Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008260

Physical Location & Seq

Genomic Coordinates Reverse (-)

41751181 .. 41754606

Gene Structure 3426 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002917

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGGAGACCATAACCAAGAAAGGGATTAAGAACGATTTGTTGGACGGTGCCTGCACTAAAACAGAGCACTTCGTTTCGGACCCTTTGAATTGGGGAGTAGCGGCGGAGTCAATGACAGGCAGCCACCTGGACGAAGTTAAGCGCATGGTGGCCGAGTACAGGAATCCGGTGGTGAAGCTCGGTGGAGAAACCTTGACTATCTCGCAGGTGGCGGCCATAGCGAACCATGACTCCGGAGTCAAGCTTGAGCTCGCTGAGTCGGCCAGGGATGGTGTGAAGGCCAGTAGTGATTGGGTCATGGACTCCATCAACAATGGGACTGATACTTACGGTATCACCACTGGGTTCGGTGCCACCTCCCACAGACGAAGCAAACAAGGCGCTGCATTACAAAACGAGTTAATTAGATTCTTGAATGCTGGAGTATTTGGCAATGGAACAGAGTCAGCTCAGACTCTTCCTCACTCTACCACAAGAGCAGCCATGCTTGTTCGGATCAATACACTCCTGCAAGGCTACTCTGGCATAAGATTCGAAATCTTAGAAGCCATCACCAAGTTTCTCAACCACAATATTACTCCATGCTTGCCTCTCCGCGGCACAATAACCGCCTCCGGAGACATTGTTCAGCTGGCCTACATTGCCGGAATACTAACGGGCCGACCCAATTCTAAGGCGATCGGGTCAAAAGGCGAGACCCTCAATGCCGCTGAGGCTTTCAAACAAGTTGGAATTAGTTCCGGGTTCTTTGAGTTGCAGCCTAAAGAAGGACTTGCTCTTGTGAATGGCACTGCTGTTGGGTCTGGCTTGGCCTCCACGGTTCTTTTCGAGACCAATATCTTGGCTTTGCTGTCCGAAATCTTGTCTGCAGTTGTCGTTGAAGTGATGCTGGGGAGGCTCGAATTTACAGACCACTTGATACACAAGTTGAAGCACCACCCTGGTCAGATTGAGGCTGCTGCAATTATGGAATACATTTTGGATGGCAGTTCTTATGGTGAAGTTGCTAAGAAGCAATACGAGCTGGACTCTCTTCAGAAGCTTAAACAAGACCGCTACGCTCTCCGATCCTCACCACAATGGCTCGGTCCACAAATTGAAGTTATTCGGTTTTCCACCAAATCTATCGAGAGGGAGATTAATTCTGTTAGTGACAACCCTTTGATTGATGTCTCAAGGAATAAGGCATTGCATTGTGGCAACTTCCAGGGTACCCCAATTGGAGTGTCCATGGATAACACTCGCTTGGCAATTTCGTCCATTGGAAAGCTCATGTTTGCTCAATTTACAGAACTTGTCAATGACTCTTACAACAATGGCTTGCCATCAAGTTTATCGGGAGGGAGGGACCCAAGTTTGGATTACGGCTTAAAGGGAGCTGAGGTTGCCATGGCATCTTATTGTTCAGAGCTTCAGTTTCTCGCGAATCCGGTGACAAACCACGTCCAGAGTGCTGAGCAGCACAACCAGGATGTCAACTCATTGGGGATGATATCGGCGCGAATGACCAAGGAAGCTGTTGACATATTAAAGCTCATGTCTTCCACATTCTTAGTAGCGCTCTGCCAAGCTATTGACTTGAGGCACTTGGAGGAGAACTTAGAGAGCACAGTTAAGAACACTGTGAGTCAACTAGCCAAGAGGGTTTTGACTACTGGCACCAATGGGGAGCATCACCCATTGAGATTCTGTGAGAATGATTTGCTTATGGTTGTTGAAAGGGAGCACCTTTTCGCCTACATTGACGATCCTTGCAATGCTACATATCCCTTAATGCAAAGGCTAAGGCAAGTGCTTGTTGAACACGCTTTGACAAATGGTGAGAATGAGAAGAATGAACACACTTCAATCTTCCAAAAGATTTCAGCTCTTGAGCAAGAGCTGAAGACCATTTTGCCTAAAGAGATTGAGAGCGCTAGGGCTGCGTACGAGAGCGGGAATGCTGCTATTCCAAACAGGATCCTGGAGTGCAGGTCTTATCCTTTGTACAAATTTGTGAGGGAGGAGTTGGGGGGAGAGTTCTTGACGGGCGAAAAAGTCAGGTCCCCTGGGGAGGAGTGTGACAAGGTATTCACGGCTATGTGCCAGGGGAAAATCATTGATCCCATTCTCGATTGCCTCAGTGGTTGGAATGGTAAACCTCTTTCGATTTTGTTGCCCAATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009636 GO:0009698 GO:0009699 GO:0009719 GO:0009725 GO:0009739 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0016598 GO:0016829 GO:0016840 GO:0016841 GO:0019438 GO:0019538 GO:0019748 GO:0019941 GO:0030163 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044550 GO:0045548 GO:0046677 GO:0046898 GO:0050896 GO:0051603 GO:0060992 GO:0071704 GO:0097305 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901654 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00360 ko00940 ko01100 ko01110 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

Lyase_aromatic

Protein Analysis

723

Amino Acids

78.87

Weight (kDa)

5.65

Isoelectric Point (pI)

34.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_aromatic	PF00221	65 - 541	7.9e-149	Aromatic amino acid lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37040 AT3G53260
fragaria_vesca	FvH4_6g16060
malus_domestica	MD04G1096200.v1.1 MD12G1116700.v1.1
prunus_persica	Prupe.6G235400_v2.0.a1
pyrus_communis	pycom04g09130 pycom12g11580
rosa_chinensis	RchiOBHm_Chr3g0469861 RchiOBHm_Chr7g0212181
rosa_laevigata	RLG00000002917 RLG00000024317
rosa_multiflora	Rmu_sc0006102.1_g000012
rosa_roxburghii	Rroxscaffold_6G00411420
rosa_rugosa	Rorug03G0105200
rosa_samantha	Rh3AG154000 Rh3BG178100 Rh3CG168800 Rh3DG197100 Rh7AG264800 Rh7CG281300 Rh7DG271200
rosa_wichuraiana	Rw3G014500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	196
AasI	GACNNNNNNGTC	1 cut(s)	236
Acc36I	ACCTGC	2 cut(s)	196, 1962
Acc65I	GGTACC	1 cut(s)	1211
AccB1I	GGYRCC	4 cut(s)	47, 350, 1211, 1658
AccBSI	CCGCTC	1 cut(s)	1935
AccII	CGCG	3 cut(s)	597, 1424, 1501
AccIII	TCCGGA	2 cut(s)	233, 614
AciI	CCGC	9 cut(s)	101, 104, 212, 595, 597, 609, 708, 1054, 1935
AclWI	GGATC	6 cut(s)	503, 1062, 1742, 1954, 1967, 2096
AcoI	YGGCCR	3 cut(s)	150, 213, 261
AcsI	RAATTY	2 cut(s)	902, 1991
AcuI	CTGAAG	3 cut(s)	1019, 1397, 1904
AfaI	GTAC	4 cut(s)	158, 1213, 1928, 1988
AfeI	AGCGCT	2 cut(s)	1560, 1915
AfiI	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
AgsI	TTSAA	9 cut(s)	88, 415, 721, 881, 931, 1100, 1718, 1802, 1848
AjiI	CACGTC	1 cut(s)	1444
AjnI	CCWGG	8 cut(s)	126, 263, 940, 1206, 1467, 1962, 2047, 2085
AjuI	GAANNNNNNNTTGG	2 cut(s)	23, 55
AloI	GAACNNNNNNTCC	4 cut(s)	215, 247, 609, 641
Alw21I	GWGCWC	4 cut(s)	69, 252, 1610, 1728
Alw26I	GTCTC	4 cut(s)	612, 689, 824, 1177
AlwI	GGATC	6 cut(s)	503, 1062, 1742, 1954, 1967, 2096
Aor13HI	TCCGGA	2 cut(s)	233, 614
Aor51HI	AGCGCT	2 cut(s)	1560, 1915
AoxI	GGCC	7 cut(s)	150, 213, 261, 279, 633, 658, 810
ApeKI	GCWGC	9 cut(s)	120, 383, 479, 757, 956, 959, 1459, 1922, 1943
ApoI	RAATTY	2 cut(s)	902, 1991
AseI	ATTAAT	1 cut(s)	1140
Asp700I	GAANNNNTTC	2 cut(s)	736, 1104
Asp718I	GGTACC	1 cut(s)	1211
AspLEI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
AspS9I	GGNCC	5 cut(s)	79, 658, 1088, 1348, 2043
AsuC2I	CCSGG	1 cut(s)	742
AsuHPI	GGTGA	8 cut(s)	184, 328, 544, 1010, 1065, 1444, 1667, 1832
AsuII	TTCGAA	1 cut(s)	534
AvaII	GGWCC	4 cut(s)	79, 1088, 1348, 2043
BaeI	ACNNNNGTAYC	2 cut(s)	911, 944
BamHI	GGATCC	1 cut(s)	1959
BanI	GGYRCC	4 cut(s)	47, 350, 1211, 1658
BanII	GRGCYC	1 cut(s)	252
BbsI	GAAGAC	2 cut(s)	1533, 1892
Bbv12I	GWGCWC	4 cut(s)	69, 252, 1610, 1728
BbvCI	CCTCAGC	2 cut(s)	711, 1380
BbvI	GCAGC	9 cut(s)	132, 370, 491, 769, 943, 946, 1471, 1909, 1930
BccI	CCATC	5 cut(s)	263, 314, 557, 977, 1333
BceAI	ACGGC	2 cut(s)	1381, 2091
BcgI	CGANNNNNNTGC	3 cut(s)	514, 548, 2137
BciT130I	CCWGG	8 cut(s)	128, 265, 942, 1208, 1469, 1964, 2049, 2087
BcnI	CCSGG	1 cut(s)	742
BcoDI	GTCTC	4 cut(s)	612, 689, 824, 1177
BfaI	CTAG	2 cut(s)	1634, 1917
BfmI	CTRYAG	1 cut(s)	867
BfoI	RGCGCY	3 cut(s)	384, 1562, 1917
BfuAI	ACCTGC	2 cut(s)	196, 1962
BglI	GCCNNNNNGGC	1 cut(s)	713
BlpI	GCTNAGC	1 cut(s)	1455
Bme1390I	CCNGG	9 cut(s)	128, 265, 742, 942, 1208, 1469, 1964, 2049, 2087
Bme18I	GGWCC	4 cut(s)	79, 1088, 1348, 2043
BmgBI	CACGTC	1 cut(s)	1444
BmgT120I	GGNCC	5 cut(s)	79, 658, 1088, 1348, 2043
BmiI	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
BmrFI	CCNGG	9 cut(s)	128, 265, 742, 942, 1208, 1469, 1964, 2049, 2087
BmrI	ACTGGG	1 cut(s)	351
BmsI	GCATC	3 cut(s)	876, 1403, 1681
BmuI	ACTGGG	1 cut(s)	351
BpiI	GAAGAC	2 cut(s)	1533, 1892
BplI	GAGNNNNNCTC	2 cut(s)	1013, 1045
BpmI	CTGGAG	2 cut(s)	441, 1985
Bpu10I	CCTNAGC	3 cut(s)	711, 1380, 1784
Bpu1102I	GCTNAGC	1 cut(s)	1455
Bpu14I	TTCGAA	1 cut(s)	534
BpuEI	CTTGAG	4 cut(s)	266, 1159, 1600, 1892
BpuMI	CCSGG	1 cut(s)	742
BsaI	GGTCTC	2 cut(s)	689, 824
BsaWI	WCCGGW	4 cut(s)	166, 233, 614, 1429
BsaXI	ACNNNNNCTCC	8 cut(s)	215, 245, 609, 639, 1368, 1398, 1958, 1988
Bsc4I	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
Bse1I	ACTGG	3 cut(s)	282, 346, 1660
Bse3DI	GCAATG	4 cut(s)	439, 639, 1187, 1762
BseAI	TCCGGA	2 cut(s)	233, 614
BseBI	CCWGG	8 cut(s)	128, 265, 942, 1208, 1469, 1964, 2049, 2087
BseGI	GGATG	4 cut(s)	274, 988, 1477, 1494
BseLI	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
BseMI	GCAATG	4 cut(s)	439, 639, 1187, 1762
BseMII	CTCAG	6 cut(s)	246, 464, 702, 1371, 1446, 2134
BseNI	ACTGG	3 cut(s)	282, 346, 1660
BseRI	GAGGAG	3 cut(s)	1607, 2018, 2069
BseXI	GCAGC	9 cut(s)	132, 370, 491, 769, 943, 946, 1471, 1909, 1930
BseYI	CCCAGC	1 cut(s)	889
BsgI	GTGCAG	2 cut(s)	37, 1990
Bsh1236I	CGCG	3 cut(s)	597, 1424, 1501
Bsh1285I	CGRYCG	1 cut(s)	681
BshFI	GGCC	7 cut(s)	152, 215, 263, 281, 635, 660, 812
BshNI	GGYRCC	4 cut(s)	47, 350, 1211, 1658
BsiEI	CGRYCG	1 cut(s)	681
BsiHKAI	GWGCWC	4 cut(s)	69, 252, 1610, 1728
BsiSI	CCGG	6 cut(s)	167, 234, 615, 645, 741, 1430
BsiWI	CGTACG	1 cut(s)	1926
BslFI	GGGAC	3 cut(s)	331, 1361, 2029
BslI	CCNNNNNNNGG	6 cut(s)	21, 159, 596, 767, 1357, 2053
BsmAI	GTCTC	4 cut(s)	612, 689, 824, 1177
BsmFI	GGGAC	3 cut(s)	331, 1361, 2029
BsmI	GAATGC	2 cut(s)	421, 1945
BsnI	GGCC	7 cut(s)	152, 215, 263, 281, 635, 660, 812
Bso31I	GGTCTC	2 cut(s)	689, 824
Bsp119I	TTCGAA	1 cut(s)	534
Bsp1286I	GDGCHC	4 cut(s)	69, 252, 1610, 1728
Bsp13I	TCCGGA	2 cut(s)	233, 614
Bsp1407I	TGTACA	1 cut(s)	1986
Bsp143I	GATC	6 cut(s)	495, 678, 1067, 1747, 1959, 2101
Bsp1720I	GCTNAGC	1 cut(s)	1455
Bsp19I	CCATGG	2 cut(s)	1230, 1389
Bsp68I	TCGCGA	1 cut(s)	1424
BspACI	CCGC	9 cut(s)	101, 104, 212, 595, 597, 609, 708, 1054, 1935
BspANI	GGCC	7 cut(s)	152, 215, 263, 281, 635, 660, 812
BspCNI	CTCAG	6 cut(s)	247, 463, 703, 1372, 1447, 2133
BspEI	TCCGGA	2 cut(s)	233, 614
BspFNI	CGCG	3 cut(s)	597, 1424, 1501
BspLI	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
BspMAI	CTGCAG	1 cut(s)	871
BspMI	ACCTGC	2 cut(s)	196, 1962
BspPI	GGATC	6 cut(s)	503, 1062, 1742, 1954, 1967, 2096
BspT104I	TTCGAA	1 cut(s)	534
BspT107I	GGYRCC	4 cut(s)	47, 350, 1211, 1658
BspTNI	GGTCTC	2 cut(s)	689, 824
BsrBI	CCGCTC	1 cut(s)	1935
BsrDI	GCAATG	4 cut(s)	439, 639, 1187, 1762
BsrGI	TGTACA	1 cut(s)	1986
BsrI	ACTGG	3 cut(s)	282, 346, 1660
BssMI	GATC	6 cut(s)	495, 678, 1067, 1747, 1959, 2101
BssT1I	CCWWGG	3 cut(s)	1230, 1389, 1509
Bst2UI	CCWGG	8 cut(s)	128, 265, 942, 1208, 1469, 1964, 2049, 2087
Bst4CI	ACNGT	5 cut(s)	47, 332, 820, 1612, 1624
Bst6I	CTCTTC	2 cut(s)	462, 1038
BstAUI	TGTACA	1 cut(s)	1986
BstBI	TTCGAA	1 cut(s)	534
BstC8I	GCNNGC	5 cut(s)	52, 252, 587, 633, 1322
BstDSI	CCRYGG	4 cut(s)	595, 816, 1230, 1389
BstENI	CCTNNNNNAGG	1 cut(s)	765
BstF5I	GGATG	4 cut(s)	274, 988, 1477, 1494
BstFNI	CGCG	3 cut(s)	597, 1424, 1501
BstH2I	RGCGCY	3 cut(s)	384, 1562, 1917
BstHHI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
BstKTI	GATC	6 cut(s)	498, 681, 1070, 1750, 1962, 2104
BstMAI	GTCTC	4 cut(s)	612, 689, 824, 1177
BstMBI	GATC	6 cut(s)	495, 678, 1067, 1747, 1959, 2101
BstMCI	CGRYCG	1 cut(s)	681
BstNI	CCWGG	8 cut(s)	128, 265, 942, 1208, 1469, 1964, 2049, 2087
BstSCI	CCNGG	9 cut(s)	126, 263, 740, 940, 1206, 1467, 1962, 2047, 2085
BstSFI	CTRYAG	1 cut(s)	867
BstUI	CGCG	3 cut(s)	597, 1424, 1501
BstV1I	GCAGC	9 cut(s)	132, 370, 491, 769, 943, 946, 1471, 1909, 1930
BstV2I	GAAGAC	2 cut(s)	1533, 1892
BstX2I	RGATCY	1 cut(s)	1959
BstXI	CCANNNNNNTGG	1 cut(s)	841
BstYI	RGATCY	1 cut(s)	1959
BsuRI	GGCC	7 cut(s)	152, 215, 263, 281, 635, 660, 812
BtgI	CCRYGG	4 cut(s)	595, 816, 1230, 1389
BtrI	CACGTC	1 cut(s)	1444
BtsCI	GGATG	4 cut(s)	274, 988, 1477, 1494
BtsI	GCAGTG	1 cut(s)	789
BtsIMutI	CAGTG	4 cut(s)	339, 789, 1620, 2128
BtuMI	TCGCGA	1 cut(s)	1424
BveI	ACCTGC	2 cut(s)	196, 1962
Cac8I	GCNNGC	5 cut(s)	52, 252, 587, 633, 1322
CfoI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
Cfr13I	GGNCC	5 cut(s)	79, 658, 1088, 1348, 2043
Cfr42I	CCGCGG	1 cut(s)	598
Csp6I	GTAC	4 cut(s)	157, 1212, 1927, 1987
CviAII	CATG	9 cut(s)	145, 227, 298, 484, 582, 1231, 1273, 1390, 1537
CviQI	GTAC	4 cut(s)	157, 1212, 1927, 1987
DpnI	GATC	6 cut(s)	497, 680, 1069, 1749, 1961, 2103
DpnII	GATC	6 cut(s)	495, 678, 1067, 1747, 1959, 2101
DrdI	GACNNNNNNGTC	1 cut(s)	236
DseDI	GACNNNNNNGTC	1 cut(s)	236
EaeI	YGGCCR	3 cut(s)	150, 213, 261
Eam1104I	CTCTTC	2 cut(s)	462, 1038
EarI	CTCTTC	2 cut(s)	462, 1038
EciI	GGCGGA	1 cut(s)	119
Ecl136II	GAGCTC	1 cut(s)	250
Eco130I	CCWWGG	3 cut(s)	1230, 1389, 1509
Eco24I	GRGCYC	1 cut(s)	252
Eco31I	GGTCTC	2 cut(s)	689, 824
Eco32I	GATATC	1 cut(s)	1494
Eco47I	GGWCC	4 cut(s)	79, 1088, 1348, 2043
Eco47III	AGCGCT	2 cut(s)	1560, 1915
Eco53kI	GAGCTC	1 cut(s)	250
Eco57I	CTGAAG	3 cut(s)	1019, 1397, 1904
EcoICRI	GAGCTC	1 cut(s)	250
EcoNI	CCTNNNNNAGG	1 cut(s)	765
EcoO109I	RGGNCCY	2 cut(s)	1348, 2043
EcoRII	CCWGG	8 cut(s)	126, 263, 940, 1206, 1467, 1962, 2047, 2085
EcoRV	GATATC	1 cut(s)	1494
EcoT14I	CCWWGG	3 cut(s)	1230, 1389, 1509
EcoT38I	GRGCYC	1 cut(s)	252
ErhI	CCWWGG	3 cut(s)	1230, 1389, 1509
FaeI	CATG	9 cut(s)	148, 230, 301, 487, 585, 1234, 1276, 1393, 1540
FalI	AAGNNNNNCTT	2 cut(s)	756, 788
FaqI	GGGAC	3 cut(s)	331, 1361, 2029
FatI	CATG	9 cut(s)	144, 226, 297, 483, 581, 1230, 1272, 1389, 1536
FauI	CCCGC	1 cut(s)	1928
FokI	GGATG	4 cut(s)	281, 995, 1484, 1501
FriOI	GRGCYC	1 cut(s)	252
FspBI	CTAG	2 cut(s)	1634, 1917
GlaI	GCGC	5 cut(s)	143, 382, 1500, 1560, 1915
GsaI	CCCAGC	1 cut(s)	893
GsuI	CTGGAG	2 cut(s)	441, 1985
HaeII	RGCGCY	3 cut(s)	384, 1562, 1917
HaeIII	GGCC	7 cut(s)	152, 215, 263, 281, 635, 660, 812
HapII	CCGG	6 cut(s)	167, 234, 615, 645, 741, 1430
HhaI	GCGC	5 cut(s)	144, 383, 1501, 1561, 1916
Hin1II	CATG	9 cut(s)	148, 230, 301, 487, 585, 1234, 1276, 1393, 1540
Hin6I	GCGC	5 cut(s)	142, 381, 1499, 1559, 1914
HinP1I	GCGC	5 cut(s)	142, 381, 1499, 1559, 1914
HincII	GTYRAC	3 cut(s)	1477, 1522, 1631
HindII	GTYRAC	3 cut(s)	1477, 1522, 1631
HindIII	AAGCTT	2 cut(s)	242, 1040
HpaII	CCGG	6 cut(s)	167, 234, 615, 645, 741, 1430
HphI	GGTGA	8 cut(s)	184, 328, 544, 1010, 1065, 1444, 1667, 1832
Hpy166II	GTNNAC	5 cut(s)	1091, 1477, 1522, 1631, 2138
Hpy188I	TCNGA	8 cut(s)	79, 453, 495, 856, 948, 1038, 1067, 1408
Hpy8I	GTNNAC	5 cut(s)	1091, 1477, 1522, 1631, 2138
HpyAV	CCTTC	2 cut(s)	271, 761
HpyCH4III	ACNGT	5 cut(s)	47, 332, 820, 1612, 1624
HpyCH4IV	ACGT	1 cut(s)	1443
HpySE526I	ACGT	1 cut(s)	1443
Hsp92II	CATG	9 cut(s)	148, 230, 301, 487, 585, 1234, 1276, 1393, 1540
HspAI	GCGC	5 cut(s)	142, 381, 1499, 1559, 1914
KflI	GGGWCCC	1 cut(s)	1348
Kpn2I	TCCGGA	2 cut(s)	233, 614
KpnI	GGTACC	1 cut(s)	1215
KspI	CCGCGG	1 cut(s)	598
Kzo9I	GATC	6 cut(s)	495, 678, 1067, 1747, 1959, 2101
LmnI	GCTCC	3 cut(s)	1376, 1669, 1723
Lsp1109I	GCAGC	9 cut(s)	132, 370, 491, 769, 943, 946, 1471, 1909, 1930
LweI	GCATC	3 cut(s)	876, 1403, 1681
MaeI	CTAG	2 cut(s)	1634, 1917
MaeII	ACGT	1 cut(s)	1443
MaeIII	GTNAC	3 cut(s)	1151, 1432, 2060
MalI	GATC	6 cut(s)	497, 680, 1069, 1749, 1961, 2103
MbiI	CCGCTC	1 cut(s)	1935
MboI	GATC	6 cut(s)	495, 678, 1067, 1747, 1959, 2101
MboII	GAAGA	6 cut(s)	449, 1025, 1533, 1843, 1843, 1897
MfeI	CAATTG	1 cut(s)	1218
MflI	RGATCY	1 cut(s)	1959
MhlI	GDGCHC	4 cut(s)	69, 252, 1610, 1728
MmeI	TCCRAC	3 cut(s)	21, 709, 2108
MroI	TCCGGA	2 cut(s)	233, 614
MroXI	GAANNNNTTC	2 cut(s)	736, 1104
MseI	TTAA	9 cut(s)	27, 138, 401, 1044, 1140, 1370, 1529, 1614, 1772
MslI	CAYNNNNRTG	2 cut(s)	1078, 2078
MspA1I	CMGCKG	3 cut(s)	597, 631, 710
MspI	CCGG	6 cut(s)	167, 234, 615, 645, 741, 1430
MspR9I	CCNGG	9 cut(s)	128, 265, 742, 942, 1208, 1469, 1964, 2049, 2087
MunI	CAATTG	1 cut(s)	1218
Mva1269I	GAATGC	2 cut(s)	421, 1945
MvaI	CCWGG	8 cut(s)	128, 265, 942, 1208, 1469, 1964, 2049, 2087
MvnI	CGCG	3 cut(s)	597, 1424, 1501
NciI	CCSGG	1 cut(s)	742
NcoI	CCATGG	2 cut(s)	1230, 1389
NdeII	GATC	6 cut(s)	495, 678, 1067, 1747, 1959, 2101
NlaIII	CATG	9 cut(s)	148, 230, 301, 487, 585, 1234, 1276, 1393, 1540
NlaIV	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
NmeAIII	GCCGAG	1 cut(s)	178
NmuCI	GTSAC	3 cut(s)	1151, 1432, 2060
NruI	TCGCGA	1 cut(s)	1424
NspV	TTCGAA	1 cut(s)	534
PaqCI	CACCTGC	1 cut(s)	196
PasI	CCCWGGG	1 cut(s)	2048
PctI	GAATGC	2 cut(s)	421, 1945
PdmI	GAANNNNTTC	2 cut(s)	736, 1104
PfeI	GAWTC	5 cut(s)	163, 408, 531, 1426, 1686
Pfl23II	CGTACG	1 cut(s)	1926
PfoI	TCCNGGA	1 cut(s)	1962
Ple19I	CGATCG	1 cut(s)	681
PpuMI	RGGWCCY	2 cut(s)	1348, 2043
PshBI	ATTAAT	1 cut(s)	1140
Psp124BI	GAGCTC	1 cut(s)	252
Psp5II	RGGWCCY	2 cut(s)	1348, 2043
Psp6I	CCWGG	8 cut(s)	126, 263, 940, 1206, 1467, 1962, 2047, 2085
PspFI	CCCAGC	1 cut(s)	889
PspGI	CCWGG	8 cut(s)	126, 263, 940, 1206, 1467, 1962, 2047, 2085
PspLI	CGTACG	1 cut(s)	1926
PspN4I	GGNNCC	9 cut(s)	49, 81, 352, 1213, 1349, 1350, 1660, 1961, 2045
PspPI	GGNCC	5 cut(s)	79, 658, 1088, 1348, 2043
PspPPI	RGGWCCY	2 cut(s)	1348, 2043
PstI	CTGCAG	1 cut(s)	871
PsuI	RGATCY	1 cut(s)	1959
PvuI	CGATCG	1 cut(s)	681
PvuII	CAGCTG	1 cut(s)	631
RruI	TCGCGA	1 cut(s)	1424
RsaI	GTAC	4 cut(s)	158, 1213, 1928, 1988
RsaNI	GTAC	4 cut(s)	157, 1212, 1927, 1987
RseI	CAYNNNNRTG	2 cut(s)	1078, 2078
SacI	GAGCTC	1 cut(s)	252
SacII	CCGCGG	1 cut(s)	598
SaqAI	TTAA	9 cut(s)	27, 138, 401, 1044, 1140, 1370, 1529, 1614, 1772
Sau3AI	GATC	6 cut(s)	495, 678, 1067, 1747, 1959, 2101
Sau96I	GGNCC	5 cut(s)	79, 658, 1088, 1348, 2043
ScrFI	CCNGG	9 cut(s)	128, 265, 742, 942, 1208, 1469, 1964, 2049, 2087
SduI	GDGCHC	4 cut(s)	69, 252, 1610, 1728
SfaNI	GCATC	3 cut(s)	876, 1403, 1681
SfcI	CTRYAG	1 cut(s)	867
Sfr303I	CCGCGG	1 cut(s)	598
SfuI	TTCGAA	1 cut(s)	534
SgrBI	CCGCGG	1 cut(s)	598
SinI	GGWCC	4 cut(s)	79, 1088, 1348, 2043
SmiMI	CAYNNNNRTG	2 cut(s)	1078, 2078
SmlI	CTYRAG	4 cut(s)	245, 1174, 1579, 1871
SmoI	CTYRAG	4 cut(s)	245, 1174, 1579, 1871
SsiI	CCGC	9 cut(s)	101, 104, 212, 595, 597, 609, 708, 1054, 1935
SspI	AATATT	1 cut(s)	574
SspMI	CTAG	2 cut(s)	1634, 1917
SstI	GAGCTC	1 cut(s)	252
StyD4I	CCNGG	9 cut(s)	126, 263, 740, 940, 1206, 1467, 1962, 2047, 2085
StyI	CCWWGG	3 cut(s)	1230, 1389, 1509
TaaI	ACNGT	5 cut(s)	47, 332, 820, 1612, 1624
TaiI	ACGT	1 cut(s)	1446
TaqI	TCGA	6 cut(s)	534, 828, 900, 1128, 2112, 2147
TaqII	GACCGA	1 cut(s)	1076
TatI	WGTACW	2 cut(s)	156, 1986
TauI	GCSGC	4 cut(s)	104, 215, 600, 710
TfiI	GAWTC	5 cut(s)	163, 408, 531, 1426, 1686
Tru1I	TTAA	9 cut(s)	27, 138, 401, 1044, 1140, 1370, 1529, 1614, 1772
Tru9I	TTAA	9 cut(s)	27, 138, 401, 1044, 1140, 1370, 1529, 1614, 1772
TscAI	CASTG	4 cut(s)	346, 796, 1627, 2128
TseFI	GTSAC	3 cut(s)	1151, 1432, 2060
TseI	GCWGC	9 cut(s)	120, 383, 479, 757, 956, 959, 1459, 1922, 1943
Tsp45I	GTSAC	3 cut(s)	1151, 1432, 2060
TspDTI	ATGAA	1 cut(s)	1851
TspRI	CASTG	4 cut(s)	346, 796, 1627, 2128
VpaK11BI	GGWCC	4 cut(s)	79, 1088, 1348, 2043
VspI	ATTAAT	1 cut(s)	1140
XagI	CCTNNNNNAGG	1 cut(s)	765
XapI	RAATTY	2 cut(s)	902, 1991
XmnI	GAANNNNTTC	2 cut(s)	736, 1104
XspI	CTAG	2 cut(s)	1634, 1917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.