Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0008260

Physical Location & Seq

Genomic Coordinates Forward (+)

27205644 .. 27209500

Gene Structure 3857 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG264800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2166 bp

ATGGAGACCATAACCAAGAAAGGGATTAAGAACGATTTGTTGGACGGTGCCTGCATTAGAACAGAGGACTCCGTTTCGGACCCTTTGAATTGGGGAGCAGCGGCGGGGTCAATGACAGGCAGCCACCTGGACGAAGTTAAGCGCATGGTGGCCAAGTACAGGAAGCCGGTGGTGAAGCTCGGTGGAGAAACCTTGACTATCTCGCAGGTGGCGGCCATAGCAAACCATGACTCCGGAGTCAAGCTTGAGCTCGCTGAGTCGGCCAGGGATGGTGTGAAGGCCAGTAGTGATTGGGTCATGGACTCCATCAACAATGGGACTGATACTTACGGCATCACCACTGGGTTCGGTGCCACCTCCCACAGACGAAGCAAACAAGGCGCTGCATTACAAAACGAGTTAATTAGATTCTTGAATGCTGGAGTATTTGGCAATGGAACAGAGTCAGCTCAGACTCTTCCTCACTCTGCCACAAGAGCAGCCATGCTTGTTCGGATCAATACACTCCTGCAAGGCTACTCTGGCATAAGATTCGAAATCCTAGAAGCCATCACCAAGTTTCTCAACCACAACATTACTCCATGCTTGCCTCTCCGCGGCACAATAACCGCCTCCGGAGACATTGTTCAGCTGGCCTACATTGCCGGAATACTAACTGGCCGACCCAATTCCAAGGCGATCGGGTCAAAAGGCGAGACCCTCAATGCCGCTGAGGTTTTCAAACAAGTTGGAATTAGTTCCGGGTTCTTTGAGTTGCAGCCTAAAGAAGGACTTGCTCTTGTGAATGGCACTGCTGTTGGCTCTGGCTTGGCCTCCACGGTTCTTTTCGAGACCAACATCATGGCTTTGCTGTCCGAAATCTTGTCTGCGGTTGTCGTTGAAGTGATGCTGGGGAGGCTCGAATTTACAGACCACTTGATACACAAGTTGAAGCACCACCCTGGTCAGATTGAGGCTGCTGCAATTATGGAATACATTTTAGATGGCAGTTCTTATGGTGAAGTTGCTAAGAAGCAATACGAGCTGGACTCTCTTCAGAAGCTTAAACAAGACCGCTACGCTCTCCGATCCTCACCACAATGGCTCGGTCCACAAATTGAAGTTATTCGGTTTTCCACCAAATCTATCGAGAGGGAGATTAATTCTGTTAGTGACAACCCTTTGATTGATGTCTCAAGGAATAAGGCATTGCATTGTGGCAACTTTCAGGGTACCCCAATTGGAGTGTCCATGGATAACACTCGCTTGGCAATTGCGTCCATTGGAAAGCTCATGTTTGCTCAATTTACAGAACTTGTCAATGACTCTTACAACAATGGCTTGCCATCAAGTTTATCGGGTGGGAGGGACCCAAGTTTGGATTACGGCTTCAAGGGAGCTGAGGTTGCCATGGCATCTTATTGTTCAGAGCTTCAGTTTCTCGCGAATCCGGTGACTAACCACGTCCAGAGTGCTGAGCAGCACAACCAGGATGTCAACTCATTGGGGATGATATCGGCGCGAATGACCAGAGAAGCTGTTGACATATTAAAGCTCATGTCTTCCACATTCTTAGTAGCGCTCTGCCAAGCTATTGACTTGAGGCACTTGGAGGAGAACTTAGAGAGCACAGTTAAGAACACTGTGAGTCAACTGGCCAAGAGGGTTTTGACTACTGGCACCAATGGGGAGCATCATCCGTCGAGATTCTGCGAGAACGATTTGCTTATGGTTGTTGAAAGGGAGCACCTTTTCGCCTACATTGACGATCCTTGCAATGCTACATATCCCTTAATGCAAAGGCTAAGGCAAGTGCTTGTTGAACACGCTTTGAAAAACCGTGAGAATGAGAAGAATGAACACACTTCAATCTTCCAAAAGATTTCAGCTTTTGAGGAAGAGCTGAAGACCATTTTGCCTAAAGAGATTGAGAGCGCTAGGGCTGCGTACGAGAGCGGGAATGCTGCGATTCCAAACAGGATCCTGGAGTGCAGATCTTATCCTCTGTACAAATTTGTGAGGGAGGAGTTGGGGGGAGAGTTCTTGACGGGCGAAAAAGTCAGGTCCCCCGGGGAGGAATGTGACAAGGTGTTTACAGCTATGTGCCAGGGGAAAATCATTGATCCCATTCTCGATTGCCTCAGTGGTTGGAACGGTGAACCTCTTTCGATTTTGTTGCCCGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009636 GO:0009698 GO:0009699 GO:0009719 GO:0009725 GO:0009739 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0016598 GO:0016829 GO:0016840 GO:0016841 GO:0019438 GO:0019538 GO:0019748 GO:0019941 GO:0030163 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044550 GO:0045548 GO:0046677 GO:0046898 GO:0050896 GO:0051603 GO:0060992 GO:0071704 GO:0097305 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901654 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00360 ko00940 ko01100 ko01110 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

Lyase_aromatic

Protein Analysis

721

Amino Acids

78.82

Weight (kDa)

5.73

Isoelectric Point (pI)

35.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_aromatic	PF00221	65 - 541	3.3e-149	Aromatic amino acid lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37040 AT3G53260
fragaria_vesca	FvH4_6g16060
malus_domestica	MD04G1096200.v1.1 MD12G1116700.v1.1
prunus_persica	Prupe.6G235400_v2.0.a1
pyrus_communis	pycom04g09130 pycom12g11580
rosa_chinensis	RchiOBHm_Chr3g0469861 RchiOBHm_Chr7g0212181
rosa_laevigata	RLG00000002917 RLG00000024317
rosa_multiflora	Rmu_sc0006102.1_g000012
rosa_roxburghii	Rroxscaffold_6G00411420
rosa_rugosa	Rorug03G0105200
rosa_samantha	Rh3AG154000 Rh3BG178100 Rh3CG168800 Rh3DG197100 Rh7AG264800 Rh7CG281300 Rh7DG271200
rosa_wichuraiana	Rw3G014500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	196
AasI	GACNNNNNNGTC	1 cut(s)	236
Acc36I	ACCTGC	1 cut(s)	196
Acc65I	GGTACC	1 cut(s)	1211
AccB1I	GGYRCC	4 cut(s)	47, 350, 1211, 1658
AccBSI	CCGCTC	1 cut(s)	1935
AccII	CGCG	3 cut(s)	597, 1424, 1501
AccIII	TCCGGA	2 cut(s)	233, 614
AclWI	GGATC	6 cut(s)	503, 1062, 1742, 1954, 1967, 2096
AcoI	YGGCCR	5 cut(s)	150, 213, 261, 658, 1635
AcsI	RAATTY	2 cut(s)	902, 1991
AcuI	CTGAAG	3 cut(s)	1019, 1397, 1904
AfaI	GTAC	4 cut(s)	158, 1213, 1928, 1988
AfeI	AGCGCT	2 cut(s)	1560, 1915
AfiI	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
AjiI	CACGTC	1 cut(s)	1444
AjnI	CCWGG	6 cut(s)	126, 263, 940, 1467, 1962, 2085
AjuI	GAANNNNNNNTTGG	2 cut(s)	23, 55
AloI	GAACNNNNNNTCC	2 cut(s)	609, 641
Alw21I	GWGCWC	3 cut(s)	252, 1610, 1728
Alw26I	GTCTC	4 cut(s)	612, 689, 824, 1177
AlwI	GGATC	6 cut(s)	503, 1062, 1742, 1954, 1967, 2096
Ama87I	CYCGRG	1 cut(s)	2048
Aor13HI	TCCGGA	2 cut(s)	233, 614
Aor51HI	AGCGCT	2 cut(s)	1560, 1915
AoxI	GGCC	8 cut(s)	150, 213, 261, 279, 633, 658, 810, 1635
ApoI	RAATTY	2 cut(s)	902, 1991
AseI	ATTAAT	1 cut(s)	1140
Asp700I	GAANNNNTTC	2 cut(s)	736, 1104
Asp718I	GGTACC	1 cut(s)	1211
AspLEI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
AspS9I	GGNCC	4 cut(s)	79, 1088, 1348, 2043
AsuC2I	CCSGG	3 cut(s)	742, 2049, 2050
AsuHPI	GGTGA	7 cut(s)	184, 328, 544, 1010, 1065, 1444, 2147
AsuII	TTCGAA	1 cut(s)	534
AvaI	CYCGRG	1 cut(s)	2048
AvaII	GGWCC	4 cut(s)	79, 1088, 1348, 2043
BaeI	ACNNNNGTAYC	2 cut(s)	911, 944
BalI	TGGCCA	2 cut(s)	152, 1637
BamHI	GGATCC	1 cut(s)	1959
BanI	GGYRCC	4 cut(s)	47, 350, 1211, 1658
BanII	GRGCYC	1 cut(s)	252
BbsI	GAAGAC	2 cut(s)	1533, 1892
Bbv12I	GWGCWC	3 cut(s)	252, 1610, 1728
BbvCI	CCTCAGC	2 cut(s)	711, 1380
BccI	CCATC	5 cut(s)	263, 314, 557, 977, 1333
BceAI	ACGGC	2 cut(s)	346, 1381
BcgI	CGANNNNNNTGC	3 cut(s)	514, 548, 2137
BciT130I	CCWGG	6 cut(s)	128, 265, 942, 1469, 1964, 2087
BcnI	CCSGG	3 cut(s)	742, 2049, 2050
BcoDI	GTCTC	4 cut(s)	612, 689, 824, 1177
BfaI	CTAG	2 cut(s)	542, 1917
BfoI	RGCGCY	3 cut(s)	384, 1562, 1917
BfuAI	ACCTGC	1 cut(s)	196
BglII	AGATCT	1 cut(s)	1973
BlpI	GCTNAGC	1 cut(s)	1455
Bme1390I	CCNGG	9 cut(s)	128, 265, 742, 942, 1469, 1964, 2049, 2050, 2087
Bme18I	GGWCC	4 cut(s)	79, 1088, 1348, 2043
BmeT110I	CYCGRG	1 cut(s)	2048
BmgBI	CACGTC	1 cut(s)	1444
BmgT120I	GGNCC	4 cut(s)	79, 1088, 1348, 2043
BmiI	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
BmrFI	CCNGG	9 cut(s)	128, 265, 742, 942, 1469, 1964, 2049, 2050, 2087
BmrI	ACTGGG	1 cut(s)	351
BmsI	GCATC	4 cut(s)	342, 876, 1403, 1681
BmuI	ACTGGG	1 cut(s)	351
BpiI	GAAGAC	2 cut(s)	1533, 1892
BplI	GAGNNNNNCTC	2 cut(s)	1013, 1045
BpmI	CTGGAG	2 cut(s)	441, 1985
Bpu10I	CCTNAGC	3 cut(s)	711, 1380, 1784
Bpu1102I	GCTNAGC	1 cut(s)	1455
Bpu14I	TTCGAA	1 cut(s)	534
BpuEI	CTTGAG	3 cut(s)	266, 1159, 1600
BpuMI	CCSGG	3 cut(s)	742, 2049, 2050
BsaI	GGTCTC	2 cut(s)	689, 824
BsaWI	WCCGGW	3 cut(s)	233, 614, 1429
BsaXI	ACNNNNNCTCC	6 cut(s)	215, 245, 609, 639, 1368, 1398
Bsc4I	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
Bse118I	RCCGGY	1 cut(s)	166
Bse1I	ACTGG	5 cut(s)	282, 346, 661, 1638, 1660
Bse3DI	GCAATG	4 cut(s)	439, 639, 1187, 1762
BseAI	TCCGGA	2 cut(s)	233, 614
BseBI	CCWGG	6 cut(s)	128, 265, 942, 1469, 1964, 2087
BseGI	GGATG	4 cut(s)	274, 1477, 1494, 1675
BseLI	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
BseMI	GCAATG	4 cut(s)	439, 639, 1187, 1762
BseMII	CTCAG	6 cut(s)	246, 464, 702, 1371, 1446, 2134
BseNI	ACTGG	5 cut(s)	282, 346, 661, 1638, 1660
BseRI	GAGGAG	2 cut(s)	1607, 2018
BseYI	CCCAGC	1 cut(s)	889
BsgI	GTGCAG	1 cut(s)	1990
Bsh1236I	CGCG	3 cut(s)	597, 1424, 1501
Bsh1285I	CGRYCG	1 cut(s)	681
BshFI	GGCC	8 cut(s)	152, 215, 263, 281, 635, 660, 812, 1637
BshNI	GGYRCC	4 cut(s)	47, 350, 1211, 1658
BsiEI	CGRYCG	1 cut(s)	681
BsiHKAI	GWGCWC	3 cut(s)	252, 1610, 1728
BsiHKCI	CYCGRG	1 cut(s)	2048
BsiSI	CCGG	7 cut(s)	167, 234, 615, 645, 741, 1430, 2049
BsiWI	CGTACG	1 cut(s)	1926
BslFI	GGGAC	3 cut(s)	331, 1361, 2029
BslI	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
BsmAI	GTCTC	4 cut(s)	612, 689, 824, 1177
BsmFI	GGGAC	3 cut(s)	331, 1361, 2029
BsmI	GAATGC	2 cut(s)	421, 1945
BsnI	GGCC	8 cut(s)	152, 215, 263, 281, 635, 660, 812, 1637
Bso31I	GGTCTC	2 cut(s)	689, 824
BsoBI	CYCGRG	1 cut(s)	2048
Bsp119I	TTCGAA	1 cut(s)	534
Bsp1286I	GDGCHC	3 cut(s)	252, 1610, 1728
Bsp13I	TCCGGA	2 cut(s)	233, 614
Bsp1407I	TGTACA	1 cut(s)	1986
Bsp143I	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
Bsp1720I	GCTNAGC	1 cut(s)	1455
Bsp19I	CCATGG	2 cut(s)	1230, 1389
Bsp68I	TCGCGA	1 cut(s)	1424
BspANI	GGCC	8 cut(s)	152, 215, 263, 281, 635, 660, 812, 1637
BspCNI	CTCAG	6 cut(s)	247, 463, 703, 1372, 1447, 2133
BspEI	TCCGGA	2 cut(s)	233, 614
BspFNI	CGCG	3 cut(s)	597, 1424, 1501
BspLI	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
BspMI	ACCTGC	1 cut(s)	196
BspPI	GGATC	6 cut(s)	503, 1062, 1742, 1954, 1967, 2096
BspQI	GCTCTTC	1 cut(s)	1872
BspT104I	TTCGAA	1 cut(s)	534
BspT107I	GGYRCC	4 cut(s)	47, 350, 1211, 1658
BspTNI	GGTCTC	2 cut(s)	689, 824
BsrBI	CCGCTC	1 cut(s)	1935
BsrDI	GCAATG	4 cut(s)	439, 639, 1187, 1762
BsrFI	RCCGGY	1 cut(s)	166
BsrGI	TGTACA	1 cut(s)	1986
BsrI	ACTGG	5 cut(s)	282, 346, 661, 1638, 1660
BssAI	RCCGGY	1 cut(s)	166
BssMI	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
BssT1I	CCWWGG	3 cut(s)	672, 1230, 1389
Bst2UI	CCWGG	6 cut(s)	128, 265, 942, 1469, 1964, 2087
Bst4CI	ACNGT	6 cut(s)	47, 820, 1612, 1624, 1820, 2135
Bst6I	CTCTTC	3 cut(s)	462, 1038, 1872
BstAUI	TGTACA	1 cut(s)	1986
BstBI	TTCGAA	1 cut(s)	534
BstC8I	GCNNGC	5 cut(s)	52, 252, 587, 633, 1322
BstDSI	CCRYGG	4 cut(s)	595, 816, 1230, 1389
BstENI	CCTNNNNNAGG	1 cut(s)	765
BstF5I	GGATG	4 cut(s)	274, 1477, 1494, 1675
BstFNI	CGCG	3 cut(s)	597, 1424, 1501
BstH2I	RGCGCY	3 cut(s)	384, 1562, 1917
BstHHI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
BstKTI	GATC	7 cut(s)	498, 681, 1070, 1750, 1962, 1976, 2104
BstMAI	GTCTC	4 cut(s)	612, 689, 824, 1177
BstMBI	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
BstMCI	CGRYCG	1 cut(s)	681
BstNI	CCWGG	6 cut(s)	128, 265, 942, 1469, 1964, 2087
BstSCI	CCNGG	9 cut(s)	126, 263, 740, 940, 1467, 1962, 2047, 2048, 2085
BstUI	CGCG	3 cut(s)	597, 1424, 1501
BstV2I	GAAGAC	2 cut(s)	1533, 1892
BstX2I	RGATCY	2 cut(s)	1959, 1973
BstXI	CCANNNNNNTGG	1 cut(s)	841
BstYI	RGATCY	2 cut(s)	1959, 1973
BsuRI	GGCC	8 cut(s)	152, 215, 263, 281, 635, 660, 812, 1637
BtgI	CCRYGG	4 cut(s)	595, 816, 1230, 1389
BtrI	CACGTC	1 cut(s)	1444
BtsCI	GGATG	4 cut(s)	274, 1477, 1494, 1675
BtsI	GCAGTG	1 cut(s)	789
BtsIMutI	CAGTG	4 cut(s)	339, 789, 1620, 2128
BtuMI	TCGCGA	1 cut(s)	1424
BveI	ACCTGC	1 cut(s)	196
Cac8I	GCNNGC	5 cut(s)	52, 252, 587, 633, 1322
CfoI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
Cfr10I	RCCGGY	1 cut(s)	166
Cfr13I	GGNCC	4 cut(s)	79, 1088, 1348, 2043
Cfr42I	CCGCGG	1 cut(s)	598
Cfr9I	CCCGGG	1 cut(s)	2048
CseI	GACGC	1 cut(s)	1245
Csp6I	GTAC	4 cut(s)	157, 1212, 1927, 1987
CviQI	GTAC	4 cut(s)	157, 1212, 1927, 1987
DpnI	GATC	7 cut(s)	497, 680, 1069, 1749, 1961, 1975, 2103
DpnII	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
DrdI	GACNNNNNNGTC	1 cut(s)	236
DseDI	GACNNNNNNGTC	1 cut(s)	236
EaeI	YGGCCR	5 cut(s)	150, 213, 261, 658, 1635
Eam1104I	CTCTTC	3 cut(s)	462, 1038, 1872
EarI	CTCTTC	3 cut(s)	462, 1038, 1872
Ecl136II	GAGCTC	1 cut(s)	250
Eco130I	CCWWGG	3 cut(s)	672, 1230, 1389
Eco24I	GRGCYC	1 cut(s)	252
Eco31I	GGTCTC	2 cut(s)	689, 824
Eco32I	GATATC	1 cut(s)	1494
Eco47I	GGWCC	4 cut(s)	79, 1088, 1348, 2043
Eco47III	AGCGCT	2 cut(s)	1560, 1915
Eco53kI	GAGCTC	1 cut(s)	250
Eco57I	CTGAAG	3 cut(s)	1019, 1397, 1904
Eco88I	CYCGRG	1 cut(s)	2048
EcoICRI	GAGCTC	1 cut(s)	250
EcoNI	CCTNNNNNAGG	1 cut(s)	765
EcoO109I	RGGNCCY	2 cut(s)	1348, 2043
EcoRII	CCWGG	6 cut(s)	126, 263, 940, 1467, 1962, 2085
EcoRV	GATATC	1 cut(s)	1494
EcoT14I	CCWWGG	3 cut(s)	672, 1230, 1389
EcoT38I	GRGCYC	1 cut(s)	252
ErhI	CCWWGG	3 cut(s)	672, 1230, 1389
FalI	AAGNNNNNCTT	2 cut(s)	756, 788
FaqI	GGGAC	3 cut(s)	331, 1361, 2029
FauI	CCCGC	2 cut(s)	97, 1928
FokI	GGATG	4 cut(s)	281, 1484, 1501, 1662
FriOI	GRGCYC	1 cut(s)	252
FspBI	CTAG	2 cut(s)	542, 1917
GlaI	GCGC	5 cut(s)	143, 382, 1500, 1560, 1915
GsaI	CCCAGC	1 cut(s)	893
GsuI	CTGGAG	2 cut(s)	441, 1985
HaeII	RGCGCY	3 cut(s)	384, 1562, 1917
HaeIII	GGCC	8 cut(s)	152, 215, 263, 281, 635, 660, 812, 1637
HapII	CCGG	7 cut(s)	167, 234, 615, 645, 741, 1430, 2049
HgaI	GACGC	1 cut(s)	1245
HhaI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
Hin6I	GCGC	5 cut(s)	142, 381, 1499, 1559, 1914
HinP1I	GCGC	5 cut(s)	142, 381, 1499, 1559, 1914
HincII	GTYRAC	3 cut(s)	1477, 1522, 1631
HindII	GTYRAC	3 cut(s)	1477, 1522, 1631
HindIII	AAGCTT	2 cut(s)	242, 1040
HpaII	CCGG	7 cut(s)	167, 234, 615, 645, 741, 1430, 2049
HphI	GGTGA	7 cut(s)	184, 328, 544, 1010, 1065, 1444, 2147
Hpy166II	GTNNAC	6 cut(s)	1091, 1477, 1522, 1631, 2073, 2138
Hpy188I	TCNGA	8 cut(s)	79, 453, 495, 856, 948, 1038, 1067, 1408
Hpy8I	GTNNAC	6 cut(s)	1091, 1477, 1522, 1631, 2073, 2138
Hpy99I	CGWCG	1 cut(s)	1684
HpyAV	CCTTC	2 cut(s)	271, 761
HpyCH4III	ACNGT	6 cut(s)	47, 820, 1612, 1624, 1820, 2135
HpyCH4IV	ACGT	1 cut(s)	1443
HpyCH4V	TGCA	9 cut(s)	54, 386, 511, 757, 962, 1192, 1755, 1777, 1971
HpySE526I	ACGT	1 cut(s)	1443
HspAI	GCGC	5 cut(s)	142, 381, 1499, 1559, 1914
KflI	GGGWCCC	1 cut(s)	1348
Kpn2I	TCCGGA	2 cut(s)	233, 614
KpnI	GGTACC	1 cut(s)	1215
KspI	CCGCGG	1 cut(s)	598
Kzo9I	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
LguI	GCTCTTC	1 cut(s)	1872
LmnI	GCTCC	4 cut(s)	95, 1376, 1669, 1723
LweI	GCATC	4 cut(s)	342, 876, 1403, 1681
MaeI	CTAG	2 cut(s)	542, 1917
MaeII	ACGT	1 cut(s)	1443
MaeIII	GTNAC	3 cut(s)	1151, 1432, 2060
MalI	GATC	7 cut(s)	497, 680, 1069, 1749, 1961, 1975, 2103
MbiI	CCGCTC	1 cut(s)	1935
MboI	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
MboII	GAAGA	7 cut(s)	449, 1025, 1533, 1843, 1843, 1889, 1897
MfeI	CAATTG	2 cut(s)	1218, 1251
MflI	RGATCY	2 cut(s)	1959, 1973
MhlI	GDGCHC	3 cut(s)	252, 1610, 1728
MlsI	TGGCCA	2 cut(s)	152, 1637
MluNI	TGGCCA	2 cut(s)	152, 1637
MmeI	TCCRAC	3 cut(s)	21, 709, 2108
Mox20I	TGGCCA	2 cut(s)	152, 1637
MroI	TCCGGA	2 cut(s)	233, 614
MroXI	GAANNNNTTC	2 cut(s)	736, 1104
MscI	TGGCCA	2 cut(s)	152, 1637
MseI	TTAA	8 cut(s)	27, 138, 401, 1044, 1140, 1529, 1614, 1772
MslI	CAYNNNNRTG	1 cut(s)	1078
Msp20I	TGGCCA	2 cut(s)	152, 1637
MspA1I	CMGCKG	4 cut(s)	101, 597, 631, 710
MspI	CCGG	7 cut(s)	167, 234, 615, 645, 741, 1430, 2049
MspR9I	CCNGG	9 cut(s)	128, 265, 742, 942, 1469, 1964, 2049, 2050, 2087
MunI	CAATTG	2 cut(s)	1218, 1251
Mva1269I	GAATGC	2 cut(s)	421, 1945
MvaI	CCWGG	6 cut(s)	128, 265, 942, 1469, 1964, 2087
MvnI	CGCG	3 cut(s)	597, 1424, 1501
NciI	CCSGG	3 cut(s)	742, 2049, 2050
NcoI	CCATGG	2 cut(s)	1230, 1389
NdeII	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
NlaIV	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
NmuCI	GTSAC	3 cut(s)	1151, 1432, 2060
NruI	TCGCGA	1 cut(s)	1424
NspV	TTCGAA	1 cut(s)	534
PaqCI	CACCTGC	1 cut(s)	196
PciSI	GCTCTTC	1 cut(s)	1872
PctI	GAATGC	2 cut(s)	421, 1945
PdmI	GAANNNNTTC	2 cut(s)	736, 1104
PfeI	GAWTC	5 cut(s)	408, 531, 1426, 1686, 1948
Pfl23II	CGTACG	1 cut(s)	1926
PfoI	TCCNGGA	1 cut(s)	1962
Ple19I	CGATCG	1 cut(s)	681
PpuMI	RGGWCCY	2 cut(s)	1348, 2043
PshBI	ATTAAT	1 cut(s)	1140
Psp124BI	GAGCTC	1 cut(s)	252
Psp5II	RGGWCCY	2 cut(s)	1348, 2043
Psp6I	CCWGG	6 cut(s)	126, 263, 940, 1467, 1962, 2085
PspFI	CCCAGC	1 cut(s)	889
PspGI	CCWGG	6 cut(s)	126, 263, 940, 1467, 1962, 2085
PspLI	CGTACG	1 cut(s)	1926
PspN4I	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
PspPI	GGNCC	4 cut(s)	79, 1088, 1348, 2043
PspPPI	RGGWCCY	2 cut(s)	1348, 2043
PsuI	RGATCY	2 cut(s)	1959, 1973
PvuI	CGATCG	1 cut(s)	681
PvuII	CAGCTG	1 cut(s)	631
RruI	TCGCGA	1 cut(s)	1424
RsaI	GTAC	4 cut(s)	158, 1213, 1928, 1988
RsaNI	GTAC	4 cut(s)	157, 1212, 1927, 1987
RseI	CAYNNNNRTG	1 cut(s)	1078
SacI	GAGCTC	1 cut(s)	252
SacII	CCGCGG	1 cut(s)	598
SapI	GCTCTTC	1 cut(s)	1872
SaqAI	TTAA	8 cut(s)	27, 138, 401, 1044, 1140, 1529, 1614, 1772
Sau3AI	GATC	7 cut(s)	495, 678, 1067, 1747, 1959, 1973, 2101
Sau96I	GGNCC	4 cut(s)	79, 1088, 1348, 2043
ScrFI	CCNGG	9 cut(s)	128, 265, 742, 942, 1469, 1964, 2049, 2050, 2087
SduI	GDGCHC	3 cut(s)	252, 1610, 1728
SfaNI	GCATC	4 cut(s)	342, 876, 1403, 1681
Sfr303I	CCGCGG	1 cut(s)	598
SfuI	TTCGAA	1 cut(s)	534
SgrBI	CCGCGG	1 cut(s)	598
SinI	GGWCC	4 cut(s)	79, 1088, 1348, 2043
SmaI	CCCGGG	1 cut(s)	2050
SmiMI	CAYNNNNRTG	1 cut(s)	1078
SmlI	CTYRAG	3 cut(s)	245, 1174, 1579
SmoI	CTYRAG	3 cut(s)	245, 1174, 1579
SspMI	CTAG	2 cut(s)	542, 1917
SstI	GAGCTC	1 cut(s)	252
StyD4I	CCNGG	9 cut(s)	126, 263, 740, 940, 1467, 1962, 2047, 2048, 2085
StyI	CCWWGG	3 cut(s)	672, 1230, 1389
TaaI	ACNGT	6 cut(s)	47, 820, 1612, 1624, 1820, 2135
TaiI	ACGT	1 cut(s)	1446
TaqI	TCGA	7 cut(s)	534, 828, 900, 1128, 1682, 2112, 2147
TaqII	GACCGA	1 cut(s)	1076
TatI	WGTACW	2 cut(s)	156, 1986
TauI	GCSGC	4 cut(s)	104, 215, 600, 710
TfiI	GAWTC	5 cut(s)	408, 531, 1426, 1686, 1948
Tru1I	TTAA	8 cut(s)	27, 138, 401, 1044, 1140, 1529, 1614, 1772
Tru9I	TTAA	8 cut(s)	27, 138, 401, 1044, 1140, 1529, 1614, 1772
TscAI	CASTG	4 cut(s)	346, 796, 1627, 2128
TseFI	GTSAC	3 cut(s)	1151, 1432, 2060
Tsp45I	GTSAC	3 cut(s)	1151, 1432, 2060
TspDTI	ATGAA	1 cut(s)	1851
TspGWI	ACGGA	2 cut(s)	61, 1668
TspMI	CCCGGG	1 cut(s)	2048
TspRI	CASTG	4 cut(s)	346, 796, 1627, 2128
VpaK11BI	GGWCC	4 cut(s)	79, 1088, 1348, 2043
VspI	ATTAAT	1 cut(s)	1140
XagI	CCTNNNNNAGG	1 cut(s)	765
XapI	RAATTY	2 cut(s)	902, 1991
XmaI	CCCGGG	1 cut(s)	2048
XmnI	GAANNNNTTC	2 cut(s)	736, 1104
XspI	CTAG	2 cut(s)	542, 1917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.