Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0009915

Physical Location & Seq

Genomic Coordinates Reverse (-)

20010851 .. 20014073

Gene Structure 3223 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g17620.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2898 bp

ATGGCGTTCGAGCTCTGTTTTCTCCTTCTTCTTGCTCCTCTTCTGGTACTCGCCCTAGACCCCGCTTTTAATGACGACGTTTTGGGGCTGATCGTCTTCAAGGCCGGGCTTTCTGACCCGGAAGCGAAGCTTGCTTCGTGGAGCGAGGACGACGGCAGTCCCTGCAACTGGGCCGGCGTCAAATGTGACCCGACAACCGGCAGAGTCGCCGAGGTTGTTCTTGATGGCTTTTCGCTGTCCGGGCACATCGGCCGCGGCCTTCTGCGGCTGCAGAACCTTCAAAAACTCTCGCTTTCCGACAACAACTTCACTGGGTTCATAAACCCTGATCTCCCACACCTCGGCAGCTTGCGGGTTATCGATTTGAGCCGGAACAGCCTATCTGGGTCGATCCCGGAGGAGTTCTTCAAGCAATGTGGATCCCTCAGGGTGGTTTCTTTCGCCGGAAACAACCTCACGGGGCGGATTCCGGAGTCCCTGAGCTTGTGCCAGACCTTGGTGGAGGTGAACTTTTCATCGAATTGGCTGTCTGGGAAATTGCCTACTGGGATTTGGTACTTGAGAATGCTTCAATCAATCGACTTGTCGGATAACTTGCTGGAGGGACAAGTTCCTGAAGATATGGAGAATTTGTATGATTTGAGAGTGATCAACTTGGGGGAAAACCGGTTTTCAGGACAGCTTCCAGGGAACATTGGAAGCTGTTTGCAGTTGAAGTTGCTTGATTTTAGTGATAATTTGTTTTCTGGGAGAATCCCGGATTCAATTCAGAGTCTCAATTCATGTACATCTCTGAGTTTACAGGGGAATTTTCTTGCGGGGCAAGTTCCGAATTGGCTTGGCGGTTTGAAAAACCTTGTGATGTTAGATGTGTCTGGAAATAATTTATCTGGTGAAATTCCAAGTTCGTTAGGACATCTAGAGGTGCTCGAAAAGTTGAATTTGTCTAGGAATGGATTTACTGGAAGCTTGCCTGATGCATTGGCAAACTGCATCAATCTGTTAGCTATAGATGTTAGCCATAATCTGTTGGCAGGTAAGCTTCCTTCGTGGATTTTTAAGCTTGGTCTGCGCAGTGTTTTGCTTTCTGGCAACCGATTAGGTGGAAGTGAGGAGTACAGTTCATTGGCGTCAATGGCAGCATCGAATGGAGGCCTGCAGGTCTTGGATTTGTCTTCGAACGCATTTTCTGATGTGCTTCCATCCGACATTGGTGTTCTTAGTAACTTGCAGTTCCTGAATATGTCTGGGAACCATCTGTTGGGTTGGATTCCAGCAAGTATAGGTAAATTAAAGGCGGCTTATGTTCTCGACTTGAGTGACAATTGGCTAAGTGGAAGCATTCCTGATGAAATCGGAGGGGCAATCTCACTCAAGGAACTAAGGCTGCAGAAGAACTTTCTAACCGGGAAGGTTCCAGCCGAAATTGTGAAGTGCTCATCTCTGACAAATCTGATTTTATCTCAGAACAATCTGACTGGCCCTATTCCTACTGCCATTGCTAACCTTACCAATCTTCAATATGTCGACTTGTCTTTGAACAAATTCTCAGGAGGCATACCGAAAGAGCTGACAAATCTTTCCCATCTCCTCTACTTCAATGTCTCCCACAACCACCTAGAGGGTGAACTACCACTAGGGGGATTCTTCAACACTATCCCACCCTCATCTGTCTTGGGCAATCCATCTCTTTGTGGATCTGCTGTTAACCGTGCCTGCCCTTCCGTCCACCCCAAACCCATTGTCCTCAACCCTAATTCTTCCAATCCCGTCGGTGGTTCTTCCGCTCCAACTCATGGTCACAAGATCATATTCAGCATATCAGCCCTCATTGCTATAGGCGCAGCTGTATTTATTGTCATTGGTGTCATAGCTGTAACCATCCTCAACATGCATGCGCGGTCTTCATTATCACTGTCTGCTGCTCCTCTTGAGTTATCAGGCGGGGAAGATTATAGTTGTTCCCCGACTAATGATCCAAACTACGGCAAGCTTGTCATGTTTTCTGGTGATGCTGACTTTGCTGCTGGGACACAAGCCTTGCTCAACAAGGACTGCGAACTTGGTCGTGGTGGGTTTGGAGTAGTTTACAAAACAGCCCTTCGTGATGGGTGTTCTGTTGCGATAAAAAAGCTATCAGTCTCAAGTTTGATCAAGTCCCAAGAAGTTTTCGAGAGGGAAGTTAAGGGACTTGGAAAGATCAGGCACCGTAATCTTGTGGCACTTGAAGGCTATTACTGGACTCCGTCCTTGCAGCTCATCATTTATGAGTACATACCATGCGGGAGTCTATTTAAGAATCTGCATGACGGACCTGGCAAAACCTGTCTCACTTGGCGGCAGAGGTTCCACATAATTCTTGGGATGGCAAAGGGTTTGGCTCATCTGCACCAAATGAACATAATCCACTACAATTTAAAATCAACTAATGTTTTGATAGACAACAATGGTGAGGCTAAGGTGGGAGACATTGGCCTGGCAAGGCTGTTGCCAACACTAGACCGGTGCATCTTAAGCAGCAAAATCCAAAGCGCACTTGGATACATGGCGCCCGAGTTTGCATGTCAAACGGTTAAGATTACTGAGAAATGTGATGTCTACGGATTCGGGATCTTGGTTTTGGAGGTGGTGACTGGAAAGAGGCCTGTCGAATATATGGAGGATGATGTGATAGTACTCTGTGATATGGTGAGGGGAGCGCTGGAGGAAGGCCGGGTGGAGGAATGTCTGGACAAAAACCTCCTTGGCAACTTTCCAGCAGAGGAGGCAATTCCGGTGATCAAGCTGGGTTTGATATGCGCGTCTCAAGTGCCATCAAATCGCCCGGACATGAATGAAGCGATCAACATTTTAGAACTCATCCAATGCCCTTCAGAAGGCCAGGAGGAATTAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

966

Amino Acids

103.78

Weight (kDa)

5.32

Isoelectric Point (pI)

36.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009915)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01890
fragaria_vesca	FvH4_6g09840 FvH4_6g09840
malus_domestica	MD04G1174900.v1.1 MD12G1188600.v1.1
prunus_persica	Prupe.6G293900_v2.0.a1 Prupe.6G293900_v2.0.a1 Prupe.6G293900_v2.0.a1
pyrus_communis	pycom04g15430 pycom12g17620
rosa_chinensis	RchiOBHm_Chr3g0460441
rosa_laevigata	RLG00000025011
rosa_multiflora	Rmu_sc0004267.1_g000010
rosa_roxburghii	Rroxscaffold_6G00419480
rosa_rugosa	Rorug03G0042600 Rorug03G0042600
rosa_samantha	Rh3AG100700 Rh3BG104700 Rh3CG106500 Rh3DG106000
rosa_wichuraiana	Rw3G008570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1073
Acc36I	ACCTGC	2 cut(s)	1025, 1150
AccB1I	GGYRCC	2 cut(s)	2205, 2548
AccB7I	CCANNNNNTGG	3 cut(s)	496, 1261, 1796
AccBSI	CCGCTC	1 cut(s)	1787
AccI	GTMKAC	2 cut(s)	1527, 2598
AccII	CGCG	3 cut(s)	255, 1900, 2801
AccIII	TCCGGA	1 cut(s)	469
AclWI	GGATC	6 cut(s)	385, 414, 427, 1705, 1970, 2618
AcoI	YGGCCR	1 cut(s)	250
AcsI	RAATTY	5 cut(s)	628, 808, 897, 940, 1544
AcuI	CTGAAG	2 cut(s)	636, 2856
AcyI	GRCGYC	3 cut(s)	177, 1130, 2549
AfaI	GTAC	6 cut(s)	48, 557, 787, 1118, 2273, 2676
AfeI	AGCGCT	1 cut(s)	2700
AflII	CTTAAG	1 cut(s)	2512
AgeI	ACCGGT	2 cut(s)	666, 2502
AjnI	CCWGG	4 cut(s)	685, 2314, 2475, 2880
AjuI	GAANNNNNNNTTGG	2 cut(s)	1244, 1276
Alw21I	GWGCWC	3 cut(s)	15, 930, 1439
Alw26I	GTCTC	6 cut(s)	779, 1609, 2146, 2333, 2460, 2808
AlwI	GGATC	6 cut(s)	385, 414, 427, 1705, 1970, 2618
AlwNI	CAGNNNCTG	2 cut(s)	162, 1237
Ama87I	CYCGRG	1 cut(s)	2552
Aor13HI	TCCGGA	1 cut(s)	469
Aor51HI	AGCGCT	1 cut(s)	2700
ApeKI	GCWGC	9 cut(s)	268, 345, 1139, 1387, 1844, 1922, 2024, 2254, 2517
ApoI	RAATTY	5 cut(s)	628, 808, 897, 940, 1544
ArsI	GACNNNNNNTTYG	4 cut(s)	512, 544, 1728, 1760
AsiGI	ACCGGT	2 cut(s)	666, 2502
Asp700I	GAANNNNTTC	1 cut(s)	1544
AspLEI	GCGC	7 cut(s)	1074, 1844, 1900, 2534, 2551, 2701, 2801
AspS9I	GGNCC	3 cut(s)	171, 1481, 2312
AsuC2I	CCSGG	8 cut(s)	106, 119, 241, 395, 758, 1408, 2714, 2825
AsuHPI	GGTGA	8 cut(s)	517, 905, 1637, 2021, 2462, 2641, 2701, 2788
AsuII	TTCGAA	1 cut(s)	1178
AvaI	CYCGRG	1 cut(s)	2552
AvaII	GGWCC	1 cut(s)	2312
AxyI	CCTNAGG	1 cut(s)	425
BaeGI	GKGCMC	1 cut(s)	246
BamHI	GGATCC	1 cut(s)	419
BanI	GGYRCC	2 cut(s)	2205, 2548
BanII	GRGCYC	1 cut(s)	15
BarI	GAAGNNNNNNTAC	2 cut(s)	1030, 1062
BbsI	GAAGAC	3 cut(s)	88, 1167, 1896
Bbv12I	GWGCWC	3 cut(s)	15, 930, 1439
BbvI	GCAGC	9 cut(s)	255, 357, 1151, 1374, 1856, 1909, 2011, 2266, 2529
BccI	CCATC	9 cut(s)	218, 1210, 1263, 1593, 1693, 1889, 2102, 2359, 2821
BceAI	ACGGC	2 cut(s)	169, 2002
BciT130I	CCWGG	4 cut(s)	687, 2316, 2477, 2882
BciVI	GTATCC	1 cut(s)	2534
BclI	TGATCA	3 cut(s)	648, 2151, 2778
BcnI	CCSGG	8 cut(s)	106, 119, 241, 395, 758, 1408, 2714, 2825
BcoDI	GTCTC	6 cut(s)	779, 1609, 2146, 2333, 2460, 2808
BfaI	CTAG	6 cut(s)	56, 920, 948, 1619, 1637, 2498
BfmI	CTRYAG	5 cut(s)	269, 1008, 1157, 1388, 1836
BfoI	RGCGCY	2 cut(s)	2552, 2702
BfrI	CTTAAG	1 cut(s)	2512
BfuAI	ACCTGC	2 cut(s)	1025, 1150
BfuI	GTATCC	1 cut(s)	2534
BmcAI	AGTACT	1 cut(s)	2676
Bme18I	GGWCC	1 cut(s)	2312
BmeT110I	CYCGRG	1 cut(s)	2552
BmgT120I	GGNCC	3 cut(s)	171, 1481, 2312
BmiI	GGNNCC	6 cut(s)	421, 1253, 1416, 2207, 2348, 2550
BmrI	ACTGGG	3 cut(s)	178, 321, 555
BmsI	GCATC	5 cut(s)	967, 1002, 1151, 2002, 2517
BmuI	ACTGGG	3 cut(s)	178, 321, 555
BoxI	GACNNNNGTC	1 cut(s)	156
BpiI	GAAGAC	3 cut(s)	88, 1167, 1896
BpmI	CTGGAG	2 cut(s)	620, 2723
Bpu10I	CCTNAGC	2 cut(s)	479, 2457
Bpu14I	TTCGAA	1 cut(s)	1178
BpuEI	CTTGAG	6 cut(s)	580, 1336, 1358, 1952, 2128, 2790
BpuMI	CCSGG	8 cut(s)	106, 119, 241, 395, 758, 1408, 2714, 2825
Bsa29I	ATCGAT	1 cut(s)	360
BsaHI	GRCGYC	3 cut(s)	177, 1130, 2549
BsaJI	CCNNGG	6 cut(s)	210, 253, 340, 495, 686, 2743
BsaWI	WCCGGW	4 cut(s)	469, 666, 2502, 2773
BsaXI	ACNNNNNCTCC	2 cut(s)	617, 647
Bse118I	RCCGGY	4 cut(s)	173, 197, 666, 2502
Bse1I	ACTGG	7 cut(s)	173, 316, 550, 967, 1483, 2243, 2638
Bse21I	CCTNAGG	1 cut(s)	425
Bse3DI	GCAATG	3 cut(s)	419, 1497, 1830
BseAI	TCCGGA	1 cut(s)	469
BseBI	CCWGG	4 cut(s)	687, 2316, 2477, 2882
BseCI	ATCGAT	1 cut(s)	360
BseDI	CCNNGG	6 cut(s)	210, 253, 340, 495, 686, 2743
BseGI	GGATG	5 cut(s)	1202, 1881, 2370, 2668, 2859
BseMI	GCAATG	3 cut(s)	419, 1497, 1830
BseMII	CTCAG	6 cut(s)	439, 470, 785, 1478, 1563, 2574
BseNI	ACTGG	7 cut(s)	173, 316, 550, 967, 1483, 2243, 2638
BseRI	GAGGAG	6 cut(s)	27, 413, 1127, 1580, 1917, 2777
BseSI	GKGCMC	1 cut(s)	246
BseX3I	CGGCCG	1 cut(s)	250
BseXI	GCAGC	9 cut(s)	255, 357, 1151, 1374, 1856, 1909, 2011, 2266, 2529
BseYI	CCCAGC	2 cut(s)	2027, 2785
BsgI	GTGCAG	1 cut(s)	2372
Bsh1236I	CGCG	3 cut(s)	255, 1900, 2801
Bsh1285I	CGRYCG	1 cut(s)	253
BshNI	GGYRCC	2 cut(s)	2205, 2548
BshTI	ACCGGT	2 cut(s)	666, 2502
BshVI	ATCGAT	1 cut(s)	360
BsiEI	CGRYCG	1 cut(s)	253
BsiHKAI	GWGCWC	3 cut(s)	15, 930, 1439
BsiHKCI	CYCGRG	1 cut(s)	2552
BslFI	GGGAC	6 cut(s)	144, 460, 618, 2044, 2143, 2202
BsmAI	GTCTC	6 cut(s)	779, 1609, 2146, 2333, 2460, 2808
BsmBI	CGTCTC	1 cut(s)	2808
BsmFI	GGGAC	6 cut(s)	144, 460, 618, 2044, 2143, 2202
BsmI	GAATGC	2 cut(s)	570, 1341
BsoBI	CYCGRG	1 cut(s)	2552
Bsp119I	TTCGAA	1 cut(s)	1178
Bsp1286I	GDGCHC	4 cut(s)	15, 246, 930, 1439
Bsp13I	TCCGGA	1 cut(s)	469
Bsp1407I	TGTACA	1 cut(s)	785
BspCNI	CTCAG	6 cut(s)	438, 471, 786, 1477, 1562, 2575
BspDI	ATCGAT	1 cut(s)	360
BspEI	TCCGGA	1 cut(s)	469
BspFNI	CGCG	3 cut(s)	255, 1900, 2801
BspLI	GGNNCC	6 cut(s)	421, 1253, 1416, 2207, 2348, 2550
BspMAI	CTGCAG	3 cut(s)	273, 1161, 1392
BspMI	ACCTGC	2 cut(s)	1025, 1150
BspPI	GGATC	6 cut(s)	385, 414, 427, 1705, 1970, 2618
BspT104I	TTCGAA	1 cut(s)	1178
BspT107I	GGYRCC	2 cut(s)	2205, 2548
BspTI	CTTAAG	1 cut(s)	2512
BsrBI	CCGCTC	1 cut(s)	1787
BsrDI	GCAATG	3 cut(s)	419, 1497, 1830
BsrFI	RCCGGY	4 cut(s)	173, 197, 666, 2502
BsrGI	TGTACA	1 cut(s)	785
BsrI	ACTGG	7 cut(s)	173, 316, 550, 967, 1483, 2243, 2638
BssAI	RCCGGY	4 cut(s)	173, 197, 666, 2502
BssECI	CCNNGG	6 cut(s)	210, 253, 340, 495, 686, 2743
BssNI	GRCGYC	3 cut(s)	177, 1130, 2549
BssT1I	CCWWGG	2 cut(s)	495, 2743
Bst2UI	CCWGG	4 cut(s)	687, 2316, 2477, 2882
Bst4CI	ACNGT	5 cut(s)	1121, 1712, 1917, 2210, 2572
Bst6I	CTCTTC	1 cut(s)	45
BstACI	GRCGYC	3 cut(s)	177, 1130, 2549
BstAFI	CTTAAG	1 cut(s)	2512
BstAPI	GCANNNNNTGC	1 cut(s)	162
BstAUI	TGTACA	1 cut(s)	785
BstBI	TTCGAA	1 cut(s)	1178
BstC8I	GCNNGC	8 cut(s)	132, 175, 350, 971, 1157, 1717, 1896, 1991
BstDSI	CCRYGG	1 cut(s)	253
BstENI	CCTNNNNNAGG	1 cut(s)	2874
BstF5I	GGATG	5 cut(s)	1202, 1881, 2370, 2668, 2859
BstFNI	CGCG	3 cut(s)	255, 1900, 2801
BstH2I	RGCGCY	2 cut(s)	2552, 2702
BstHHI	GCGC	7 cut(s)	1074, 1844, 1900, 2534, 2551, 2701, 2801
BstMAI	GTCTC	6 cut(s)	779, 1609, 2146, 2333, 2460, 2808
BstMCI	CGRYCG	1 cut(s)	253
BstNI	CCWGG	4 cut(s)	687, 2316, 2477, 2882
BstNSI	RCATGY	3 cut(s)	1894, 1898, 2565
BstPAI	GACNNNNGTC	1 cut(s)	156
BstSFI	CTRYAG	5 cut(s)	269, 1008, 1157, 1388, 1836
BstSLI	GKGCMC	1 cut(s)	246
BstUI	CGCG	3 cut(s)	255, 1900, 2801
BstV1I	GCAGC	9 cut(s)	255, 357, 1151, 1374, 1856, 1909, 2011, 2266, 2529
BstV2I	GAAGAC	3 cut(s)	88, 1167, 1896
BstX2I	RGATCY	3 cut(s)	419, 1697, 2610
BstYI	RGATCY	3 cut(s)	419, 1697, 2610
BstZI	CGGCCG	1 cut(s)	250
Bsu15I	ATCGAT	1 cut(s)	360
Bsu36I	CCTNAGG	1 cut(s)	425
BsuI	GTATCC	1 cut(s)	2534
BsuTUI	ATCGAT	1 cut(s)	360
BtgI	CCRYGG	1 cut(s)	253
BtsCI	GGATG	5 cut(s)	1202, 1881, 2370, 2668, 2859
BtsI	GCAGTG	1 cut(s)	1081
BtsIMutI	CAGTG	3 cut(s)	309, 1081, 1913
BveI	ACCTGC	2 cut(s)	1025, 1150
Cac8I	GCNNGC	8 cut(s)	132, 175, 350, 971, 1157, 1717, 1896, 1991
CaiI	CAGNNNCTG	2 cut(s)	162, 1237
CfoI	GCGC	7 cut(s)	1074, 1844, 1900, 2534, 2551, 2701, 2801
Cfr10I	RCCGGY	4 cut(s)	173, 197, 666, 2502
Cfr13I	GGNCC	3 cut(s)	171, 1481, 2312
Cfr42I	CCGCGG	1 cut(s)	256
ClaI	ATCGAT	1 cut(s)	360
CseI	GACGC	3 cut(s)	166, 1119, 2790
Csp6I	GTAC	6 cut(s)	47, 556, 786, 1117, 2272, 2675
CspAI	ACCGGT	2 cut(s)	666, 2502
CspCI	CAANNNNNGTGG	2 cut(s)	397, 432
CviQI	GTAC	6 cut(s)	47, 556, 786, 1117, 2272, 2675
DinI	GGCGCC	1 cut(s)	2550
DraI	TTTAAA	1 cut(s)	2418
EaeI	YGGCCR	1 cut(s)	250
EagI	CGGCCG	1 cut(s)	250
Eam1104I	CTCTTC	1 cut(s)	45
EarI	CTCTTC	1 cut(s)	45
EciI	GGCGGA	1 cut(s)	478
Ecl136II	GAGCTC	1 cut(s)	13
EclXI	CGGCCG	1 cut(s)	250
Eco130I	CCWWGG	2 cut(s)	495, 2743
Eco147I	AGGCCT	2 cut(s)	1155, 2644
Eco24I	GRGCYC	1 cut(s)	15
Eco47I	GGWCC	1 cut(s)	2312
Eco47III	AGCGCT	1 cut(s)	2700
Eco52I	CGGCCG	1 cut(s)	250
Eco53kI	GAGCTC	1 cut(s)	13
Eco57I	CTGAAG	2 cut(s)	636, 2856
Eco81I	CCTNAGG	1 cut(s)	425
Eco88I	CYCGRG	1 cut(s)	2552
EcoICRI	GAGCTC	1 cut(s)	13
EcoNI	CCTNNNNNAGG	1 cut(s)	2874
EcoRII	CCWGG	4 cut(s)	685, 2314, 2475, 2880
EcoT14I	CCWWGG	2 cut(s)	495, 2743
EcoT22I	ATGCAT	2 cut(s)	982, 1896
EcoT38I	GRGCYC	1 cut(s)	15
EgeI	GGCGCC	1 cut(s)	2550
EheI	GGCGCC	1 cut(s)	2550
ErhI	CCWWGG	2 cut(s)	495, 2743
Esp3I	CGTCTC	1 cut(s)	2808
FalI	AAGNNNNNCTT	2 cut(s)	114, 146
FaqI	GGGAC	6 cut(s)	144, 460, 618, 2044, 2143, 2202
FauI	CCCGC	5 cut(s)	70, 345, 811, 1937, 2276
FbaI	TGATCA	3 cut(s)	648, 2151, 2778
FblI	GTMKAC	2 cut(s)	1527, 2598
FokI	GGATG	5 cut(s)	1189, 1868, 2377, 2675, 2846
FriOI	GRGCYC	1 cut(s)	15
FspBI	CTAG	6 cut(s)	56, 920, 948, 1619, 1637, 2498
FspI	TGCGCA	1 cut(s)	1073
GlaI	GCGC	7 cut(s)	1073, 1843, 1899, 2533, 2550, 2700, 2800
GsaI	CCCAGC	2 cut(s)	2031, 2789
GsuI	CTGGAG	2 cut(s)	620, 2723
HaeII	RGCGCY	2 cut(s)	2552, 2702
HgaI	GACGC	3 cut(s)	166, 1119, 2790
HhaI	GCGC	7 cut(s)	1074, 1844, 1900, 2534, 2551, 2701, 2801
Hin1I	GRCGYC	3 cut(s)	177, 1130, 2549
Hin6I	GCGC	7 cut(s)	1072, 1842, 1898, 2532, 2549, 2699, 2799
HinP1I	GCGC	7 cut(s)	1072, 1842, 1898, 2532, 2549, 2699, 2799
HincII	GTYRAC	2 cut(s)	1528, 1708
HindII	GTYRAC	2 cut(s)	1528, 1708
HindIII	AAGCTT	5 cut(s)	128, 967, 1040, 1061, 1991
HpaI	GTTAAC	1 cut(s)	1708
HphI	GGTGA	8 cut(s)	517, 905, 1637, 2021, 2462, 2641, 2701, 2788
Hpy166II	GTNNAC	8 cut(s)	508, 800, 1528, 1628, 1708, 1729, 2089, 2599
Hpy8I	GTNNAC	8 cut(s)	508, 800, 1528, 1628, 1708, 1729, 2089, 2599
Hpy99I	CGWCG	3 cut(s)	80, 155, 1775
HpyCH4III	ACNGT	5 cut(s)	1121, 1712, 1917, 2210, 2572
HpyCH4IV	ACGT	1 cut(s)	78
HpySE526I	ACGT	1 cut(s)	78
Hsp92I	GRCGYC	3 cut(s)	177, 1130, 2549
HspAI	GCGC	7 cut(s)	1072, 1842, 1898, 2532, 2549, 2699, 2799
KasI	GGCGCC	1 cut(s)	2548
Kpn2I	TCCGGA	1 cut(s)	469
KroI	GCCGGC	1 cut(s)	173
KroNI	GCCGGC	1 cut(s)	175
Ksp22I	TGATCA	3 cut(s)	648, 2151, 2778
KspAI	GTTAAC	1 cut(s)	1708
KspI	CCGCGG	1 cut(s)	256
LmnI	GCTCC	5 cut(s)	40, 141, 1792, 1930, 2696
Lsp1109I	GCAGC	9 cut(s)	255, 357, 1151, 1374, 1856, 1909, 2011, 2266, 2529
LweI	GCATC	5 cut(s)	967, 1002, 1151, 2002, 2517
MaeI	CTAG	6 cut(s)	56, 920, 948, 1619, 1637, 2498
MaeII	ACGT	1 cut(s)	78
MaeIII	GTNAC	6 cut(s)	185, 1223, 1319, 1799, 1876, 2629
MbiI	CCGCTC	1 cut(s)	1787
MfeI	CAATTG	1 cut(s)	1324
MflI	RGATCY	3 cut(s)	419, 1697, 2610
MhlI	GDGCHC	4 cut(s)	15, 246, 930, 1439
Mly113I	GGCGCC	1 cut(s)	2549
MlyI	GAGTC	5 cut(s)	213, 482, 781, 2236, 2296
MmeI	TCCRAC	5 cut(s)	321, 567, 1230, 1247, 1814
Mph1103I	ATGCAT	2 cut(s)	982, 1896
MroI	TCCGGA	1 cut(s)	469
MroNI	GCCGGC	1 cut(s)	173
MroXI	GAANNNNTTC	1 cut(s)	1544
MseI	TTAA	9 cut(s)	69, 1059, 1292, 1707, 2184, 2295, 2417, 2513, 2574
MspA1I	CMGCKG	2 cut(s)	255, 1847
MspCI	CTTAAG	1 cut(s)	2512
MunI	CAATTG	1 cut(s)	1324
Mva1269I	GAATGC	2 cut(s)	570, 1341
MvaI	CCWGG	4 cut(s)	687, 2316, 2477, 2882
MvnI	CGCG	3 cut(s)	255, 1900, 2801
NaeI	GCCGGC	1 cut(s)	175
NarI	GGCGCC	1 cut(s)	2549
NciI	CCSGG	8 cut(s)	106, 119, 241, 395, 758, 1408, 2714, 2825
NgoMIV	GCCGGC	1 cut(s)	173
NlaIV	GGNNCC	6 cut(s)	421, 1253, 1416, 2207, 2348, 2550
NmeAIII	GCCGAG	2 cut(s)	235, 321
NmuCI	GTSAC	4 cut(s)	185, 1319, 1799, 2629
NsbI	TGCGCA	1 cut(s)	1073
NsiI	ATGCAT	2 cut(s)	982, 1896
NspI	RCATGY	3 cut(s)	1894, 1898, 2565
NspV	TTCGAA	1 cut(s)	1178
PaeI	GCATGC	1 cut(s)	1898
PceI	AGGCCT	2 cut(s)	1155, 2644
PctI	GAATGC	2 cut(s)	570, 1341
PdiI	GCCGGC	1 cut(s)	175
PdmI	GAANNNNTTC	1 cut(s)	1544
PfeI	GAWTC	7 cut(s)	466, 753, 761, 1270, 1644, 2299, 2604
PflFI	GACNNNGTC	1 cut(s)	2245
PflMI	CCANNNNNTGG	3 cut(s)	496, 1261, 1796
PfoI	TCCNGGA	2 cut(s)	393, 756
PinAI	ACCGGT	2 cut(s)	666, 2502
PleI	GAGTC	5 cut(s)	212, 481, 780, 2236, 2295
PluTI	GGCGCC	1 cut(s)	2552
PpsI	GAGTC	5 cut(s)	212, 481, 780, 2236, 2295
PshAI	GACNNNNGTC	1 cut(s)	156
Psp124BI	GAGCTC	1 cut(s)	15
Psp6I	CCWGG	4 cut(s)	685, 2314, 2475, 2880
PspFI	CCCAGC	2 cut(s)	2027, 2785
PspGI	CCWGG	4 cut(s)	685, 2314, 2475, 2880
PspN4I	GGNNCC	6 cut(s)	421, 1253, 1416, 2207, 2348, 2550
PspPI	GGNCC	3 cut(s)	171, 1481, 2312
PstI	CTGCAG	3 cut(s)	273, 1161, 1392
PstNI	CAGNNNCTG	2 cut(s)	162, 1237
PsuI	RGATCY	3 cut(s)	419, 1697, 2610
PsyI	GACNNNGTC	1 cut(s)	2245
PvuII	CAGCTG	1 cut(s)	1847
RsaI	GTAC	6 cut(s)	48, 557, 787, 1118, 2273, 2676
RsaNI	GTAC	6 cut(s)	47, 556, 786, 1117, 2272, 2675
SacI	GAGCTC	1 cut(s)	15
SacII	CCGCGG	1 cut(s)	256
SalI	GTCGAC	1 cut(s)	1526
SaqAI	TTAA	9 cut(s)	69, 1059, 1292, 1707, 2184, 2295, 2417, 2513, 2574
Sau96I	GGNCC	3 cut(s)	171, 1481, 2312
SbfI	CCTGCAGG	1 cut(s)	1161
ScaI	AGTACT	1 cut(s)	2676
SchI	GAGTC	5 cut(s)	213, 482, 781, 2236, 2296
SdaI	CCTGCAGG	1 cut(s)	1161
SduI	GDGCHC	4 cut(s)	15, 246, 930, 1439
SfaNI	GCATC	5 cut(s)	967, 1002, 1151, 2002, 2517
SfcI	CTRYAG	5 cut(s)	269, 1008, 1157, 1388, 1836
SfoI	GGCGCC	1 cut(s)	2550
Sfr303I	CCGCGG	1 cut(s)	256
SfuI	TTCGAA	1 cut(s)	1178
SgrBI	CCGCGG	1 cut(s)	256
SinI	GGWCC	1 cut(s)	2312
SmlI	CTYRAG	7 cut(s)	559, 1315, 1373, 1931, 2143, 2512, 2805
SmoI	CTYRAG	7 cut(s)	559, 1315, 1373, 1931, 2143, 2512, 2805
SphI	GCATGC	1 cut(s)	1898
Sse8387I	CCTGCAGG	1 cut(s)	1161
SseBI	AGGCCT	2 cut(s)	1155, 2644
SspDI	GGCGCC	1 cut(s)	2548
SspMI	CTAG	6 cut(s)	56, 920, 948, 1619, 1637, 2498
SstI	GAGCTC	1 cut(s)	15
StuI	AGGCCT	2 cut(s)	1155, 2644
StyI	CCWWGG	2 cut(s)	495, 2743
TaaI	ACNGT	5 cut(s)	1121, 1712, 1917, 2210, 2572
TaiI	ACGT	1 cut(s)	81
TatI	WGTACW	4 cut(s)	785, 1116, 2271, 2674
TauI	GCSGC	5 cut(s)	255, 258, 268, 1301, 2341
TfiI	GAWTC	7 cut(s)	466, 753, 761, 1270, 1644, 2299, 2604
Tru1I	TTAA	9 cut(s)	69, 1059, 1292, 1707, 2184, 2295, 2417, 2513, 2574
Tru9I	TTAA	9 cut(s)	69, 1059, 1292, 1707, 2184, 2295, 2417, 2513, 2574
TscAI	CASTG	3 cut(s)	316, 1081, 1920
TseFI	GTSAC	4 cut(s)	185, 1319, 1799, 2629
TseI	GCWGC	9 cut(s)	268, 345, 1139, 1387, 1844, 1922, 2024, 2254, 2517
Tsp45I	GTSAC	4 cut(s)	185, 1319, 1799, 2629
TspDTI	ATGAA	9 cut(s)	307, 504, 771, 1113, 1365, 1896, 2411, 2846, 2850
TspGWI	ACGGA	4 cut(s)	1714, 2235, 2325, 2616
TspRI	CASTG	3 cut(s)	316, 1081, 1920
Tth111I	GACNNNGTC	1 cut(s)	2245
Van91I	CCANNNNNTGG	3 cut(s)	496, 1261, 1796
Vha464I	CTTAAG	1 cut(s)	2512
VpaK11BI	GGWCC	1 cut(s)	2312
XagI	CCTNNNNNAGG	1 cut(s)	2874
XapI	RAATTY	5 cut(s)	628, 808, 897, 940, 1544
XbaI	TCTAGA	1 cut(s)	919
XceI	RCATGY	3 cut(s)	1894, 1898, 2565
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2357, 2534
XmiI	GTMKAC	2 cut(s)	1527, 2598
XmnI	GAANNNNTTC	1 cut(s)	1544
XspI	CTAG	6 cut(s)	56, 920, 948, 1619, 1637, 2498
ZrmI	AGTACT	1 cut(s)	2676
Zsp2I	ATGCAT	2 cut(s)	982, 1896

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.