FvH4_6g09840
NAC Family

Probably inactive leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0009915
Physical Location & Seq
Forward (+)
5860098 .. 5864176
4079 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g09840.t1

Sequence Viewer

Length: 2871 bp
ATGTCACTCATCAATAAGCTAGTGTTTCTTCTGCTACTCTGCCTGCCTGTACTAGTGGTTTCCTTAAACCCTGTTTTCAACGACGACGTTTTGGGGCTGATCGTGTTCAAGGCCGGGTTGCTGGACCCGGAGGCCAAGCTCAGTTCGTGGAACGAAGAGGATGACACTCCTTGTCATTGGGTCGGTGTCAAATGCGATGTGAGAAGTAACAGAGTCTCTGAGCTTGCTCTGGATGGGTTTGGTCTATCCGGGCATGTGAACCGTGGCCTTTTGAGGCTGCAGGTCATTCAAAGACTCTCACTTTCTAATAACAACTTCACTGGGTCTATAAACCCTGATCTGGCTCACATTGGGACTTTGCAAGTCATTGATTTGAGCCAGAATAGCCTTTCCGGGTCGATCCCTGATGAGTTTTTTCAACAATGTGGGTCACTGAGAGTTGTTTCGTTTGCAAAGAACAAGCTATCTGGGAGAATTCCGGAGTCTTTGAGCTTCTGCTCAGCTTTGGTGGCGGTGAACTTCTCGTCGAATCAGCTTTCCGGGAGTTTACCATCCGGGATATGGTATTTGAGGGGGCTTCAGGAGCTGGACTTGTCAGGGAACTTGCTGGAGGGTGAAGTTCATGAAGGTATTGGTTATTTGTATGATTTGAGAGTAGTTAACTTGGGGAAGAATCGGTTTTCGGGGTGGCTTCCCGGGGATGTTGGAGGCTGTTCTCATTTGAAGTTGCTTGATTTTAGTGATAATTTGTTTTCTGGGGGGATTCCTGAGTCGATTAAGAGACTTGGTTTGTGTAGGTCATTGAGTTTGAAGGGAAACTCTCTTACAGGTCAAGTTCCAGCTTGGATTGGTGAGTTGAGAAGCCTTGGGATGTTAGATTTATCTTGTAATAACTTTTCTGGTGGAATTCCTGGTTCATTAGGAAATCTAAAGCTACTTGAGAAGTTGAATTTGTCAGTGAATGAATTCACTGGGAGCTTGCCAGAGTCACTGACAAATTGCTTCAACCTTTTAGCTCTAGATGTTAGCCGAAATCAGTTGGTAGGTAAACTTCCTTCATGGATTTTGAAGCTTGGTGTAGGACATGGAAAGCTCGAGTACAATCCATTGAAACCAATTGCTGCCTCTCATGGAGGTCTTCAGGTGTTGGATTTGTCTTCCAATGCATTTTCCGATGTGCTTCCATCTGATATCGGGGTTCTTAGTAGTTTGCAGTTCTTGAATGTGTCACGGAACCAGCTTCTTGGTTCTATTCCTGCAAGTATAGGTAATTTGAAGACAGCATATGTTCTGGACTTGAGCGACAATAGGCTGAATGGAAGCATTCCTTCTGAAATTGGAGGAGCAGTCTCACTCAAGGAGCTAAGGCTGCATAAGAACTTTCTAACTGGGAAGTTACCATCTCAGATTGAGAAGTGCTCATCTCTATCATCTCTGTTGCTATCCCAGAACAATCTTTCTGGCCCTGTTCCTGTAGCCATTGCAAACCTTACCAATCTTCAATACGTCGACTTGTCTTTAAACCAGTTCTCTGGAAGCTTGCCTAAAGAGTTGACTAATCTTTCCCACCTCCTCTACTTCAATGTCTCCTACAATCACCTTCAGGGTGAGTTACCAGTGGGGGGCTTCTTCAATACAATCTCACCCTCATCTATCTCAGGCAATCCGTCCCTATGTGGTTCTGTTCTTAATCTTTCATGCCCTGCTGTTCACCCCAAACCCATTGTCCTAAACCCAAATTCTAATAGCACTGGTGGTGGCTCTTCCTCTCTAACTCATGGTCACAAGAATGTATTCAGCATATCTGCCCTCATTGCCATAGGTGCTGCTGCATTCATTGCAATTGGTGTTATAGCTATTACTGTCCTCAATATGCATGTGCGGTCTTCAATGACACATTCTGCTCCTCTTCCGCTACCTGGTGGGGAAGATTTCAGCTGTTCCCCGAGTACTGATTCAAAGTATGGCAAGCTTGTTATGTTTTCTGGTGATGCTGACTTTGCTGCTGGGGCACAAGCCTTGCTCAACAAGGACTGTGAGCTTGGTCGTGGTGGCTTTGGAGTCGTGTACAGAACAGTCCTCAGAGATGGGCGTTCAGTTGCAATAAAAAAGTTAACAGTCTCAAGTTTGATCAAGTCCCAGGAAGATTTTGAGAGGGAAGTAAAAGGACTTGGAAAGATAAGGCACCATAATCTTGTGACACTTGAAGGGTATTACTGGACTCCTTCCTTGCAGCTGCTCATATATGAATACATACCATGTGGAAGTCTGTACAAGAATCTGCATGACGGACCTGACCAGAGTGGTCTCTCTTGGCGACAGAGGTTCAACATAATTCTTGGGATGGCAAAGGGTTTGGCTCATCTGCATCAAATGAACTTGATCCACTACAACTTGAAATCAACTAATATTTTGATAGACAGCTCTGGTGAACCGAAAGTAGGAGACTCTGGTTTGGCAAGGTTGTTGCCAATGGTAGACCGGTGCATCTTGAGCAGCAAAATCCAAAGTGCACTTGGGTACATGGCCCCTGAGTTCGCTTGTCAAACGGTCAAGATTACTGAGAAATGTGATGTGTATGGGTTTGGGGTCTTGGTTTTGGAGGTGGTGACTGGAAAGCGGCCTGTGGAATATATGGAAGATGATGTGGTGATTCTCTGTGACATGGTGAGGGGGGAACTTGAGGAAGGCAGGGTGGAAGAATGTCTTGACAGAAAACTTTTGGGTAATTATCCAGCAGAGGAGGCCATTCCAGTGATCAAGCTTGGTTTGATATGTGCTTCACAAGTTCCATCAAATCGTCCCGATATGAGTGAAGTAGTCAACATTTTAGAACTCATCCAATGCCCTTCAGAAGGCCATGAAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

957

Amino Acids

102.99

Weight (kDa)

6.02

Isoelectric Point (pI)

38.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 66 1.3e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 194 - 338 6.1e-09 Leucine-rich repeat region
LRR_14 PF23598 376 - 522 1.3e-09 Leucine-rich repeat region
PK_Tyr_Ser-Thr PF07714 677 - 943 2.6e-40 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 678 - 882 4.2e-38 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 271
AccB1I GGYRCC 1 cut(s) 2184
AccI GTMKAC 2 cut(s) 1509, 2478
AccIII TCCGGA 1 cut(s) 478
AciI CCGC 4 cut(s) 512, 1882, 1913, 2620
AclWI GGATC 2 cut(s) 394, 2377
AcsI RAATTY 5 cut(s) 474, 906, 949, 965, 1738
AcuI CTGAAG 4 cut(s) 563, 1124, 1586, 2835
AfaI GTAC 6 cut(s) 51, 1100, 1951, 2069, 2273, 2522
AfiI CCNNNNNNNGG 6 cut(s) 340, 561, 1622, 1919, 2441, 2855
AgeI ACCGGT 1 cut(s) 2481
AhlI ACTAGT 1 cut(s) 52
AjnI CCWGG 3 cut(s) 910, 1918, 2139
Alw21I GWGCWC 2 cut(s) 1421, 2515
Alw26I GTCTC 7 cut(s) 220, 775, 1354, 1591, 2125, 2312, 2439
Alw44I GTGCAC 1 cut(s) 2511
AlwI GGATC 2 cut(s) 394, 2377
AlwNI CAGNNNCTG 1 cut(s) 586
Ama87I CYCGRG 3 cut(s) 695, 1094, 1945
Aor13HI TCCGGA 1 cut(s) 478
AoxI GGCC 8 cut(s) 111, 132, 265, 1462, 2526, 2621, 2745, 2857
ApaLI GTGCAC 1 cut(s) 2511
ApeKI GCWGC 9 cut(s) 277, 1121, 1369, 1826, 1829, 2003, 2233, 2236, 2496
ApoI RAATTY 5 cut(s) 474, 906, 949, 965, 1738
ArsI GACNNNNNNTTYG 2 cut(s) 1710, 1742
AsiGI ACCGGT 1 cut(s) 2481
Asp700I GAANNNNTTC 2 cut(s) 965, 1793
AspS9I GGNCC 4 cut(s) 124, 1463, 2291, 2527
AsuC2I CCSGG 8 cut(s) 115, 128, 250, 394, 541, 556, 696, 697
AvaI CYCGRG 3 cut(s) 695, 1094, 1945
AvaII GGWCC 2 cut(s) 124, 2291
BaeGI GKGCMC 2 cut(s) 2014, 2515
BanI GGYRCC 1 cut(s) 2184
BarI GAAGNNNNNNTAC 4 cut(s) 1035, 1039, 1067, 1071
BbsI GAAGAC 4 cut(s) 1130, 1149, 1283, 1878
Bbv12I GWGCWC 2 cut(s) 1421, 2515
BbvI GCAGC 9 cut(s) 264, 1108, 1356, 1813, 1816, 1990, 2223, 2245, 2508
BccI CCATC 7 cut(s) 227, 559, 1192, 1408, 2081, 2338, 2800
BciT130I CCWGG 3 cut(s) 912, 1920, 2141
BclI TGATCA 2 cut(s) 2130, 2757
BcnI CCSGG 8 cut(s) 115, 128, 250, 394, 541, 556, 696, 697
BcoDI GTCTC 7 cut(s) 220, 775, 1354, 1591, 2125, 2312, 2439
BcuI ACTAGT 1 cut(s) 52
BfaI CTAG 3 cut(s) 20, 53, 1019
BfmI CTRYAG 2 cut(s) 278, 1473
BfuAI ACCTGC 1 cut(s) 271
BlpI GCTNAGC 1 cut(s) 499
BmcAI AGTACT 1 cut(s) 1951
Bme18I GGWCC 2 cut(s) 124, 2291
BmeT110I CYCGRG 3 cut(s) 695, 1094, 1945
BmgT120I GGNCC 4 cut(s) 124, 1463, 2291, 2527
BmiI GGNNCC 4 cut(s) 126, 1235, 2186, 2529
BmrI ACTGGG 3 cut(s) 330, 981, 1398
BmsI GCATC 3 cut(s) 1981, 2377, 2496
BmuI ACTGGG 3 cut(s) 330, 981, 1398
BpiI GAAGAC 4 cut(s) 1130, 1149, 1283, 1878
BplI GAGNNNNNCTC 2 cut(s) 1403, 1435
BpmI CTGGAG 1 cut(s) 629
Bpu10I CCTNAGC 1 cut(s) 1364
Bpu1102I GCTNAGC 1 cut(s) 499
BpuEI CTTGAG 6 cut(s) 959, 1318, 1340, 2107, 2512, 2702
BpuMI CCSGG 8 cut(s) 115, 128, 250, 394, 541, 556, 696, 697
BsaI GGTCTC 1 cut(s) 2312
BsaJI CCNNGG 5 cut(s) 262, 695, 696, 865, 2139
BsaWI WCCGGW 2 cut(s) 478, 2481
BsaXI ACNNNNNCTCC 2 cut(s) 1332, 1362
Bsc4I CCNNNNNNNGG 6 cut(s) 340, 561, 1622, 1919, 2441, 2855
Bse118I RCCGGY 1 cut(s) 2481
Bse1I ACTGG 9 cut(s) 325, 976, 1393, 1525, 1616, 1756, 2222, 2617, 2753
Bse3DI GCAATG 3 cut(s) 1479, 1812, 1836
BseAI TCCGGA 1 cut(s) 478
BseBI CCWGG 3 cut(s) 912, 1920, 2141
BseDI CCNNGG 5 cut(s) 262, 695, 696, 865, 2139
BseGI GGATG 7 cut(s) 166, 238, 551, 706, 876, 2349, 2838
BseLI CCNNNNNNNGG 6 cut(s) 340, 561, 1622, 1919, 2441, 2855
BseMI GCAATG 3 cut(s) 1479, 1812, 1836
BseNI ACTGG 9 cut(s) 325, 976, 1393, 1525, 1616, 1756, 2222, 2617, 2753
BseRI GAGGAG 4 cut(s) 1356, 1562, 1896, 2756
BseSI GKGCMC 2 cut(s) 2014, 2515
BseXI GCAGC 9 cut(s) 264, 1108, 1356, 1813, 1816, 1990, 2223, 2245, 2508
BseYI CCCAGC 1 cut(s) 2006
BshFI GGCC 8 cut(s) 113, 134, 267, 1464, 2528, 2623, 2747, 2859
BshNI GGYRCC 1 cut(s) 2184
BshTI ACCGGT 1 cut(s) 2481
BsiHKAI GWGCWC 2 cut(s) 1421, 2515
BsiHKCI CYCGRG 3 cut(s) 695, 1094, 1945
BsiSI CCGG 9 cut(s) 114, 128, 249, 393, 479, 540, 555, 696, 2482
BslFI GGGAC 4 cut(s) 367, 1654, 2122, 2787
BslI CCNNNNNNNGG 6 cut(s) 340, 561, 1622, 1919, 2441, 2855
BsmAI GTCTC 7 cut(s) 220, 775, 1354, 1591, 2125, 2312, 2439
BsmFI GGGAC 4 cut(s) 367, 1654, 2122, 2787
BsmI GAATGC 2 cut(s) 1323, 1832
BsnI GGCC 8 cut(s) 113, 134, 267, 1464, 2528, 2623, 2747, 2859
Bso31I GGTCTC 1 cut(s) 2312
BsoBI CYCGRG 3 cut(s) 695, 1094, 1945
Bsp1286I GDGCHC 3 cut(s) 1421, 2014, 2515
Bsp13I TCCGGA 1 cut(s) 478
Bsp1407I TGTACA 2 cut(s) 2067, 2271
Bsp143I GATC 6 cut(s) 99, 337, 399, 2130, 2382, 2757
Bsp1720I GCTNAGC 1 cut(s) 499
BspACI CCGC 4 cut(s) 512, 1882, 1913, 2620
BspANI GGCC 8 cut(s) 113, 134, 267, 1464, 2528, 2623, 2747, 2859
BspEI TCCGGA 1 cut(s) 478
BspHI TCATGA 1 cut(s) 622
BspLI GGNNCC 4 cut(s) 126, 1235, 2186, 2529
BspMAI CTGCAG 1 cut(s) 282
BspMI ACCTGC 1 cut(s) 271
BspPI GGATC 2 cut(s) 394, 2377
BspQI GCTCTTC 1 cut(s) 1768
BspT107I GGYRCC 1 cut(s) 2184
BspTNI GGTCTC 1 cut(s) 2312
BsrDI GCAATG 3 cut(s) 1479, 1812, 1836
BsrFI RCCGGY 1 cut(s) 2481
BsrGI TGTACA 2 cut(s) 2067, 2271
BsrI ACTGG 9 cut(s) 325, 976, 1393, 1525, 1616, 1756, 2222, 2617, 2753
BssAI RCCGGY 1 cut(s) 2481
BssECI CCNNGG 5 cut(s) 262, 695, 696, 865, 2139
BssMI GATC 6 cut(s) 99, 337, 399, 2130, 2382, 2757
BssT1I CCWWGG 1 cut(s) 865
Bst2UI CCWGG 3 cut(s) 912, 1920, 2141
Bst4CI ACNGT 6 cut(s) 263, 1864, 2036, 2077, 2119, 2551
Bst6I CTCTTC 3 cut(s) 150, 1768, 1914
BstAPI GCANNNNNTGC 1 cut(s) 1838
BstAUI TGTACA 2 cut(s) 2067, 2271
BstC8I GCNNGC 5 cut(s) 44, 225, 980, 1541, 1970
BstDSI CCRYGG 1 cut(s) 262
BstENI CCTNNNNNAGG 1 cut(s) 2853
BstF5I GGATG 7 cut(s) 166, 238, 551, 706, 876, 2349, 2838
BstKTI GATC 6 cut(s) 102, 340, 402, 2133, 2385, 2760
BstMAI GTCTC 7 cut(s) 220, 775, 1354, 1591, 2125, 2312, 2439
BstMBI GATC 6 cut(s) 99, 337, 399, 2130, 2382, 2757
BstNI CCWGG 3 cut(s) 912, 1920, 2141
BstNSI RCATGY 2 cut(s) 257, 1880
BstSFI CTRYAG 2 cut(s) 278, 1473
BstSLI GKGCMC 2 cut(s) 2014, 2515
BstV1I GCAGC 9 cut(s) 264, 1108, 1356, 1813, 1816, 1990, 2223, 2245, 2508
BstV2I GAAGAC 4 cut(s) 1130, 1149, 1283, 1878
BstXI CCANNNNNNTGG 2 cut(s) 1244, 1532
BsuRI GGCC 8 cut(s) 113, 134, 267, 1464, 2528, 2623, 2747, 2859
BtgI CCRYGG 1 cut(s) 262
BtgZI GCGATG 1 cut(s) 210
BtsCI GGATG 7 cut(s) 166, 238, 551, 706, 876, 2349, 2838
BtsIMutI CAGTG 8 cut(s) 318, 431, 963, 969, 989, 1623, 1749, 2760
BveI ACCTGC 1 cut(s) 271
Cac8I GCNNGC 5 cut(s) 44, 225, 980, 1541, 1970
CaiI CAGNNNCTG 1 cut(s) 586
CciI TCATGA 1 cut(s) 622
Cfr10I RCCGGY 1 cut(s) 2481
Cfr13I GGNCC 4 cut(s) 124, 1463, 2291, 2527
Cfr9I CCCGGG 1 cut(s) 695
CsiI ACCWGGT 1 cut(s) 1918
Csp6I GTAC 6 cut(s) 50, 1099, 1950, 2068, 2272, 2521
CspAI ACCGGT 1 cut(s) 2481
CviQI GTAC 6 cut(s) 50, 1099, 1950, 2068, 2272, 2521
DpnI GATC 6 cut(s) 101, 339, 401, 2132, 2384, 2759
DpnII GATC 6 cut(s) 99, 337, 399, 2130, 2382, 2757
DraI TTTAAA 1 cut(s) 1521
Eam1104I CTCTTC 3 cut(s) 150, 1768, 1914
EarI CTCTTC 3 cut(s) 150, 1768, 1914
Eco130I CCWWGG 1 cut(s) 865
Eco31I GGTCTC 1 cut(s) 2312
Eco32I GATATC 1 cut(s) 1192
Eco47I GGWCC 2 cut(s) 124, 2291
Eco57I CTGAAG 4 cut(s) 563, 1124, 1586, 2835
Eco88I CYCGRG 3 cut(s) 695, 1094, 1945
EcoNI CCTNNNNNAGG 1 cut(s) 2853
EcoRI GAATTC 3 cut(s) 474, 906, 965
EcoRII CCWGG 3 cut(s) 910, 1918, 2139
EcoRV GATATC 1 cut(s) 1192
EcoT14I CCWWGG 1 cut(s) 865
EcoT22I ATGCAT 2 cut(s) 1168, 1878
ErhI CCWWGG 1 cut(s) 865
FalI AAGNNNNNCTT 4 cut(s) 1312, 1344, 2691, 2723
FaqI GGGAC 4 cut(s) 367, 1654, 2122, 2787
FauNDI CATATG 1 cut(s) 1285
FbaI TGATCA 2 cut(s) 2130, 2757
FblI GTMKAC 2 cut(s) 1509, 2478
FokI GGATG 7 cut(s) 173, 245, 538, 713, 883, 2356, 2825
FspBI CTAG 3 cut(s) 20, 53, 1019
GsaI CCCAGC 1 cut(s) 2010
GsuI CTGGAG 1 cut(s) 629
HaeIII GGCC 8 cut(s) 113, 134, 267, 1464, 2528, 2623, 2747, 2859
HapII CCGG 9 cut(s) 114, 128, 249, 393, 479, 540, 555, 696, 2482
HincII GTYRAC 5 cut(s) 661, 1510, 1554, 2115, 2824
HindII GTYRAC 5 cut(s) 661, 1510, 1554, 2115, 2824
HindIII AAGCTT 4 cut(s) 1070, 1537, 1970, 2762
HpaI GTTAAC 2 cut(s) 661, 2115
HpaII CCGG 9 cut(s) 114, 128, 249, 393, 479, 540, 555, 696, 2482
Hpy188I TCNGA 7 cut(s) 220, 1174, 1189, 1333, 1407, 2084, 2854
Hpy99I CGWCG 4 cut(s) 86, 89, 529, 1511
HpyCH4III ACNGT 6 cut(s) 263, 1864, 2036, 2077, 2119, 2551
HpyCH4IV ACGT 2 cut(s) 87, 1506
HpySE526I ACGT 2 cut(s) 87, 1506
Kpn2I TCCGGA 1 cut(s) 478
Ksp22I TGATCA 2 cut(s) 2130, 2757
KspAI GTTAAC 2 cut(s) 661, 2115
Kzo9I GATC 6 cut(s) 99, 337, 399, 2130, 2382, 2757
LguI GCTCTTC 1 cut(s) 1768
LmnI GCTCC 5 cut(s) 583, 975, 1343, 1360, 1909
Lsp1109I GCAGC 9 cut(s) 264, 1108, 1356, 1813, 1816, 1990, 2223, 2245, 2508
LweI GCATC 3 cut(s) 1981, 2377, 2496
MabI ACCWGGT 1 cut(s) 1918
MaeI CTAG 3 cut(s) 20, 53, 1019
MaeII ACGT 2 cut(s) 87, 1506
MalI GATC 6 cut(s) 101, 339, 401, 2132, 2384, 2759
MboI GATC 6 cut(s) 99, 337, 399, 2130, 2382, 2757
MfeI CAATTG 2 cut(s) 1116, 1842
MhlI GDGCHC 3 cut(s) 1421, 2014, 2515
MlyI GAGTC 8 cut(s) 222, 288, 491, 779, 995, 2070, 2215, 2441
MmeI TCCRAC 2 cut(s) 685, 1128
Mph1103I ATGCAT 2 cut(s) 1168, 1878
MroI TCCGGA 1 cut(s) 478
MroXI GAANNNNTTC 2 cut(s) 965, 1793
MseI TTAA 6 cut(s) 65, 660, 777, 1520, 1689, 2114
MslI CAYNNNNRTG 2 cut(s) 1788, 2753
MspA1I CMGCKG 2 cut(s) 1938, 2236
MspI CCGG 9 cut(s) 114, 128, 249, 393, 479, 540, 555, 696, 2482
MunI CAATTG 2 cut(s) 1116, 1842
Mva1269I GAATGC 2 cut(s) 1323, 1832
MvaI CCWGG 3 cut(s) 912, 1920, 2141
NciI CCSGG 8 cut(s) 115, 128, 250, 394, 541, 556, 696, 697
NdeI CATATG 1 cut(s) 1285
NdeII GATC 6 cut(s) 99, 337, 399, 2130, 2382, 2757
NlaIV GGNNCC 4 cut(s) 126, 1235, 2186, 2529
NmuCI GTSAC 8 cut(s) 3, 429, 987, 1227, 1781, 2197, 2608, 2660
NsiI ATGCAT 2 cut(s) 1168, 1878
NspI RCATGY 2 cut(s) 257, 1880
PaeR7I CTCGAG 1 cut(s) 1094
PagI TCATGA 1 cut(s) 622
PciSI GCTCTTC 1 cut(s) 1768
PctI GAATGC 2 cut(s) 1323, 1832
PdmI GAANNNNTTC 2 cut(s) 965, 1793
PfeI GAWTC 6 cut(s) 529, 673, 763, 1955, 2278, 2653
PfoI TCCNGGA 2 cut(s) 539, 554
PinAI ACCGGT 1 cut(s) 2481
PleI GAGTC 8 cut(s) 221, 288, 490, 778, 994, 2069, 2215, 2441
PpsI GAGTC 8 cut(s) 221, 288, 490, 778, 994, 2069, 2215, 2441
Psp6I CCWGG 3 cut(s) 910, 1918, 2139
PspFI CCCAGC 1 cut(s) 2006
PspGI CCWGG 3 cut(s) 910, 1918, 2139
PspN4I GGNNCC 4 cut(s) 126, 1235, 2186, 2529
PspPI GGNCC 4 cut(s) 124, 1463, 2291, 2527
PspXI VCTCGAGB 1 cut(s) 1094
PstI CTGCAG 1 cut(s) 282
PstNI CAGNNNCTG 1 cut(s) 586
PvuII CAGCTG 2 cut(s) 1938, 2236
RsaI GTAC 6 cut(s) 51, 1100, 1951, 2069, 2273, 2522
RsaNI GTAC 6 cut(s) 50, 1099, 1950, 2068, 2272, 2521
RseI CAYNNNNRTG 2 cut(s) 1788, 2753
SalI GTCGAC 1 cut(s) 1508
SapI GCTCTTC 1 cut(s) 1768
SaqAI TTAA 6 cut(s) 65, 660, 777, 1520, 1689, 2114
Sau3AI GATC 6 cut(s) 99, 337, 399, 2130, 2382, 2757
Sau96I GGNCC 4 cut(s) 124, 1463, 2291, 2527
ScaI AGTACT 1 cut(s) 1951
SchI GAGTC 8 cut(s) 222, 288, 491, 779, 995, 2070, 2215, 2441
SduI GDGCHC 3 cut(s) 1421, 2014, 2515
SexAI ACCWGGT 1 cut(s) 1918
SfaNI GCATC 3 cut(s) 1981, 2377, 2496
SfcI CTRYAG 2 cut(s) 278, 1473
Sfr274I CTCGAG 1 cut(s) 1094
SinI GGWCC 2 cut(s) 124, 2291
SlaI CTCGAG 1 cut(s) 1094
SmaI CCCGGG 1 cut(s) 697
SmiMI CAYNNNNRTG 2 cut(s) 1788, 2753
SmlI CTYRAG 7 cut(s) 938, 1094, 1297, 1355, 2122, 2491, 2681
SmoI CTYRAG 7 cut(s) 938, 1094, 1297, 1355, 2122, 2491, 2681
SpeI ACTAGT 1 cut(s) 52
SsiI CCGC 4 cut(s) 512, 1882, 1913, 2620
SspI AATATT 1 cut(s) 2410
SspMI CTAG 3 cut(s) 20, 53, 1019
StyI CCWWGG 1 cut(s) 865
TaaI ACNGT 6 cut(s) 263, 1864, 2036, 2077, 2119, 2551
TaiI ACGT 2 cut(s) 90, 1509
TaqI TCGA 5 cut(s) 398, 527, 773, 1095, 1509
TatI WGTACW 5 cut(s) 49, 1098, 1949, 2067, 2271
TauI GCSGC 1 cut(s) 2623
TfiI GAWTC 6 cut(s) 529, 673, 763, 1955, 2278, 2653
Tru1I TTAA 6 cut(s) 65, 660, 777, 1520, 1689, 2114
Tru9I TTAA 6 cut(s) 65, 660, 777, 1520, 1689, 2114
TscAI CASTG 8 cut(s) 325, 438, 963, 976, 996, 1623, 1756, 2760
TseFI GTSAC 8 cut(s) 3, 429, 987, 1227, 1781, 2197, 2608, 2660
TseI GCWGC 9 cut(s) 277, 1121, 1369, 1826, 1829, 2003, 2233, 2236, 2496
Tsp45I GTSAC 8 cut(s) 3, 429, 987, 1227, 1781, 2197, 2608, 2660
TspDTI ATGAA 9 cut(s) 611, 639, 906, 978, 1047, 1686, 1825, 2262, 2390
TspGWI ACGGA 3 cut(s) 1246, 1656, 2304
TspMI CCCGGG 1 cut(s) 695
TspRI CASTG 8 cut(s) 325, 438, 963, 976, 996, 1623, 1756, 2760
VneI GTGCAC 1 cut(s) 2511
VpaK11BI GGWCC 2 cut(s) 124, 2291
XagI CCTNNNNNAGG 1 cut(s) 2853
XapI RAATTY 5 cut(s) 474, 906, 949, 965, 1738
XbaI TCTAGA 1 cut(s) 1018
XceI RCATGY 2 cut(s) 257, 1880
XcmI CCANNNNNNNNNTGG 2 cut(s) 558, 2513
XhoI CTCGAG 1 cut(s) 1094
XmaI CCCGGG 1 cut(s) 695
XmiI GTMKAC 2 cut(s) 1509, 2478
XmnI GAANNNNTTC 2 cut(s) 965, 1793
XspI CTAG 3 cut(s) 20, 53, 1019
ZrmI AGTACT 1 cut(s) 1951
Zsp2I ATGCAT 2 cut(s) 1168, 1878
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.