Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008260

Physical Location & Seq

Genomic Coordinates Forward (+)

29434438 .. 29437647

Gene Structure 3210 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18985

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGGAGACCATAACCAAGAAAGGGATTAAGAACGATTTGTTGGACGGTGCCTGCATTAGAACAGAGGACTCCGTTTCGGACCCTTTGAATTGGGGAGCAGCGGCGGGTTCAATGACAGGCAGCCACCTGGACGAAGTTAAGCGCATGGTGGCCAAGTACAGGAAGCCGGTGGTGAAGCTCGGTGGAGAAACCTTGACTATCTCGCAGGTGGCGGCCATAGCAAACCATGACTCCGGAGTCAAGCTTGAGCTCGCTGAGTTGGCCAGGGATGGTGTGAAGGCCAGTAGTGATTGGGTCATGGACTCCATCAACAATGGGACTGATACTTACGGTATCACCACTGGGTTCGGTGCCACCTCCCACAGACGAAGCAAACAAGGCGCTGCATTACAAAACGAGTTAATTAGATTCTTGAATGCTGGAGTATTTGGCAATGGAACAGAGTCAGCTCAGACTCTTCCTCACTCTGCCACAAGAGCAGCCATGCTTGTTCGGATCAATACACTCCTGCAAGGCTACTCTGGCATAAGATTCGAAATCCTAGAAGCCATCACCAAGTTTCTCAACCACAACATTACTCCATGCTTGCCTCTCCGCGGCACAATAACCGCCTCCGGAGACATTGTTCAGCTGGCCTACATTGCCGGAATACTAACTGGCCGACCCAATTCCAAGGCGATCGGTTCAAAAGGCGAGACCCTCAATGCCGCTGAGGTTTTCAAACAAGTTGGAATTAGTTCCGGGTTCTTTGAGCTGCAGCCTAAGGAAGGACTTGCACTTGTGAATGGCACTGCTGTTGGCTCTGGCTTGGCCTCCACGGTTCTTTTCGAGACCAACATCATGGCTTTGCTGTCCGAAATCTTGTCTGCGGTTGTCGTTGAAGTGATGCTGGGGAGGCTCGAATTTACAGACCACTTGATACACAAGTTGAAGCACCACCCTGGTCAGATTGAGGCTGCTGCAATTATGGAATACATTTTGGATGGCAGTTCTTATGGTGAAGTTGCTAAGAAGCAATACGGGCTGGACTCTCTTCAGAAGCTTAAACAAGACCGCTACGCTCTCCGATCCTCACCACAATGGCTCGGTCCACAAATTGAAGTTATTCGGTTTTCCACCAAATCTATCGAGAGGGAGATTAATTCTGTTAGTGACAACCCTTTGATTGATGTCTCAAGGAATAAGGCATTGCATTGTGGCAACTTTCAGGGTACCCCAATTGGAGTGTCCATGGATAACACTCGCTTGGCAATTGCGTCCATTGGAAAGCTCATGTTTGCTCAATTTACAGAACTTGTCAATGACTCTTACAACAATGGCTTGCCATCAAGTTTATCGGGTGGGAGGGACCCAAGTTTGGATTACGGCTTCAAGGGAGCTGAGGTTGCCATGGCATCTTATTGTTCAGAGCTTCAGTTTCTCGCGAATCCGGTGACTAACCACGTCCAGAGTGCTGAGCAGCACAACCAGGATGTCAACTCATTGGGGATGATATCGGCGCGAATGACCAGAGAAGCTGTTGACATATTAAAGCTCATGTCTTCCACATTCTTAGTAGCGCTCTGCCAAGCTATTGACTTGAGGCACTTGGAGGAGAACTTAGAGAGCACAGTTAAGAACACTGTGAGTCAACTGGCCAAGAGGGTTTTGACTACTGGCACCAATGGGGAGCATCATCCGTCGAGATTCTGCGAGAACGATTTGCTTATGGTTGTTGAAAGGGAGCACCTTTTCGCCTACATTGACGATCCTTGCAATGCTACATATCCCTTGATGCAAAGGCTAAGGCAAGTGCTTGTTGAACACGCTTTGAAAAACGGTGAGAATGAGAAGAATGAACACACTTCAATCTTCCAAAAGATTTCAGCTTTTGAGGAAGAGCTGAAGACCATTTTGCCTAAAGAGATTGAGAGCGCTAGGGCTGCGTACGAGAGCGGGAATGCTGCGATTCCCAACAGGATCCTGGAGTGCAGATCTTATCCTCTGTACAAATTTGTGAGGGAGGAGTTGGGGGGAGAGTTCTTGACGGGCGAAAAAGTCAGGTCCCCCGGGGAGGAATGTGACAAGGTGTTTACAGCTATGTGCCAGGGAAAAATCATTGATCCCATTCTCGATTGCCTCAGTGGTTGGAACGGTGAACCTCTTTCGATTTTGTTGCCCGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009636 GO:0009698 GO:0009699 GO:0009719 GO:0009725 GO:0009739 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0016598 GO:0016829 GO:0016840 GO:0016841 GO:0019438 GO:0019538 GO:0019748 GO:0019941 GO:0030163 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044550 GO:0045548 GO:0046677 GO:0046898 GO:0050896 GO:0051603 GO:0060992 GO:0071704 GO:0097305 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901654 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00360 ko00940 ko01100 ko01110 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

Lyase_aromatic

Protein Analysis

721

Amino Acids

78.68

Weight (kDa)

5.72

Isoelectric Point (pI)

35.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_aromatic	PF00221	65 - 541	1.4e-148	Aromatic amino acid lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37040 AT3G53260
fragaria_vesca	FvH4_6g16060
malus_domestica	MD04G1096200.v1.1 MD12G1116700.v1.1
prunus_persica	Prupe.6G235400_v2.0.a1
pyrus_communis	pycom04g09130 pycom12g11580
rosa_chinensis	RchiOBHm_Chr3g0469861 RchiOBHm_Chr7g0212181
rosa_laevigata	RLG00000002917 RLG00000024317
rosa_multiflora	Rmu_sc0006102.1_g000012
rosa_roxburghii	Rroxscaffold_6G00411420
rosa_rugosa	Rorug03G0105200
rosa_samantha	Rh3AG154000 Rh3BG178100 Rh3CG168800 Rh3DG197100 Rh7AG264800 Rh7CG281300 Rh7DG271200
rosa_wichuraiana	Rw3G014500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	196
AasI	GACNNNNNNGTC	1 cut(s)	236
Acc36I	ACCTGC	1 cut(s)	196
Acc65I	GGTACC	1 cut(s)	1211
AccB1I	GGYRCC	4 cut(s)	47, 350, 1211, 1658
AccBSI	CCGCTC	1 cut(s)	1935
AccII	CGCG	3 cut(s)	597, 1424, 1501
AccIII	TCCGGA	2 cut(s)	233, 614
AclWI	GGATC	6 cut(s)	503, 1062, 1742, 1954, 1967, 2096
AcoI	YGGCCR	5 cut(s)	150, 213, 261, 658, 1635
AcsI	RAATTY	2 cut(s)	902, 1991
AcuI	CTGAAG	3 cut(s)	1019, 1397, 1904
AfaI	GTAC	4 cut(s)	158, 1213, 1928, 1988
AfeI	AGCGCT	2 cut(s)	1560, 1915
AfiI	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
AjiI	CACGTC	1 cut(s)	1444
AjnI	CCWGG	6 cut(s)	126, 263, 940, 1467, 1962, 2085
AjuI	GAANNNNNNNTTGG	2 cut(s)	23, 55
AloI	GAACNNNNNNTCC	2 cut(s)	609, 641
Alw21I	GWGCWC	3 cut(s)	252, 1610, 1728
Alw26I	GTCTC	4 cut(s)	612, 689, 824, 1177
AlwI	GGATC	6 cut(s)	503, 1062, 1742, 1954, 1967, 2096
Ama87I	CYCGRG	1 cut(s)	2048
Aor13HI	TCCGGA	2 cut(s)	233, 614
Aor51HI	AGCGCT	2 cut(s)	1560, 1915
AoxI	GGCC	8 cut(s)	150, 213, 261, 279, 633, 658, 810, 1635
ApoI	RAATTY	2 cut(s)	902, 1991
AseI	ATTAAT	1 cut(s)	1140
Asp700I	GAANNNNTTC	2 cut(s)	736, 1104
Asp718I	GGTACC	1 cut(s)	1211
AspLEI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
AspS9I	GGNCC	4 cut(s)	79, 1088, 1348, 2043
AsuC2I	CCSGG	3 cut(s)	742, 2049, 2050
AsuHPI	GGTGA	8 cut(s)	184, 328, 544, 1010, 1065, 1444, 1832, 2147
AsuII	TTCGAA	1 cut(s)	534
AvaI	CYCGRG	1 cut(s)	2048
AvaII	GGWCC	4 cut(s)	79, 1088, 1348, 2043
AxyI	CCTNAGG	1 cut(s)	762
BaeI	ACNNNNGTAYC	2 cut(s)	911, 944
BalI	TGGCCA	3 cut(s)	152, 263, 1637
BamHI	GGATCC	1 cut(s)	1959
BanI	GGYRCC	4 cut(s)	47, 350, 1211, 1658
BanII	GRGCYC	1 cut(s)	252
BbsI	GAAGAC	2 cut(s)	1533, 1892
Bbv12I	GWGCWC	3 cut(s)	252, 1610, 1728
BbvCI	CCTCAGC	2 cut(s)	711, 1380
BccI	CCATC	5 cut(s)	263, 314, 557, 977, 1333
BceAI	ACGGC	1 cut(s)	1381
BcgI	CGANNNNNNTGC	3 cut(s)	514, 548, 2137
BciT130I	CCWGG	6 cut(s)	128, 265, 942, 1469, 1964, 2087
BcnI	CCSGG	3 cut(s)	742, 2049, 2050
BcoDI	GTCTC	4 cut(s)	612, 689, 824, 1177
BfaI	CTAG	2 cut(s)	542, 1917
BfmI	CTRYAG	1 cut(s)	755
BfoI	RGCGCY	3 cut(s)	384, 1562, 1917
BfuAI	ACCTGC	1 cut(s)	196
BglII	AGATCT	1 cut(s)	1973
BlpI	GCTNAGC	1 cut(s)	1455
Bme1390I	CCNGG	9 cut(s)	128, 265, 742, 942, 1469, 1964, 2049, 2050, 2087
Bme18I	GGWCC	4 cut(s)	79, 1088, 1348, 2043
BmeT110I	CYCGRG	1 cut(s)	2048
BmgBI	CACGTC	1 cut(s)	1444
BmgT120I	GGNCC	4 cut(s)	79, 1088, 1348, 2043
BmiI	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
BmrFI	CCNGG	9 cut(s)	128, 265, 742, 942, 1469, 1964, 2049, 2050, 2087
BmrI	ACTGGG	1 cut(s)	351
BmsI	GCATC	4 cut(s)	876, 1403, 1681, 1764
BmuI	ACTGGG	1 cut(s)	351
BpiI	GAAGAC	2 cut(s)	1533, 1892
BpmI	CTGGAG	2 cut(s)	441, 1985
Bpu10I	CCTNAGC	3 cut(s)	711, 1380, 1784
Bpu1102I	GCTNAGC	1 cut(s)	1455
Bpu14I	TTCGAA	1 cut(s)	534
BpuEI	CTTGAG	3 cut(s)	266, 1159, 1600
BpuMI	CCSGG	3 cut(s)	742, 2049, 2050
BsaI	GGTCTC	2 cut(s)	689, 824
BsaWI	WCCGGW	3 cut(s)	233, 614, 1429
BsaXI	ACNNNNNCTCC	6 cut(s)	215, 245, 609, 639, 1368, 1398
Bsc4I	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
Bse118I	RCCGGY	1 cut(s)	166
Bse1I	ACTGG	5 cut(s)	282, 346, 661, 1638, 1660
Bse21I	CCTNAGG	1 cut(s)	762
Bse3DI	GCAATG	4 cut(s)	439, 639, 1187, 1762
BseAI	TCCGGA	2 cut(s)	233, 614
BseBI	CCWGG	6 cut(s)	128, 265, 942, 1469, 1964, 2087
BseGI	GGATG	5 cut(s)	274, 988, 1477, 1494, 1675
BseLI	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
BseMI	GCAATG	4 cut(s)	439, 639, 1187, 1762
BseMII	CTCAG	6 cut(s)	246, 464, 702, 1371, 1446, 2134
BseNI	ACTGG	5 cut(s)	282, 346, 661, 1638, 1660
BseRI	GAGGAG	2 cut(s)	1607, 2018
BseYI	CCCAGC	1 cut(s)	889
BsgI	GTGCAG	1 cut(s)	1990
Bsh1236I	CGCG	3 cut(s)	597, 1424, 1501
Bsh1285I	CGRYCG	1 cut(s)	681
BshFI	GGCC	8 cut(s)	152, 215, 263, 281, 635, 660, 812, 1637
BshNI	GGYRCC	4 cut(s)	47, 350, 1211, 1658
BsiEI	CGRYCG	1 cut(s)	681
BsiHKAI	GWGCWC	3 cut(s)	252, 1610, 1728
BsiHKCI	CYCGRG	1 cut(s)	2048
BsiSI	CCGG	7 cut(s)	167, 234, 615, 645, 741, 1430, 2049
BsiWI	CGTACG	1 cut(s)	1926
BslFI	GGGAC	3 cut(s)	331, 1361, 2029
BslI	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
BsmAI	GTCTC	4 cut(s)	612, 689, 824, 1177
BsmFI	GGGAC	3 cut(s)	331, 1361, 2029
BsmI	GAATGC	2 cut(s)	421, 1945
BsnI	GGCC	8 cut(s)	152, 215, 263, 281, 635, 660, 812, 1637
Bso31I	GGTCTC	2 cut(s)	689, 824
BsoBI	CYCGRG	1 cut(s)	2048
Bsp119I	TTCGAA	1 cut(s)	534
Bsp1286I	GDGCHC	3 cut(s)	252, 1610, 1728
Bsp13I	TCCGGA	2 cut(s)	233, 614
Bsp1407I	TGTACA	1 cut(s)	1986
Bsp143I	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
Bsp1720I	GCTNAGC	1 cut(s)	1455
Bsp19I	CCATGG	2 cut(s)	1230, 1389
Bsp68I	TCGCGA	1 cut(s)	1424
BspANI	GGCC	8 cut(s)	152, 215, 263, 281, 635, 660, 812, 1637
BspCNI	CTCAG	6 cut(s)	247, 463, 703, 1372, 1447, 2133
BspEI	TCCGGA	2 cut(s)	233, 614
BspFNI	CGCG	3 cut(s)	597, 1424, 1501
BspLI	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
BspMAI	CTGCAG	1 cut(s)	759
BspMI	ACCTGC	1 cut(s)	196
BspPI	GGATC	6 cut(s)	503, 1062, 1742, 1954, 1967, 2096
BspQI	GCTCTTC	1 cut(s)	1872
BspT104I	TTCGAA	1 cut(s)	534
BspT107I	GGYRCC	4 cut(s)	47, 350, 1211, 1658
BspTNI	GGTCTC	2 cut(s)	689, 824
BsrBI	CCGCTC	1 cut(s)	1935
BsrDI	GCAATG	4 cut(s)	439, 639, 1187, 1762
BsrFI	RCCGGY	1 cut(s)	166
BsrGI	TGTACA	1 cut(s)	1986
BsrI	ACTGG	5 cut(s)	282, 346, 661, 1638, 1660
BssAI	RCCGGY	1 cut(s)	166
BssMI	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
BssT1I	CCWWGG	3 cut(s)	672, 1230, 1389
Bst2UI	CCWGG	6 cut(s)	128, 265, 942, 1469, 1964, 2087
Bst4CI	ACNGT	7 cut(s)	47, 332, 820, 1612, 1624, 1820, 2135
Bst6I	CTCTTC	3 cut(s)	462, 1038, 1872
BstAUI	TGTACA	1 cut(s)	1986
BstBI	TTCGAA	1 cut(s)	534
BstC8I	GCNNGC	5 cut(s)	52, 252, 587, 633, 1322
BstDSI	CCRYGG	4 cut(s)	595, 816, 1230, 1389
BstENI	CCTNNNNNAGG	1 cut(s)	765
BstF5I	GGATG	5 cut(s)	274, 988, 1477, 1494, 1675
BstFNI	CGCG	3 cut(s)	597, 1424, 1501
BstH2I	RGCGCY	3 cut(s)	384, 1562, 1917
BstHHI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
BstKTI	GATC	7 cut(s)	498, 681, 1070, 1750, 1962, 1976, 2104
BstMAI	GTCTC	4 cut(s)	612, 689, 824, 1177
BstMBI	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
BstMCI	CGRYCG	1 cut(s)	681
BstNI	CCWGG	6 cut(s)	128, 265, 942, 1469, 1964, 2087
BstSCI	CCNGG	9 cut(s)	126, 263, 740, 940, 1467, 1962, 2047, 2048, 2085
BstSFI	CTRYAG	1 cut(s)	755
BstUI	CGCG	3 cut(s)	597, 1424, 1501
BstV2I	GAAGAC	2 cut(s)	1533, 1892
BstX2I	RGATCY	2 cut(s)	1959, 1973
BstXI	CCANNNNNNTGG	1 cut(s)	841
BstYI	RGATCY	2 cut(s)	1959, 1973
Bsu36I	CCTNAGG	1 cut(s)	762
BsuRI	GGCC	8 cut(s)	152, 215, 263, 281, 635, 660, 812, 1637
BtgI	CCRYGG	4 cut(s)	595, 816, 1230, 1389
BtrI	CACGTC	1 cut(s)	1444
BtsCI	GGATG	5 cut(s)	274, 988, 1477, 1494, 1675
BtsI	GCAGTG	1 cut(s)	789
BtsIMutI	CAGTG	4 cut(s)	339, 789, 1620, 2128
BtuMI	TCGCGA	1 cut(s)	1424
BveI	ACCTGC	1 cut(s)	196
Cac8I	GCNNGC	5 cut(s)	52, 252, 587, 633, 1322
CfoI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
Cfr10I	RCCGGY	1 cut(s)	166
Cfr13I	GGNCC	4 cut(s)	79, 1088, 1348, 2043
Cfr42I	CCGCGG	1 cut(s)	598
Cfr9I	CCCGGG	1 cut(s)	2048
CseI	GACGC	1 cut(s)	1245
Csp6I	GTAC	4 cut(s)	157, 1212, 1927, 1987
CviQI	GTAC	4 cut(s)	157, 1212, 1927, 1987
DpnI	GATC	7 cut(s)	497, 680, 1069, 1749, 1961, 1975, 2103
DpnII	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
DrdI	GACNNNNNNGTC	1 cut(s)	236
DseDI	GACNNNNNNGTC	1 cut(s)	236
EaeI	YGGCCR	5 cut(s)	150, 213, 261, 658, 1635
Eam1104I	CTCTTC	3 cut(s)	462, 1038, 1872
EarI	CTCTTC	3 cut(s)	462, 1038, 1872
Ecl136II	GAGCTC	1 cut(s)	250
Eco130I	CCWWGG	3 cut(s)	672, 1230, 1389
Eco24I	GRGCYC	1 cut(s)	252
Eco31I	GGTCTC	2 cut(s)	689, 824
Eco32I	GATATC	1 cut(s)	1494
Eco47I	GGWCC	4 cut(s)	79, 1088, 1348, 2043
Eco47III	AGCGCT	2 cut(s)	1560, 1915
Eco53kI	GAGCTC	1 cut(s)	250
Eco57I	CTGAAG	3 cut(s)	1019, 1397, 1904
Eco81I	CCTNAGG	1 cut(s)	762
Eco88I	CYCGRG	1 cut(s)	2048
EcoICRI	GAGCTC	1 cut(s)	250
EcoNI	CCTNNNNNAGG	1 cut(s)	765
EcoO109I	RGGNCCY	2 cut(s)	1348, 2043
EcoRII	CCWGG	6 cut(s)	126, 263, 940, 1467, 1962, 2085
EcoRV	GATATC	1 cut(s)	1494
EcoT14I	CCWWGG	3 cut(s)	672, 1230, 1389
EcoT38I	GRGCYC	1 cut(s)	252
ErhI	CCWWGG	3 cut(s)	672, 1230, 1389
FaqI	GGGAC	3 cut(s)	331, 1361, 2029
FauI	CCCGC	2 cut(s)	97, 1928
FokI	GGATG	5 cut(s)	281, 995, 1484, 1501, 1662
FriOI	GRGCYC	1 cut(s)	252
FspBI	CTAG	2 cut(s)	542, 1917
GlaI	GCGC	5 cut(s)	143, 382, 1500, 1560, 1915
GsaI	CCCAGC	1 cut(s)	893
GsuI	CTGGAG	2 cut(s)	441, 1985
HaeII	RGCGCY	3 cut(s)	384, 1562, 1917
HaeIII	GGCC	8 cut(s)	152, 215, 263, 281, 635, 660, 812, 1637
HapII	CCGG	7 cut(s)	167, 234, 615, 645, 741, 1430, 2049
HgaI	GACGC	1 cut(s)	1245
HhaI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
Hin6I	GCGC	5 cut(s)	142, 381, 1499, 1559, 1914
HinP1I	GCGC	5 cut(s)	142, 381, 1499, 1559, 1914
HincII	GTYRAC	3 cut(s)	1477, 1522, 1631
HindII	GTYRAC	3 cut(s)	1477, 1522, 1631
HindIII	AAGCTT	2 cut(s)	242, 1040
HpaII	CCGG	7 cut(s)	167, 234, 615, 645, 741, 1430, 2049
HphI	GGTGA	8 cut(s)	184, 328, 544, 1010, 1065, 1444, 1832, 2147
Hpy166II	GTNNAC	6 cut(s)	1091, 1477, 1522, 1631, 2073, 2138
Hpy188I	TCNGA	8 cut(s)	79, 453, 495, 856, 948, 1038, 1067, 1408
Hpy8I	GTNNAC	6 cut(s)	1091, 1477, 1522, 1631, 2073, 2138
Hpy99I	CGWCG	1 cut(s)	1684
HpyAV	CCTTC	2 cut(s)	271, 761
HpyCH4III	ACNGT	7 cut(s)	47, 332, 820, 1612, 1624, 1820, 2135
HpyCH4IV	ACGT	1 cut(s)	1443
HpySE526I	ACGT	1 cut(s)	1443
HspAI	GCGC	5 cut(s)	142, 381, 1499, 1559, 1914
KflI	GGGWCCC	1 cut(s)	1348
Kpn2I	TCCGGA	2 cut(s)	233, 614
KpnI	GGTACC	1 cut(s)	1215
KspI	CCGCGG	1 cut(s)	598
Kzo9I	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
LguI	GCTCTTC	1 cut(s)	1872
LmnI	GCTCC	4 cut(s)	95, 1376, 1669, 1723
LweI	GCATC	4 cut(s)	876, 1403, 1681, 1764
MaeI	CTAG	2 cut(s)	542, 1917
MaeII	ACGT	1 cut(s)	1443
MaeIII	GTNAC	3 cut(s)	1151, 1432, 2060
MalI	GATC	7 cut(s)	497, 680, 1069, 1749, 1961, 1975, 2103
MbiI	CCGCTC	1 cut(s)	1935
MboI	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
MboII	GAAGA	7 cut(s)	449, 1025, 1533, 1843, 1843, 1889, 1897
MfeI	CAATTG	2 cut(s)	1218, 1251
MflI	RGATCY	2 cut(s)	1959, 1973
MhlI	GDGCHC	3 cut(s)	252, 1610, 1728
MlsI	TGGCCA	3 cut(s)	152, 263, 1637
MluNI	TGGCCA	3 cut(s)	152, 263, 1637
MlyI	GAGTC	9 cut(s)	62, 224, 246, 296, 448, 452, 1022, 1298, 1636
MmeI	TCCRAC	3 cut(s)	21, 709, 2108
Mox20I	TGGCCA	3 cut(s)	152, 263, 1637
MroI	TCCGGA	2 cut(s)	233, 614
MroXI	GAANNNNTTC	2 cut(s)	736, 1104
MscI	TGGCCA	3 cut(s)	152, 263, 1637
MseI	TTAA	7 cut(s)	27, 138, 401, 1044, 1140, 1529, 1614
MslI	CAYNNNNRTG	1 cut(s)	1078
Msp20I	TGGCCA	3 cut(s)	152, 263, 1637
MspA1I	CMGCKG	4 cut(s)	101, 597, 631, 710
MspI	CCGG	7 cut(s)	167, 234, 615, 645, 741, 1430, 2049
MspR9I	CCNGG	9 cut(s)	128, 265, 742, 942, 1469, 1964, 2049, 2050, 2087
MunI	CAATTG	2 cut(s)	1218, 1251
Mva1269I	GAATGC	2 cut(s)	421, 1945
MvaI	CCWGG	6 cut(s)	128, 265, 942, 1469, 1964, 2087
MvnI	CGCG	3 cut(s)	597, 1424, 1501
NciI	CCSGG	3 cut(s)	742, 2049, 2050
NcoI	CCATGG	2 cut(s)	1230, 1389
NdeII	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
NlaIV	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
NmuCI	GTSAC	3 cut(s)	1151, 1432, 2060
NruI	TCGCGA	1 cut(s)	1424
NspV	TTCGAA	1 cut(s)	534
PaqCI	CACCTGC	1 cut(s)	196
PciSI	GCTCTTC	1 cut(s)	1872
PctI	GAATGC	2 cut(s)	421, 1945
PdmI	GAANNNNTTC	2 cut(s)	736, 1104
PfeI	GAWTC	5 cut(s)	408, 531, 1426, 1686, 1948
Pfl23II	CGTACG	1 cut(s)	1926
PfoI	TCCNGGA	1 cut(s)	1962
Ple19I	CGATCG	1 cut(s)	681
PleI	GAGTC	9 cut(s)	62, 224, 245, 296, 448, 451, 1022, 1298, 1635
PpsI	GAGTC	9 cut(s)	62, 224, 245, 296, 448, 451, 1022, 1298, 1635
PpuMI	RGGWCCY	2 cut(s)	1348, 2043
PshBI	ATTAAT	1 cut(s)	1140
Psp124BI	GAGCTC	1 cut(s)	252
Psp5II	RGGWCCY	2 cut(s)	1348, 2043
Psp6I	CCWGG	6 cut(s)	126, 263, 940, 1467, 1962, 2085
PspFI	CCCAGC	1 cut(s)	889
PspGI	CCWGG	6 cut(s)	126, 263, 940, 1467, 1962, 2085
PspLI	CGTACG	1 cut(s)	1926
PspN4I	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
PspPI	GGNCC	4 cut(s)	79, 1088, 1348, 2043
PspPPI	RGGWCCY	2 cut(s)	1348, 2043
PstI	CTGCAG	1 cut(s)	759
PsuI	RGATCY	2 cut(s)	1959, 1973
PvuI	CGATCG	1 cut(s)	681
PvuII	CAGCTG	1 cut(s)	631
RruI	TCGCGA	1 cut(s)	1424
RsaI	GTAC	4 cut(s)	158, 1213, 1928, 1988
RsaNI	GTAC	4 cut(s)	157, 1212, 1927, 1987
RseI	CAYNNNNRTG	1 cut(s)	1078
SacI	GAGCTC	1 cut(s)	252
SacII	CCGCGG	1 cut(s)	598
SapI	GCTCTTC	1 cut(s)	1872
SaqAI	TTAA	7 cut(s)	27, 138, 401, 1044, 1140, 1529, 1614
Sau3AI	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
Sau96I	GGNCC	4 cut(s)	79, 1088, 1348, 2043
SchI	GAGTC	9 cut(s)	62, 224, 246, 296, 448, 452, 1022, 1298, 1636
ScrFI	CCNGG	9 cut(s)	128, 265, 742, 942, 1469, 1964, 2049, 2050, 2087
SduI	GDGCHC	3 cut(s)	252, 1610, 1728
SfaNI	GCATC	4 cut(s)	876, 1403, 1681, 1764
SfcI	CTRYAG	1 cut(s)	755
Sfr303I	CCGCGG	1 cut(s)	598
SfuI	TTCGAA	1 cut(s)	534
SgrBI	CCGCGG	1 cut(s)	598
SinI	GGWCC	4 cut(s)	79, 1088, 1348, 2043
SmaI	CCCGGG	1 cut(s)	2050
SmiMI	CAYNNNNRTG	1 cut(s)	1078
SmlI	CTYRAG	3 cut(s)	245, 1174, 1579
SmoI	CTYRAG	3 cut(s)	245, 1174, 1579
SspMI	CTAG	2 cut(s)	542, 1917
SstI	GAGCTC	1 cut(s)	252
StyD4I	CCNGG	9 cut(s)	126, 263, 740, 940, 1467, 1962, 2047, 2048, 2085
StyI	CCWWGG	3 cut(s)	672, 1230, 1389
TaaI	ACNGT	7 cut(s)	47, 332, 820, 1612, 1624, 1820, 2135
TaiI	ACGT	1 cut(s)	1446
TaqI	TCGA	7 cut(s)	534, 828, 900, 1128, 1682, 2112, 2147
TaqII	GACCGA	1 cut(s)	1076
TatI	WGTACW	2 cut(s)	156, 1986
TauI	GCSGC	4 cut(s)	104, 215, 600, 710
TfiI	GAWTC	5 cut(s)	408, 531, 1426, 1686, 1948
Tru1I	TTAA	7 cut(s)	27, 138, 401, 1044, 1140, 1529, 1614
Tru9I	TTAA	7 cut(s)	27, 138, 401, 1044, 1140, 1529, 1614
TscAI	CASTG	4 cut(s)	346, 796, 1627, 2128
TseFI	GTSAC	3 cut(s)	1151, 1432, 2060
Tsp45I	GTSAC	3 cut(s)	1151, 1432, 2060
TspDTI	ATGAA	1 cut(s)	1851
TspGWI	ACGGA	2 cut(s)	61, 1668
TspMI	CCCGGG	1 cut(s)	2048
TspRI	CASTG	4 cut(s)	346, 796, 1627, 2128
VpaK11BI	GGWCC	4 cut(s)	79, 1088, 1348, 2043
VspI	ATTAAT	1 cut(s)	1140
XagI	CCTNNNNNAGG	1 cut(s)	765
XapI	RAATTY	2 cut(s)	902, 1991
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1960
XmaI	CCCGGG	1 cut(s)	2048
XmnI	GAANNNNTTC	2 cut(s)	736, 1104
XspI	CTAG	2 cut(s)	542, 1917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.