Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0002382

Physical Location & Seq

Genomic Coordinates Reverse (-)

27774849 .. 27779371

Gene Structure 4523 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0285900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2682 bp

ATGAGACGATCGGTGATCTTCCTTCTCCTGTTTGCTCCCTTGATCGGCTGTTTCGTCAAGTCTGGTTCAGCCGAGGATACCTCCCTCGCCAATCCAGGTTCCGCCGGCGGCGCTCTTCAGCTCTTCAGCTCTCTTCTGCCTCCTGCACTTAGGAATGATGCAGCGCTTTTGGTCACATTGGATGGCAAGGTAGTTTCTGTGAACCCCAAGACGATGGAGATTGAGTGGGCCTTGTCCTCTGGTTCCCCAATTCACTCTTCCTATCAGAACGTCTCTTATTTCAACAACTGCAGGAGTGATGATGGTCACTCTTTCGTTGATATTGGTGAAGACTGGGCCCTCTATCGTCACAGCAACACCAACAAGAAGAAGAAGAAGAAGAAACTGTCGTCGAGTATTAGAGAATATGTCGCAAGTACTCCGCTAGTTTCTGAGGATGGAGGAGTCACATTGGGGTCAAAGATCACTAAAGTATTTGCTGTTAATGCTGTGACCGGACAAGTAATTCATAGTTTTAGGTTGGGTGATAATACTCCTTCAGCTACTTTAGGTATGGAACCCACCGGTGCCGAGGGCTTGGAAACATCTGGACTGGTGCTTTATCTCGAGAGAACAGATTACACACTGCAGCATTGTACAGTCAAGGGCGATCTTCTGTGGAAATTAGAAATTGCAGAGTTTGATGCTCATTTTCGATATCCTAAAATTGGAAATGGGCTTGGTCTAGAGGACAGGCTCATTGCTAACTCAACAGTGCCTTATCAGAAGGAGAAGCCTGTTGTCATTCGGGTTCCTTATCCTAGGTCGGTGGAATCTCGTTCTGTAATTGACGGTCTAACTGATGGGTATTATGGAGGCAAACCTCTCCCCATTGAAGGTCCTCATAACGATCTTCTGGCACTGCCTTTTGACAAAGGTGCTGTACCTCCTCACAACAATGAAGGCAGAGAAATGCTTGCTTTGCCCTCTCTTGAATTTGTGGACTCTAGGATCTTGGCTCTCCCTAGTAGAGATGTTGGTAAACTGGACATCACAAGCTCAGTGGCTGAATCTATTACTAACTTCCCCATACAATCTCTTTTTGTATTTCTTCTCACCCTATTATCCATTCTGGGATATATCTTTCGCTTTCTGACTGGAAAACAGCGTAAACTGAAAGTGGTGGCTGAGGAAACTAAAGCGCAAGCAGGAGCTCCCAAAAAGAAGAAAACTCGAAGATTGGGAAATAATAAGAAGAATTTCAGTTATGAGAAAGACGCAAGAAATATGTCGTATGAATATAAGTTTGGTGAATCTAATGGACCTGCACATGGGGAAAGAAATGAAACAAAATTGCTCTTGACCTCTTCTGATTTTATTGATCGTGACACTGAGGGACGTAGGATTGGCAAGTTACTTGTTTCCAGTAATGAAATTGCTAAGGGGAGTAACGGTACCATTGTACTTGAGGGTATCTATGATGGTCGTCCAGTAGCTGTTAAACGCCTTGTGCGAACTCATCATGATGTGGCTTCGAAAGAGATTCAGAATCTTATTGCGTCTGATCAGCATCCAAATATTGTCCGTTGGTATGGCGTGGAGCATGATCAAGATTTTGTCTATCTATCCTTGGAGCGCTGCTCATGTAGCTTAAATGACTTGATTTATTATTACTCAGAGTCTTCTCAAGGCCAAATTATCAACAAGGATGAGGATCCTCACTTTTTGGCCGAGTATCGCATTCAATTGCAGGCAATCATGGGAAAGAACAAGAATGTTGAATTGTGGAAGACAAATGGATACCCTTCACCCCAAATGTTAAAATTAATGAGTGATCTTGTTTCTGGACTTGCCCATTTGCATGAACTTGGAATTATACATCGGGATCTAAAGCCTCAGAATGTTTTGATAATCAAAGGCAGATCGTTATGTGCCAAGCTTTCAGATATGGGTATCAGCAAACGCCTTCAAGGGGACAGGTCTTCCATAACCCAGCATGCTACTGGTTATGGGAGTTCAGGTTGGCAAGCACCTGAACAACTTCTCCATCAGCGCCAAACACGTGCAGTAGATTTATTTAGTTTAGGTTGTCTCCTCTTTTTCTGTCTCACTGGGGGTAAACACCCTTATGGGGATAGTATTGAGCGTGATGTGAATATAGTGAATGATCGGAAAGACCTATTCTTGGTAGAGAATATACCAGAAGCAATGGATCTTTTTACTCGTCTCTTGGATCCCAACCCTGACATGAGGCCAACAGCTGTGGATTTGTTGCATCATCCCTTTTTCTGGAGTTCTGAGACGAGACTTTCATTTCTGCGCGATGCTAGTGATCGGGTTGAATTGGAGGATAGGGAGACTGCATCCCAACTCTTAAGTTCATTAGAAAGTACTGCAGCAGTTGCTCTAAATGGTAAGTGGGATGAAAAGATGGAACCTGCATTCCTCAATAACATTGGTCGCTACAGGCGTTACAAGTTTGACAGCATCCGTGACTTGCTGCGTGTAATAAGGAACAAGTTAAATCACTACAGAGAACTTCCCCAAGAGATCCAGGAATTATTGGGGACAGTTCCTGAGGGCTTCGACAGTTATTTTTCAAGTCGATTCCCTAAATTATTAATCAAGGTTTATAATGTGTTGTACAAGTACTGCAAAGAGGAGGAATTTTTTCGCAAGTATATACAAGGCAAATCGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin Malectin

Protein Analysis

893

Amino Acids

100.3

Weight (kDa)

8.28

Isoelectric Point (pI)

39.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	469 - 751	9.9e-27	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	470 - 756	3.8e-37	Protein kinase domain
Ribonuc_2-5A	PF06479	762 - 887	2.1e-46	Ribonuclease 2-5A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002382)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22610 AT2G22610 AT2G22610
fragaria_vesca	FvH4_1g19311 FvH4_1g19311 FvH4_1g19311 FvH4_1g19311 FvH4_1g19311 FvH4_5g34300 FvH4_5g34300
malus_domestica	MD08G1202900.v1.1 MD15G1388700.v1.1
prunus_persica	Prupe.1G535100_v2.0.a1 Prupe.6G205100_v2.0.a1 Prupe.6G205100_v2.0.a1 Prupe.6G205100_v2.0.a1 Prupe.6G205100_v2.0.a1 Prupe.6G205100_v2.0.a1 Prupe.6G205100_v2.0.a1
pyrus_communis	pycom08g17520 pycom15g34860
rosa_chinensis	RchiOBHm_Chr2g0110681 RchiOBHm_Chr7g0234871
rosa_laevigata	RLG00000001208 RLG00000017830
rosa_multiflora	Rmu_sc0000039.1_g000002 Rmu_sc0000389.1_g000040 Rmu_sc0040758.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133040 Rroxscaffold_3G00226690
rosa_rugosa	Rorug02G0168600 Rorug02G0168600 Rorug07G0285900
rosa_samantha	Rh2AG220900 Rh2BG231000 Rh2CG223300 Rh2DG227100 Rh7AG440500 Rh7BG413300 Rh7CG462200 Rh7DG430200
rosa_wichuraiana	Rw7G036620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2613
Acc36I	ACCTGC	2 cut(s)	1312, 2425
Acc65I	GGTACC	1 cut(s)	1433
AccB1I	GGYRCC	2 cut(s)	566, 1433
AccII	CGCG	1 cut(s)	2301
AciI	CCGC	3 cut(s)	102, 108, 422
AclWI	GGATC	8 cut(s)	998, 1688, 1701, 1872, 2199, 2207, 2220, 2524
AcoI	YGGCCR	1 cut(s)	1707
AcsI	RAATTY	3 cut(s)	974, 1237, 2645
AcuI	CTGAAG	3 cut(s)	101, 109, 522
AcvI	CACGTG	1 cut(s)	2042
AfaI	GTAC	8 cut(s)	418, 637, 924, 1435, 1443, 2371, 2624, 2630
AfeI	AGCGCT	2 cut(s)	165, 1616
AfiI	CCNNNNNNNGG	8 cut(s)	44, 707, 875, 1310, 1951, 2110, 2164, 2268
AflII	CTTAAG	1 cut(s)	2353
AflIII	ACRYGT	1 cut(s)	2039
AgeI	ACCGGT	1 cut(s)	563
AgsI	TTSAA	8 cut(s)	283, 875, 974, 1724, 1760, 1949, 2321, 2580
AjnI	CCWGG	2 cut(s)	94, 2532
AjuI	GAANNNNNNNTTGG	4 cut(s)	241, 273, 1269, 1301
AloI	GAACNNNNNNTCC	4 cut(s)	2007, 2039, 2406, 2438
AluBI	AGCT	9 cut(s)	121, 129, 542, 1038, 1193, 1475, 1629, 1918, 2240
AluI	AGCT	9 cut(s)	121, 129, 542, 1038, 1193, 1475, 1629, 1918, 2240
Alw21I	GWGCWC	1 cut(s)	1195
Alw26I	GTCTC	7 cut(s)	277, 2075, 2090, 2210, 2273, 2278, 2330
AlwI	GGATC	8 cut(s)	998, 1688, 1701, 1872, 2199, 2207, 2220, 2524
AlwNI	CAGNNNCTG	3 cut(s)	1046, 1475, 2555
Ama87I	CYCGRG	1 cut(s)	605
Aor51HI	AGCGCT	2 cut(s)	165, 1616
AoxI	GGCC	5 cut(s)	228, 336, 1669, 1707, 2231
ApaI	GGGCCC	1 cut(s)	340
ApeKI	GCWGC	5 cut(s)	161, 628, 1617, 2375, 2479
ApoI	RAATTY	3 cut(s)	974, 1237, 2645
AseI	ATTAAT	2 cut(s)	1805, 2600
AsiGI	ACCGGT	1 cut(s)	563
Asp700I	GAANNNNTTC	3 cut(s)	1238, 2019, 2649
Asp718I	GGTACC	1 cut(s)	1433
AspA2I	CCTAGG	1 cut(s)	800
AspLEI	GCGC	6 cut(s)	113, 166, 1183, 1617, 2034, 2301
AspS9I	GGNCC	5 cut(s)	228, 336, 337, 878, 1301
AsuHPI	GGTGA	6 cut(s)	25, 338, 536, 1087, 1301, 1779
AsuII	TTCGAA	1 cut(s)	1514
AvaI	CYCGRG	1 cut(s)	605
AvaII	GGWCC	2 cut(s)	878, 1301
AvrII	CCTAGG	1 cut(s)	800
AxyI	CCTNAGG	1 cut(s)	2556
BaeGI	GKGCMC	1 cut(s)	340
BaeI	ACNNNNGTAYC	2 cut(s)	1425, 1458
BamHI	GGATCC	2 cut(s)	1693, 2212
BanI	GGYRCC	2 cut(s)	566, 1433
BanII	GRGCYC	2 cut(s)	340, 1195
BbrPI	CACGTG	1 cut(s)	2042
BbsI	GAAGAC	4 cut(s)	336, 1653, 1775, 1953
Bbv12I	GWGCWC	1 cut(s)	1195
BbvCI	CCTCAGC	1 cut(s)	1167
BbvI	GCAGC	5 cut(s)	173, 640, 1604, 2387, 2466
BccI	CCATC	8 cut(s)	176, 208, 296, 431, 836, 1454, 2034, 2404
BciT130I	CCWGG	2 cut(s)	96, 2534
BciVI	GTATCC	2 cut(s)	70, 1772
BclI	TGATCA	2 cut(s)	1543, 1585
BcoDI	GTCTC	7 cut(s)	277, 2075, 2090, 2210, 2273, 2278, 2330
BfaI	CTAG	6 cut(s)	425, 725, 801, 987, 1005, 2307
BfmI	CTRYAG	5 cut(s)	289, 626, 2373, 2443, 2509
BfoI	RGCGCY	4 cut(s)	114, 167, 1618, 2035
BfrI	CTTAAG	1 cut(s)	2353
BfuAI	ACCTGC	2 cut(s)	1312, 2425
BfuI	GTATCC	2 cut(s)	70, 1772
BisI	GCNGC	6 cut(s)	109, 162, 629, 1618, 2376, 2480
BlnI	CCTAGG	1 cut(s)	800
BlsI	GCNGC	6 cut(s)	110, 163, 630, 1619, 2377, 2481
BmcAI	AGTACT	3 cut(s)	418, 2371, 2630
Bme1390I	CCNGG	2 cut(s)	96, 2534
Bme18I	GGWCC	2 cut(s)	878, 1301
BmeT110I	CYCGRG	1 cut(s)	605
BmgT120I	GGNCC	5 cut(s)	228, 336, 337, 878, 1301
BmrFI	CCNGG	2 cut(s)	96, 2534
BmrI	ACTGGG	2 cut(s)	343, 2100
BmsI	GCATC	7 cut(s)	148, 673, 1558, 2263, 2293, 2351, 2475
BmuI	ACTGGG	2 cut(s)	343, 2100
BpiI	GAAGAC	4 cut(s)	336, 1653, 1775, 1953
BplI	GAGNNNNNCTC	4 cut(s)	65, 97, 1604, 1636
BpmI	CTGGAG	1 cut(s)	2290
Bpu10I	CCTNAGC	2 cut(s)	1167, 1419
Bpu14I	TTCGAA	1 cut(s)	1514
BpuEI	CTTGAG	2 cut(s)	1466, 1650
BsaAI	YACGTR	1 cut(s)	2042
BsaBI	GATNNNNATC	2 cut(s)	1548, 1692
BsaJI	CCNNGG	4 cut(s)	72, 570, 800, 1608
BsaWI	WCCGGW	2 cut(s)	494, 563
BsaXI	ACNNNNNCTCC	8 cut(s)	209, 239, 1417, 1447, 1984, 2007, 2014, 2037
Bsc4I	CCNNNNNNNGG	8 cut(s)	44, 707, 875, 1310, 1951, 2110, 2164, 2268
Bse118I	RCCGGY	2 cut(s)	104, 563
Bse1I	ACTGG	8 cut(s)	338, 597, 1029, 1141, 1404, 1469, 1987, 2095
Bse21I	CCTNAGG	1 cut(s)	2556
Bse3DI	GCAATG	2 cut(s)	738, 2193
Bse8I	GATNNNNATC	2 cut(s)	1548, 1692
BseBI	CCWGG	2 cut(s)	96, 2534
BseDI	CCNNGG	4 cut(s)	72, 570, 800, 1608
BseGI	GGATG	8 cut(s)	187, 442, 1549, 1693, 2257, 2342, 2407, 2466
BseJI	GATNNNNATC	2 cut(s)	1548, 1692
BseLI	CCNNNNNNNGG	8 cut(s)	44, 707, 875, 1310, 1951, 2110, 2164, 2268
BseMI	GCAATG	2 cut(s)	738, 2193
BseMII	CTCAG	8 cut(s)	423, 1053, 1158, 1362, 1668, 1889, 2268, 2547
BseNI	ACTGG	8 cut(s)	338, 597, 1029, 1141, 1404, 1469, 1987, 2095
BseRI	GAGGAG	4 cut(s)	456, 918, 2063, 2654
BseSI	GKGCMC	1 cut(s)	340
BseXI	GCAGC	5 cut(s)	173, 640, 1604, 2387, 2466
BseYI	CCCAGC	1 cut(s)	1971
BsgI	GTGCAG	3 cut(s)	129, 1290, 2064
Bsh1236I	CGCG	1 cut(s)	2301
Bsh1285I	CGRYCG	1 cut(s)	11
BshFI	GGCC	5 cut(s)	230, 338, 1671, 1709, 2233
BshNI	GGYRCC	2 cut(s)	566, 1433
BshTI	ACCGGT	1 cut(s)	563
BsiEI	CGRYCG	1 cut(s)	11
BsiHKAI	GWGCWC	1 cut(s)	1195
BsiHKCI	CYCGRG	1 cut(s)	605
BsiSI	CCGG	3 cut(s)	105, 495, 564
BslFI	GGGAC	3 cut(s)	1389, 1967, 2560
BslI	CCNNNNNNNGG	8 cut(s)	44, 707, 875, 1310, 1951, 2110, 2164, 2268
BsmAI	GTCTC	7 cut(s)	277, 2075, 2090, 2210, 2273, 2278, 2330
BsmBI	CGTCTC	3 cut(s)	277, 2210, 2273
BsmFI	GGGAC	3 cut(s)	1389, 1967, 2560
BsmI	GAATGC	2 cut(s)	1719, 2420
BsnI	GGCC	5 cut(s)	230, 338, 1671, 1709, 2233
BsoBI	CYCGRG	1 cut(s)	605
Bsp119I	TTCGAA	1 cut(s)	1514
Bsp120I	GGGCCC	1 cut(s)	336
Bsp1286I	GDGCHC	2 cut(s)	340, 1195
Bsp1407I	TGTACA	2 cut(s)	635, 2622
BspACI	CCGC	3 cut(s)	102, 108, 422
BspANI	GGCC	5 cut(s)	230, 338, 1671, 1709, 2233
BspCNI	CTCAG	8 cut(s)	424, 1052, 1159, 1363, 1667, 1888, 2269, 2548
BspFNI	CGCG	1 cut(s)	2301
BspHI	TCATGA	1 cut(s)	1501
BspMAI	CTGCAG	3 cut(s)	293, 630, 2377
BspMI	ACCTGC	2 cut(s)	1312, 2425
BspPI	GGATC	8 cut(s)	998, 1688, 1701, 1872, 2199, 2207, 2220, 2524
BspQI	GCTCTTC	2 cut(s)	120, 128
BspT104I	TTCGAA	1 cut(s)	1514
BspT107I	GGYRCC	2 cut(s)	566, 1433
BspTI	CTTAAG	1 cut(s)	2353
BsrDI	GCAATG	2 cut(s)	738, 2193
BsrFI	RCCGGY	2 cut(s)	104, 563
BsrGI	TGTACA	2 cut(s)	635, 2622
BsrI	ACTGG	8 cut(s)	338, 597, 1029, 1141, 1404, 1469, 1987, 2095
BssAI	RCCGGY	2 cut(s)	104, 563
BssECI	CCNNGG	4 cut(s)	72, 570, 800, 1608
BssT1I	CCWWGG	2 cut(s)	800, 1608
Bst2UI	CCWGG	2 cut(s)	96, 2534
Bst4CI	ACNGT	7 cut(s)	387, 640, 754, 833, 1433, 2551, 2570
Bst6I	CTCTTC	5 cut(s)	120, 128, 138, 262, 1351
BstAFI	CTTAAG	1 cut(s)	2353
BstAPI	GCANNNNNTGC	1 cut(s)	2381
BstAUI	TGTACA	2 cut(s)	635, 2622
BstBAI	YACGTR	1 cut(s)	2042
BstBI	TTCGAA	1 cut(s)	1514
BstC8I	GCNNGC	6 cut(s)	106, 957, 1185, 1731, 1977, 2007
BstF5I	GGATG	8 cut(s)	187, 442, 1549, 1693, 2257, 2342, 2407, 2466
BstFNI	CGCG	1 cut(s)	2301
BstH2I	RGCGCY	4 cut(s)	114, 167, 1618, 2035
BstHHI	GCGC	6 cut(s)	113, 166, 1183, 1617, 2034, 2301
BstMAI	GTCTC	7 cut(s)	277, 2075, 2090, 2210, 2273, 2278, 2330
BstMCI	CGRYCG	1 cut(s)	11
BstMWI	GCNNNNNNNGC	5 cut(s)	110, 485, 961, 1626, 2381
BstNI	CCWGG	2 cut(s)	96, 2534
BstNSI	RCATGY	1 cut(s)	1979
BstSCI	CCNGG	2 cut(s)	94, 2532
BstSFI	CTRYAG	5 cut(s)	289, 626, 2373, 2443, 2509
BstSLI	GKGCMC	1 cut(s)	340
BstUI	CGCG	1 cut(s)	2301
BstV1I	GCAGC	5 cut(s)	173, 640, 1604, 2387, 2466
BstV2I	GAAGAC	4 cut(s)	336, 1653, 1775, 1953
BstX2I	RGATCY	6 cut(s)	990, 1693, 1864, 2191, 2212, 2529
BstXI	CCANNNNNNTGG	1 cut(s)	214
BstYI	RGATCY	6 cut(s)	990, 1693, 1864, 2191, 2212, 2529
Bsu36I	CCTNAGG	1 cut(s)	2556
BsuI	GTATCC	2 cut(s)	70, 1772
BsuRI	GGCC	5 cut(s)	230, 338, 1671, 1709, 2233
BtgZI	GCGATG	1 cut(s)	2316
BtsCI	GGATG	8 cut(s)	187, 442, 1549, 1693, 2257, 2342, 2407, 2466
BtsI	GCAGTG	2 cut(s)	623, 899
BtsIMutI	CAGTG	6 cut(s)	623, 759, 899, 1047, 1368, 2088
BveI	ACCTGC	2 cut(s)	1312, 2425
Cac8I	GCNNGC	6 cut(s)	106, 957, 1185, 1731, 1977, 2007
CaiI	CAGNNNCTG	3 cut(s)	1046, 1475, 2555
CciI	TCATGA	1 cut(s)	1501
CfoI	GCGC	6 cut(s)	113, 166, 1183, 1617, 2034, 2301
Cfr10I	RCCGGY	2 cut(s)	104, 563
Cfr13I	GGNCC	5 cut(s)	228, 336, 337, 878, 1301
CseI	GACGC	2 cut(s)	1265, 1527
Csp6I	GTAC	8 cut(s)	417, 636, 923, 1434, 1442, 2370, 2623, 2629
CspAI	ACCGGT	1 cut(s)	563
CspCI	CAANNNNNGTGG	4 cut(s)	1023, 1058, 2223, 2258
CviAII	CATG	8 cut(s)	1310, 1502, 1583, 1623, 1738, 1841, 1976, 2227
CviQI	GTAC	8 cut(s)	417, 636, 923, 1434, 1442, 2370, 2623, 2629
EaeI	YGGCCR	1 cut(s)	1707
Eam1104I	CTCTTC	5 cut(s)	120, 128, 138, 262, 1351
EarI	CTCTTC	5 cut(s)	120, 128, 138, 262, 1351
EciI	GGCGGA	1 cut(s)	91
Ecl136II	GAGCTC	1 cut(s)	1193
Eco130I	CCWWGG	2 cut(s)	800, 1608
Eco24I	GRGCYC	2 cut(s)	340, 1195
Eco32I	GATATC	1 cut(s)	698
Eco47I	GGWCC	2 cut(s)	878, 1301
Eco47III	AGCGCT	2 cut(s)	165, 1616
Eco53kI	GAGCTC	1 cut(s)	1193
Eco57I	CTGAAG	3 cut(s)	101, 109, 522
Eco72I	CACGTG	1 cut(s)	2042
Eco81I	CCTNAGG	1 cut(s)	2556
Eco88I	CYCGRG	1 cut(s)	605
EcoICRI	GAGCTC	1 cut(s)	1193
EcoO109I	RGGNCCY	2 cut(s)	337, 878
EcoRII	CCWGG	2 cut(s)	94, 2532
EcoRV	GATATC	1 cut(s)	698
EcoT14I	CCWWGG	2 cut(s)	800, 1608
EcoT38I	GRGCYC	2 cut(s)	340, 1195
ErhI	CCWWGG	2 cut(s)	800, 1608
Esp3I	CGTCTC	3 cut(s)	277, 2210, 2273
FaeI	CATG	8 cut(s)	1313, 1505, 1586, 1626, 1741, 1844, 1979, 2230
FaqI	GGGAC	3 cut(s)	1389, 1967, 2560
FatI	CATG	8 cut(s)	1309, 1501, 1582, 1622, 1737, 1840, 1975, 2226
FbaI	TGATCA	2 cut(s)	1543, 1585
Fnu4HI	GCNGC	6 cut(s)	109, 162, 629, 1618, 2376, 2480
FokI	GGATG	8 cut(s)	194, 449, 1536, 1700, 2244, 2329, 2414, 2453
FriOI	GRGCYC	2 cut(s)	340, 1195
Fsp4HI	GCNGC	6 cut(s)	109, 162, 629, 1618, 2376, 2480
FspBI	CTAG	6 cut(s)	425, 725, 801, 987, 1005, 2307
GlaI	GCGC	6 cut(s)	112, 165, 1182, 1616, 2033, 2300
GluI	GCNGC	6 cut(s)	109, 162, 629, 1618, 2376, 2480
GsaI	CCCAGC	1 cut(s)	1975
GsuI	CTGGAG	1 cut(s)	2290
HaeII	RGCGCY	4 cut(s)	114, 167, 1618, 2035
HaeIII	GGCC	5 cut(s)	230, 338, 1671, 1709, 2233
HapII	CCGG	3 cut(s)	105, 495, 564
HgaI	GACGC	2 cut(s)	1265, 1527
HhaI	GCGC	6 cut(s)	113, 166, 1183, 1617, 2034, 2301
Hin1II	CATG	8 cut(s)	1313, 1505, 1586, 1626, 1741, 1844, 1979, 2230
Hin6I	GCGC	6 cut(s)	111, 164, 1181, 1615, 2032, 2299
HinP1I	GCGC	6 cut(s)	111, 164, 1181, 1615, 2032, 2299
HindIII	AAGCTT	1 cut(s)	1916
HinfI	GANTC	9 cut(s)	444, 812, 983, 1049, 1292, 1522, 1528, 1658, 2586
HpaII	CCGG	3 cut(s)	105, 495, 564
HphI	GGTGA	6 cut(s)	25, 338, 536, 1087, 1301, 1779
Hpy166II	GTNNAC	5 cut(s)	202, 982, 1022, 1151, 2099
Hpy8I	GTNNAC	5 cut(s)	202, 982, 1022, 1151, 2099
Hpy99I	CGWCG	1 cut(s)	394
HpyAV	CCTTC	7 cut(s)	32, 546, 760, 869, 935, 1794, 1955
HpyCH4III	ACNGT	7 cut(s)	387, 640, 754, 833, 1433, 2551, 2570
HpyCH4IV	ACGT	3 cut(s)	270, 1378, 2041
HpyF10VI	GCNNNNNNNGC	5 cut(s)	110, 485, 961, 1626, 2381
HpySE526I	ACGT	3 cut(s)	270, 1378, 2041
Hsp92II	CATG	8 cut(s)	1313, 1505, 1586, 1626, 1741, 1844, 1979, 2230
HspAI	GCGC	6 cut(s)	111, 164, 1181, 1615, 2032, 2299
KpnI	GGTACC	1 cut(s)	1437
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Ksp22I	TGATCA	2 cut(s)	1543, 1585
LguI	GCTCTTC	2 cut(s)	120, 128
LmnI	GCTCC	5 cut(s)	40, 1190, 1198, 1579, 1612
Lsp1109I	GCAGC	5 cut(s)	173, 640, 1604, 2387, 2466
LweI	GCATC	7 cut(s)	148, 673, 1558, 2263, 2293, 2351, 2475
MaeI	CTAG	6 cut(s)	425, 725, 801, 987, 1005, 2307
MaeII	ACGT	3 cut(s)	270, 1378, 2041
MfeI	CAATTG	1 cut(s)	1724
MflI	RGATCY	6 cut(s)	990, 1693, 1864, 2191, 2212, 2529
MhlI	GDGCHC	2 cut(s)	340, 1195
MlyI	GAGTC	3 cut(s)	453, 977, 1667
MreI	CGCCGGCG	1 cut(s)	104
MroNI	GCCGGC	1 cut(s)	104
MroXI	GAANNNNTTC	3 cut(s)	1238, 2019, 2649
MseI	TTAA	8 cut(s)	483, 1479, 1631, 1799, 1805, 2354, 2501, 2600
MslI	CAYNNNNRTG	4 cut(s)	936, 1503, 1839, 2106
MspA1I	CMGCKG	1 cut(s)	2240
MspCI	CTTAAG	1 cut(s)	2353
MspI	CCGG	3 cut(s)	105, 495, 564
MspR9I	CCNGG	2 cut(s)	96, 2534
MunI	CAATTG	1 cut(s)	1724
Mva1269I	GAATGC	2 cut(s)	1719, 2420
MvaI	CCWGG	2 cut(s)	96, 2534
MvnI	CGCG	1 cut(s)	2301
MwoI	GCNNNNNNNGC	5 cut(s)	110, 485, 961, 1626, 2381
NaeI	GCCGGC	1 cut(s)	106
NgoMIV	GCCGGC	1 cut(s)	104
NlaIII	CATG	8 cut(s)	1313, 1505, 1586, 1626, 1741, 1844, 1979, 2230
NmeAIII	GCCGAG	3 cut(s)	97, 595, 1735
NmuCI	GTSAC	7 cut(s)	172, 305, 347, 445, 490, 1364, 2471
NspI	RCATGY	1 cut(s)	1979
NspV	TTCGAA	1 cut(s)	1514
PaeI	GCATGC	1 cut(s)	1979
PaeR7I	CTCGAG	1 cut(s)	605
PagI	TCATGA	1 cut(s)	1501
PciSI	GCTCTTC	2 cut(s)	120, 128
PcsI	WCGNNNNNNNCGW	3 cut(s)	51, 1489, 2446
PctI	GAATGC	2 cut(s)	1719, 2420
PdiI	GCCGGC	1 cut(s)	106
PdmI	GAANNNNTTC	3 cut(s)	1238, 2019, 2649
PfeI	GAWTC	6 cut(s)	812, 1049, 1292, 1522, 1528, 2586
PfoI	TCCNGGA	1 cut(s)	2532
PinAI	ACCGGT	1 cut(s)	563
PkrI	GCNGC	6 cut(s)	110, 163, 630, 1619, 2377, 2481
Ple19I	CGATCG	1 cut(s)	11
PleI	GAGTC	3 cut(s)	452, 977, 1666
PmaCI	CACGTG	1 cut(s)	2042
PmlI	CACGTG	1 cut(s)	2042
PpsI	GAGTC	3 cut(s)	452, 977, 1666
Ppu21I	YACGTR	1 cut(s)	2042
PpuMI	RGGWCCY	1 cut(s)	878
PshBI	ATTAAT	2 cut(s)	1805, 2600
PsiI	TTATAA	1 cut(s)	2613
Psp124BI	GAGCTC	1 cut(s)	1195
Psp5II	RGGWCCY	1 cut(s)	878
Psp6I	CCWGG	2 cut(s)	94, 2532
PspCI	CACGTG	1 cut(s)	2042
PspFI	CCCAGC	1 cut(s)	1971
PspGI	CCWGG	2 cut(s)	94, 2532
PspOMI	GGGCCC	1 cut(s)	336
PspPI	GGNCC	5 cut(s)	228, 336, 337, 878, 1301
PspPPI	RGGWCCY	1 cut(s)	878
PstI	CTGCAG	3 cut(s)	293, 630, 2377
PstNI	CAGNNNCTG	3 cut(s)	1046, 1475, 2555
PsuI	RGATCY	6 cut(s)	990, 1693, 1864, 2191, 2212, 2529
PvuI	CGATCG	1 cut(s)	11
PvuII	CAGCTG	1 cut(s)	2240
RsaI	GTAC	8 cut(s)	418, 637, 924, 1435, 1443, 2371, 2624, 2630
RsaNI	GTAC	8 cut(s)	417, 636, 923, 1434, 1442, 2370, 2623, 2629
RseI	CAYNNNNRTG	4 cut(s)	936, 1503, 1839, 2106
SacI	GAGCTC	1 cut(s)	1195
SapI	GCTCTTC	2 cut(s)	120, 128
SaqAI	TTAA	8 cut(s)	483, 1479, 1631, 1799, 1805, 2354, 2501, 2600
SatI	GCNGC	6 cut(s)	109, 162, 629, 1618, 2376, 2480
Sau96I	GGNCC	5 cut(s)	228, 336, 337, 878, 1301
ScaI	AGTACT	3 cut(s)	418, 2371, 2630
SchI	GAGTC	3 cut(s)	453, 977, 1667
ScrFI	CCNGG	2 cut(s)	96, 2534
SduI	GDGCHC	2 cut(s)	340, 1195
SfaNI	GCATC	7 cut(s)	148, 673, 1558, 2263, 2293, 2351, 2475
SfcI	CTRYAG	5 cut(s)	289, 626, 2373, 2443, 2509
Sfr274I	CTCGAG	1 cut(s)	605
SfuI	TTCGAA	1 cut(s)	1514
SgrAI	CRCCGGYG	2 cut(s)	104, 563
SinI	GGWCC	2 cut(s)	878, 1301
SlaI	CTCGAG	1 cut(s)	605
SmiMI	CAYNNNNRTG	4 cut(s)	936, 1503, 1839, 2106
SmlI	CTYRAG	4 cut(s)	605, 1445, 1665, 2353
SmoI	CTYRAG	4 cut(s)	605, 1445, 1665, 2353
SphI	GCATGC	1 cut(s)	1979
SsiI	CCGC	3 cut(s)	102, 108, 422
SspI	AATATT	1 cut(s)	1558
SspMI	CTAG	6 cut(s)	425, 725, 801, 987, 1005, 2307
SstI	GAGCTC	1 cut(s)	1195
StyD4I	CCNGG	2 cut(s)	94, 2532
StyI	CCWWGG	2 cut(s)	800, 1608
TaaI	ACNGT	7 cut(s)	387, 640, 754, 833, 1433, 2551, 2570
TaiI	ACGT	3 cut(s)	273, 1381, 2044
TaqI	TCGA	7 cut(s)	392, 606, 694, 1213, 1514, 2565, 2584
TatI	WGTACW	6 cut(s)	416, 635, 1441, 2369, 2622, 2628
TauI	GCSGC	1 cut(s)	111
TfiI	GAWTC	6 cut(s)	812, 1049, 1292, 1522, 1528, 2586
Tru1I	TTAA	8 cut(s)	483, 1479, 1631, 1799, 1805, 2354, 2501, 2600
Tru9I	TTAA	8 cut(s)	483, 1479, 1631, 1799, 1805, 2354, 2501, 2600
TscAI	CASTG	6 cut(s)	630, 759, 906, 1047, 1375, 2095
TseFI	GTSAC	7 cut(s)	172, 305, 347, 445, 490, 1364, 2471
TseI	GCWGC	5 cut(s)	161, 628, 1617, 2375, 2479
Tsp45I	GTSAC	7 cut(s)	172, 305, 347, 445, 490, 1364, 2471
TspDTI	ATGAA	9 cut(s)	497, 954, 1290, 1338, 1425, 1857, 2280, 2349, 2418
TspGWI	ACGGA	2 cut(s)	1553, 2459
TspRI	CASTG	6 cut(s)	630, 759, 906, 1047, 1375, 2095
Vha464I	CTTAAG	1 cut(s)	2353
VpaK11BI	GGWCC	2 cut(s)	878, 1301
VspI	ATTAAT	2 cut(s)	1805, 2600
XapI	RAATTY	3 cut(s)	974, 1237, 2645
XbaI	TCTAGA	1 cut(s)	724
XceI	RCATGY	1 cut(s)	1979
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1979
XhoI	CTCGAG	1 cut(s)	605
XmaJI	CCTAGG	1 cut(s)	800
XmnI	GAANNNNTTC	3 cut(s)	1238, 2019, 2649
XspI	CTAG	6 cut(s)	425, 725, 801, 987, 1005, 2307
ZrmI	AGTACT	3 cut(s)	418, 2371, 2630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.