Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0008260

Physical Location & Seq

Genomic Coordinates Forward (+)

10090673 .. 10094288

Gene Structure 3616 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g16060.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGGAGACCGTAACCCAGAATGGATACCACCAGAATGGGATCCAAAACGGTTCCTTGGACATTCTCTGCGTCAAAACAGAGTCCCTCAAAGCTGTTTCGGACCCGCTTAACTGGGGAGCGGCGGCGGAGTCCATGACAGGCAGCCACCTTGATGAAGTGAAGCGCATGGTGGCCGAGTACAGGAAGCCTGTGGTGAAGCTCGGTGGAAAGACCTTGACTATTGCTCAGGTCGCGGCCATAGCTAACCATGACTCTGGTGTCAAGGTTGAACTGGATGAGTCTGCCAGGGCTGGTGTGAAGGCCAGTAGTGACTGGGTGATGGACTCCATGAACAAAGGAACAGACAGCTATGGTGTCACCACCGGGTTCGGTGCGACCTCCCACAGACGAACCAAGCAAGGCGCTGCACTTCAGAAAGAGCTGATTAGATTCTTGAACGCTGGAGTATTTGGCAAGGGAACAGAGTCTCACACTCTGCCTCACCCCACAACAAGAGCAGCCATGCTTGTTAGAATCAACACTCTCCTGCAAGGCTACTCCGGCATAAGATTCGAAATCTTAGAAGCCATCACCAAGTTTCTCAACCACAACATTACTCCCTGCTTGCCTCTCCGCGGCACCATCTCCTCCTCCGGAGACCTTGTGCCGCTTTCCTATATTGCCGGACTACTAACCGGCCGCCCCAATTCTAAGTCGGTTGGACCAAAAGGCGAGACCCTCAATGCTGCTCAGGCTTTCGAACAAGTCGGTATCAGCTCAGGGTTTTTCGAGTTGCAGCCTAAAGAAGGACTTGCTCTTGTTAATGGTACTGCTGTTGGCTCTGGCTTGGCCTCCACGGTTCTTTTCGAGACCAACATTTTAACCTTGCTTTCCGAAATCTTGTCTGCGATTTTCGCTGAAGTAATGCAGGGGAAGCCTGAGTTTACAGACCACTTGACACACAAGTTGAAGCACCACCCTGGTCAAATTGAGGCCGCTGCAATTATGGAGTACATTTTGGATGGCAGTGATTACGTTAAAGCTGCTAAGAAGCTACATGAGCAGGACCCTCTTCAGAAGCCTAAACAAGACCGTTACGCTCTCCGAACCTCACCACAATGGCTCGGTCCACTAATTGAAGTGATCCGATTTTCGACAAAATCAATCGAGAGGGAGATTAATTCTGTTAATGACAACCCTCTGATCGATGTTTCAAGGAACAAGGCATTGCATGGTGGCAACTTCCAGGGTACCCCAATTGGAGTATCCATGGATAACACACGTCTGGCTATTGCATCCATTGGAAAGCTCATGTTTGCTCAATTTTCAGAACTTGTCAATGATTATTACAACAATGGCTTGCCATCCAATTTGTCCGGTGGGAGGAACCCAAGTTTGGATTATGGCTTTAAGGGAGCTGAGATTGCCATGGCATCTTATTGTTCTGAGCTTCAGTTTCTCGCAAATCCAGTGACCAACCATGTCCAGAGTGCTGAGCAACACAACCAGGATGTCAACTCTTTGGGGCTGATTTCGTCACGAAAAACTGCAGAAGCAGTTGACATACTGAAGCTCATGTCTTCCACATTTTTGGTAGCGCTTTGCCAAGCCATTGATTTGAGGCATTTGGAGGAGAACTTGAAGAGCACGGTTAAGAACACTGTGAGTCAGTTGGCCAAGAGGCTTTTAACTACCGGGGTGAATGGAGAGCTTCACCCTTCGAGGTTCTGTGAGAAGGATTTGCTTATGGTTGTCGAAAGGGAGTACCTTTTCGCCTACATTGACGATCCTTGCAGCGCTACATATCCGTTGATGCAAAGGCTAAGGCAAGTGCTTGTTGAACACGCCTTGACAAATGGTGAAAATGAGAAGAACGCAAACACTTCAATTTTCCAAAAGATTTCGGCATTTGAGGAAGAGCTTAAGACCATTTTGCCTAAAGAGGTTGAGAGCGCTAGGGCTGCATGCGAGAGCGGTAATGCGGCGATTCCAAACAGAATCATCGAGTGCAGGTCATATCCTTTGTACAAATTTGTGAGGGAGGAGTTGGGGGGAGAGTTCTTGACGGGCGAAAAGGTCAGGTCACCCGGGGAGGAGTGTGACAAGGTATTCACAGCTATGTGCCAGGGGAAAATCATTGATCCAATTCTCGATTGCCTCAGTGGTTGGAACGGTGAACCTCTTCCGATATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009636 GO:0009698 GO:0009699 GO:0009719 GO:0009725 GO:0009739 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0016598 GO:0016829 GO:0016840 GO:0016841 GO:0019438 GO:0019538 GO:0019748 GO:0019941 GO:0030163 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044550 GO:0045548 GO:0046677 GO:0046898 GO:0050896 GO:0051603 GO:0060992 GO:0071704 GO:0097305 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901654 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00360 ko00940 ko01100 ko01110 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

Lyase_aromatic

Protein Analysis

725

Amino Acids

78.98

Weight (kDa)

6.1

Isoelectric Point (pI)

34.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_aromatic	PF00221	72 - 547	6.4e-154	Aromatic amino acid lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37040 AT3G53260
fragaria_vesca	FvH4_6g16060
malus_domestica	MD04G1096200.v1.1 MD12G1116700.v1.1
prunus_persica	Prupe.6G235400_v2.0.a1
pyrus_communis	pycom04g09130 pycom12g11580
rosa_chinensis	RchiOBHm_Chr3g0469861 RchiOBHm_Chr7g0212181
rosa_laevigata	RLG00000002917 RLG00000024317
rosa_multiflora	Rmu_sc0006102.1_g000012
rosa_roxburghii	Rroxscaffold_6G00411420
rosa_rugosa	Rorug03G0105200
rosa_samantha	Rh3AG154000 Rh3BG178100 Rh3CG168800 Rh3DG197100 Rh7AG264800 Rh7CG281300 Rh7DG271200
rosa_wichuraiana	Rw3G014500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	257
Acc36I	ACCTGC	1 cut(s)	1980
Acc65I	GGTACC	1 cut(s)	1229
AccB1I	GGYRCC	2 cut(s)	617, 1229
AccBSI	CCGCTC	2 cut(s)	119, 1953
AccII	CGCG	2 cut(s)	233, 615
AccIII	TCCGGA	1 cut(s)	632
AclWI	GGATC	5 cut(s)	34, 47, 1117, 1760, 2114
AcoI	YGGCCR	4 cut(s)	171, 234, 676, 1653
AcsI	RAATTY	1 cut(s)	2009
AcuI	CTGAAG	5 cut(s)	395, 918, 1037, 1415, 1568
AfaI	GTAC	6 cut(s)	179, 808, 992, 1231, 1745, 2006
AfeI	AGCGCT	3 cut(s)	1578, 1777, 1933
AfiI	CCNNNNNNNGG	5 cut(s)	180, 614, 785, 1362, 1375
AflII	CTTAAG	1 cut(s)	1901
AflIII	ACRYGT	1 cut(s)	1259
AgsI	TTSAA	8 cut(s)	269, 436, 949, 1118, 1194, 1621, 1820, 1866
AjiI	CACGTC	1 cut(s)	1262
AjnI	CCWGG	5 cut(s)	284, 958, 1224, 1485, 2103
AjuI	GAANNNNNNNTTGG	2 cut(s)	1358, 1390
Alw21I	GWGCWC	1 cut(s)	1628
Alw26I	GTCTC	4 cut(s)	471, 630, 707, 842
AlwI	GGATC	5 cut(s)	34, 47, 1117, 1760, 2114
Ama87I	CYCGRG	1 cut(s)	2066
Aor13HI	TCCGGA	1 cut(s)	632
Aor51HI	AGCGCT	3 cut(s)	1578, 1777, 1933
AoxI	GGCC	7 cut(s)	171, 234, 300, 676, 828, 972, 1653
ApeKI	GCWGC	9 cut(s)	141, 404, 497, 725, 775, 977, 1022, 1773, 1940
ApoI	RAATTY	1 cut(s)	2009
AseI	ATTAAT	1 cut(s)	1158
Asp700I	GAANNNNTTC	1 cut(s)	2160
Asp718I	GGTACC	1 cut(s)	1229
AspLEI	GCGC	5 cut(s)	165, 404, 1579, 1778, 1934
AspS9I	GGNCC	4 cut(s)	100, 701, 1045, 1106
AsuC2I	CCSGG	4 cut(s)	364, 1675, 2067, 2068
AsuII	TTCGAA	2 cut(s)	552, 738
AvaI	CYCGRG	1 cut(s)	2066
AvaII	GGWCC	4 cut(s)	100, 701, 1045, 1106
BaeI	ACNNNNGTAYC	2 cut(s)	798, 831
BalI	TGGCCA	1 cut(s)	1655
BamHI	GGATCC	1 cut(s)	39
BanI	GGYRCC	2 cut(s)	617, 1229
BbsI	GAAGAC	1 cut(s)	1551
Bbv12I	GWGCWC	1 cut(s)	1628
BbvI	GCAGC	9 cut(s)	153, 391, 509, 712, 787, 964, 1009, 1785, 1927
BccI	CCATC	5 cut(s)	313, 575, 629, 995, 1351
BcgI	CGANNNNNNTGC	2 cut(s)	532, 566
BciT130I	CCWGG	5 cut(s)	286, 960, 1226, 1487, 2105
BciVI	GTATCC	2 cut(s)	17, 1255
BcnI	CCSGG	4 cut(s)	364, 1675, 2067, 2068
BcoDI	GTCTC	4 cut(s)	471, 630, 707, 842
BfaI	CTAG	2 cut(s)	1935, 2173
BfmI	CTRYAG	1 cut(s)	1527
BfoI	RGCGCY	4 cut(s)	405, 1580, 1779, 1935
BfrI	CTTAAG	1 cut(s)	1901
BfuAI	ACCTGC	1 cut(s)	1980
BfuI	GTATCC	2 cut(s)	17, 1255
BlpI	GCTNAGC	1 cut(s)	1473
Bme1390I	CCNGG	9 cut(s)	286, 364, 960, 1226, 1487, 1675, 2067, 2068, 2105
Bme18I	GGWCC	4 cut(s)	100, 701, 1045, 1106
BmeT110I	CYCGRG	1 cut(s)	2066
BmgBI	CACGTC	1 cut(s)	1262
BmgT120I	GGNCC	4 cut(s)	100, 701, 1045, 1106
BmiI	GGNNCC	7 cut(s)	41, 52, 102, 619, 1047, 1231, 1367
BmrFI	CCNGG	9 cut(s)	286, 364, 960, 1226, 1487, 1675, 2067, 2068, 2105
BmrI	ACTGGG	2 cut(s)	121, 322
BmsI	GCATC	3 cut(s)	1283, 1421, 1782
BmuI	ACTGGG	2 cut(s)	121, 322
BpiI	GAAGAC	1 cut(s)	1551
BpmI	CTGGAG	1 cut(s)	462
Bpu10I	CCTNAGC	4 cut(s)	225, 729, 757, 1802
Bpu1102I	GCTNAGC	1 cut(s)	1473
Bpu14I	TTCGAA	2 cut(s)	552, 738
BpuMI	CCSGG	4 cut(s)	364, 1675, 2067, 2068
Bsa29I	ATCGAT	1 cut(s)	1185
BsaI	GGTCTC	3 cut(s)	630, 707, 842
BsaWI	WCCGGW	2 cut(s)	632, 1355
BsaXI	ACNNNNNCTCC	2 cut(s)	627, 657
Bsc4I	CCNNNNNNNGG	5 cut(s)	180, 614, 785, 1362, 1375
Bse118I	RCCGGY	1 cut(s)	674
Bse1I	ACTGG	5 cut(s)	116, 276, 303, 317, 1448
Bse3DI	GCAATG	1 cut(s)	1205
BseAI	TCCGGA	1 cut(s)	632
BseBI	CCWGG	5 cut(s)	286, 960, 1226, 1487, 2105
BseCI	ATCGAT	1 cut(s)	1185
BseGI	GGATG	5 cut(s)	280, 1006, 1274, 1343, 1495
BseLI	CCNNNNNNNGG	5 cut(s)	180, 614, 785, 1362, 1375
BseMI	GCAATG	1 cut(s)	1205
BseMII	CTCAG	8 cut(s)	239, 743, 771, 909, 1389, 1416, 1464, 2152
BseNI	ACTGG	5 cut(s)	116, 276, 303, 317, 1448
BseRI	GAGGAG	5 cut(s)	616, 619, 1625, 2036, 2087
BseX3I	CGGCCG	1 cut(s)	676
BseXI	GCAGC	9 cut(s)	153, 391, 509, 712, 787, 964, 1009, 1785, 1927
BsgI	GTGCAG	2 cut(s)	390, 2008
Bsh1236I	CGCG	2 cut(s)	233, 615
Bsh1285I	CGRYCG	1 cut(s)	679
BshFI	GGCC	7 cut(s)	173, 236, 302, 678, 830, 974, 1655
BshNI	GGYRCC	2 cut(s)	617, 1229
BshVI	ATCGAT	1 cut(s)	1185
BsiEI	CGRYCG	1 cut(s)	679
BsiHKAI	GWGCWC	1 cut(s)	1628
BsiHKCI	CYCGRG	1 cut(s)	2066
BsiSI	CCGG	8 cut(s)	363, 540, 633, 663, 675, 1356, 1674, 2067
BslFI	GGGAC	1 cut(s)	67
BslI	CCNNNNNNNGG	5 cut(s)	180, 614, 785, 1362, 1375
BsmAI	GTCTC	4 cut(s)	471, 630, 707, 842
BsmFI	GGGAC	1 cut(s)	67
BsnI	GGCC	7 cut(s)	173, 236, 302, 678, 830, 974, 1655
Bso31I	GGTCTC	3 cut(s)	630, 707, 842
BsoBI	CYCGRG	1 cut(s)	2066
Bsp119I	TTCGAA	2 cut(s)	552, 738
Bsp1286I	GDGCHC	1 cut(s)	1628
Bsp13I	TCCGGA	1 cut(s)	632
Bsp1407I	TGTACA	1 cut(s)	2004
Bsp143I	GATC	5 cut(s)	39, 1122, 1182, 1765, 2119
Bsp1720I	GCTNAGC	1 cut(s)	1473
Bsp19I	CCATGG	2 cut(s)	1248, 1407
BspANI	GGCC	7 cut(s)	173, 236, 302, 678, 830, 974, 1655
BspCNI	CTCAG	8 cut(s)	238, 742, 770, 910, 1390, 1417, 1465, 2151
BspDI	ATCGAT	1 cut(s)	1185
BspEI	TCCGGA	1 cut(s)	632
BspFNI	CGCG	2 cut(s)	233, 615
BspLI	GGNNCC	7 cut(s)	41, 52, 102, 619, 1047, 1231, 1367
BspMAI	CTGCAG	1 cut(s)	1531
BspMI	ACCTGC	1 cut(s)	1980
BspPI	GGATC	5 cut(s)	34, 47, 1117, 1760, 2114
BspQI	GCTCTTC	2 cut(s)	1616, 1890
BspT104I	TTCGAA	2 cut(s)	552, 738
BspT107I	GGYRCC	2 cut(s)	617, 1229
BspTI	CTTAAG	1 cut(s)	1901
BspTNI	GGTCTC	3 cut(s)	630, 707, 842
BsrBI	CCGCTC	2 cut(s)	119, 1953
BsrDI	GCAATG	1 cut(s)	1205
BsrFI	RCCGGY	1 cut(s)	674
BsrGI	TGTACA	1 cut(s)	2004
BsrI	ACTGG	5 cut(s)	116, 276, 303, 317, 1448
BssAI	RCCGGY	1 cut(s)	674
BssMI	GATC	5 cut(s)	39, 1122, 1182, 1765, 2119
BssT1I	CCWWGG	3 cut(s)	54, 1248, 1407
Bst2UI	CCWGG	5 cut(s)	286, 960, 1226, 1487, 2105
Bst4CI	ACNGT	7 cut(s)	10, 50, 838, 1073, 1630, 1642, 2153
Bst6I	CTCTTC	4 cut(s)	1056, 1616, 1890, 2166
BstAFI	CTTAAG	1 cut(s)	1901
BstAUI	TGTACA	1 cut(s)	2004
BstBI	TTCGAA	2 cut(s)	552, 738
BstC8I	GCNNGC	3 cut(s)	605, 1340, 1945
BstDSI	CCRYGG	4 cut(s)	613, 834, 1248, 1407
BstEII	GGTNACC	1 cut(s)	2061
BstENI	CCTNNNNNAGG	1 cut(s)	783
BstF5I	GGATG	5 cut(s)	280, 1006, 1274, 1343, 1495
BstFNI	CGCG	2 cut(s)	233, 615
BstH2I	RGCGCY	4 cut(s)	405, 1580, 1779, 1935
BstHHI	GCGC	5 cut(s)	165, 404, 1579, 1778, 1934
BstKTI	GATC	5 cut(s)	42, 1125, 1185, 1768, 2122
BstMAI	GTCTC	4 cut(s)	471, 630, 707, 842
BstMBI	GATC	5 cut(s)	39, 1122, 1182, 1765, 2119
BstMCI	CGRYCG	1 cut(s)	679
BstMWI	GCNNNNNNNGC	9 cut(s)	230, 239, 540, 731, 893, 913, 1039, 1403, 1940
BstNI	CCWGG	5 cut(s)	286, 960, 1226, 1487, 2105
BstNSI	RCATGY	1 cut(s)	1947
BstPI	GGTNACC	1 cut(s)	2061
BstSCI	CCNGG	9 cut(s)	284, 362, 958, 1224, 1485, 1673, 2065, 2066, 2103
BstSFI	CTRYAG	1 cut(s)	1527
BstUI	CGCG	2 cut(s)	233, 615
BstV1I	GCAGC	9 cut(s)	153, 391, 509, 712, 787, 964, 1009, 1785, 1927
BstV2I	GAAGAC	1 cut(s)	1551
BstX2I	RGATCY	1 cut(s)	39
BstXI	CCANNNNNNTGG	3 cut(s)	35, 254, 1570
BstYI	RGATCY	1 cut(s)	39
BstZI	CGGCCG	1 cut(s)	676
Bsu15I	ATCGAT	1 cut(s)	1185
BsuI	GTATCC	2 cut(s)	17, 1255
BsuRI	GGCC	7 cut(s)	173, 236, 302, 678, 830, 974, 1655
BsuTUI	ATCGAT	1 cut(s)	1185
BtgI	CCRYGG	4 cut(s)	613, 834, 1248, 1407
BtrI	CACGTC	1 cut(s)	1262
BtsCI	GGATG	5 cut(s)	280, 1006, 1274, 1343, 1495
BtsI	GCAGTG	1 cut(s)	1012
BtsIMutI	CAGTG	4 cut(s)	1012, 1455, 1638, 2146
BveI	ACCTGC	1 cut(s)	1980
Cac8I	GCNNGC	3 cut(s)	605, 1340, 1945
CfoI	GCGC	5 cut(s)	165, 404, 1579, 1778, 1934
Cfr10I	RCCGGY	1 cut(s)	674
Cfr13I	GGNCC	4 cut(s)	100, 701, 1045, 1106
Cfr42I	CCGCGG	1 cut(s)	616
Cfr9I	CCCGGG	1 cut(s)	2066
ClaI	ATCGAT	1 cut(s)	1185
CseI	GACGC	1 cut(s)	58
Csp6I	GTAC	6 cut(s)	178, 807, 991, 1230, 1744, 2005
CviQI	GTAC	6 cut(s)	178, 807, 991, 1230, 1744, 2005
DpnI	GATC	5 cut(s)	41, 1124, 1184, 1767, 2121
DpnII	GATC	5 cut(s)	39, 1122, 1182, 1765, 2119
DrdI	GACNNNNNNGTC	1 cut(s)	257
DseDI	GACNNNNNNGTC	1 cut(s)	257
EaeI	YGGCCR	4 cut(s)	171, 234, 676, 1653
EagI	CGGCCG	1 cut(s)	676
Eam1104I	CTCTTC	4 cut(s)	1056, 1616, 1890, 2166
EarI	CTCTTC	4 cut(s)	1056, 1616, 1890, 2166
EciI	GGCGGA	1 cut(s)	140
EclXI	CGGCCG	1 cut(s)	676
Eco130I	CCWWGG	3 cut(s)	54, 1248, 1407
Eco31I	GGTCTC	3 cut(s)	630, 707, 842
Eco47I	GGWCC	4 cut(s)	100, 701, 1045, 1106
Eco47III	AGCGCT	3 cut(s)	1578, 1777, 1933
Eco52I	CGGCCG	1 cut(s)	676
Eco57I	CTGAAG	5 cut(s)	395, 918, 1037, 1415, 1568
Eco88I	CYCGRG	1 cut(s)	2066
Eco91I	GGTNACC	1 cut(s)	2061
EcoNI	CCTNNNNNAGG	1 cut(s)	783
EcoO109I	RGGNCCY	1 cut(s)	1045
EcoO65I	GGTNACC	1 cut(s)	2061
EcoRII	CCWGG	5 cut(s)	284, 958, 1224, 1485, 2103
EcoT14I	CCWWGG	3 cut(s)	54, 1248, 1407
ErhI	CCWWGG	3 cut(s)	54, 1248, 1407
FalI	AAGNNNNNCTT	2 cut(s)	774, 806
FaqI	GGGAC	1 cut(s)	67
FauI	CCCGC	1 cut(s)	111
FokI	GGATG	5 cut(s)	287, 1013, 1261, 1330, 1502
FspBI	CTAG	2 cut(s)	1935, 2173
GlaI	GCGC	5 cut(s)	164, 403, 1578, 1777, 1933
GsuI	CTGGAG	1 cut(s)	462
HaeII	RGCGCY	4 cut(s)	405, 1580, 1779, 1935
HaeIII	GGCC	7 cut(s)	173, 236, 302, 678, 830, 974, 1655
HapII	CCGG	8 cut(s)	363, 540, 633, 663, 675, 1356, 1674, 2067
HgaI	GACGC	1 cut(s)	58
HhaI	GCGC	5 cut(s)	165, 404, 1579, 1778, 1934
Hin6I	GCGC	5 cut(s)	163, 402, 1577, 1776, 1932
HinP1I	GCGC	5 cut(s)	163, 402, 1577, 1776, 1932
HincII	GTYRAC	2 cut(s)	1495, 1540
HindII	GTYRAC	2 cut(s)	1495, 1540
HpaII	CCGG	8 cut(s)	363, 540, 633, 663, 675, 1356, 1674, 2067
Hpy166II	GTNNAC	5 cut(s)	924, 1109, 1495, 1540, 2156
Hpy188III	TCNNGA	8 cut(s)	433, 633, 847, 1147, 1465, 1518, 2041, 2129
Hpy8I	GTNNAC	5 cut(s)	924, 1109, 1495, 1540, 2156
HpyAV	CCTTC	4 cut(s)	292, 779, 1707, 1708
HpyCH4III	ACNGT	7 cut(s)	10, 50, 838, 1073, 1630, 1642, 2153
HpyCH4IV	ACGT	2 cut(s)	1014, 1261
HpyF10VI	GCNNNNNNNGC	9 cut(s)	230, 239, 540, 731, 893, 913, 1039, 1403, 1940
HpySE526I	ACGT	2 cut(s)	1014, 1261
HspAI	GCGC	5 cut(s)	163, 402, 1577, 1776, 1932
Kpn2I	TCCGGA	1 cut(s)	632
KpnI	GGTACC	1 cut(s)	1233
KspI	CCGCGG	1 cut(s)	616
Kzo9I	GATC	5 cut(s)	39, 1122, 1182, 1765, 2119
LguI	GCTCTTC	2 cut(s)	1616, 1890
LmnI	GCTCC	2 cut(s)	116, 1394
Lsp1109I	GCAGC	9 cut(s)	153, 391, 509, 712, 787, 964, 1009, 1785, 1927
LweI	GCATC	3 cut(s)	1283, 1421, 1782
MaeI	CTAG	2 cut(s)	1935, 2173
MaeII	ACGT	2 cut(s)	1014, 1261
MaeIII	GTNAC	8 cut(s)	10, 308, 355, 1073, 1450, 1515, 2061, 2078
MalI	GATC	5 cut(s)	41, 1124, 1184, 1767, 2121
MbiI	CCGCTC	2 cut(s)	119, 1953
MboI	GATC	5 cut(s)	39, 1122, 1182, 1765, 2119
MboII	GAAGA	6 cut(s)	1043, 1551, 1633, 1861, 1907, 2153
MfeI	CAATTG	1 cut(s)	1236
MflI	RGATCY	1 cut(s)	39
MhlI	GDGCHC	1 cut(s)	1628
MlsI	TGGCCA	1 cut(s)	1655
MluNI	TGGCCA	1 cut(s)	1655
MlyI	GAGTC	7 cut(s)	89, 137, 245, 287, 317, 473, 1654
MmeI	TCCRAC	2 cut(s)	679, 2126
Mox20I	TGGCCA	1 cut(s)	1655
MroI	TCCGGA	1 cut(s)	632
MroXI	GAANNNNTTC	1 cut(s)	2160
MscI	TGGCCA	1 cut(s)	1655
MslI	CAYNNNNRTG	4 cut(s)	33, 150, 1096, 2096
Msp20I	TGGCCA	1 cut(s)	1655
MspA1I	CMGCKG	2 cut(s)	615, 977
MspCI	CTTAAG	1 cut(s)	1901
MspI	CCGG	8 cut(s)	363, 540, 633, 663, 675, 1356, 1674, 2067
MspR9I	CCNGG	9 cut(s)	286, 364, 960, 1226, 1487, 1675, 2067, 2068, 2105
MunI	CAATTG	1 cut(s)	1236
MvaI	CCWGG	5 cut(s)	286, 960, 1226, 1487, 2105
MvnI	CGCG	2 cut(s)	233, 615
MwoI	GCNNNNNNNGC	9 cut(s)	230, 239, 540, 731, 893, 913, 1039, 1403, 1940
NciI	CCSGG	4 cut(s)	364, 1675, 2067, 2068
NcoI	CCATGG	2 cut(s)	1248, 1407
NdeII	GATC	5 cut(s)	39, 1122, 1182, 1765, 2119
NlaIV	GGNNCC	7 cut(s)	41, 52, 102, 619, 1047, 1231, 1367
NmeAIII	GCCGAG	1 cut(s)	199
NmuCI	GTSAC	6 cut(s)	308, 355, 1450, 1515, 2061, 2078
NspI	RCATGY	1 cut(s)	1947
NspV	TTCGAA	2 cut(s)	552, 738
PaeI	GCATGC	1 cut(s)	1947
PciSI	GCTCTTC	2 cut(s)	1616, 1890
PdmI	GAANNNNTTC	1 cut(s)	2160
PfeI	GAWTC	5 cut(s)	429, 513, 549, 1966, 1977
PleI	GAGTC	7 cut(s)	88, 136, 245, 286, 317, 472, 1653
PpsI	GAGTC	7 cut(s)	88, 136, 245, 286, 317, 472, 1653
PpuMI	RGGWCCY	1 cut(s)	1045
PshBI	ATTAAT	1 cut(s)	1158
Psp5II	RGGWCCY	1 cut(s)	1045
Psp6I	CCWGG	5 cut(s)	284, 958, 1224, 1485, 2103
PspEI	GGTNACC	1 cut(s)	2061
PspGI	CCWGG	5 cut(s)	284, 958, 1224, 1485, 2103
PspN4I	GGNNCC	7 cut(s)	41, 52, 102, 619, 1047, 1231, 1367
PspPI	GGNCC	4 cut(s)	100, 701, 1045, 1106
PspPPI	RGGWCCY	1 cut(s)	1045
PstI	CTGCAG	1 cut(s)	1531
PsuI	RGATCY	1 cut(s)	39
RsaI	GTAC	6 cut(s)	179, 808, 992, 1231, 1745, 2006
RsaNI	GTAC	6 cut(s)	178, 807, 991, 1230, 1744, 2005
RseI	CAYNNNNRTG	4 cut(s)	33, 150, 1096, 2096
SacII	CCGCGG	1 cut(s)	616
SapI	GCTCTTC	2 cut(s)	1616, 1890
Sau3AI	GATC	5 cut(s)	39, 1122, 1182, 1765, 2119
Sau96I	GGNCC	4 cut(s)	100, 701, 1045, 1106
SchI	GAGTC	7 cut(s)	89, 137, 245, 287, 317, 473, 1654
ScrFI	CCNGG	9 cut(s)	286, 364, 960, 1226, 1487, 1675, 2067, 2068, 2105
SduI	GDGCHC	1 cut(s)	1628
SfaNI	GCATC	3 cut(s)	1283, 1421, 1782
SfcI	CTRYAG	1 cut(s)	1527
Sfr303I	CCGCGG	1 cut(s)	616
SfuI	TTCGAA	2 cut(s)	552, 738
SgrBI	CCGCGG	1 cut(s)	616
SinI	GGWCC	4 cut(s)	100, 701, 1045, 1106
SmaI	CCCGGG	1 cut(s)	2068
SmiMI	CAYNNNNRTG	4 cut(s)	33, 150, 1096, 2096
SmlI	CTYRAG	1 cut(s)	1901
SmoI	CTYRAG	1 cut(s)	1901
SphI	GCATGC	1 cut(s)	1947
SspMI	CTAG	2 cut(s)	1935, 2173
StyD4I	CCNGG	9 cut(s)	284, 362, 958, 1224, 1485, 1673, 2065, 2066, 2103
StyI	CCWWGG	3 cut(s)	54, 1248, 1407
TaaI	ACNGT	7 cut(s)	10, 50, 838, 1073, 1630, 1642, 2153
TaiI	ACGT	2 cut(s)	1017, 1264
TaqII	GACCGA	1 cut(s)	1094
TatI	WGTACW	3 cut(s)	177, 990, 2004
TauI	GCSGC	8 cut(s)	122, 125, 236, 618, 649, 681, 977, 1964
TfiI	GAWTC	5 cut(s)	429, 513, 549, 1966, 1977
TscAI	CASTG	4 cut(s)	1012, 1455, 1645, 2146
TseFI	GTSAC	6 cut(s)	308, 355, 1450, 1515, 2061, 2078
TseI	GCWGC	9 cut(s)	141, 404, 497, 725, 775, 977, 1022, 1773, 1940
Tsp45I	GTSAC	6 cut(s)	308, 355, 1450, 1515, 2061, 2078
TspDTI	ATGAA	2 cut(s)	168, 344
TspGWI	ACGGA	1 cut(s)	1776
TspMI	CCCGGG	1 cut(s)	2066
TspRI	CASTG	4 cut(s)	1012, 1455, 1645, 2146
Vha464I	CTTAAG	1 cut(s)	1901
VpaK11BI	GGWCC	4 cut(s)	100, 701, 1045, 1106
VspI	ATTAAT	1 cut(s)	1158
XagI	CCTNNNNNAGG	1 cut(s)	783
XapI	RAATTY	1 cut(s)	2009
XceI	RCATGY	1 cut(s)	1947
XmaI	CCCGGG	1 cut(s)	2066
XmnI	GAANNNNTTC	1 cut(s)	2160
XspI	CTAG	2 cut(s)	1935, 2173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.