973
MspI	CCGG	4 cut(s)	119, 165, 186, 3042
MspR9I	CCNGG	6 cut(s)	165, 187, 417, 817, 1728, 3087
MunI	CAATTG	1 cut(s)	718
Mva1269I	GAATGC	1 cut(s)	241
MvaI	CCWGG	4 cut(s)	417, 817, 1728, 3087
MvnI	CGCG	1 cut(s)	99
MwoI	GCNNNNNNNGC	8 cut(s)	151, 557, 1139, 1295, 1854, 1902, 2036, 2768
NciI	CCSGG	2 cut(s)	165, 187
NcoI	CCATGG	2 cut(s)	897, 2893
NdeI	CATATG	1 cut(s)	1483
NheI	GCTAGC	1 cut(s)	1660
NlaIV	GGNNCC	4 cut(s)	9, 190, 1357, 3138
NmuCI	GTSAC	4 cut(s)	290, 858, 1147, 1281
NsiI	ATGCAT	1 cut(s)	2548
NspI	RCATGY	4 cut(s)	1298, 1726, 2546, 2817
NspV	TTCGAA	2 cut(s)	170, 621
OliI	CACNNNNGTG	1 cut(s)	1092
PaeI	GCATGC	2 cut(s)	1298, 2546
PaeR7I	CTCGAG	1 cut(s)	2607
PagI	TCATGA	2 cut(s)	844, 2563
PaqCI	CACCTGC	1 cut(s)	2218
PciSI	GCTCTTC	1 cut(s)	798
PctI	GAATGC	1 cut(s)	241
PdmI	GAANNNNTTC	3 cut(s)	1370, 2328, 2925
PfeI	GAWTC	3 cut(s)	2335, 2557, 2921
PfoI	TCCNGGA	1 cut(s)	415
PkrI	GCNGC	9 cut(s)	98, 144, 669, 727, 1321, 1579, 1835, 2038, 2188
PleI	GAGTC	4 cut(s)	1288, 1537, 2087, 2862
PpsI	GAGTC	4 cut(s)	1288, 1537, 2087, 2862
PpuMI	RGGWCCY	3 cut(s)	1523, 2152, 2213
PshAI	GACNNNNGTC	1 cut(s)	1016
PshBI	ATTAAT	1 cut(s)	2877
PsiI	TTATAA	2 cut(s)	320, 1212
Psp5II	RGGWCCY	3 cut(s)	1523, 2152, 2213
Psp6I	CCWGG	4 cut(s)	415, 815, 1726, 3085
PspFI	CCCAGC	1 cut(s)	1289
PspGI	CCWGG	4 cut(s)	415, 815, 1726, 3085
PspN4I	GGNNCC	4 cut(s)	9, 190, 1357, 3138
PspPI	GGNCC	7 cut(s)	178, 189, 467, 1523, 1921, 2152, 2213
PspPPI	RGGWCCY	3 cut(s)	1523, 2152, 2213
PsrI	GAACNNNNNNTAC	4 cut(s)	151, 183, 1119, 1151
PstI	CTGCAG	2 cut(s)	1018, 1135
PstNI	CAGNNNCTG	2 cut(s)	2155, 2338
PsuI	RGATCY	6 cut(s)	433, 1162, 1997, 2291, 2491, 3156
PvuII	CAGCTG	4 cut(s)	826, 1072, 1289, 1567
RsaI	GTAC	6 cut(s)	195, 606, 1076, 1308, 2982, 3046
RsaNI	GTAC	6 cut(s)	194, 605, 1075, 1307, 2981, 3045
RseI	CAYNNNNRTG	3 cut(s)	896, 1092, 1244
SapI	GCTCTTC	1 cut(s)	798
SaqAI	TTAA	8 cut(s)	810, 1167, 1173, 1268, 1758, 1974, 2168, 2877
SatI	GCNGC	9 cut(s)	97, 143, 668, 726, 1320, 1578, 1834, 2037, 2187
Sau96I	GGNCC	7 cut(s)	178, 189, 467, 1523, 1921, 2152, 2213
SchI	GAGTC	4 cut(s)	1289, 1538, 2087, 2863
ScrFI	CCNGG	6 cut(s)	165, 187, 417, 817, 1728, 3087
SduI	GDGCHC	2 cut(s)	1089, 2523
SexAI	ACCWGGT	1 cut(s)	815
SfaNI	GCATC	9 cut(s)	692, 759, 1090, 1306, 1417, 2098, 2293, 2629, 2771
SfcI	CTRYAG	5 cut(s)	563, 884, 1014, 1131, 1549
Sfr274I	CTCGAG	1 cut(s)	2607
SfuI	TTCGAA	2 cut(s)	170, 621
SinI	GGWCC	7 cut(s)	178, 189, 467, 1523, 1921, 2152, 2213
SlaI	CTCGAG	1 cut(s)	2607
SmiMI	CAYNNNNRTG	3 cut(s)	896, 1092, 1244
SmlI	CTYRAG	9 cut(s)	809, 1166, 1628, 1973, 2516, 2582, 2607, 2615, 2818
SmoI	CTYRAG	9 cut(s)	809, 1166, 1628, 1973, 2516, 2582, 2607, 2615, 2818
SpeI	ACTAGT	1 cut(s)	263
SphI	GCATGC	2 cut(s)	1298, 2546
SsiI	CCGC	7 cut(s)	5, 27, 94, 97, 143, 201, 667
SspI	AATATT	1 cut(s)	1064
SspMI	CTAG	5 cut(s)	264, 935, 1661, 2444, 3063
StyD4I	CCNGG	6 cut(s)	163, 185, 415, 815, 1726, 3085
StyI	CCWWGG	6 cut(s)	304, 897, 1323, 1557, 2097, 2893
TaaI	ACNGT	5 cut(s)	1079, 1155, 1303, 1311, 2833
TaiI	ACGT	4 cut(s)	379, 1972, 2083, 2761
TaqI	TCGA	8 cut(s)	170, 285, 621, 906, 2197, 2394, 2427, 2608
TatI	WGTACW	2 cut(s)	1074, 1306
TauI	GCSGC	3 cut(s)	99, 145, 670
TfiI	GAWTC	3 cut(s)	2335, 2557, 2921
Tru1I	TTAA	8 cut(s)	810, 1167, 1173, 1268, 1758, 1974, 2168, 2877
Tru9I	TTAA	8 cut(s)	810, 1167, 1173, 1268, 1758, 1974, 2168, 2877
TscAI	CASTG	4 cut(s)	91, 867, 1160, 1939
TseFI	GTSAC	4 cut(s)	290, 858, 1147, 1281
TseI	GCWGC	6 cut(s)	725, 1319, 1577, 1833, 2036, 2186
Tsp45I	GTSAC	4 cut(s)	290, 858, 1147, 1281
TspGWI	ACGGA	1 cut(s)	181
TspRI	CASTG	4 cut(s)	91, 867, 1160, 1939
Vha464I	CTTAAG	3 cut(s)	809, 1166, 1973
VneI	GTGCAC	1 cut(s)	1085
VpaK11BI	GGWCC	7 cut(s)	178, 189, 467, 1523, 1921, 2152, 2213
VspI	ATTAAT	1 cut(s)	2877
XapI	RAATTY	9 cut(s)	385, 654, 965, 1218, 1376, 1596, 1773, 2065, 2974
XceI	RCATGY	4 cut(s)	1298, 1726, 2546, 2817
XhoI	CTCGAG	1 cut(s)	2607
XmiI	GTMKAC	2 cut(s)	456, 2083
XmnI	GAANNNNTTC	3 cut(s)	1370, 2328, 2925
XspI	CTAG	5 cut(s)	264, 935, 1661, 2444, 3063
Zsp2I	ATGCAT	1 cut(s)	2548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.