Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0008260

Physical Location & Seq

Genomic Coordinates Reverse (-)

17723731 .. 17727188

Gene Structure 3458 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1096200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGAGGCGAAAACCATCACGCAAAATGGTCAAAACGGCCACCACCAGAACGGAGTGTCGGAGTCCCAGCTGTGCATTAAAAAGGACCCATTGAACTGGGGTCTAGTGGCTGATTCACTAAAAGGGAGCCACTTGGATGAAGTGAAGCGTATGGTGGCCGAGTACAGAAAGCCGGTGGTGAAGCTCGGCGGAGAGAGTCTCACCATTTCCCAAGTTGCAGCCATAGCCACTCATGACACCGGGGTCAAGGTTGAGCTGTCTGAGTCGGCTAGGGCTGGGGTCAAGGCCAGCAGTGATTGGGTCATGGATAGCATGGGTAAGGGGACTGACAGCTACGGTGTCACCACCGGGTTTGGTGCAACCTCCCACCGGAGAACAAACAAAGGAGCTGCCCTTCAAAAGGAGCTAATTAGATTCTTGAACGCTGGAGTGTTTGGAAGTGCTACAGAATCAGGCCACACACTGCCACACCAAGCAACAAGAGCAGCCATGTTGGTCCGAATCAACACACTCCTCCAAGGCTACTCCGGCATAAGATTCGAAATCTTGGAAGCCATCACCAAGTTCCTGAACAACAACGTTACTCCATGCTTGCCCCTACGCGGTACTATTACCGCCTCCGGAGATCTTGTCCCGCTATCCTACATTGCCGGATTACTCACCGGCAGGCCTAATTCCAAAGCTGTCGGACCAAATGGGCAGACCCTCAATGCCTCAGAAGCTTTTGAGCTAGTAGGGATCAATTCCGGGTTTTTTGAGTTGCAGCCTAAAGAAGGGTTAGCTCTTGTGAACGGCACTGCTGTTGGTTCTGGCTTGGCCTCCACGGTTCTTTTCGAGACCAACATTTTGGCATTGCTTGCGGAGATTTTATCAGCGATTTTCGCTGAAGTGATGCAGGGGAAACCGGAGTTTACTGATCACTTGACGCACAAGTTGAAGCACCACCCTGGACAGATTGAGGCAGCTGCAATTATGGAACATATTTTGGATGGCAGCTCTTATGTCAAAGCTGCTAAGAAGTTACATGAGCAGGATCCCCTGCAGAAGCCAAAGCAGGATCGCTACGCTCTCCGAACATCACCTCAGTGGCTGGGACCTCAAATTGAAGTGATTCGTTTCTCCACCAAATCCATTGAGAGGGAGATCAACTCGGTTAATGACAACCCTTTGATTGATGTTTCGAGGAACAAGGCCTTACATGGAGGCAACTTCCAGGGGACCCCAATTGGGGTTTCCATGGACAACACTCGCTTGGCGATTGCATCCATTGGCAAGCTCATGTTTGCACAATTTTCTGAACTTGTCAATGACTTTTACAACAATGGTTTGCCTTCAAATCTGTCGGGAGGCAGGAATCCTAGCTTGGATTACGGTTTCAAGGGGGCTGAAATCGCCATGGCATCTTATTGTTCCGAGCTGCAGTTTCTCGCAAATCCGGTAACTAACCATGTCCAGAGTGCTGAGCAGCACAACCAAGATGTTAACTCTTTGGGGTTGATCTCTTCAAGGAAAACAGCTGAAGCTGTTGATATCTTGAAGCTCATGTCTTCCACATTTTTGGTTGCGCTTTGTCAGTCCATAGATTTGAGGCATTTGGAGGAGAACTTGAGGAACACTGTGAAGAACACGGTGAGCCAAGTAGCAAAGAGGACTTTAACAACTGGGGTTAATGGAGAGCTTCACCCCTCAAGGTTCTGTGAGAAGGATCTGCTTAAAGTTGTCGATAGGGAGTATGTTTTTGCCTACATTGACGATCCCTGCAGTGCCACTTACCCATTGATGCAAAAACTAAGGGAAGTGCTGGTTGAACATGCTTTGACAAATGGCGAGAGTGAGAAGAATGCAAGCACTTCGATCTTCCAAAAGATTGGAGCTTTCGAGGAAGAGCTGAAAGCGCTTTTGCCTAAAGAGGTTGAGAGTGCAAGGAGTGCAATTGAGAGCGGAAATGCTGCAGTTCCAAACAGGATTGCGGAATGCAGATCTTATCCCTTGTACAAGTTTGTGAGGGAGGAGTTGGGGGGAGAGTACCTAACCGGGGAGAAGGTCAGGTCACCGGGCGAGGAGTGTGACAAGGTGTTCCAAGCCATCTGCCAGGGTAAGATTATCGACCCAATTCTGGGTTGCCTCGAGGGTTGGAACGGCGCACCTCTGCCTATCTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009636 GO:0009698 GO:0009699 GO:0009719 GO:0009725 GO:0009739 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0016598 GO:0016829 GO:0016840 GO:0016841 GO:0019438 GO:0019538 GO:0019748 GO:0019941 GO:0030163 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044550 GO:0045548 GO:0046677 GO:0046898 GO:0050896 GO:0051603 GO:0060992 GO:0071704 GO:0097305 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901654 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00360 ko00940 ko01100 ko01110 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

Lyase_aromatic

Protein Analysis

721

Amino Acids

78.14

Weight (kDa)

6.29

Isoelectric Point (pI)

34.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_aromatic	PF00221	67 - 544	4e-153	Aromatic amino acid lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37040 AT3G53260
fragaria_vesca	FvH4_6g16060
malus_domestica	MD04G1096200.v1.1 MD12G1116700.v1.1
prunus_persica	Prupe.6G235400_v2.0.a1
pyrus_communis	pycom04g09130 pycom12g11580
rosa_chinensis	RchiOBHm_Chr3g0469861 RchiOBHm_Chr7g0212181
rosa_laevigata	RLG00000002917 RLG00000024317
rosa_multiflora	Rmu_sc0006102.1_g000012
rosa_roxburghii	Rroxscaffold_6G00411420
rosa_rugosa	Rorug03G0105200
rosa_samantha	Rh3AG154000 Rh3BG178100 Rh3CG168800 Rh3DG197100 Rh7AG264800 Rh7CG281300 Rh7DG271200
rosa_wichuraiana	Rw3G014500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	242
AbsI	CCTCGAGG	1 cut(s)	2126
AccBSI	CCGCTC	1 cut(s)	1941
AccII	CGCG	1 cut(s)	603
AccIII	TCCGGA	1 cut(s)	620
AciI	CCGC	7 cut(s)	189, 603, 615, 635, 860, 1941, 1970
AclI	AACGTT	1 cut(s)	579
AclWI	GGATC	6 cut(s)	746, 1028, 1041, 1065, 1713, 1748
AcoI	YGGCCR	2 cut(s)	37, 156
AcuI	CTGAAG	2 cut(s)	906, 1539
AfaI	GTAC	4 cut(s)	164, 607, 1994, 2027
AfeI	AGCGCT	1 cut(s)	1896
AjnI	CCWGG	3 cut(s)	946, 1212, 2091
AjuI	GAANNNNNNNTTGG	4 cut(s)	1216, 1248, 1346, 1378
AleI	CACNNNNGTG	1 cut(s)	1084
Alw26I	GTCTC	2 cut(s)	203, 830
AlwI	GGATC	6 cut(s)	746, 1028, 1041, 1065, 1713, 1748
AlwNI	CAGNNNCTG	1 cut(s)	1090
Ama87I	CYCGRG	1 cut(s)	2126
Aor13HI	TCCGGA	1 cut(s)	620
Aor51HI	AGCGCT	1 cut(s)	1896
AoxI	GGCC	7 cut(s)	37, 156, 285, 454, 668, 816, 1191
ArsI	GACNNNNNNTTYG	2 cut(s)	829, 861
Asp700I	GAANNNNTTC	1 cut(s)	1110
AspLEI	GCGC	3 cut(s)	1567, 1897, 2144
AspS9I	GGNCC	5 cut(s)	85, 496, 689, 1094, 1218
AsuC2I	CCSGG	5 cut(s)	241, 349, 748, 2035, 2055
AsuHPI	GGTGA	9 cut(s)	190, 193, 334, 550, 652, 1071, 1642, 1673, 2043
AsuII	TTCGAA	1 cut(s)	540
AvaI	CYCGRG	1 cut(s)	2126
AvaII	GGWCC	5 cut(s)	85, 496, 689, 1094, 1218
BamHI	GGATCC	1 cut(s)	1033
BbsI	GAAGAC	1 cut(s)	1539
BccI	CCATC	4 cut(s)	23, 563, 983, 2093
BceAI	ACGGC	3 cut(s)	52, 808, 2155
BcgI	CGANNNNNNTGC	4 cut(s)	520, 554, 1833, 1867
BciT130I	CCWGG	3 cut(s)	948, 1214, 2093
BclI	TGATCA	1 cut(s)	916
BcnI	CCSGG	5 cut(s)	241, 349, 748, 2035, 2055
BcoDI	GTCTC	2 cut(s)	203, 830
BfaI	CTAG	4 cut(s)	104, 270, 731, 1359
BfmI	CTRYAG	5 cut(s)	444, 1040, 1418, 1759, 1950
BfoI	RGCGCY	1 cut(s)	1898
BglII	AGATCT	2 cut(s)	625, 1979
BlpI	GCTNAGC	1 cut(s)	1461
Bme1390I	CCNGG	8 cut(s)	241, 349, 748, 948, 1214, 2035, 2055, 2093
Bme18I	GGWCC	5 cut(s)	85, 496, 689, 1094, 1218
BmeT110I	CYCGRG	1 cut(s)	2126
BmgT120I	GGNCC	5 cut(s)	85, 496, 689, 1094, 1218
BmiI	GGNNCC	6 cut(s)	87, 128, 1035, 1095, 1219, 1220
BmrFI	CCNGG	8 cut(s)	241, 349, 748, 948, 1214, 2035, 2055, 2093
BmrI	ACTGGG	2 cut(s)	106, 1671
BmsI	GCATC	4 cut(s)	882, 1271, 1409, 1770
BmuI	ACTGGG	2 cut(s)	106, 1671
BpiI	GAAGAC	1 cut(s)	1539
BplI	GAGNNNNNCTC	4 cut(s)	183, 215, 1133, 1165
BpmI	CTGGAG	1 cut(s)	447
Bpu1102I	GCTNAGC	1 cut(s)	1461
Bpu14I	TTCGAA	1 cut(s)	540
BpuEI	CTTGAG	2 cut(s)	1627, 1672
BpuMI	CCSGG	5 cut(s)	241, 349, 748, 2035, 2055
BsaI	GGTCTC	1 cut(s)	830
BsaJI	CCNNGG	9 cut(s)	240, 517, 822, 946, 1213, 1236, 1395, 2034, 2092
BsaWI	WCCGGW	4 cut(s)	369, 620, 904, 1435
BsaXI	ACNNNNNCTCC	2 cut(s)	615, 645
Bse118I	RCCGGY	2 cut(s)	172, 662
Bse1I	ACTGG	2 cut(s)	101, 1666
Bse3DI	GCAATG	2 cut(s)	645, 851
BseAI	TCCGGA	1 cut(s)	620
BseBI	CCWGG	3 cut(s)	948, 1214, 2093
BseDI	CCNNGG	9 cut(s)	240, 517, 822, 946, 1213, 1236, 1395, 2034, 2092
BseGI	GGATG	3 cut(s)	142, 994, 1262
BseMI	GCAATG	2 cut(s)	645, 851
BseMII	CTCAG	4 cut(s)	252, 729, 1097, 1452
BseNI	ACTGG	2 cut(s)	101, 1666
BseRI	GAGGAG	4 cut(s)	503, 1613, 2024, 2075
BseYI	CCCAGC	3 cut(s)	66, 275, 1090
Bsh1236I	CGCG	1 cut(s)	603
BshFI	GGCC	7 cut(s)	39, 158, 287, 456, 670, 818, 1193
BsiHKCI	CYCGRG	1 cut(s)	2126
BslFI	GGGAC	5 cut(s)	49, 337, 617, 1107, 1231
BsmAI	GTCTC	2 cut(s)	203, 830
BsmFI	GGGAC	5 cut(s)	49, 337, 617, 1107, 1231
BsmI	GAATGC	2 cut(s)	1846, 1979
BsnI	GGCC	7 cut(s)	39, 158, 287, 456, 670, 818, 1193
Bso31I	GGTCTC	1 cut(s)	830
BsoBI	CYCGRG	1 cut(s)	2126
Bsp119I	TTCGAA	1 cut(s)	540
Bsp13I	TCCGGA	1 cut(s)	620
Bsp1407I	TGTACA	1 cut(s)	1992
Bsp1720I	GCTNAGC	1 cut(s)	1461
Bsp19I	CCATGG	2 cut(s)	1236, 1395
BspACI	CCGC	7 cut(s)	189, 603, 615, 635, 860, 1941, 1970
BspANI	GGCC	7 cut(s)	39, 158, 287, 456, 670, 818, 1193
BspCNI	CTCAG	4 cut(s)	253, 728, 1096, 1453
BspEI	TCCGGA	1 cut(s)	620
BspFNI	CGCG	1 cut(s)	603
BspHI	TCATGA	1 cut(s)	232
BspLI	GGNNCC	6 cut(s)	87, 128, 1035, 1095, 1219, 1220
BspMAI	CTGCAG	4 cut(s)	1044, 1422, 1763, 1954
BspPI	GGATC	6 cut(s)	746, 1028, 1041, 1065, 1713, 1748
BspQI	GCTCTTC	1 cut(s)	1878
BspT104I	TTCGAA	1 cut(s)	540
BspTNI	GGTCTC	1 cut(s)	830
BsrBI	CCGCTC	1 cut(s)	1941
BsrDI	GCAATG	2 cut(s)	645, 851
BsrFI	RCCGGY	2 cut(s)	172, 662
BsrGI	TGTACA	1 cut(s)	1992
BsrI	ACTGG	2 cut(s)	101, 1666
BssAI	RCCGGY	2 cut(s)	172, 662
BssECI	CCNNGG	9 cut(s)	240, 517, 822, 946, 1213, 1236, 1395, 2034, 2092
BssT1I	CCWWGG	3 cut(s)	517, 1236, 1395
Bst2UI	CCWGG	3 cut(s)	948, 1214, 2093
Bst4CI	ACNGT	5 cut(s)	338, 826, 1373, 1618, 1630
Bst6I	CTCTTC	2 cut(s)	1507, 1878
BstAPI	GCANNNNNTGC	2 cut(s)	857, 1928
BstAUI	TGTACA	1 cut(s)	1992
BstBI	TTCGAA	1 cut(s)	540
BstC8I	GCNNGC	6 cut(s)	289, 593, 668, 858, 1274, 1846
BstDEI	CTNAG	6 cut(s)	261, 715, 1014, 1083, 1461, 1790
BstDSI	CCRYGG	3 cut(s)	822, 1236, 1395
BstEII	GGTNACC	1 cut(s)	2049
BstENI	CCTNNNNNAGG	2 cut(s)	398, 771
BstF5I	GGATG	3 cut(s)	142, 994, 1262
BstFNI	CGCG	1 cut(s)	603
BstH2I	RGCGCY	1 cut(s)	1898
BstHHI	GCGC	3 cut(s)	1567, 1897, 2144
BstMAI	GTCTC	2 cut(s)	203, 830
BstMWI	GCNNNNNNNGC	9 cut(s)	224, 482, 528, 719, 857, 881, 1391, 1894, 1928
BstNI	CCWGG	3 cut(s)	948, 1214, 2093
BstNSI	RCATGY	1 cut(s)	1814
BstPI	GGTNACC	1 cut(s)	2049
BstSCI	CCNGG	8 cut(s)	239, 347, 746, 946, 1212, 2033, 2053, 2091
BstSFI	CTRYAG	5 cut(s)	444, 1040, 1418, 1759, 1950
BstUI	CGCG	1 cut(s)	603
BstV2I	GAAGAC	1 cut(s)	1539
BstX2I	RGATCY	4 cut(s)	625, 1033, 1705, 1979
BstXI	CCANNNNNNTGG	4 cut(s)	96, 847, 1558, 1868
BstYI	RGATCY	4 cut(s)	625, 1033, 1705, 1979
BsuRI	GGCC	7 cut(s)	39, 158, 287, 456, 670, 818, 1193
BtgI	CCRYGG	3 cut(s)	822, 1236, 1395
BtsCI	GGATG	3 cut(s)	142, 994, 1262
BtsI	GCAGTG	4 cut(s)	298, 461, 795, 1768
BtsIMutI	CAGTG	6 cut(s)	298, 461, 795, 1091, 1614, 1768
Cac8I	GCNNGC	6 cut(s)	289, 593, 668, 858, 1274, 1846
CaiI	CAGNNNCTG	1 cut(s)	1090
CciI	TCATGA	1 cut(s)	232
CfoI	GCGC	3 cut(s)	1567, 1897, 2144
Cfr10I	RCCGGY	2 cut(s)	172, 662
Cfr13I	GGNCC	5 cut(s)	85, 496, 689, 1094, 1218
CseI	GACGC	1 cut(s)	934
Csp6I	GTAC	4 cut(s)	163, 606, 1993, 2026
CspCI	CAANNNNNGTGG	2 cut(s)	334, 369
CviQI	GTAC	4 cut(s)	163, 606, 1993, 2026
DdeI	CTNAG	6 cut(s)	261, 715, 1014, 1083, 1461, 1790
DrdI	GACNNNNNNGTC	1 cut(s)	242
DseDI	GACNNNNNNGTC	1 cut(s)	242
EaeI	YGGCCR	2 cut(s)	37, 156
Eam1104I	CTCTTC	2 cut(s)	1507, 1878
EarI	CTCTTC	2 cut(s)	1507, 1878
EciI	GGCGGA	1 cut(s)	204
Eco130I	CCWWGG	3 cut(s)	517, 1236, 1395
Eco147I	AGGCCT	2 cut(s)	670, 1193
Eco31I	GGTCTC	1 cut(s)	830
Eco32I	GATATC	1 cut(s)	1531
Eco47I	GGWCC	5 cut(s)	85, 496, 689, 1094, 1218
Eco47III	AGCGCT	1 cut(s)	1896
Eco57I	CTGAAG	2 cut(s)	906, 1539
Eco88I	CYCGRG	1 cut(s)	2126
Eco91I	GGTNACC	1 cut(s)	2049
EcoNI	CCTNNNNNAGG	2 cut(s)	398, 771
EcoO109I	RGGNCCY	3 cut(s)	85, 1094, 1218
EcoO65I	GGTNACC	1 cut(s)	2049
EcoRII	CCWGG	3 cut(s)	946, 1212, 2091
EcoRV	GATATC	1 cut(s)	1531
EcoT14I	CCWWGG	3 cut(s)	517, 1236, 1395
ErhI	CCWWGG	3 cut(s)	517, 1236, 1395
FaqI	GGGAC	5 cut(s)	49, 337, 617, 1107, 1231
FauI	CCCGC	1 cut(s)	642
FbaI	TGATCA	1 cut(s)	916
FokI	GGATG	3 cut(s)	149, 1001, 1249
FspBI	CTAG	4 cut(s)	104, 270, 731, 1359
GlaI	GCGC	3 cut(s)	1566, 1896, 2143
GsaI	CCCAGC	3 cut(s)	70, 279, 1094
GsuI	CTGGAG	1 cut(s)	447
HaeII	RGCGCY	1 cut(s)	1898
HaeIII	GGCC	7 cut(s)	39, 158, 287, 456, 670, 818, 1193
HgaI	GACGC	1 cut(s)	934
HhaI	GCGC	3 cut(s)	1567, 1897, 2144
Hin6I	GCGC	3 cut(s)	1565, 1895, 2142
HinP1I	GCGC	3 cut(s)	1565, 1895, 2142
HincII	GTYRAC	1 cut(s)	1483
HindII	GTYRAC	1 cut(s)	1483
HindIII	AAGCTT	1 cut(s)	720
HpaI	GTTAAC	1 cut(s)	1483
HphI	GGTGA	9 cut(s)	190, 193, 334, 550, 652, 1071, 1642, 1673, 2043
Hpy166II	GTNNAC	3 cut(s)	790, 912, 1483
Hpy188I	TCNGA	8 cut(s)	61, 262, 500, 689, 718, 1073, 1297, 1414
Hpy188III	TCNNGA	8 cut(s)	233, 418, 568, 621, 835, 1344, 1453, 1534
Hpy8I	GTNNAC	3 cut(s)	790, 912, 1483
HpyAV	CCTTC	5 cut(s)	404, 767, 1341, 1696, 2035
HpyCH4III	ACNGT	5 cut(s)	338, 826, 1373, 1618, 1630
HpyCH4IV	ACGT	1 cut(s)	579
HpyF10VI	GCNNNNNNNGC	9 cut(s)	224, 482, 528, 719, 857, 881, 1391, 1894, 1928
HpyF3I	CTNAG	6 cut(s)	261, 715, 1014, 1083, 1461, 1790
HpySE526I	ACGT	1 cut(s)	579
HspAI	GCGC	3 cut(s)	1565, 1895, 2142
KflI	GGGWCCC	1 cut(s)	1218
Kpn2I	TCCGGA	1 cut(s)	620
Ksp22I	TGATCA	1 cut(s)	916
KspAI	GTTAAC	1 cut(s)	1483
LguI	GCTCTTC	1 cut(s)	1878
LmnI	GCTCC	4 cut(s)	126, 386, 403, 1871
LweI	GCATC	4 cut(s)	882, 1271, 1409, 1770
MaeI	CTAG	4 cut(s)	104, 270, 731, 1359
MaeII	ACGT	1 cut(s)	579
MaeIII	GTNAC	6 cut(s)	340, 580, 1020, 1438, 2049, 2066
MbiI	CCGCTC	1 cut(s)	1941
MboII	GAAGA	6 cut(s)	1494, 1539, 1633, 1849, 1849, 1895
MfeI	CAATTG	2 cut(s)	1224, 1932
MflI	RGATCY	4 cut(s)	625, 1033, 1705, 1979
MluCI	AATT	9 cut(s)	408, 673, 742, 969, 1101, 1224, 1289, 1932, 2112
MlyI	GAGTC	3 cut(s)	71, 205, 272
MmeI	TCCRAC	3 cut(s)	39, 667, 2114
MroI	TCCGGA	1 cut(s)	620
MroXI	GAANNNNTTC	1 cut(s)	1110
MseI	TTAA	6 cut(s)	78, 1155, 1482, 1655, 1668, 1713
MslI	CAYNNNNRTG	2 cut(s)	135, 1084
MspA1I	CMGCKG	3 cut(s)	70, 965, 1517
MspR9I	CCNGG	8 cut(s)	241, 349, 748, 948, 1214, 2035, 2055, 2093
MunI	CAATTG	2 cut(s)	1224, 1932
Mva1269I	GAATGC	2 cut(s)	1846, 1979
MvaI	CCWGG	3 cut(s)	948, 1214, 2093
MvnI	CGCG	1 cut(s)	603
MwoI	GCNNNNNNNGC	9 cut(s)	224, 482, 528, 719, 857, 881, 1391, 1894, 1928
NciI	CCSGG	5 cut(s)	241, 349, 748, 2035, 2055
NcoI	CCATGG	2 cut(s)	1236, 1395
NlaIV	GGNNCC	6 cut(s)	87, 128, 1035, 1095, 1219, 1220
NmeAIII	GCCGAG	2 cut(s)	165, 184
NmuCI	GTSAC	3 cut(s)	340, 2049, 2066
NspI	RCATGY	1 cut(s)	1814
NspV	TTCGAA	1 cut(s)	540
OliI	CACNNNNGTG	1 cut(s)	1084
PaeR7I	CTCGAG	1 cut(s)	2126
PagI	TCATGA	1 cut(s)	232
PceI	AGGCCT	2 cut(s)	670, 1193
PciSI	GCTCTTC	1 cut(s)	1878
PctI	GAATGC	2 cut(s)	1846, 1979
PdmI	GAANNNNTTC	1 cut(s)	1110
PfeI	GAWTC	7 cut(s)	113, 414, 449, 501, 537, 1111, 1354
PleI	GAGTC	3 cut(s)	70, 204, 271
PpsI	GAGTC	3 cut(s)	70, 204, 271
PpuMI	RGGWCCY	3 cut(s)	85, 1094, 1218
Psp1406I	AACGTT	1 cut(s)	579
Psp5II	RGGWCCY	3 cut(s)	85, 1094, 1218
Psp6I	CCWGG	3 cut(s)	946, 1212, 2091
PspEI	GGTNACC	1 cut(s)	2049
PspFI	CCCAGC	3 cut(s)	66, 275, 1090
PspGI	CCWGG	3 cut(s)	946, 1212, 2091
PspN4I	GGNNCC	6 cut(s)	87, 128, 1035, 1095, 1219, 1220
PspPI	GGNCC	5 cut(s)	85, 496, 689, 1094, 1218
PspPPI	RGGWCCY	3 cut(s)	85, 1094, 1218
PspXI	VCTCGAGB	1 cut(s)	2126
PstI	CTGCAG	4 cut(s)	1044, 1422, 1763, 1954
PstNI	CAGNNNCTG	1 cut(s)	1090
PsuI	RGATCY	4 cut(s)	625, 1033, 1705, 1979
PvuII	CAGCTG	3 cut(s)	70, 965, 1517
RsaI	GTAC	4 cut(s)	164, 607, 1994, 2027
RsaNI	GTAC	4 cut(s)	163, 606, 1993, 2026
RseI	CAYNNNNRTG	2 cut(s)	135, 1084
SapI	GCTCTTC	1 cut(s)	1878
SaqAI	TTAA	6 cut(s)	78, 1155, 1482, 1655, 1668, 1713
Sau96I	GGNCC	5 cut(s)	85, 496, 689, 1094, 1218
SchI	GAGTC	3 cut(s)	71, 205, 272
ScrFI	CCNGG	8 cut(s)	241, 349, 748, 948, 1214, 2035, 2055, 2093
SfaNI	GCATC	4 cut(s)	882, 1271, 1409, 1770
SfcI	CTRYAG	5 cut(s)	444, 1040, 1418, 1759, 1950
Sfr274I	CTCGAG	1 cut(s)	2126
SfuI	TTCGAA	1 cut(s)	540
SinI	GGWCC	5 cut(s)	85, 496, 689, 1094, 1218
SlaI	CTCGAG	1 cut(s)	2126
SmiMI	CAYNNNNRTG	2 cut(s)	135, 1084
SmlI	CTYRAG	3 cut(s)	1606, 1687, 2126
SmoI	CTYRAG	3 cut(s)	1606, 1687, 2126
Sse9I	AATT	9 cut(s)	408, 673, 742, 969, 1101, 1224, 1289, 1932, 2112
SseBI	AGGCCT	2 cut(s)	670, 1193
SsiI	CCGC	7 cut(s)	189, 603, 615, 635, 860, 1941, 1970
SspMI	CTAG	4 cut(s)	104, 270, 731, 1359
StuI	AGGCCT	2 cut(s)	670, 1193
StyD4I	CCNGG	8 cut(s)	239, 347, 746, 946, 1212, 2033, 2053, 2091
StyI	CCWWGG	3 cut(s)	517, 1236, 1395
TaaI	ACNGT	5 cut(s)	338, 826, 1373, 1618, 1630
TaiI	ACGT	1 cut(s)	582
TaqI	TCGA	8 cut(s)	540, 834, 1181, 1722, 1853, 1878, 2106, 2127
TasI	AATT	9 cut(s)	408, 673, 742, 969, 1101, 1224, 1289, 1932, 2112
TatI	WGTACW	2 cut(s)	162, 1992
TfiI	GAWTC	7 cut(s)	113, 414, 449, 501, 537, 1111, 1354
Tru1I	TTAA	6 cut(s)	78, 1155, 1482, 1655, 1668, 1713
Tru9I	TTAA	6 cut(s)	78, 1155, 1482, 1655, 1668, 1713
TscAI	CASTG	6 cut(s)	298, 468, 802, 1091, 1621, 1768
TseFI	GTSAC	3 cut(s)	340, 2049, 2066
Tsp45I	GTSAC	3 cut(s)	340, 2049, 2066
TspDTI	ATGAA	1 cut(s)	153
TspGWI	ACGGA	1 cut(s)	66
TspRI	CASTG	6 cut(s)	298, 468, 802, 1091, 1621, 1768
VpaK11BI	GGWCC	5 cut(s)	85, 496, 689, 1094, 1218
XagI	CCTNNNNNAGG	2 cut(s)	398, 771
XceI	RCATGY	1 cut(s)	1814
XhoI	CTCGAG	1 cut(s)	2126
XmnI	GAANNNNTTC	1 cut(s)	1110
XspI	CTAG	4 cut(s)	104, 270, 731, 1359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.