Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0008260

Physical Location & Seq

Genomic Coordinates Forward (+)

14030335 .. 14033933

Gene Structure 3599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG154000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGAGACCATAACCCAGAATGGAAACCACCAGAATGGGATCCAAAACGGTTCCTTGGACGATCTCTGCGTCAAAACAGAGTCCCTCAAAGCAGAGCTCTCTGTTTCGGACCCGCTTAACTGGGGAGCGGCGGCGGAGTTAATGGCAGGCAGCCACCTTGATGAAGTGAAGCGCATGGTGGCCGAGTACAGGAAGCCAGTGGTGAAACTCGGTGGAAAATCCTTGACTATTTCTCAGGTGGCAGCTATAGCCAACCATGACTCTGGTGTCAAGGTTGAACTGGCTGAGTCGGCCAGGGCTGGTGTGAAGGCCAGTAGTGATTGGGTCATGGAGTCCATGAACAAGGGTACGGACAGCTATGGTGTCACCACCGGGTTCGGTGCAACCTCCCACAGACGAACCAAACAAGGCGCTGCTCTTCAGAAAGAGCTTATTAGATTCTTGAATGCTGGAGTATTTGGCAACGGAACAGAGTCTCACACCCTGCCTCACTCTGCAACAAGAGCAGCCATGCTCGTTAGAATCAACACTCTCCTGCAAGGCTACTCAGGCATAAGATTCGAAATCTTAGAAGCCATCACCAAGTTTCTCAACCACAATATTACTCCCTGCTTGCCTCTCCGCGGCACGATCACCGCCTCCGGAGACCTTGTGCCGCTGTCCTACATCGCCGGACTACTGACTGGCCGCCCCAATTCCAAGGCAGTCGGGCCAAAAGGCGAGACCCTCAATGCCGTTCAGGCTTTCGAACAGGTCGGTATCAGCTCAGGGTTCTTCGAATTGCAGCCCAAAGAAGGACTGGCTCTTGTTAATGGTACTGCTGTTGGCTCTGGCTTGGCCTCCACGGTTCTTTTCGAGACCAACATTTTGGCCTTGCTTTCCGAAATCTTGTCTGCGATTTTCGCTGAAGTAATGCAAGGGAAGCCCGAGTTTACAGACCACCTGACACACAAGTTAAAGCACCATCCTGGTCAAATTGAGGCTGCTGCAATTATGGAATACATTTTGGATGGCAGTGATTACGTTAAAGCTGCTAAGAAGCTACACGAGCAGGACCCGCTTCAGAAGCCTAAACAAGACCGTTACGCTCTGCGAACCTCACCACAATGGCTCGGTCCACAAATTGAAGTGATTCGGTTTTCGACTAAATCTATCGAGAGGGAGATTAATTCTGTAAATGACAACCCTTTGATTGATGTTTCAAGGAACAAGGCATTGCATGGTGGCAACTTCCAGGGTACGCCAATTGGAGTGTCCATGGATAACACCCGTTTGGCTATTGCATCCATTGGGAAGCTCATGTTTGCTCAGTTTTCGGAACTCGTCAATGACTTTTACAACAACGGCTTGCCGTCCAATTTGTCCGGTGGGAGGAACCCAAGTTTGGATTACGGCTTTAAGGGAGCTGAGATTGCCATGGCATCTTATTGTTCTGAGCTTCAGTTTCTCGCAAATCCAGTGACTAACCATGTCCAGAGTGCTGAGCAGCACAACCAGGATGTCAACTCTTTGGGGTTGATTTCGTCACGAAAAACCGCAGAAGCTGTTGACATACTGAAGCTCATGTCTTCCACATTTATGGTAGCGCTTTGCCAAGCTATTGACTTGAGGCATTTGGAGGAGAACTTGAAGAGCACGGTTAAGAACACTGTGAGTCAATTGGCCAAGAGGCTTTTGACTACCGGGGTTAATGGAGAGCTTCACCCTTCAAGATTTTGCGAGAAGGATTTGCTTATGGTGGTTGAAAGGGAGTACCTTTTCGCCTACATTGACGATCCTTGCAGCGCAACATATCCCTTAATGCAGAGGCTAAGGCAAGTGCTTGTTGAACACGCTTTGACAAATGGTGAGAATGAGAAGAATGCAAACACTTCAATTTTCCAAAAGATTTCGGCATTTGAGGAAGAGCTGAAGACCATTTTGCCTAAAGAGGTTGAGAGCGCTAGGGCTGCATACGAGAGCGGGAATGCTGCGATTCCAAACAGAATCATCGAGTGCAGGTCTTATCCTTTGTACAAATTTGTGAGGGAGGAGTTGGGGGGAGAGTTCCTGACTGGCGAAAAGTTCAGGTCCCCCGGGGAGGAGTGTGACAAGGTTTTCACAGCTATGTGCCAGGGGAAAATCATTGATCCGATTCTCGATTGCCTCAGTGGTTGGAACGGTGAACCTCTTCCGATCTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009636 GO:0009698 GO:0009699 GO:0009719 GO:0009725 GO:0009739 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0016598 GO:0016829 GO:0016840 GO:0016841 GO:0019438 GO:0019538 GO:0019748 GO:0019941 GO:0030163 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044550 GO:0045548 GO:0046677 GO:0046898 GO:0050896 GO:0051603 GO:0060992 GO:0071704 GO:0097305 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901654 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00360 ko00940 ko01100 ko01110 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

Lyase_aromatic

Protein Analysis

727

Amino Acids

79.3

Weight (kDa)

5.97

Isoelectric Point (pI)

33.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_aromatic	PF00221	75 - 550	1.4e-153	Aromatic amino acid lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0008260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37040 AT3G53260
fragaria_vesca	FvH4_6g16060
malus_domestica	MD04G1096200.v1.1 MD12G1116700.v1.1
prunus_persica	Prupe.6G235400_v2.0.a1
pyrus_communis	pycom04g09130 pycom12g11580
rosa_chinensis	RchiOBHm_Chr3g0469861 RchiOBHm_Chr7g0212181
rosa_laevigata	RLG00000002917 RLG00000024317
rosa_multiflora	Rmu_sc0006102.1_g000012
rosa_roxburghii	Rroxscaffold_6G00411420
rosa_rugosa	Rorug03G0105200
rosa_samantha	Rh3AG154000 Rh3BG178100 Rh3CG168800 Rh3DG197100 Rh7AG264800 Rh7CG281300 Rh7DG271200
rosa_wichuraiana	Rw3G014500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	266
Acc36I	ACCTGC	1 cut(s)	1989
AccBSI	CCGCTC	2 cut(s)	128, 1962
AccII	CGCG	1 cut(s)	624
AccIII	TCCGGA	1 cut(s)	641
AclWI	GGATC	4 cut(s)	34, 47, 1769, 2123
AcoI	YGGCCR	4 cut(s)	180, 291, 685, 1662
AcsI	RAATTY	1 cut(s)	2018
AcuI	CTGAAG	6 cut(s)	404, 927, 1046, 1424, 1577, 1931
AfaI	GTAC	6 cut(s)	188, 349, 817, 1240, 1754, 2015
AfeI	AGCGCT	2 cut(s)	1587, 1942
AfiI	CCNNNNNNNGG	6 cut(s)	189, 623, 794, 1371, 1384, 2080
AgsI	TTSAA	9 cut(s)	278, 445, 1127, 1203, 1630, 1710, 1745, 1829, 1875
AjnI	CCWGG	5 cut(s)	293, 967, 1233, 1494, 2112
AjuI	GAANNNNNNNTTGG	2 cut(s)	1367, 1399
Alw21I	GWGCWC	2 cut(s)	99, 1637
Alw26I	GTCTC	4 cut(s)	480, 639, 716, 851
AlwI	GGATC	4 cut(s)	34, 47, 1769, 2123
AlwNI	CAGNNNCTG	1 cut(s)	1544
Ama87I	CYCGRG	2 cut(s)	926, 2075
Aor13HI	TCCGGA	1 cut(s)	641
Aor51HI	AGCGCT	2 cut(s)	1587, 1942
AoxI	GGCC	8 cut(s)	180, 291, 309, 685, 710, 837, 870, 1662
ApoI	RAATTY	1 cut(s)	2018
ArsI	GACNNNNNNTTYG	2 cut(s)	850, 882
AseI	ATTAAT	1 cut(s)	1167
Asp700I	GAANNNNTTC	2 cut(s)	1131, 2169
AspLEI	GCGC	5 cut(s)	174, 413, 1588, 1787, 1943
AspS9I	GGNCC	5 cut(s)	109, 710, 1054, 1115, 2070
AsuC2I	CCSGG	4 cut(s)	373, 1684, 2076, 2077
AsuHPI	GGTGA	8 cut(s)	214, 358, 571, 625, 1092, 1694, 1859, 2174
AsuII	TTCGAA	3 cut(s)	561, 747, 777
AvaI	CYCGRG	2 cut(s)	926, 2075
AvaII	GGWCC	4 cut(s)	109, 1054, 1115, 2070
BaeI	ACNNNNGTAYC	2 cut(s)	807, 840
BalI	TGGCCA	1 cut(s)	1664
BamHI	GGATCC	1 cut(s)	39
BanII	GRGCYC	1 cut(s)	99
BauI	CACGAG	1 cut(s)	1046
BbsI	GAAGAC	2 cut(s)	1560, 1919
Bbv12I	GWGCWC	2 cut(s)	99, 1637
BccI	CCATC	3 cut(s)	584, 972, 1004
BceAI	ACGGC	4 cut(s)	719, 1336, 1360, 1408
BcgI	CGANNNNNNTGC	2 cut(s)	541, 575
BciT130I	CCWGG	5 cut(s)	295, 969, 1235, 1496, 2114
BcnI	CCSGG	4 cut(s)	373, 1684, 2076, 2077
BcoDI	GTCTC	4 cut(s)	480, 639, 716, 851
BfaI	CTAG	2 cut(s)	1944, 2182
BfmI	CTRYAG	1 cut(s)	246
BfoI	RGCGCY	3 cut(s)	414, 1589, 1944
BfuAI	ACCTGC	1 cut(s)	1989
BglI	GCCNNNNNGGC	1 cut(s)	740
BlpI	GCTNAGC	1 cut(s)	1482
Bme1390I	CCNGG	9 cut(s)	295, 373, 969, 1235, 1496, 1684, 2076, 2077, 2114
Bme18I	GGWCC	4 cut(s)	109, 1054, 1115, 2070
BmeT110I	CYCGRG	2 cut(s)	926, 2075
BmgT120I	GGNCC	5 cut(s)	109, 710, 1054, 1115, 2070
BmiI	GGNNCC	6 cut(s)	41, 52, 111, 1056, 1376, 2072
BmrFI	CCNGG	9 cut(s)	295, 373, 969, 1235, 1496, 1684, 2076, 2077, 2114
BmrI	ACTGGG	1 cut(s)	130
BmsI	GCATC	2 cut(s)	1292, 1430
BmuI	ACTGGG	1 cut(s)	130
BpiI	GAAGAC	2 cut(s)	1560, 1919
BpmI	CTGGAG	1 cut(s)	471
Bpu10I	CCTNAGC	2 cut(s)	766, 1811
Bpu1102I	GCTNAGC	1 cut(s)	1482
Bpu14I	TTCGAA	3 cut(s)	561, 747, 777
BpuEI	CTTGAG	1 cut(s)	1627
BpuMI	CCSGG	4 cut(s)	373, 1684, 2076, 2077
BsaI	GGTCTC	3 cut(s)	639, 716, 851
BsaWI	WCCGGW	2 cut(s)	641, 1364
BsaXI	ACNNNNNCTCC	2 cut(s)	636, 666
Bsc4I	CCNNNNNNNGG	6 cut(s)	189, 623, 794, 1371, 1384, 2080
Bse1I	ACTGG	8 cut(s)	125, 197, 285, 312, 688, 804, 1457, 2059
Bse3DI	GCAATG	1 cut(s)	1214
BseAI	TCCGGA	1 cut(s)	641
BseBI	CCWGG	5 cut(s)	295, 969, 1235, 1496, 2114
BseGI	GGATG	4 cut(s)	964, 1015, 1283, 1504
BseLI	CCNNNNNNNGG	6 cut(s)	189, 623, 794, 1371, 1384, 2080
BseMI	GCAATG	1 cut(s)	1214
BseMII	CTCAG	9 cut(s)	248, 276, 561, 780, 1322, 1398, 1425, 1473, 2161
BseNI	ACTGG	8 cut(s)	125, 197, 285, 312, 688, 804, 1457, 2059
BseRI	GAGGAG	3 cut(s)	1634, 2045, 2096
BsgI	GTGCAG	1 cut(s)	2017
Bsh1236I	CGCG	1 cut(s)	624
BshFI	GGCC	8 cut(s)	182, 293, 311, 687, 712, 839, 872, 1664
BsiHKAI	GWGCWC	2 cut(s)	99, 1637
BsiHKCI	CYCGRG	2 cut(s)	926, 2075
BsiSI	CCGG	6 cut(s)	372, 642, 672, 1365, 1683, 2076
BslFI	GGGAC	2 cut(s)	67, 2056
BslI	CCNNNNNNNGG	6 cut(s)	189, 623, 794, 1371, 1384, 2080
BsmAI	GTCTC	4 cut(s)	480, 639, 716, 851
BsmFI	GGGAC	2 cut(s)	67, 2056
BsmI	GAATGC	3 cut(s)	451, 1867, 1972
BsnI	GGCC	8 cut(s)	182, 293, 311, 687, 712, 839, 872, 1664
Bso31I	GGTCTC	3 cut(s)	639, 716, 851
BsoBI	CYCGRG	2 cut(s)	926, 2075
Bsp119I	TTCGAA	3 cut(s)	561, 747, 777
Bsp1286I	GDGCHC	2 cut(s)	99, 1637
Bsp13I	TCCGGA	1 cut(s)	641
Bsp1407I	TGTACA	1 cut(s)	2013
Bsp143I	GATC	6 cut(s)	39, 61, 630, 1774, 2128, 2175
Bsp1720I	GCTNAGC	1 cut(s)	1482
Bsp19I	CCATGG	2 cut(s)	1257, 1416
BspANI	GGCC	8 cut(s)	182, 293, 311, 687, 712, 839, 872, 1664
BspCNI	CTCAG	9 cut(s)	247, 277, 560, 779, 1321, 1399, 1426, 1474, 2160
BspEI	TCCGGA	1 cut(s)	641
BspFNI	CGCG	1 cut(s)	624
BspLI	GGNNCC	6 cut(s)	41, 52, 111, 1056, 1376, 2072
BspMI	ACCTGC	1 cut(s)	1989
BspPI	GGATC	4 cut(s)	34, 47, 1769, 2123
BspQI	GCTCTTC	3 cut(s)	423, 1625, 1899
BspT104I	TTCGAA	3 cut(s)	561, 747, 777
BspTNI	GGTCTC	3 cut(s)	639, 716, 851
BsrBI	CCGCTC	2 cut(s)	128, 1962
BsrDI	GCAATG	1 cut(s)	1214
BsrGI	TGTACA	1 cut(s)	2013
BsrI	ACTGG	8 cut(s)	125, 197, 285, 312, 688, 804, 1457, 2059
BssMI	GATC	6 cut(s)	39, 61, 630, 1774, 2128, 2175
BssSI	CACGAG	1 cut(s)	1046
BssT1I	CCWWGG	4 cut(s)	54, 699, 1257, 1416
Bst2BI	CACGAG	1 cut(s)	1046
Bst2UI	CCWGG	5 cut(s)	295, 969, 1235, 1496, 2114
Bst4CI	ACNGT	6 cut(s)	50, 847, 1082, 1639, 1651, 2162
Bst6I	CTCTTC	4 cut(s)	423, 1625, 1899, 2175
BstAUI	TGTACA	1 cut(s)	2013
BstBI	TTCGAA	3 cut(s)	561, 747, 777
BstC8I	GCNNGC	3 cut(s)	148, 614, 1349
BstDSI	CCRYGG	4 cut(s)	622, 843, 1257, 1416
BstF5I	GGATG	4 cut(s)	964, 1015, 1283, 1504
BstFNI	CGCG	1 cut(s)	624
BstH2I	RGCGCY	3 cut(s)	414, 1589, 1944
BstHHI	GCGC	5 cut(s)	174, 413, 1588, 1787, 1943
BstKTI	GATC	6 cut(s)	42, 64, 633, 1777, 2131, 2178
BstMAI	GTCTC	4 cut(s)	480, 639, 716, 851
BstMBI	GATC	6 cut(s)	39, 61, 630, 1774, 2128, 2175
BstNI	CCWGG	5 cut(s)	295, 969, 1235, 1496, 2114
BstSCI	CCNGG	9 cut(s)	293, 371, 967, 1233, 1494, 1682, 2074, 2075, 2112
BstSFI	CTRYAG	1 cut(s)	246
BstUI	CGCG	1 cut(s)	624
BstV2I	GAAGAC	2 cut(s)	1560, 1919
BstX2I	RGATCY	1 cut(s)	39
BstXI	CCANNNNNNTGG	4 cut(s)	35, 263, 868, 1579
BstYI	RGATCY	1 cut(s)	39
BsuRI	GGCC	8 cut(s)	182, 293, 311, 687, 712, 839, 872, 1664
BtgI	CCRYGG	4 cut(s)	622, 843, 1257, 1416
BtgZI	GCGATG	1 cut(s)	652
BtsCI	GGATG	4 cut(s)	964, 1015, 1283, 1504
BtsI	GCAGTG	1 cut(s)	1021
BtsIMutI	CAGTG	5 cut(s)	204, 1021, 1464, 1647, 2155
BveI	ACCTGC	1 cut(s)	1989
Cac8I	GCNNGC	3 cut(s)	148, 614, 1349
CaiI	CAGNNNCTG	1 cut(s)	1544
CfoI	GCGC	5 cut(s)	174, 413, 1588, 1787, 1943
Cfr13I	GGNCC	5 cut(s)	109, 710, 1054, 1115, 2070
Cfr42I	CCGCGG	1 cut(s)	625
Cfr9I	CCCGGG	1 cut(s)	2075
CseI	GACGC	1 cut(s)	58
Csp6I	GTAC	6 cut(s)	187, 348, 816, 1239, 1753, 2014
CviQI	GTAC	6 cut(s)	187, 348, 816, 1239, 1753, 2014
DpnI	GATC	6 cut(s)	41, 63, 632, 1776, 2130, 2177
DpnII	GATC	6 cut(s)	39, 61, 630, 1774, 2128, 2175
DrdI	GACNNNNNNGTC	1 cut(s)	266
DseDI	GACNNNNNNGTC	1 cut(s)	266
EaeI	YGGCCR	4 cut(s)	180, 291, 685, 1662
Eam1104I	CTCTTC	4 cut(s)	423, 1625, 1899, 2175
EarI	CTCTTC	4 cut(s)	423, 1625, 1899, 2175
EciI	GGCGGA	1 cut(s)	149
Ecl136II	GAGCTC	1 cut(s)	97
Eco130I	CCWWGG	4 cut(s)	54, 699, 1257, 1416
Eco24I	GRGCYC	1 cut(s)	99
Eco31I	GGTCTC	3 cut(s)	639, 716, 851
Eco47I	GGWCC	4 cut(s)	109, 1054, 1115, 2070
Eco47III	AGCGCT	2 cut(s)	1587, 1942
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	6 cut(s)	404, 927, 1046, 1424, 1577, 1931
Eco88I	CYCGRG	2 cut(s)	926, 2075
EcoICRI	GAGCTC	1 cut(s)	97
EcoO109I	RGGNCCY	2 cut(s)	1054, 2070
EcoRII	CCWGG	5 cut(s)	293, 967, 1233, 1494, 2112
EcoT14I	CCWWGG	4 cut(s)	54, 699, 1257, 1416
EcoT38I	GRGCYC	1 cut(s)	99
ErhI	CCWWGG	4 cut(s)	54, 699, 1257, 1416
FaqI	GGGAC	2 cut(s)	67, 2056
FauI	CCCGC	3 cut(s)	120, 1065, 1955
FokI	GGATG	4 cut(s)	951, 1022, 1270, 1511
FriOI	GRGCYC	1 cut(s)	99
FspBI	CTAG	2 cut(s)	1944, 2182
GlaI	GCGC	5 cut(s)	173, 412, 1587, 1786, 1942
GsuI	CTGGAG	1 cut(s)	471
HaeII	RGCGCY	3 cut(s)	414, 1589, 1944
HaeIII	GGCC	8 cut(s)	182, 293, 311, 687, 712, 839, 872, 1664
HapII	CCGG	6 cut(s)	372, 642, 672, 1365, 1683, 2076
HgaI	GACGC	1 cut(s)	58
HhaI	GCGC	5 cut(s)	174, 413, 1588, 1787, 1943
Hin6I	GCGC	5 cut(s)	172, 411, 1586, 1785, 1941
HinP1I	GCGC	5 cut(s)	172, 411, 1586, 1785, 1941
HincII	GTYRAC	2 cut(s)	1504, 1549
HindII	GTYRAC	2 cut(s)	1504, 1549
HpaII	CCGG	6 cut(s)	372, 642, 672, 1365, 1683, 2076
HphI	GGTGA	8 cut(s)	214, 358, 571, 625, 1092, 1694, 1859, 2174
Hpy166II	GTNNAC	5 cut(s)	933, 1118, 1504, 1549, 2165
Hpy188I	TCNGA	8 cut(s)	109, 423, 883, 1065, 1318, 1435, 2133, 2175
Hpy188III	TCNNGA	9 cut(s)	442, 642, 856, 1156, 1474, 1527, 1710, 2050, 2138
Hpy8I	GTNNAC	5 cut(s)	933, 1118, 1504, 1549, 2165
HpyAV	CCTTC	4 cut(s)	301, 788, 1716, 1717
HpyCH4III	ACNGT	6 cut(s)	50, 847, 1082, 1639, 1651, 2162
HpyCH4IV	ACGT	1 cut(s)	1023
HpySE526I	ACGT	1 cut(s)	1023
HspAI	GCGC	5 cut(s)	172, 411, 1586, 1785, 1941
Kpn2I	TCCGGA	1 cut(s)	641
KspI	CCGCGG	1 cut(s)	625
Kzo9I	GATC	6 cut(s)	39, 61, 630, 1774, 2128, 2175
LguI	GCTCTTC	3 cut(s)	423, 1625, 1899
LmnI	GCTCC	2 cut(s)	125, 1403
LweI	GCATC	2 cut(s)	1292, 1430
MaeI	CTAG	2 cut(s)	1944, 2182
MaeII	ACGT	1 cut(s)	1023
MaeIII	GTNAC	5 cut(s)	364, 1082, 1459, 1524, 2087
MalI	GATC	6 cut(s)	41, 63, 632, 1776, 2130, 2177
MbiI	CCGCTC	2 cut(s)	128, 1962
MboI	GATC	6 cut(s)	39, 61, 630, 1774, 2128, 2175
MboII	GAAGA	8 cut(s)	410, 766, 1560, 1642, 1870, 1916, 1924, 2162
MfeI	CAATTG	2 cut(s)	1245, 1658
MflI	RGATCY	1 cut(s)	39
MhlI	GDGCHC	2 cut(s)	99, 1637
MlsI	TGGCCA	1 cut(s)	1664
MluNI	TGGCCA	1 cut(s)	1664
MlyI	GAGTC	6 cut(s)	89, 254, 296, 341, 482, 1663
MmeI	TCCRAC	1 cut(s)	2135
Mox20I	TGGCCA	1 cut(s)	1664
MroI	TCCGGA	1 cut(s)	641
MroXI	GAANNNNTTC	2 cut(s)	1131, 2169
MscI	TGGCCA	1 cut(s)	1664
MslI	CAYNNNNRTG	5 cut(s)	33, 159, 1105, 1577, 2105
Msp20I	TGGCCA	1 cut(s)	1664
MspA1I	CMGCKG	2 cut(s)	624, 658
MspI	CCGG	6 cut(s)	372, 642, 672, 1365, 1683, 2076
MspR9I	CCNGG	9 cut(s)	295, 373, 969, 1235, 1496, 1684, 2076, 2077, 2114
MunI	CAATTG	2 cut(s)	1245, 1658
Mva1269I	GAATGC	3 cut(s)	451, 1867, 1972
MvaI	CCWGG	5 cut(s)	295, 969, 1235, 1496, 2114
MvnI	CGCG	1 cut(s)	624
NciI	CCSGG	4 cut(s)	373, 1684, 2076, 2077
NcoI	CCATGG	2 cut(s)	1257, 1416
NdeII	GATC	6 cut(s)	39, 61, 630, 1774, 2128, 2175
NlaIV	GGNNCC	6 cut(s)	41, 52, 111, 1056, 1376, 2072
NmeAIII	GCCGAG	1 cut(s)	208
NmuCI	GTSAC	4 cut(s)	364, 1459, 1524, 2087
NspV	TTCGAA	3 cut(s)	561, 747, 777
PciSI	GCTCTTC	3 cut(s)	423, 1625, 1899
PcsI	WCGNNNNNNNCGW	1 cut(s)	66
PctI	GAATGC	3 cut(s)	451, 1867, 1972
PdmI	GAANNNNTTC	2 cut(s)	1131, 2169
PfeI	GAWTC	7 cut(s)	438, 522, 558, 1132, 1975, 1986, 2134
PleI	GAGTC	6 cut(s)	88, 254, 295, 340, 481, 1662
PpsI	GAGTC	6 cut(s)	88, 254, 295, 340, 481, 1662
PpuMI	RGGWCCY	2 cut(s)	1054, 2070
PshBI	ATTAAT	1 cut(s)	1167
Psp124BI	GAGCTC	1 cut(s)	99
Psp5II	RGGWCCY	2 cut(s)	1054, 2070
Psp6I	CCWGG	5 cut(s)	293, 967, 1233, 1494, 2112
PspGI	CCWGG	5 cut(s)	293, 967, 1233, 1494, 2112
PspN4I	GGNNCC	6 cut(s)	41, 52, 111, 1056, 1376, 2072
PspPI	GGNCC	5 cut(s)	109, 710, 1054, 1115, 2070
PspPPI	RGGWCCY	2 cut(s)	1054, 2070
PstNI	CAGNNNCTG	1 cut(s)	1544
PsuI	RGATCY	1 cut(s)	39
RsaI	GTAC	6 cut(s)	188, 349, 817, 1240, 1754, 2015
RsaNI	GTAC	6 cut(s)	187, 348, 816, 1239, 1753, 2014
RseI	CAYNNNNRTG	5 cut(s)	33, 159, 1105, 1577, 2105
SacI	GAGCTC	1 cut(s)	99
SacII	CCGCGG	1 cut(s)	625
SapI	GCTCTTC	3 cut(s)	423, 1625, 1899
Sau3AI	GATC	6 cut(s)	39, 61, 630, 1774, 2128, 2175
Sau96I	GGNCC	5 cut(s)	109, 710, 1054, 1115, 2070
SchI	GAGTC	6 cut(s)	89, 254, 296, 341, 482, 1663
ScrFI	CCNGG	9 cut(s)	295, 373, 969, 1235, 1496, 1684, 2076, 2077, 2114
SduI	GDGCHC	2 cut(s)	99, 1637
SfaNI	GCATC	2 cut(s)	1292, 1430
SfcI	CTRYAG	1 cut(s)	246
Sfr303I	CCGCGG	1 cut(s)	625
SfuI	TTCGAA	3 cut(s)	561, 747, 777
SgrBI	CCGCGG	1 cut(s)	625
SinI	GGWCC	4 cut(s)	109, 1054, 1115, 2070
SmaI	CCCGGG	1 cut(s)	2077
SmiMI	CAYNNNNRTG	5 cut(s)	33, 159, 1105, 1577, 2105
SmlI	CTYRAG	1 cut(s)	1606
SmoI	CTYRAG	1 cut(s)	1606
SspI	AATATT	1 cut(s)	601
SspMI	CTAG	2 cut(s)	1944, 2182
SstI	GAGCTC	1 cut(s)	99
StyD4I	CCNGG	9 cut(s)	293, 371, 967, 1233, 1494, 1682, 2074, 2075, 2112
StyI	CCWWGG	4 cut(s)	54, 699, 1257, 1416
TaaI	ACNGT	6 cut(s)	50, 847, 1082, 1639, 1651, 2162
TaiI	ACGT	1 cut(s)	1026
TaqI	TCGA	8 cut(s)	561, 747, 777, 855, 1142, 1155, 1992, 2139
TaqII	GACCGA	1 cut(s)	1103
TatI	WGTACW	2 cut(s)	186, 2013
TauI	GCSGC	5 cut(s)	131, 134, 627, 658, 690
TfiI	GAWTC	7 cut(s)	438, 522, 558, 1132, 1975, 1986, 2134
TscAI	CASTG	5 cut(s)	204, 1021, 1464, 1654, 2155
TseFI	GTSAC	4 cut(s)	364, 1459, 1524, 2087
Tsp45I	GTSAC	4 cut(s)	364, 1459, 1524, 2087
TspDTI	ATGAA	2 cut(s)	177, 353
TspGWI	ACGGA	2 cut(s)	365, 480
TspMI	CCCGGG	1 cut(s)	2075
TspRI	CASTG	5 cut(s)	204, 1021, 1464, 1654, 2155
VpaK11BI	GGWCC	4 cut(s)	109, 1054, 1115, 2070
VspI	ATTAAT	1 cut(s)	1167
XapI	RAATTY	1 cut(s)	2018
XcmI	CCANNNNNNNNNTGG	1 cut(s)	796
XmaI	CCCGGG	1 cut(s)	2075
XmnI	GAANNNNTTC	2 cut(s)	1131, 2169
XspI	CTAG	2 cut(s)	1944, 2182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.