FvH4_6g01150

Mediates both low-affinity uptake and efflux of sugar across the membrane

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
625207 .. 626799
1593 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g01150.t1

Sequence Viewer

Length: 774 bp
ATGGCGTATTCGACTACTGAGCAACTCGCTTTCTCATTCGGTTTGTTAGGTAACATTGTGTCATTCATGGTGTTCTTGGCACCAATGCCAACATTTTACAGAATTTACAAGAAGAAATCATCAGAAGGGTTCCAATCCATACCATATGTGGTTGCGCTTTTGAGTGCAATGTTGTTGTTGTATTATGGTGTGATCAAGACAAATGCTATCTTGATCATCAGCATCAATGCCTTTGGAATCGTTATCGAAGTTGCTTACCTCATATTCTATCTCACATATGCTCCCAAGAAGCAGAGGATTTTTACGCTGAACTTGATTCTGCTGGTCAATGTAGCGTTTGGGTTGACGTTGGCAGCCACTATCTTCCTTCTAAGTGGAACCAAACGCGTCGCCGCAGTTGGATGGATCTGTGCTGTGTTTAACATTGCTGTTTTTGCGGCTCCTTTAAGCATTATGAGGGAAGTAATAAGAACCAAAAGTGTGGAATTCATGCCATTTGGTTTGTCCTTATTCCTCACACTTTGTGCTACCACTTGGTTCTTCTACGGACTTTTCACAAAGGATTACTACATTGCATTACCAAACGTACTGGGATTCCTATTCGGCATCGCACAAATGATCCTATATATGGTATACAGGAACTCAGGGAAAGATCATGATGAGGTTGAAGCAAAAACACGAACTAATGGTGATGATCTAGAGATGAGGTATAAGGTAATAAGTAAAAGTAAAACTACCAACCATAACAAACTGTATCGCAGTGTCAGTACGTGA

Protein Analysis

258

Amino Acids

28.99

Weight (kDa)

9.57

Isoelectric Point (pI)

33.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MtN3_slv PF03083 12 - 97 9.5e-25 Sugar efflux transporter for intercellular exchange
MtN3_slv PF03083 133 - 215 5.4e-29 Sugar efflux transporter for intercellular exchange
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0018738)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 79
AccI GTMKAC 1 cut(s) 633
AccII CGCG 1 cut(s) 387
AciI CCGC 2 cut(s) 393, 437
AclWI GGATC 2 cut(s) 413, 613
AcsI RAATTY 2 cut(s) 102, 485
AdeI CACNNNGTG 1 cut(s) 524
AfaI GTAC 2 cut(s) 588, 769
AfiI CCNNNNNNNGG 1 cut(s) 628
AflIII ACRYGT 1 cut(s) 385
AgsI TTSAA 1 cut(s) 668
AlwI GGATC 2 cut(s) 413, 613
ApeKI GCWGC 1 cut(s) 353
ApoI RAATTY 2 cut(s) 102, 485
AspLEI GCGC 1 cut(s) 157
AsuHPI GGTGA 1 cut(s) 701
BanI GGYRCC 1 cut(s) 79
BbvI GCAGC 1 cut(s) 365
BccI CCATC 1 cut(s) 396
BclI TGATCA 2 cut(s) 192, 213
BfaI CTAG 1 cut(s) 698
BisI GCNGC 3 cut(s) 354, 393, 438
BlsI GCNGC 3 cut(s) 355, 394, 439
BmiI GGNNCC 4 cut(s) 81, 131, 379, 441
BmrI ACTGGG 1 cut(s) 599
BmsI GCATC 2 cut(s) 231, 615
BmuI ACTGGG 1 cut(s) 599
BsaAI YACGTR 1 cut(s) 771
BsaXI ACNNNNNCTCC 2 cut(s) 265, 295
Bsc4I CCNNNNNNNGG 1 cut(s) 628
Bse1I ACTGG 1 cut(s) 594
Bse3DI GCAATG 3 cut(s) 174, 423, 570
BseGI GGATG 1 cut(s) 407
BseLI CCNNNNNNNGG 1 cut(s) 628
BseMI GCAATG 3 cut(s) 174, 423, 570
BseMII CTCAG 2 cut(s) 9, 657
BseNI ACTGG 1 cut(s) 594
BseXI GCAGC 1 cut(s) 365
Bsh1236I CGCG 1 cut(s) 387
BshNI GGYRCC 1 cut(s) 79
BslI CCNNNNNNNGG 1 cut(s) 628
Bsp143I GATC 6 cut(s) 192, 213, 405, 618, 652, 694
BspACI CCGC 2 cut(s) 393, 437
BspCNI CTCAG 2 cut(s) 10, 656
BspFNI CGCG 1 cut(s) 387
BspHI TCATGA 1 cut(s) 655
BspLI GGNNCC 4 cut(s) 81, 131, 379, 441
BspPI GGATC 2 cut(s) 413, 613
BspT107I GGYRCC 1 cut(s) 79
BsrDI GCAATG 3 cut(s) 174, 423, 570
BsrI ACTGG 1 cut(s) 594
BssMI GATC 6 cut(s) 192, 213, 405, 618, 652, 694
BssNAI GTATAC 1 cut(s) 634
Bst1107I GTATAC 1 cut(s) 634
Bst4CI ACNGT 1 cut(s) 753
BstBAI YACGTR 1 cut(s) 771
BstDEI CTNAG 3 cut(s) 18, 371, 643
BstF5I GGATG 1 cut(s) 407
BstFNI CGCG 1 cut(s) 387
BstHHI GCGC 1 cut(s) 157
BstKTI GATC 6 cut(s) 195, 216, 408, 621, 655, 697
BstMBI GATC 6 cut(s) 192, 213, 405, 618, 652, 694
BstMWI GCNNNNNNNGC 1 cut(s) 434
BstUI CGCG 1 cut(s) 387
BstV1I GCAGC 1 cut(s) 365
BstX2I RGATCY 1 cut(s) 405
BstXI CCANNNNNNTGG 1 cut(s) 481
BstYI RGATCY 1 cut(s) 405
BstZ17I GTATAC 1 cut(s) 634
BtgZI GCGATG 1 cut(s) 592
BtsCI GGATG 1 cut(s) 407
BtsI GCAGTG 1 cut(s) 766
BtsIMutI CAGTG 1 cut(s) 766
CciI TCATGA 1 cut(s) 655
CfoI GCGC 1 cut(s) 157
CseI GACGC 1 cut(s) 376
Csp6I GTAC 2 cut(s) 587, 768
CviAII CATG 3 cut(s) 67, 490, 656
CviJI RGCY 2 cut(s) 356, 440
CviKI_1 RGCY 2 cut(s) 356, 440
CviQI GTAC 2 cut(s) 587, 768
DdeI CTNAG 3 cut(s) 18, 371, 643
DpnI GATC 6 cut(s) 194, 215, 407, 620, 654, 696
DpnII GATC 6 cut(s) 192, 213, 405, 618, 652, 694
DraIII CACNNNGTG 1 cut(s) 524
EcoRI GAATTC 1 cut(s) 485
FaeI CATG 3 cut(s) 70, 493, 659
FatI CATG 3 cut(s) 66, 489, 655
FauNDI CATATG 2 cut(s) 145, 277
FbaI TGATCA 2 cut(s) 192, 213
FblI GTMKAC 1 cut(s) 633
Fnu4HI GCNGC 3 cut(s) 354, 393, 438
FokI GGATG 1 cut(s) 414
Fsp4HI GCNGC 3 cut(s) 354, 393, 438
FspBI CTAG 1 cut(s) 698
GlaI GCGC 1 cut(s) 156
GluI GCNGC 3 cut(s) 354, 393, 438
HgaI GACGC 1 cut(s) 376
HhaI GCGC 1 cut(s) 157
Hin1II CATG 3 cut(s) 70, 493, 659
Hin6I GCGC 1 cut(s) 155
HinP1I GCGC 1 cut(s) 155
HincII GTYRAC 1 cut(s) 345
HindII GTYRAC 1 cut(s) 345
HinfI GANTC 3 cut(s) 237, 316, 594
HphI GGTGA 1 cut(s) 701
Hpy166II GTNNAC 2 cut(s) 345, 634
Hpy188I TCNGA 1 cut(s) 124
Hpy188III TCNNGA 4 cut(s) 196, 211, 656, 698
Hpy8I GTNNAC 2 cut(s) 345, 634
Hpy99I CGWCG 1 cut(s) 392
HpyAV CCTTC 2 cut(s) 119, 377
HpyCH4III ACNGT 1 cut(s) 753
HpyCH4IV ACGT 3 cut(s) 347, 585, 770
HpyCH4V TGCA 2 cut(s) 167, 575
HpyF10VI GCNNNNNNNGC 1 cut(s) 434
HpyF3I CTNAG 3 cut(s) 18, 371, 643
HpySE526I ACGT 3 cut(s) 347, 585, 770
Hsp92II CATG 3 cut(s) 70, 493, 659
HspAI GCGC 1 cut(s) 155
Ksp22I TGATCA 2 cut(s) 192, 213
Kzo9I GATC 6 cut(s) 192, 213, 405, 618, 652, 694
LmnI GCTCC 2 cut(s) 286, 445
LpnPI CCDG 4 cut(s) 308, 575, 622, 630
Lsp1109I GCAGC 1 cut(s) 365
LweI GCATC 2 cut(s) 231, 615
MaeI CTAG 1 cut(s) 698
MaeII ACGT 3 cut(s) 347, 585, 770
MaeIII GTNAC 1 cut(s) 50
MalI GATC 6 cut(s) 194, 215, 407, 620, 654, 696
MboI GATC 6 cut(s) 192, 213, 405, 618, 652, 694
MboII GAAGA 3 cut(s) 124, 355, 532
MflI RGATCY 1 cut(s) 405
MluCI AATT 2 cut(s) 102, 485
MluI ACGCGT 1 cut(s) 385
MmeI TCCRAC 1 cut(s) 379
MnlI CCTC 6 cut(s) 269, 288, 450, 524, 655, 699
MseI TTAA 2 cut(s) 420, 446
MvnI CGCG 1 cut(s) 387
MwoI GCNNNNNNNGC 1 cut(s) 434
NdeI CATATG 2 cut(s) 145, 277
NdeII GATC 6 cut(s) 192, 213, 405, 618, 652, 694
NlaIII CATG 3 cut(s) 70, 493, 659
NlaIV GGNNCC 4 cut(s) 81, 131, 379, 441
PagI TCATGA 1 cut(s) 655
PfeI GAWTC 3 cut(s) 237, 316, 594
PkrI GCNGC 3 cut(s) 355, 394, 439
Ppu21I YACGTR 1 cut(s) 771
PspN4I GGNNCC 4 cut(s) 81, 131, 379, 441
PsuI RGATCY 1 cut(s) 405
RsaI GTAC 2 cut(s) 588, 769
RsaNI GTAC 2 cut(s) 587, 768
SaqAI TTAA 2 cut(s) 420, 446
SatI GCNGC 3 cut(s) 354, 393, 438
Sau3AI GATC 6 cut(s) 192, 213, 405, 618, 652, 694
SetI ASST 8 cut(s) 52, 261, 350, 588, 666, 710, 717, 773
SfaNI GCATC 2 cut(s) 231, 615
Sse9I AATT 2 cut(s) 102, 485
SsiI CCGC 2 cut(s) 393, 437
SspMI CTAG 1 cut(s) 698
TaaI ACNGT 1 cut(s) 753
TaiI ACGT 3 cut(s) 350, 588, 773
TaqI TCGA 2 cut(s) 11, 246
TasI AATT 2 cut(s) 102, 485
TauI GCSGC 2 cut(s) 395, 440
TfiI GAWTC 3 cut(s) 237, 316, 594
Tru1I TTAA 2 cut(s) 420, 446
Tru9I TTAA 2 cut(s) 420, 446
TscAI CASTG 1 cut(s) 766
TseI GCWGC 1 cut(s) 353
TspDTI ATGAA 2 cut(s) 55, 478
TspGWI ACGGA 1 cut(s) 561
TspRI CASTG 1 cut(s) 766
XapI RAATTY 2 cut(s) 102, 485
XbaI TCTAGA 1 cut(s) 697
XcmI CCANNNNNNNNNTGG 1 cut(s) 145
XmiI GTMKAC 1 cut(s) 633
XspI CTAG 1 cut(s) 698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.