FvH4_6g06880

protein UNUSUAL FLORAL

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
4151827 .. 4155139
3313 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g06880.t2

Sequence Viewer

Length: 1266 bp
ATGCATCTTGGATTTAAGAAAATGAAAACGAGCAGTACCTACGCTGGCAGTAGCAGCAGTGGACCTAATCATGATGAGCCATGGATGGACCCTAGGATCTGGAGGAAGCTCCCAACTCGGATTATCGACCGCATTATCGCCTTTCTCCCACCGCCAGCCTTCTTCCGATCTCGATGTGTCTGTAGGAGATGGAACAGCCTCTTGTTCACCAACACCTTCCTTCAACTCTACTTCGATATCTTCCCACACTGTCGCCATTGGTTCCTCTTCTTCAAGGCCCAGAATCTCTTTAGTGACAACAGCAACAATAGGGCTGAAGGGTACCTTTTCGATACTTATGAACTCGTATGGTACCGTCTTCCCTTTCCTTTGGTTCCACCGTCTGGCTTCTCTCCAGCTGCTTCTTCAGGCGGTCTGGTCTGTTGGATTTCGGATGACCCTGCTCCGAAAACCCTACTTATCTCCAACCCACTTGCTCGTACCCTAAACTATCTCCCTACAACCCTAACCCCAAGGTACCAACCCTCCATCGGCTTCACTGTCACGTCTACTTCCATAGACGTCACCCTTGCCGGAGATGACCTCATCAACAATGCCCAAGCGGTGAAGAACTCCACCGCAGAAAGGTTCCACGTCGACGGTACGGGCTGCTTTCTCCCCACATGGCAAATCACATCTCGTCTTCCCAGACTCTGCAACTTTGACTCGGCTGGTAGAATGGTGCATGTTAACGGAAGGCTTTACAACATGAGCTTCCATCCTTTCAACGTCGCGGCCTATGACGTGGAAGCAGCCGTTTGGTGGGACATCCAGCCACCGATGAAGAGGTTCCTGAAGTTCCCGAGCGTGGTGGAGAGCGGCACCGGGAAGCTTCTGCTGGTTTCGGCTATAGAGAAGAGGTCGCTGATTGTGCCGAAAACCTTGAGGATCTGGAGCTTGGAGGAAGGACCTTCGTGGGTAGAGATGGAGAGGATGCCTCAGGAGCTTTATGATCAGTTCTGTCCGGAGATGGAGTCCTGTGGGAATGGGTTTCACTGCGTTGGCCATGGTGAGTTCATTCTGCTCATGATTCCGGGGAGTTATCGTCGTATCACTCATATGGGTGTGTTGTTTGATATGAATACCAAAGAGTGGAAGTGGATGCCTCCATGTCCTTATGTTGGTATGGGTCAACTGAGCCGTGGTTTTGCTTATGATCCCCGGCTGTCTACTCCGGTCACTTCGCTTCTGAATTATCAGTTCACTGCTGCTCCATTTCCGATTTGA

Protein Analysis

422

Amino Acids

48.08

Weight (kDa)

8.74

Isoelectric Point (pI)

45.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 33 - 67 3.5e-06 F-box domain
F-box-like PF12937 33 - 70 3e-06 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017683)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g06880 FvH4_6g06880 FvH4_6g06880
rosa_chinensis RchiOBHm_Chr3g0456371
rosa_laevigata RLG00000025308
rosa_multiflora Rmu_sc0020202.1_g000002
rosa_roxburghii Rroxscaffold_6G00422770
rosa_rugosa Rorug03G0012700
rosa_samantha Rh3BG075100 Rh3CG074700 Rh3DG076500
rosa_wichuraiana Rw3G006270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 564
Acc65I GGTACC 3 cut(s) 321, 351, 516
AccB1I GGYRCC 4 cut(s) 321, 351, 516, 860
AccB7I CCANNNNNTGG 2 cut(s) 383, 1131
AccBSI CCGCTC 1 cut(s) 858
AccI GTMKAC 3 cut(s) 548, 636, 1208
AccII CGCG 1 cut(s) 773
AccIII TCCGGA 1 cut(s) 1003
AciI CCGC 7 cut(s) 130, 152, 411, 602, 618, 773, 858
AclWI GGATC 3 cut(s) 104, 935, 1190
AcoI YGGCCR 1 cut(s) 1042
AcuI CTGAAG 3 cut(s) 336, 390, 854
AcyI GRCGYC 1 cut(s) 561
AfaI GTAC 6 cut(s) 37, 323, 353, 481, 518, 643
AfiI CCNNNNNNNGG 7 cut(s) 383, 530, 624, 801, 847, 1131, 1160
AgsI TTSAA 3 cut(s) 224, 274, 766
AjiI CACGTC 3 cut(s) 546, 634, 784
AluBI AGCT 6 cut(s) 109, 398, 753, 871, 936, 985
AluI AGCT 6 cut(s) 109, 398, 753, 871, 936, 985
AlwI GGATC 3 cut(s) 104, 935, 1190
AlwNI CAGNNNCTG 1 cut(s) 693
Ama87I CYCGRG 1 cut(s) 841
Aor13HI TCCGGA 1 cut(s) 1003
AoxI GGCC 3 cut(s) 276, 774, 1042
ApeKI GCWGC 5 cut(s) 54, 398, 648, 791, 1247
Asp700I GAANNNNTTC 1 cut(s) 827
Asp718I GGTACC 3 cut(s) 321, 351, 516
AspA2I CCTAGG 1 cut(s) 92
AspS9I GGNCC 4 cut(s) 62, 88, 277, 947
AsuC2I CCSGG 3 cut(s) 865, 1074, 1201
AsuHPI GGTGA 4 cut(s) 199, 556, 616, 1061
AvaI CYCGRG 1 cut(s) 841
AvaII GGWCC 3 cut(s) 62, 88, 947
AvrII CCTAGG 1 cut(s) 92
AxyI CCTNAGG 1 cut(s) 978
BalI TGGCCA 1 cut(s) 1044
BanI GGYRCC 4 cut(s) 321, 351, 516, 860
BbsI GAAGAC 2 cut(s) 350, 674
BbvI GCAGC 5 cut(s) 66, 385, 635, 803, 1234
BccI CCATC 6 cut(s) 79, 183, 536, 765, 958, 1003
BceAI ACGGC 2 cut(s) 779, 1164
BclI TGATCA 1 cut(s) 991
BcnI CCSGG 3 cut(s) 865, 1074, 1201
BfaI CTAG 1 cut(s) 93
BfmI CTRYAG 2 cut(s) 181, 888
BisI GCNGC 7 cut(s) 55, 399, 649, 774, 792, 859, 1248
BlnI CCTAGG 1 cut(s) 92
BlsI GCNGC 7 cut(s) 56, 400, 650, 775, 793, 860, 1249
Bme1390I CCNGG 3 cut(s) 865, 1074, 1201
Bme18I GGWCC 3 cut(s) 62, 88, 947
BmeT110I CYCGRG 1 cut(s) 841
BmgBI CACGTC 3 cut(s) 546, 634, 784
BmgT120I GGNCC 4 cut(s) 62, 88, 277, 947
BmiI GGNNCC 9 cut(s) 90, 263, 323, 353, 375, 518, 629, 830, 862
BmrFI CCNGG 3 cut(s) 865, 1074, 1201
BmsI GCATC 3 cut(s) 13, 963, 1131
BpiI GAAGAC 2 cut(s) 350, 674
BplI GAGNNNNNCTC 4 cut(s) 567, 599, 961, 993
BpmI CTGGAG 3 cut(s) 121, 378, 952
BpuEI CTTGAG 1 cut(s) 943
BpuMI CCSGG 3 cut(s) 865, 1074, 1201
BsaHI GRCGYC 1 cut(s) 561
BsaJI CCNNGG 7 cut(s) 80, 92, 512, 1045, 1073, 1180, 1199
BsaWI WCCGGW 2 cut(s) 1003, 1213
BsaXI ACNNNNNCTCC 8 cut(s) 509, 539, 998, 1028, 1069, 1099, 1234, 1264
Bsc4I CCNNNNNNNGG 7 cut(s) 383, 530, 624, 801, 847, 1131, 1160
Bse21I CCTNAGG 1 cut(s) 978
BseAI TCCGGA 1 cut(s) 1003
BseDI CCNNGG 7 cut(s) 80, 92, 512, 1045, 1073, 1180, 1199
BseGI GGATG 6 cut(s) 90, 439, 757, 807, 978, 1146
BseLI CCNNNNNNNGG 7 cut(s) 383, 530, 624, 801, 847, 1131, 1160
BseMII CTCAG 2 cut(s) 992, 1166
BseXI GCAGC 5 cut(s) 66, 385, 635, 803, 1234
Bsh1236I CGCG 1 cut(s) 773
Bsh1285I CGRYCG 1 cut(s) 130
BshFI GGCC 3 cut(s) 278, 776, 1044
BshNI GGYRCC 4 cut(s) 321, 351, 516, 860
BsiEI CGRYCG 1 cut(s) 130
BsiHKCI CYCGRG 1 cut(s) 841
BsiSI CCGG 6 cut(s) 573, 864, 1004, 1073, 1201, 1214
BslFI GGGAC 1 cut(s) 818
BslI CCNNNNNNNGG 7 cut(s) 383, 530, 624, 801, 847, 1131, 1160
BsmFI GGGAC 1 cut(s) 818
BsnI GGCC 3 cut(s) 278, 776, 1044
BsoBI CYCGRG 1 cut(s) 841
Bsp13I TCCGGA 1 cut(s) 1003
Bsp143I GATC 5 cut(s) 96, 167, 927, 991, 1195
Bsp19I CCATGG 2 cut(s) 80, 1045
BspACI CCGC 7 cut(s) 130, 152, 411, 602, 618, 773, 858
BspANI GGCC 3 cut(s) 278, 776, 1044
BspCNI CTCAG 2 cut(s) 991, 1167
BspEI TCCGGA 1 cut(s) 1003
BspFNI CGCG 1 cut(s) 773
BspHI TCATGA 2 cut(s) 70, 1065
BspLI GGNNCC 9 cut(s) 90, 263, 323, 353, 375, 518, 629, 830, 862
BspPI GGATC 3 cut(s) 104, 935, 1190
BspT107I GGYRCC 4 cut(s) 321, 351, 516, 860
BsrBI CCGCTC 1 cut(s) 858
BssECI CCNNGG 7 cut(s) 80, 92, 512, 1045, 1073, 1180, 1199
BssMI GATC 5 cut(s) 96, 167, 927, 991, 1195
BssNI GRCGYC 1 cut(s) 561
BssT1I CCWWGG 4 cut(s) 80, 92, 512, 1045
Bst4CI ACNGT 5 cut(s) 251, 356, 381, 541, 641
Bst6I CTCTTC 3 cut(s) 272, 818, 890
BstACI GRCGYC 1 cut(s) 561
BstC8I GCNNGC 2 cut(s) 46, 156
BstDEI CTNAG 2 cut(s) 978, 1175
BstDSI CCRYGG 3 cut(s) 80, 1045, 1180
BstF5I GGATG 6 cut(s) 90, 439, 757, 807, 978, 1146
BstFNI CGCG 1 cut(s) 773
BstKTI GATC 5 cut(s) 99, 170, 930, 994, 1198
BstMBI GATC 5 cut(s) 96, 167, 927, 991, 1195
BstMCI CGRYCG 1 cut(s) 130
BstMWI GCNNNNNNNGC 3 cut(s) 54, 910, 982
BstNSI RCATGY 1 cut(s) 728
BstSCI CCNGG 3 cut(s) 863, 1072, 1199
BstSFI CTRYAG 2 cut(s) 181, 888
BstUI CGCG 1 cut(s) 773
BstV1I GCAGC 5 cut(s) 66, 385, 635, 803, 1234
BstV2I GAAGAC 2 cut(s) 350, 674
BstX2I RGATCY 2 cut(s) 96, 927
BstYI RGATCY 2 cut(s) 96, 927
Bsu36I CCTNAGG 1 cut(s) 978
BsuRI GGCC 3 cut(s) 278, 776, 1044
BtgI CCRYGG 3 cut(s) 80, 1045, 1180
BtrI CACGTC 3 cut(s) 546, 634, 784
BtsCI GGATG 6 cut(s) 90, 439, 757, 807, 978, 1146
BtsI GCAGTG 3 cut(s) 64, 1033, 1242
BtsIMutI CAGTG 5 cut(s) 64, 247, 537, 1033, 1242
Cac8I GCNNGC 2 cut(s) 46, 156
CaiI CAGNNNCTG 1 cut(s) 693
CciI TCATGA 2 cut(s) 70, 1065
Cfr13I GGNCC 4 cut(s) 62, 88, 277, 947
Csp6I GTAC 6 cut(s) 36, 322, 352, 480, 517, 642
CviAII CATG 8 cut(s) 71, 81, 663, 725, 748, 1046, 1066, 1149
CviQI GTAC 6 cut(s) 36, 322, 352, 480, 517, 642
DdeI CTNAG 2 cut(s) 978, 1175
DpnI GATC 5 cut(s) 98, 169, 929, 993, 1197
DpnII GATC 5 cut(s) 96, 167, 927, 991, 1195
EaeI YGGCCR 1 cut(s) 1042
Eam1104I CTCTTC 3 cut(s) 272, 818, 890
EarI CTCTTC 3 cut(s) 272, 818, 890
Eco130I CCWWGG 4 cut(s) 80, 92, 512, 1045
Eco32I GATATC 1 cut(s) 238
Eco47I GGWCC 3 cut(s) 62, 88, 947
Eco57I CTGAAG 3 cut(s) 336, 390, 854
Eco81I CCTNAGG 1 cut(s) 978
Eco88I CYCGRG 1 cut(s) 841
EcoO109I RGGNCCY 1 cut(s) 947
EcoRV GATATC 1 cut(s) 238
EcoT14I CCWWGG 4 cut(s) 80, 92, 512, 1045
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 4 cut(s) 80, 92, 512, 1045
FaeI CATG 8 cut(s) 74, 84, 666, 728, 751, 1049, 1069, 1152
FalI AAGNNNNNCTT 2 cut(s) 309, 341
FaqI GGGAC 1 cut(s) 818
FatI CATG 8 cut(s) 70, 80, 662, 724, 747, 1045, 1065, 1148
FauNDI CATATG 1 cut(s) 1098
FbaI TGATCA 1 cut(s) 991
FblI GTMKAC 3 cut(s) 548, 636, 1208
Fnu4HI GCNGC 7 cut(s) 55, 399, 649, 774, 792, 859, 1248
FokI GGATG 6 cut(s) 97, 446, 744, 794, 985, 1153
Fsp4HI GCNGC 7 cut(s) 55, 399, 649, 774, 792, 859, 1248
FspBI CTAG 1 cut(s) 93
GluI GCNGC 7 cut(s) 55, 399, 649, 774, 792, 859, 1248
GsuI CTGGAG 3 cut(s) 121, 378, 952
HaeIII GGCC 3 cut(s) 278, 776, 1044
HapII CCGG 6 cut(s) 573, 864, 1004, 1073, 1201, 1214
Hin1I GRCGYC 1 cut(s) 561
Hin1II CATG 8 cut(s) 74, 84, 666, 728, 751, 1049, 1069, 1152
HincII GTYRAC 3 cut(s) 637, 730, 1172
HindII GTYRAC 3 cut(s) 637, 730, 1172
HindIII AAGCTT 1 cut(s) 869
HinfI GANTC 5 cut(s) 283, 690, 704, 1013, 1069
HpaI GTTAAC 1 cut(s) 730
HpaII CCGG 6 cut(s) 573, 864, 1004, 1073, 1201, 1214
HphI GGTGA 4 cut(s) 199, 556, 616, 1061
Hpy166II GTNNAC 8 cut(s) 62, 207, 549, 637, 730, 1172, 1209, 1242
Hpy188I TCNGA 6 cut(s) 120, 167, 433, 447, 1230, 1260
Hpy188III TCNNGA 9 cut(s) 71, 100, 171, 832, 841, 931, 980, 1004, 1066
Hpy8I GTNNAC 8 cut(s) 62, 207, 549, 637, 730, 1172, 1209, 1242
Hpy99I CGWCG 4 cut(s) 638, 641, 773, 1089
HpyAV CCTTC 7 cut(s) 169, 226, 230, 311, 729, 938, 960
HpyCH4III ACNGT 5 cut(s) 251, 356, 381, 541, 641
HpyCH4IV ACGT 5 cut(s) 545, 561, 633, 768, 783
HpyCH4V TGCA 3 cut(s) 4, 696, 724
HpyF10VI GCNNNNNNNGC 3 cut(s) 54, 910, 982
HpyF3I CTNAG 2 cut(s) 978, 1175
HpySE526I ACGT 5 cut(s) 545, 561, 633, 768, 783
Hsp92I GRCGYC 1 cut(s) 561
Hsp92II CATG 8 cut(s) 74, 84, 666, 728, 751, 1049, 1069, 1152
Kpn2I TCCGGA 1 cut(s) 1003
KpnI GGTACC 3 cut(s) 325, 355, 520
Ksp22I TGATCA 1 cut(s) 991
KspAI GTTAAC 1 cut(s) 730
Kzo9I GATC 5 cut(s) 96, 167, 927, 991, 1195
LmnI GCTCC 5 cut(s) 114, 448, 933, 982, 1255
Lsp1109I GCAGC 5 cut(s) 66, 385, 635, 803, 1234
LweI GCATC 3 cut(s) 13, 963, 1131
MaeI CTAG 1 cut(s) 93
MaeII ACGT 5 cut(s) 545, 561, 633, 768, 783
MaeIII GTNAC 4 cut(s) 293, 541, 562, 1216
MalI GATC 5 cut(s) 98, 169, 929, 993, 1197
MbiI CCGCTC 1 cut(s) 858
MboI GATC 5 cut(s) 96, 167, 927, 991, 1195
MflI RGATCY 2 cut(s) 96, 927
MlsI TGGCCA 1 cut(s) 1044
MluCI AATT 1 cut(s) 1231
MluNI TGGCCA 1 cut(s) 1044
MlyI GAGTC 3 cut(s) 684, 698, 1022
MmeI TCCRAC 2 cut(s) 404, 489
Mox20I TGGCCA 1 cut(s) 1044
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1003
MroXI GAANNNNTTC 1 cut(s) 827
MscI TGGCCA 1 cut(s) 1044
MseI TTAA 2 cut(s) 15, 729
MslI CAYNNNNRTG 2 cut(s) 1097, 1101
Msp20I TGGCCA 1 cut(s) 1044
MspA1I CMGCKG 1 cut(s) 398
MspI CCGG 6 cut(s) 573, 864, 1004, 1073, 1201, 1214
MspR9I CCNGG 3 cut(s) 865, 1074, 1201
MvnI CGCG 1 cut(s) 773
MwoI GCNNNNNNNGC 3 cut(s) 54, 910, 982
NciI CCSGG 3 cut(s) 865, 1074, 1201
NcoI CCATGG 2 cut(s) 80, 1045
NdeI CATATG 1 cut(s) 1098
NdeII GATC 5 cut(s) 96, 167, 927, 991, 1195
NlaIII CATG 8 cut(s) 74, 84, 666, 728, 751, 1049, 1069, 1152
NlaIV GGNNCC 9 cut(s) 90, 263, 323, 353, 375, 518, 629, 830, 862
NmeAIII GCCGAG 1 cut(s) 686
NmuCI GTSAC 4 cut(s) 293, 541, 562, 1216
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 728
PagI TCATGA 2 cut(s) 70, 1065
PdmI GAANNNNTTC 1 cut(s) 827
PfeI GAWTC 2 cut(s) 283, 1069
PflMI CCANNNNNTGG 2 cut(s) 383, 1131
PkrI GCNGC 7 cut(s) 56, 400, 650, 775, 793, 860, 1249
PleI GAGTC 3 cut(s) 684, 698, 1021
PpsI GAGTC 3 cut(s) 684, 698, 1021
PpuMI RGGWCCY 1 cut(s) 947
Psp5II RGGWCCY 1 cut(s) 947
PspN4I GGNNCC 9 cut(s) 90, 263, 323, 353, 375, 518, 629, 830, 862
PspPI GGNCC 4 cut(s) 62, 88, 277, 947
PspPPI RGGWCCY 1 cut(s) 947
PstNI CAGNNNCTG 1 cut(s) 693
PsuI RGATCY 2 cut(s) 96, 927
PvuII CAGCTG 1 cut(s) 398
RsaI GTAC 6 cut(s) 37, 323, 353, 481, 518, 643
RsaNI GTAC 6 cut(s) 36, 322, 352, 480, 517, 642
RseI CAYNNNNRTG 2 cut(s) 1097, 1101
SalI GTCGAC 1 cut(s) 635
SaqAI TTAA 2 cut(s) 15, 729
SatI GCNGC 7 cut(s) 55, 399, 649, 774, 792, 859, 1248
Sau3AI GATC 5 cut(s) 96, 167, 927, 991, 1195
Sau96I GGNCC 4 cut(s) 62, 88, 277, 947
SchI GAGTC 3 cut(s) 684, 698, 1022
ScrFI CCNGG 3 cut(s) 865, 1074, 1201
SfaNI GCATC 3 cut(s) 13, 963, 1131
SfcI CTRYAG 2 cut(s) 181, 888
SgrDI CGTCGACG 1 cut(s) 635
SinI GGWCC 3 cut(s) 62, 88, 947
SmiMI CAYNNNNRTG 2 cut(s) 1097, 1101
SmlI CTYRAG 1 cut(s) 922
SmoI CTYRAG 1 cut(s) 922
Sse9I AATT 1 cut(s) 1231
SsiI CCGC 7 cut(s) 130, 152, 411, 602, 618, 773, 858
SspMI CTAG 1 cut(s) 93
StyD4I CCNGG 3 cut(s) 863, 1072, 1199
StyI CCWWGG 4 cut(s) 80, 92, 512, 1045
TaaI ACNGT 5 cut(s) 251, 356, 381, 541, 641
TaiI ACGT 5 cut(s) 548, 564, 636, 771, 786
TaqI TCGA 5 cut(s) 126, 172, 234, 330, 636
TasI AATT 1 cut(s) 1231
TauI GCSGC 2 cut(s) 776, 861
TfiI GAWTC 2 cut(s) 283, 1069
Tru1I TTAA 2 cut(s) 15, 729
Tru9I TTAA 2 cut(s) 15, 729
TscAI CASTG 5 cut(s) 64, 254, 544, 1040, 1249
TseFI GTSAC 4 cut(s) 293, 541, 562, 1216
TseI GCWGC 5 cut(s) 54, 398, 648, 791, 1247
Tsp45I GTSAC 4 cut(s) 293, 541, 562, 1216
TspDTI ATGAA 5 cut(s) 38, 354, 836, 1045, 1133
TspGWI ACGGA 1 cut(s) 747
TspRI CASTG 5 cut(s) 64, 254, 544, 1040, 1249
Van91I CCANNNNNTGG 2 cut(s) 383, 1131
VpaK11BI GGWCC 3 cut(s) 62, 88, 947
XceI RCATGY 1 cut(s) 728
XmaJI CCTAGG 1 cut(s) 92
XmiI GTMKAC 3 cut(s) 548, 636, 1208
XmnI GAANNNNTTC 1 cut(s) 827
XspI CTAG 1 cut(s) 93
ZraI GACGTC 1 cut(s) 562
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.