Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0009915

Physical Location & Seq

Genomic Coordinates Forward (+)

7950908 .. 7954908

Gene Structure 4001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G008570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGTTAGATTTATCTTGTAATAACTTTTCTGGTGGCATTCCTGGTTCATTAGGAAATCTAAGGCTACTTGAGAAGTTGAATTTATCTATGAATGGATTTACTGGGAGCTTGCCTGAGTCGTTGACAAATTGTTTCAACCTTCTAGCTCTAGATGTTAGCCGAAATCAGTTGGTTGGTAAACTTCCTTCATGGATTTTGAAGCTTGGTGTGGGACGTGGAAGGCTCGAGTACAATCCATTGAGACCAATAGCTGCCTCTCGTGGACGTCTTCAGGTCTTGGATTTGTCTTCCAATGCATTTTCTGATGTGCTTCCATCTGATATTGGGGTTCTTAGTAGCTTGCAGTTCTTGAATGTGTCCCGGAATCAGCTCCTTGGTACTATTCCTCTAAGTATAGGTAATTTGACGTCAGCATATGTTCTGGACTTGAGCAACAATTGGCTGAATGGAAGCATTCCTTCTGAAATTGGAGGAGCAGTCTCACTCAAGGAGCTAAGGCTGCACAAGAACTTTCTAACGGGGAAAGTTCCATCTCAGATTCAGAATTGCTCATCTCTATCATCGCTGTTGCTATCCCAGAACAATCTTACTGGCCCTGTTCCTGCAGCCATTGCAAACCTTACCAACCTTCAATACGTCGACTTGTCTTTAAACCAATTCTCTGGGAGCTTGCCTAAAGAGTTGACAAATCTTTCCCACCTCCTCTACTTCAATGTATCCTACAATCACCTTCAGGGTGAGTTACCTGTGGGGGGCTTCTTCAACACAATCTCACCCTCATCTATCTCGGGCAATCCGTCCCTATGTGGTTCTGTTCTTAACCTTTCATGCCCTGCTGTTCACCCTAAACCCATTGTCCTCAACCCAAATTCTAACAGCACTGGTGGTGGTTCTTCCTCTCTGACTCATGGTCACAAGAATGTATTTAGCATATCTGCTCTCATTGCCATAGGTGCTGCTGCATTCATTGCAATTGGTGTTATAGCTGTTACCGTCCTCAATATGCACGTGCGGTCTTCAATGACACATTCTGCTCCTCTTCCACTACCTGGTGGGGAAGATTTCAGTTGTTCCCCAAGTACTGATTCAAAGTATGGCAAGCTTGTTATGTTTTCTGGTGATGCTGACTTTGCTGCTGGAGCCCAAGCCCTGCTGAACAAGGACTGTGAGCTTGGTCGTGGTGGCTTTGGAGTAGTTTACAGAACGGTCCTCAGAGATGGGCGTTCTGTTGCAATAAAAAAGTTGACAGTCTCAAGTTTGATCAAGTCCCAAGAAGATTTCGAGAGGGAAGTTAAAGGACTTGGAAAGATAAGGCACAATAATCTTGTGACACTTGAAGGGTATTACTGGACTCCTTCCTTGCAGCTGCTCATATATGAATACGTACCATGTGGAAGTCTGTATAAGAATCTCCATGATGGACCTGGACAAAGCGGTCTCTCTTGGCGACAGAGGTTCAACATAATTCTTGGGATGGCAAAGGGTTTGGCTCATCTGCATCGAATGAACTTGATTCACTACAACTTGAAATCAACTAATATTTTGATAGACAGCTCTGGTGAACCAAAAGTAGGAGACTTTAGTCTGGCAAGGCTGTTGCCAATGTTAGACCGGTGCATCTTGAGCAGCAAAATCCAAAGTGCACTTGGGTATATGGCGCCTGAGTTCGCTTGTCAAACTGTCAAGATTACTGAGAAATGTGATGTGTATGGGTACGGGGTCTTGGTTTTGGAGGTGGTGACCGGAAAGCGGCCTGTGGAATATATGGAAGATGATGTGGTGGTGCTCTGTGACATGGTGAGGGGGGCTCTAGAGGAAGGCAGGGTGGAAGAATGTCTTGACAGAAAACTTCTGGGTAATTATCCGGCAGAGGAGGCAATTCCAGTGATCAAGCTTGGTTTGATATGTGCATCACAAGTTCCATCAAATCGTCCTGATATGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

648

Amino Acids

69.81

Weight (kDa)

8.28

Isoelectric Point (pI)

38.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	387 - 594	1.1e-39	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	388 - 591	6.9e-39	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01890
fragaria_vesca	FvH4_6g09840 FvH4_6g09840
malus_domestica	MD04G1174900.v1.1 MD12G1188600.v1.1
prunus_persica	Prupe.6G293900_v2.0.a1 Prupe.6G293900_v2.0.a1 Prupe.6G293900_v2.0.a1
pyrus_communis	pycom04g15430 pycom12g17620
rosa_chinensis	RchiOBHm_Chr3g0460441
rosa_laevigata	RLG00000025011
rosa_multiflora	Rmu_sc0004267.1_g000010
rosa_roxburghii	Rroxscaffold_6G00419480
rosa_rugosa	Rorug03G0042600 Rorug03G0042600
rosa_samantha	Rh3AG100700 Rh3BG104700 Rh3CG106500 Rh3DG106000
rosa_wichuraiana	Rw3G008570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1434
AatII	GACGTC	2 cut(s)	268, 410
AccB1I	GGYRCC	1 cut(s)	1657
AccB7I	CCANNNNNTGG	1 cut(s)	1049
AccI	GTMKAC	1 cut(s)	639
AciI	CCGC	3 cut(s)	1012, 1434, 1750
AcsI	RAATTY	2 cut(s)	79, 868
AcuI	CTGAAG	2 cut(s)	254, 716
AcvI	CACGTG	1 cut(s)	1009
AcyI	GRCGYC	3 cut(s)	265, 407, 1658
AfaI	GTAC	5 cut(s)	230, 379, 1081, 1386, 1715
AfiI	CCNNNNNNNGG	4 cut(s)	752, 1049, 1571, 1749
AgeI	ACCGGT	1 cut(s)	1611
AhdI	GACNNNNNGTC	1 cut(s)	909
AjiI	CACGTC	1 cut(s)	215
AjnI	CCWGG	3 cut(s)	40, 1048, 1423
AjuI	GAANNNNNNNTTGG	2 cut(s)	1069, 1101
Alw21I	GWGCWC	2 cut(s)	1645, 1788
Alw26I	GTCTC	5 cut(s)	235, 484, 1255, 1442, 1569
Alw44I	GTGCAC	1 cut(s)	1641
Ama87I	CYCGRG	2 cut(s)	224, 787
AoxI	GGCC	2 cut(s)	592, 1751
ApaLI	GTGCAC	1 cut(s)	1641
ApeKI	GCWGC	9 cut(s)	251, 499, 605, 956, 959, 1133, 1363, 1366, 1626
ApoI	RAATTY	2 cut(s)	79, 868
AsiGI	ACCGGT	1 cut(s)	1611
AspLEI	GCGC	1 cut(s)	1660
AspS9I	GGNCC	3 cut(s)	593, 1207, 1421
AsuC2I	CCSGG	1 cut(s)	361
AsuHPI	GGTGA	8 cut(s)	719, 749, 765, 833, 1130, 1571, 1750, 1810
AvaI	CYCGRG	2 cut(s)	224, 787
AvaII	GGWCC	2 cut(s)	1207, 1421
BaeGI	GKGCMC	1 cut(s)	1645
BanI	GGYRCC	1 cut(s)	1657
BanII	GRGCYC	2 cut(s)	1144, 1810
BarI	GAAGNNNNNNTAC	2 cut(s)	169, 201
BauI	CACGAG	1 cut(s)	258
BbrPI	CACGTG	1 cut(s)	1009
BbsI	GAAGAC	3 cut(s)	260, 279, 1008
Bbv12I	GWGCWC	2 cut(s)	1645, 1788
BbvI	GCAGC	9 cut(s)	238, 486, 617, 943, 946, 1120, 1353, 1375, 1638
BccI	CCATC	6 cut(s)	322, 538, 1211, 1412, 1468, 1930
BciT130I	CCWGG	3 cut(s)	42, 1050, 1425
BciVI	GTATCC	1 cut(s)	727
BclI	TGATCA	2 cut(s)	1260, 1887
BcnI	CCSGG	1 cut(s)	361
BcoDI	GTCTC	5 cut(s)	235, 484, 1255, 1442, 1569
BfaI	CTAG	3 cut(s)	143, 149, 1811
BfmI	CTRYAG	1 cut(s)	603
BfoI	RGCGCY	1 cut(s)	1661
BfuI	GTATCC	1 cut(s)	727
BmcAI	AGTACT	1 cut(s)	1081
Bme1390I	CCNGG	4 cut(s)	42, 361, 1050, 1425
Bme18I	GGWCC	2 cut(s)	1207, 1421
BmeRI	GACNNNNNGTC	1 cut(s)	909
BmeT110I	CYCGRG	2 cut(s)	224, 787
BmgBI	CACGTC	1 cut(s)	215
BmgT120I	GGNCC	3 cut(s)	593, 1207, 1421
BmiI	GGNNCC	2 cut(s)	1141, 1659
BmrFI	CCNGG	4 cut(s)	42, 361, 1050, 1425
BmrI	ACTGGG	1 cut(s)	111
BmsI	GCATC	4 cut(s)	1111, 1507, 1626, 1919
BmuI	ACTGGG	1 cut(s)	111
BoxI	GACNNNNGTC	1 cut(s)	1581
BpiI	GAAGAC	3 cut(s)	260, 279, 1008
BplI	GAGNNNNNCTC	2 cut(s)	1792, 1824
BpmI	CTGGAG	1 cut(s)	1158
Bpu10I	CCTNAGC	1 cut(s)	494
BpuEI	CTTGAG	5 cut(s)	89, 448, 470, 1237, 1642
BpuMI	CCSGG	1 cut(s)	361
BsaAI	YACGTR	2 cut(s)	1009, 1384
BsaHI	GRCGYC	3 cut(s)	265, 407, 1658
BsaI	GGTCTC	2 cut(s)	235, 1442
BsaJI	CCNNGG	1 cut(s)	373
BsaWI	WCCGGW	2 cut(s)	1611, 1742
BsaXI	ACNNNNNCTCC	2 cut(s)	462, 492
Bsc4I	CCNNNNNNNGG	4 cut(s)	752, 1049, 1571, 1749
Bse118I	RCCGGY	1 cut(s)	1611
Bse1I	ACTGG	5 cut(s)	106, 595, 886, 1352, 1883
Bse3DI	GCAATG	3 cut(s)	609, 942, 966
BseBI	CCWGG	3 cut(s)	42, 1050, 1425
BseDI	CCNNGG	1 cut(s)	373
BseGI	GGATG	1 cut(s)	1479
BseLI	CCNNNNNNNGG	4 cut(s)	752, 1049, 1571, 1749
BseMI	GCAATG	3 cut(s)	609, 942, 966
BseMII	CTCAG	5 cut(s)	105, 548, 1225, 1653, 1683
BseNI	ACTGG	5 cut(s)	106, 595, 886, 1352, 1883
BseRI	GAGGAG	4 cut(s)	486, 692, 1026, 1886
BseSI	GKGCMC	1 cut(s)	1645
BseXI	GCAGC	9 cut(s)	238, 486, 617, 943, 946, 1120, 1353, 1375, 1638
BsgI	GTGCAG	1 cut(s)	485
BshFI	GGCC	2 cut(s)	594, 1753
BshNI	GGYRCC	1 cut(s)	1657
BshTI	ACCGGT	1 cut(s)	1611
BsiHKAI	GWGCWC	2 cut(s)	1645, 1788
BsiHKCI	CYCGRG	2 cut(s)	224, 787
BsiSI	CCGG	4 cut(s)	361, 1612, 1743, 1865
BslFI	GGGAC	4 cut(s)	225, 343, 784, 1252
BslI	CCNNNNNNNGG	4 cut(s)	752, 1049, 1571, 1749
BsmAI	GTCTC	5 cut(s)	235, 484, 1255, 1442, 1569
BsmFI	GGGAC	4 cut(s)	225, 343, 784, 1252
BsmI	GAATGC	3 cut(s)	36, 453, 962
BsnI	GGCC	2 cut(s)	594, 1753
Bso31I	GGTCTC	2 cut(s)	235, 1442
BsoBI	CYCGRG	2 cut(s)	224, 787
Bsp1286I	GDGCHC	4 cut(s)	1144, 1645, 1788, 1810
Bsp143I	GATC	2 cut(s)	1260, 1887
BspACI	CCGC	3 cut(s)	1012, 1434, 1750
BspANI	GGCC	2 cut(s)	594, 1753
BspCNI	CTCAG	5 cut(s)	106, 547, 1224, 1654, 1684
BspLI	GGNNCC	2 cut(s)	1141, 1659
BspMAI	CTGCAG	1 cut(s)	607
BspT107I	GGYRCC	1 cut(s)	1657
BspTNI	GGTCTC	2 cut(s)	235, 1442
BsrDI	GCAATG	3 cut(s)	609, 942, 966
BsrFI	RCCGGY	1 cut(s)	1611
BsrI	ACTGG	5 cut(s)	106, 595, 886, 1352, 1883
BssAI	RCCGGY	1 cut(s)	1611
BssECI	CCNNGG	1 cut(s)	373
BssMI	GATC	2 cut(s)	1260, 1887
BssNI	GRCGYC	3 cut(s)	265, 407, 1658
BssSI	CACGAG	1 cut(s)	258
BssT1I	CCWWGG	1 cut(s)	373
Bst2BI	CACGAG	1 cut(s)	258
Bst2UI	CCWGG	3 cut(s)	42, 1050, 1425
Bst4CI	ACNGT	5 cut(s)	994, 1166, 1207, 1249, 1681
Bst6I	CTCTTC	1 cut(s)	1044
BstACI	GRCGYC	3 cut(s)	265, 407, 1658
BstAPI	GCANNNNNTGC	2 cut(s)	611, 968
BstBAI	YACGTR	2 cut(s)	1009, 1384
BstC8I	GCNNGC	4 cut(s)	110, 341, 671, 1100
BstDEI	CTNAG	9 cut(s)	59, 114, 332, 389, 494, 534, 1211, 1662, 1692
BstEII	GGTNACC	1 cut(s)	1738
BstF5I	GGATG	1 cut(s)	1479
BstH2I	RGCGCY	1 cut(s)	1661
BstHHI	GCGC	1 cut(s)	1660
BstKTI	GATC	2 cut(s)	1263, 1890
BstMAI	GTCTC	5 cut(s)	235, 484, 1255, 1442, 1569
BstMBI	GATC	2 cut(s)	1260, 1887
BstMWI	GCNNNNNNNGC	9 cut(s)	499, 611, 944, 953, 968, 1130, 1139, 1623, 1874
BstNI	CCWGG	3 cut(s)	42, 1050, 1425
BstPAI	GACNNNNGTC	1 cut(s)	1581
BstPI	GGTNACC	1 cut(s)	1738
BstSCI	CCNGG	4 cut(s)	40, 359, 1048, 1423
BstSFI	CTRYAG	1 cut(s)	603
BstSLI	GKGCMC	1 cut(s)	1645
BstSNI	TACGTA	1 cut(s)	1384
BstV1I	GCAGC	9 cut(s)	238, 486, 617, 943, 946, 1120, 1353, 1375, 1638
BstV2I	GAAGAC	3 cut(s)	260, 279, 1008
BstXI	CCANNNNNNTGG	1 cut(s)	662
BsuI	GTATCC	1 cut(s)	727
BsuRI	GGCC	2 cut(s)	594, 1753
BtgZI	GCGATG	1 cut(s)	546
BtrI	CACGTC	1 cut(s)	215
BtsCI	GGATG	1 cut(s)	1479
BtsIMutI	CAGTG	2 cut(s)	879, 1890
Cac8I	GCNNGC	4 cut(s)	110, 341, 671, 1100
CfoI	GCGC	1 cut(s)	1660
Cfr10I	RCCGGY	1 cut(s)	1611
Cfr13I	GGNCC	3 cut(s)	593, 1207, 1421
CsiI	ACCWGGT	1 cut(s)	1048
Csp6I	GTAC	5 cut(s)	229, 378, 1080, 1385, 1714
CspAI	ACCGGT	1 cut(s)	1611
CviAII	CATG	6 cut(s)	189, 828, 908, 1389, 1415, 1795
CviQI	GTAC	5 cut(s)	229, 378, 1080, 1385, 1714
DdeI	CTNAG	9 cut(s)	59, 114, 332, 389, 494, 534, 1211, 1662, 1692
DinI	GGCGCC	1 cut(s)	1659
DpnI	GATC	2 cut(s)	1262, 1889
DpnII	GATC	2 cut(s)	1260, 1887
DraI	TTTAAA	1 cut(s)	651
DrdI	GACNNNNNNGTC	1 cut(s)	1434
DriI	GACNNNNNGTC	1 cut(s)	909
DseDI	GACNNNNNNGTC	1 cut(s)	1434
Eam1104I	CTCTTC	1 cut(s)	1044
Eam1105I	GACNNNNNGTC	1 cut(s)	909
EarI	CTCTTC	1 cut(s)	1044
Eco105I	TACGTA	1 cut(s)	1384
Eco130I	CCWWGG	1 cut(s)	373
Eco24I	GRGCYC	2 cut(s)	1144, 1810
Eco31I	GGTCTC	2 cut(s)	235, 1442
Eco47I	GGWCC	2 cut(s)	1207, 1421
Eco57I	CTGAAG	2 cut(s)	254, 716
Eco72I	CACGTG	1 cut(s)	1009
Eco88I	CYCGRG	2 cut(s)	224, 787
Eco91I	GGTNACC	1 cut(s)	1738
EcoO65I	GGTNACC	1 cut(s)	1738
EcoRII	CCWGG	3 cut(s)	40, 1048, 1423
EcoT14I	CCWWGG	1 cut(s)	373
EcoT22I	ATGCAT	1 cut(s)	298
EcoT38I	GRGCYC	2 cut(s)	1144, 1810
EgeI	GGCGCC	1 cut(s)	1659
EheI	GGCGCC	1 cut(s)	1659
ErhI	CCWWGG	1 cut(s)	373
FaeI	CATG	6 cut(s)	192, 831, 911, 1392, 1418, 1798
FalI	AAGNNNNNCTT	4 cut(s)	442, 474, 1821, 1853
FaqI	GGGAC	4 cut(s)	225, 343, 784, 1252
FatI	CATG	6 cut(s)	188, 827, 907, 1388, 1414, 1794
FauNDI	CATATG	1 cut(s)	415
FbaI	TGATCA	2 cut(s)	1260, 1887
FblI	GTMKAC	1 cut(s)	639
FokI	GGATG	1 cut(s)	1486
FriOI	GRGCYC	2 cut(s)	1144, 1810
FspBI	CTAG	3 cut(s)	143, 149, 1811
GlaI	GCGC	1 cut(s)	1659
GsuI	CTGGAG	1 cut(s)	1158
HaeII	RGCGCY	1 cut(s)	1661
HaeIII	GGCC	2 cut(s)	594, 1753
HapII	CCGG	4 cut(s)	361, 1612, 1743, 1865
HhaI	GCGC	1 cut(s)	1660
Hin1I	GRCGYC	3 cut(s)	265, 407, 1658
Hin1II	CATG	6 cut(s)	192, 831, 911, 1392, 1418, 1798
Hin6I	GCGC	1 cut(s)	1658
HinP1I	GCGC	1 cut(s)	1658
HincII	GTYRAC	4 cut(s)	123, 640, 684, 1245
HindII	GTYRAC	4 cut(s)	123, 640, 684, 1245
HindIII	AAGCTT	3 cut(s)	200, 1100, 1892
HinfI	GANTC	8 cut(s)	116, 364, 538, 904, 1085, 1351, 1408, 1513
HpaII	CCGG	4 cut(s)	361, 1612, 1743, 1865
HphI	GGTGA	8 cut(s)	719, 749, 765, 833, 1130, 1571, 1750, 1810
Hpy188I	TCNGA	7 cut(s)	304, 319, 463, 537, 543, 903, 1214
Hpy188III	TCNNGA	9 cut(s)	149, 349, 422, 1282, 1621, 1684, 1811, 1838, 1934
Hpy99I	CGWCG	1 cut(s)	641
HpyAV	CCTTC	9 cut(s)	149, 195, 213, 468, 638, 740, 1331, 1365, 1811
HpyCH4III	ACNGT	5 cut(s)	994, 1166, 1207, 1249, 1681
HpyCH4IV	ACGT	6 cut(s)	214, 265, 407, 636, 1008, 1383
HpyF10VI	GCNNNNNNNGC	9 cut(s)	499, 611, 944, 953, 968, 1130, 1139, 1623, 1874
HpyF3I	CTNAG	9 cut(s)	59, 114, 332, 389, 494, 534, 1211, 1662, 1692
HpySE526I	ACGT	6 cut(s)	214, 265, 407, 636, 1008, 1383
Hsp92I	GRCGYC	3 cut(s)	265, 407, 1658
Hsp92II	CATG	6 cut(s)	192, 831, 911, 1392, 1418, 1798
HspAI	GCGC	1 cut(s)	1658
KasI	GGCGCC	1 cut(s)	1657
Ksp22I	TGATCA	2 cut(s)	1260, 1887
Kzo9I	GATC	2 cut(s)	1260, 1887
LmnI	GCTCC	7 cut(s)	105, 375, 473, 490, 666, 1039, 1139
Lsp1109I	GCAGC	9 cut(s)	238, 486, 617, 943, 946, 1120, 1353, 1375, 1638
LweI	GCATC	4 cut(s)	1111, 1507, 1626, 1919
MabI	ACCWGGT	1 cut(s)	1048
MaeI	CTAG	3 cut(s)	143, 149, 1811
MaeII	ACGT	6 cut(s)	214, 265, 407, 636, 1008, 1383
MaeIII	GTNAC	6 cut(s)	741, 911, 988, 1327, 1738, 1790
MalI	GATC	2 cut(s)	1262, 1889
MboI	GATC	2 cut(s)	1260, 1887
MfeI	CAATTG	2 cut(s)	436, 972
MhlI	GDGCHC	4 cut(s)	1144, 1645, 1788, 1810
Mly113I	GGCGCC	1 cut(s)	1658
MlyI	GAGTC	3 cut(s)	125, 898, 1345
Mph1103I	ATGCAT	1 cut(s)	298
MseI	TTAA	3 cut(s)	650, 819, 1293
MslI	CAYNNNNRTG	1 cut(s)	918
MspA1I	CMGCKG	1 cut(s)	1366
MspI	CCGG	4 cut(s)	361, 1612, 1743, 1865
MspR9I	CCNGG	4 cut(s)	42, 361, 1050, 1425
MunI	CAATTG	2 cut(s)	436, 972
Mva1269I	GAATGC	3 cut(s)	36, 453, 962
MvaI	CCWGG	3 cut(s)	42, 1050, 1425
MwoI	GCNNNNNNNGC	9 cut(s)	499, 611, 944, 953, 968, 1130, 1139, 1623, 1874
NarI	GGCGCC	1 cut(s)	1658
NciI	CCSGG	1 cut(s)	361
NdeI	CATATG	1 cut(s)	415
NdeII	GATC	2 cut(s)	1260, 1887
NlaIII	CATG	6 cut(s)	192, 831, 911, 1392, 1418, 1798
NlaIV	GGNNCC	2 cut(s)	1141, 1659
NmuCI	GTSAC	4 cut(s)	911, 1327, 1738, 1790
NsiI	ATGCAT	1 cut(s)	298
PaeR7I	CTCGAG	1 cut(s)	224
PcsI	WCGNNNNNNNCGW	1 cut(s)	794
PctI	GAATGC	3 cut(s)	36, 453, 962
PfeI	GAWTC	5 cut(s)	364, 538, 1085, 1408, 1513
PflMI	CCANNNNNTGG	1 cut(s)	1049
PfoI	TCCNGGA	1 cut(s)	359
PinAI	ACCGGT	1 cut(s)	1611
PleI	GAGTC	3 cut(s)	124, 898, 1345
PluTI	GGCGCC	1 cut(s)	1661
PmaCI	CACGTG	1 cut(s)	1009
PmlI	CACGTG	1 cut(s)	1009
PpsI	GAGTC	3 cut(s)	124, 898, 1345
Ppu21I	YACGTR	2 cut(s)	1009, 1384
PshAI	GACNNNNGTC	1 cut(s)	1581
Psp6I	CCWGG	3 cut(s)	40, 1048, 1423
PspCI	CACGTG	1 cut(s)	1009
PspEI	GGTNACC	1 cut(s)	1738
PspGI	CCWGG	3 cut(s)	40, 1048, 1423
PspN4I	GGNNCC	2 cut(s)	1141, 1659
PspPI	GGNCC	3 cut(s)	593, 1207, 1421
PspXI	VCTCGAGB	1 cut(s)	224
PstI	CTGCAG	1 cut(s)	607
PvuII	CAGCTG	1 cut(s)	1366
RsaI	GTAC	5 cut(s)	230, 379, 1081, 1386, 1715
RsaNI	GTAC	5 cut(s)	229, 378, 1080, 1385, 1714
RseI	CAYNNNNRTG	1 cut(s)	918
SalI	GTCGAC	1 cut(s)	638
SaqAI	TTAA	3 cut(s)	650, 819, 1293
Sau3AI	GATC	2 cut(s)	1260, 1887
Sau96I	GGNCC	3 cut(s)	593, 1207, 1421
ScaI	AGTACT	1 cut(s)	1081
SchI	GAGTC	3 cut(s)	125, 898, 1345
ScrFI	CCNGG	4 cut(s)	42, 361, 1050, 1425
SduI	GDGCHC	4 cut(s)	1144, 1645, 1788, 1810
SexAI	ACCWGGT	1 cut(s)	1048
SfaNI	GCATC	4 cut(s)	1111, 1507, 1626, 1919
SfcI	CTRYAG	1 cut(s)	603
SfoI	GGCGCC	1 cut(s)	1659
Sfr274I	CTCGAG	1 cut(s)	224
SinI	GGWCC	2 cut(s)	1207, 1421
SlaI	CTCGAG	1 cut(s)	224
SmiMI	CAYNNNNRTG	1 cut(s)	918
SmlI	CTYRAG	6 cut(s)	68, 224, 427, 485, 1252, 1621
SmoI	CTYRAG	6 cut(s)	68, 224, 427, 485, 1252, 1621
SnaBI	TACGTA	1 cut(s)	1384
SsiI	CCGC	3 cut(s)	1012, 1434, 1750
SspDI	GGCGCC	1 cut(s)	1657
SspI	AATATT	1 cut(s)	1540
SspMI	CTAG	3 cut(s)	143, 149, 1811
StyD4I	CCNGG	4 cut(s)	40, 359, 1048, 1423
StyI	CCWWGG	1 cut(s)	373
TaaI	ACNGT	5 cut(s)	994, 1166, 1207, 1249, 1681
TaiI	ACGT	6 cut(s)	217, 268, 410, 639, 1011, 1386
TaqI	TCGA	4 cut(s)	225, 639, 1281, 1501
TatI	WGTACW	2 cut(s)	228, 1079
TauI	GCSGC	1 cut(s)	1753
TfiI	GAWTC	5 cut(s)	364, 538, 1085, 1408, 1513
Tru1I	TTAA	3 cut(s)	650, 819, 1293
Tru9I	TTAA	3 cut(s)	650, 819, 1293
TscAI	CASTG	2 cut(s)	886, 1890
TseFI	GTSAC	4 cut(s)	911, 1327, 1738, 1790
TseI	GCWGC	9 cut(s)	251, 499, 605, 956, 959, 1133, 1363, 1366, 1626
Tsp45I	GTSAC	4 cut(s)	911, 1327, 1738, 1790
TspDTI	ATGAA	7 cut(s)	36, 104, 177, 816, 955, 1392, 1520
TspGWI	ACGGA	1 cut(s)	786
TspRI	CASTG	2 cut(s)	886, 1890
Van91I	CCANNNNNTGG	1 cut(s)	1049
VneI	GTGCAC	1 cut(s)	1641
VpaK11BI	GGWCC	2 cut(s)	1207, 1421
XapI	RAATTY	2 cut(s)	79, 868
XbaI	TCTAGA	2 cut(s)	148, 1810
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1421, 1643
XhoI	CTCGAG	1 cut(s)	224
XmiI	GTMKAC	1 cut(s)	639
XspI	CTAG	3 cut(s)	143, 149, 1811
ZraI	GACGTC	2 cut(s)	266, 408
ZrmI	AGTACT	1 cut(s)	1081
Zsp2I	ATGCAT	1 cut(s)	298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.