FvH4_6g20410

Protein virilizer homolog

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
14033416 .. 14052670
19255 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g20410.t2

Sequence Viewer

Length: 5802 bp
ATGGGTCGGCCGGAGCCTTGCGTCTTGTTCGCCCAGACCTTCGTCCACCCCCATCTCGATGAATACGTCGACGAGGTTTTGTTTGCTGAGCCGATTGTGATCACTGCTTGCGAGTTTCTTGAACACAACACCTCGTCGGCTTCACAAGCAGTGCCCCTTTTAGGGGCTACTTTACCTCCTTCATTTGCTTTGGAGGTATTTGTACAATGCGAGGGAGAGACAAGATTCAGGCGCCTCTGTCAGCCTTTCCTGTATTCCCCTTCATCATCAAATGTGCTAGAAGTAGAGGCTGTTGTAACTAATCATCTGGTTGTAAGGGGGAGCTACCGTAGTCTGAGTTTGGTTATATACGGAAACACGGCCGAAGATCTGGGGCAATTCAACATTGAATTTGATGATAGCTCCATAACTAATCTTGTTAGCTCAGCTGAGGGAAAGCTTGAAGACCTCCCTCTGGCTTTACATTCAACTAATCTGACAATTGAGGAATCACTATCAGCTCTGAATACTTTATCTTTACCTGTTACAGCATCAGATTTATCTATTGAAGTTAAGCAATTATTACAGCTGATGTTGAAGATTTGTGAGTTGCCCAATCTAGGGGATGCATTGCAAAAAGTAGTTAGCACTGTAGTGTCAGCTGCCACTTGTTATGTGACTTGCTCCTGGGGCAGATCTAGTGACTGTGAAGAGCTACACAAGGTTCTTATTGAGGCCAGAACAGAGCTTATTCAGCTATATAAATCCTTTAAAGAAGAATCAGGGAATGCATCAGCTGAATCATTGGAAGACTGCGATATTTTTGTCTCTGAGACTGATTTGGTAACTTCCAAACAGTTGGCTGATTGGCTAAGTCGGTACTTTTTCTTCGATAGGGACTTTTCAAGTGTTGGATATCACCAACTTCCACAGGATACAAATGTCATGCTGGGGTTGAGTGTGGCTCTTCTTTTGTGCTCTGGAAGAGAGAGCTGCTTTCACTTTGTCAGCGGTGGGGGAATGCAGCAGCTTGTACATGTCTTCAGCCGTGACAAGCAGAATTCTACCGCAACGACATTACTTCTACTTGGAGTTATTGAGAAAGCTACTCAGCATTCTTTTGGCTGTGAAGGATTTTTAGGTTGGTGGCCTCGTGAAGATGAAAATATTCTATCTGGTGTCAGTGATGGTTACAGTAGATTGTTGAATTTGTTGCTTCAAAAACAGCGTCACGATGTTGCTTCATGTGCAACTTATGTCCTTCATCGACTTAGATTTTATGAGGTCACTGCAAGATTTGAGTGTGCAGCTCTGTCTGTATTGGGAGGTCTCTCTACTATTGGTAGGGTGACGAGTGATACTTTGGAAATGCTTATCTGTGCAAAATCGCAACTCAAAAAACTCTTGAAATTGATAACTTCACGTGATCCAATTGAAGATCCTTCCCCAGTTGCCCGTGCAACCAGAAAATTGATTCTTGGTCAAACTGAAGGTTTGTTGTCATATAAAGCATCCAGTGACTTGATTGCTTCATCAAATTGTTGTTTCTCAAATCGGGATATCGACTTGCATTTGCTGGATCTTCTCAAGGAGCGGGGATTTCTTCCTCTAGCAGTTGCACTATTGTCATCATCCATATTACGTTCAGAAGCAGGACGTTCTATGGACATATATGTGGAAATTACATCATCTATTGAGGCCATTATTCTTTCCCTTCTGTTTTGTCGTTCAGGCTTAATTTTCCTACTACAGCACCCTGAACTTTCTGGAACTTTAATACATGCCTTAAGGGGTGGCGATAATGTGAACAAGGATGTGTGTCTTCCCCTTCGATATGCATCTGTTTCCATATCAAAAGGATTCTTTTGCGTTCCACAGGAAGTTGGAATGATTGTTGGGACGCATTTGAGGGTGGTTAACGCCATTGATCGTTTGCTTACTGCGGCTCCAAACACTGAAGAATTTTTATGGGTGTTGTGGGAACTATGCGCTATTGCAAGGTCTGACTGTGGACGCCAGGCACTGTTGGCTTTGGGATATTTTCCGGAGGCTGTTAAAATTTTGATTGAAGCATTACATTCTGCCAAGGAACCGGAGCCGCTTGCTAAAAATAGTGGAGCCTCACCGTTAAATCTTGCGATATTTCACTCAGCTGCCGAGATTTTTGAAGTTATTGTTTCGGATTCAACTGCCTCTTCTCTTGGATCCTGGATTGGACATGTTACGGACCTCCATAGGGCTTTACATACCTCTTCTCCAGGGTCGAATAGGAAGGATGCCCCCACAAGGATGTTGGAATGGATAGATGCTGGAGTAGTATATCATAAAAATGGAGTTACAGGTCTTATACGATATGCTGCTGTGATTGTTTCCGGAGGAGATGCGCACTTGACTTCAACCATCCCTCTTGTGTCGGATCTAACAGATGCAGAGAATGTTATTGGAGATACTTGTGGTGGTTCAGATGTTAATGTTATGGAGAATCTTGGAAAGTTCATCTCTGATAAGACTTTTGATGGTTTGACTCTTCGTGACTCTTCTGTAGCACAGTTGACAACAGCATTTCGCATTTTGGCTTTCATTTCAGAGAACTCGACTGTTGCCGCTACTCTATATGATGAAGGAGCAATAGCAATAATCTATGCAGTTTTGGTCAACTGTAGGTTTATGCTCGAAAGGTCCTCAAACAGTTATGATTACCTTGTTGACGAGGGCACAGAATGCAACTCTACATCAGATTTACTGCTGGAACGTAATCGTGAGCAGAGTTTAGTTGATCTTCTGGTTCCAACTCTTGTGTTGTTGATCAATTTATTGCAGAAATTGAAGGAGGTACAAGAGCAGCACCGGAATACCAAATTGTTGAATGCGCTTCTACGATTGCACCGAGAAGTAAGTCCGAAACTAGCCGCATGTACTGCAGACCTATCGTCTCCTTATCCTGATTCTGCCCTTGGGTTTGGAGCTATCTGCCATCTTCTTGTCTCAGCGCTTGCTTGTTGGCCAATCTTTGGCTGGACTCCTGGGCTTTTTCACTCTCTCCTTGCTAGTGTTCAAGTTACTTCCTTGCTGGCCTTGGGTCCAAAGGAAACATGCAGTTTGCTATGCCTTCTGAATGATTTATTTCCAGAAGAAGGGGTCTGGCTCTGGAAAGATGGGATGCCTTTGCTGAGTGCCCTTAGAAAGTTGTCTGTTGGGACGCTTTTGGGTCCTGAGAAGGAGAGACAGGTCAACTGGTATCTGCGTCCTGCAAATCTTGAGAAGTTGCAGAGCCAATTCACACCACATCTGGACAAAATAGCCCAGATTATACAACATTATGCTATATCTGAATTGGTTGTTATTCAAGACATGCTTCGAGTTTTTATTATTCGCGTTGCTTGCCAAAAAAGTGAAAGTTGCTCTGTTCTTCTACGGCCCATATTCTCATGGATTCGTGATCATGTTTATGAGTTGCCTTCTCCATCAGATATGGATGCTTATAAGGTTTATAGATATCTTGATTTCGTTGCGAGCTTATTAGAGCATCCACGTGCCAAGGCACTATTGTTAAAGGAGGGTGCCATTCGAATGCTAACTAGAGTGCTCGATAGGTGTTTAGCTACTGCTGATACAGATGGAACCCCGATCCTAGCTGGTAGAAGTTCAGCTAAATCCGGGTTTCCTGTGCTCAGTTGGTGCCTCCCTGTATTCAAGTCCTTCTCACTGATTTCCATTTCTCACGCAAGTCTACACAAGGATTTGCACAAGTTTGCAAACGTGAGTACTGAAGATTCTATAATGATATTAAAATATCTCCTCCGGTTTTCTCAGGTTCTTTCAGCTGGAAAAGAATTACTTGCATGCCTTACTGCTTTCAAAGAACTAGGTTCTTGTAATGAAGGCCGAAGTGCTTTAGCAGCCGCTTTTTATGGTCTTCACTATATTGCCGAGGATCGTGAAGCATATAAAGGACATGAACAGGATGGAAATGGTAACAGTTGTCTTCTTAACGAATCGGAATGGAGAAAGTGCCCTCCTTTGTTATTTTGCTGTAAATCGTTGTTAAGGTCAGCTGATTCAAAAGACGGTTTATCAAGTTATGTGATTGAAGCTGTCAATGCACTGTGCATGGGATCTTTATGGTTCTGCCTTGACGGGGAAAGATTGAAACCAGACAGGGTTATTGCGGTGAAATTCCTTTTTGGTCTACCTGATGATATAGGCTCAACAGATGGTGTTGCAGAAGAAAACTTGAACTGCATTCATGATCTAATCTCTGTGTTGACGGCAGTAGCTGATGAGTATGTTGCTAAATCTGATGTTCAGATCCCCTTGCATGAGGTTTTAGAATCCGCAAAGTTATTAATGCTGTTGTTGCAGAAGCCTAGTTCTTTGTTAAAGATGGATGATATCTTTGTTAGTGATAGTGTTCCTGTACCACCAAATGTTGCATTATCTTCAAAGATCCATCTAATCTCAGATGGTGGTGCTGAAATGACTGGTGATTATCTTTATCAAGGAGCACTTGGAGATAAGTTTCAGTGGGAGTGTCCTGAAACGTTGCCGGATAGATTGTCACAATCAAATCTTTCTGGTAAGAGGAAAATGTCGTCACTTGACGGCCCAAATAGGCGTGCTAGGGGAGAAAGTTCCGTGGCTGAGATTACAACCCAAAATGCATTTGCTAGAGGTTTGGCCTCGACTACTGCCTCCTCTGGTCCTACTCGCAGGGATACCTTTCGGCAGCGGAAACCAAATACTAGTAGACCCCCTTCCATGCATGTTGATGACTATGTTGCAAGAGAAAGAAATGATGGTGGTTCCAATGTAATAGCAGTCCAGCGGGTTGGATCGTCTGGTGGGAGACCTCCTTCAATGCATGTGGATGAATATATGGCCAGGGAAAGGGAACGCCGGAATCCGTTGTCAACGGTAGTTGGGGATGCAACAATACAGGTGAAGAGTGCAACACCCGTGAATGACTCACCTATGGAGAAGTTGAACAAGCCTAAACAATTGAAAGCTGATCTTGATGATGATCTTCAAATTGACATACAATTTGATGGTGAGGAGTGTGAACCTGATGACAAATTGCCCTTTCCTCAGCCTGATGATATTCTACAGCTGCCTGCTCCTGTGGTTGCTGAGCAAAGCTCTCCACACTCTATTGTTGAAGAGACAGAGAGCGATGTTCACTCCACACCGCTAACATCTAATATGGATGACAACACACAAAGTGAATTTTCTTCCAGGATGTCAGTTTCACGTCCTGAAATGCCTTTGACTCGAGAACCAAGTGTTTCTTCAGACAAGAAGTATTTTGAGCATTCTGATGAGTCAAAGAATCCTACATTTGTTAAGGCTTCTAGTGGTTTTGAATCTACAGCAGCAGGAAATAGTCCTAGATTCCCTGTCTTTGGCTATAATAATTCATCGGGACCTTCTGCACAGTTGCCAGTTGATTCAAGAATGAATCCACAGAATTTTTTTCCAAAGAACAGTTCACAACATGTAGGTAATGTGCCTATGGCTACAGGTTCTCCAGGATTTTATGACCCGAGGTTTCTTTCAAATCAACCTCCTTTACCTCCAATGCCGCCTCCCTCAACAGTTGCAGCTTTGATGTCTCAGACTTCTGATACAGTTCCAAGTCAATCATCCCCGTTTGTGAACTCCATGAATGAGGGACAGCAGCCCTCCACAACCTATCAGATTATCCTTCTGCATTCAATAATGGTTCTTCATCCAGAAGTTCCATCTCTTCTCCTAGTGGGGCTGCCAGGGCCCCTCCACCGCTTCCTCTTACACCACCTCCTTTTTCATCCAGTCCTTATAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1934

Amino Acids

212.28

Weight (kDa)

5.33

Isoelectric Point (pI)

48.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010141)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 3462, 5795
Acc16I TGCGCA 1 cut(s) 2364
AccB1I GGYRCC 3 cut(s) 231, 3539, 3657
AccB7I CCANNNNNTGG 1 cut(s) 2990
AccBSI CCGCTC 1 cut(s) 1573
AccI GTMKAC 4 cut(s) 69, 3709, 4168, 4726
AccII CGCG 1 cut(s) 3354
AccIII TCCGGA 2 cut(s) 2023, 2351
AclI AACGTT 1 cut(s) 4520
AcoI YGGCCR 4 cut(s) 8, 360, 2981, 4857
AcsI RAATTY 8 cut(s) 389, 1039, 1186, 1940, 2037, 4154, 5201, 5443
AcuI CTGAAG 5 cut(s) 1006, 1488, 1956, 3768, 5250
AcvI CACGTG 2 cut(s) 1403, 3512
AcyI GRCGYC 2 cut(s) 232, 1993
AdeI CACNNNGTG 1 cut(s) 5198
AfaI GTAC 7 cut(s) 204, 860, 1014, 2814, 2896, 3745, 4398
AfeI AGCGCT 1 cut(s) 2970
AflII CTTAAG 1 cut(s) 1765
AflIII ACRYGT 3 cut(s) 1015, 2197, 5470
AhdI GACNNNNNGTC 1 cut(s) 2908
AhlI ACTAGT 1 cut(s) 4721
AjiI CACGTC 1 cut(s) 5228
AjnI CCWGG 9 cut(s) 665, 1995, 2186, 2236, 3001, 4859, 5210, 5503, 5740
AjuI GAANNNNNNNTTGG 4 cut(s) 5248, 5280, 5446, 5478
AleI CACNNNNGTG 1 cut(s) 632
Alw21I GWGCWC 4 cut(s) 959, 3567, 3651, 4486
AlwNI CAGNNNCTG 2 cut(s) 2002, 4256
Ama87I CYCGRG 2 cut(s) 5247, 5518
Aor13HI TCCGGA 2 cut(s) 2023, 2351
Aor51HI AGCGCT 1 cut(s) 2970
ApaI GGGCCC 1 cut(s) 5748
ApoI RAATTY 8 cut(s) 389, 1039, 1186, 1940, 2037, 4154, 5201, 5443
ArsI GACNNNNNNTTYG 4 cut(s) 1192, 1224, 5003, 5035
AseI ATTAAT 1 cut(s) 4325
Asp700I GAANNNNTTC 1 cut(s) 1146
AspLEI GCGC 5 cut(s) 234, 1970, 2365, 2851, 2971
AsuC2I CCSGG 1 cut(s) 3637
AsuHPI GGTGA 8 cut(s) 890, 1339, 2094, 4162, 4475, 4930, 4938, 5039
AsuII TTCGAA 1 cut(s) 3547
AvaI CYCGRG 2 cut(s) 5247, 5518
AvaII GGWCC 6 cut(s) 2206, 2658, 3059, 3188, 4679, 5399
BaeGI GKGCMC 5 cut(s) 156, 2696, 3157, 3995, 5748
BaeI ACNNNNGTAYC 2 cut(s) 906, 939
BalI TGGCCA 2 cut(s) 2983, 4859
BamHI GGATCC 1 cut(s) 2183
BanI GGYRCC 3 cut(s) 231, 3539, 3657
BanII GRGCYC 1 cut(s) 5748
BarI GAAGNNNNNNTAC 4 cut(s) 851, 883, 4717, 4749
BauI CACGAG 1 cut(s) 1131
BbrPI CACGTG 2 cut(s) 1403, 3512
BbsI GAAGAC 6 cut(s) 450, 795, 1012, 1793, 3887, 3956
Bbv12I GWGCWC 4 cut(s) 959, 3567, 3651, 4486
BbvCI CCTCAGC 2 cut(s) 429, 5064
BceAI ACGGC 5 cut(s) 375, 1011, 3410, 4263, 4597
BcgI CGANNNNNNTGC 2 cut(s) 2889, 2923
BciT130I CCWGG 9 cut(s) 667, 1997, 2188, 2238, 3003, 4861, 5212, 5505, 5742
BciVI GTATCC 2 cut(s) 907, 4687
BclI TGATCA 3 cut(s) 99, 2784, 3418
BcnI CCSGG 1 cut(s) 3637
BcuI ACTAGT 1 cut(s) 4721
BfmI CTRYAG 8 cut(s) 630, 1727, 2520, 2638, 2898, 5081, 5343, 5493
BfoI RGCGCY 2 cut(s) 235, 2972
BfrI CTTAAG 1 cut(s) 1765
BfuI GTATCC 2 cut(s) 907, 4687
BglII AGATCT 2 cut(s) 367, 674
BlpI GCTNAGC 3 cut(s) 87, 424, 5106
BmcAI AGTACT 1 cut(s) 3745
Bme18I GGWCC 6 cut(s) 2206, 2658, 3059, 3188, 4679, 5399
BmeRI GACNNNNNGTC 1 cut(s) 2908
BmeT110I CYCGRG 2 cut(s) 5247, 5518
BmgBI CACGTC 1 cut(s) 5228
BmrI ACTGGG 1 cut(s) 1421
BmuI ACTGGG 1 cut(s) 1421
BoxI GACNNNNGTC 1 cut(s) 41
BpiI GAAGAC 6 cut(s) 450, 795, 1012, 1793, 3887, 3956
BplI GAGNNNNNCTC 4 cut(s) 928, 960, 5099, 5131
BpmI CTGGAG 3 cut(s) 2220, 2310, 5487
Bpu10I CCTNAGC 2 cut(s) 429, 5064
Bpu1102I GCTNAGC 3 cut(s) 87, 424, 5106
Bpu14I TTCGAA 1 cut(s) 3547
BpuEI CTTGAG 2 cut(s) 1550, 3257
BpuMI CCSGG 1 cut(s) 3637
BsaAI YACGTR 2 cut(s) 1403, 3512
BsaBI GATNNNNATC 3 cut(s) 98, 1816, 4998
BsaHI GRCGYC 2 cut(s) 232, 1993
BsaI GGTCTC 2 cut(s) 1313, 4819
BsaWI WCCGGW 5 cut(s) 2023, 2071, 2351, 2826, 3780
Bse1I ACTGG 6 cut(s) 1427, 1494, 3218, 4465, 5417, 5786
Bse3DI GCAATG 1 cut(s) 608
Bse8I GATNNNNATC 3 cut(s) 98, 1816, 4998
BseAI TCCGGA 2 cut(s) 2023, 2351
BseBI CCWGG 9 cut(s) 667, 1997, 2188, 2238, 3003, 4861, 5212, 5505, 5742
BseJI GATNNNNATC 3 cut(s) 98, 1816, 4998
BseMI GCAATG 1 cut(s) 608
BseNI ACTGG 6 cut(s) 1427, 1494, 3218, 4465, 5417, 5786
BseRI GAGGAG 4 cut(s) 2370, 3767, 4663, 5045
BseSI GKGCMC 5 cut(s) 156, 2696, 3157, 3995, 5748
BseX3I CGGCCG 2 cut(s) 8, 360
BseYI CCCAGC 1 cut(s) 928
BsgI GTGCAG 2 cut(s) 1305, 5391
Bsh1236I CGCG 1 cut(s) 3354
Bsh1285I CGRYCG 2 cut(s) 11, 363
BshNI GGYRCC 3 cut(s) 231, 3539, 3657
BsiEI CGRYCG 2 cut(s) 11, 363
BsiHKAI GWGCWC 4 cut(s) 959, 3567, 3651, 4486
BsiHKCI CYCGRG 2 cut(s) 5247, 5518
BsiSI CCGG 9 cut(s) 11, 2024, 2072, 2352, 2827, 3636, 3781, 4526, 4876
BslFI GGGAC 5 cut(s) 890, 1891, 3190, 5412, 5661
BsmBI CGTCTC 1 cut(s) 2916
BsmFI GGGAC 5 cut(s) 890, 1891, 3190, 5412, 5661
BsmI GAATGC 9 cut(s) 772, 1005, 1093, 2705, 2851, 3555, 4221, 5287, 5686
Bso31I GGTCTC 2 cut(s) 1313, 4819
BsoBI CYCGRG 2 cut(s) 5247, 5518
Bsp119I TTCGAA 1 cut(s) 3547
Bsp120I GGGCCC 1 cut(s) 5744
Bsp1286I GDGCHC 9 cut(s) 156, 959, 2696, 3157, 3567, 3651, 3995, 4486, 5748
Bsp13I TCCGGA 2 cut(s) 2023, 2351
Bsp1407I TGTACA 2 cut(s) 202, 1012
Bsp1720I GCTNAGC 3 cut(s) 87, 424, 5106
BspEI TCCGGA 2 cut(s) 2023, 2351
BspFNI CGCG 1 cut(s) 3354
BspHI TCATGA 1 cut(s) 4225
BspMAI CTGCAG 1 cut(s) 2902
BspQI GCTCTTC 2 cut(s) 684, 951
BspT104I TTCGAA 1 cut(s) 3547
BspT107I GGYRCC 3 cut(s) 231, 3539, 3657
BspTI CTTAAG 1 cut(s) 1765
BspTNI GGTCTC 2 cut(s) 1313, 4819
BsrBI CCGCTC 1 cut(s) 1573
BsrDI GCAATG 1 cut(s) 608
BsrGI TGTACA 2 cut(s) 202, 1012
BsrI ACTGG 6 cut(s) 1427, 1494, 3218, 4465, 5417, 5786
BssNI GRCGYC 2 cut(s) 232, 1993
BssSI CACGAG 1 cut(s) 1131
BssT1I CCWWGG 4 cut(s) 2064, 2932, 3054, 3516
Bst2BI CACGAG 1 cut(s) 1131
Bst2UI CCWGG 9 cut(s) 667, 1997, 2188, 2238, 3003, 4861, 5212, 5505, 5742
BstACI GRCGYC 2 cut(s) 232, 1993
BstAFI CTTAAG 1 cut(s) 1765
BstAPI GCANNNNNTGC 2 cut(s) 2700, 2897
BstAUI TGTACA 2 cut(s) 202, 1012
BstBAI YACGTR 2 cut(s) 1403, 3512
BstBI TTCGAA 1 cut(s) 3547
BstC8I GCNNGC 9 cut(s) 109, 2082, 2973, 3051, 3361, 3493, 3823, 4596, 5091
BstDSI CCRYGG 1 cut(s) 4614
BstFNI CGCG 1 cut(s) 3354
BstH2I RGCGCY 2 cut(s) 235, 2972
BstHHI GCGC 5 cut(s) 234, 1970, 2365, 2851, 2971
BstMCI CGRYCG 2 cut(s) 11, 363
BstNI CCWGG 9 cut(s) 667, 1997, 2188, 2238, 3003, 4861, 5212, 5505, 5742
BstPAI GACNNNNGTC 1 cut(s) 41
BstSFI CTRYAG 8 cut(s) 630, 1727, 2520, 2638, 2898, 5081, 5343, 5493
BstSLI GKGCMC 5 cut(s) 156, 2696, 3157, 3995, 5748
BstUI CGCG 1 cut(s) 3354
BstV2I GAAGAC 6 cut(s) 450, 795, 1012, 1793, 3887, 3956
BstX2I RGATCY 9 cut(s) 367, 674, 1417, 1558, 2183, 2395, 4094, 4287, 4425
BstXI CCANNNNNNTGG 2 cut(s) 838, 4808
BstYI RGATCY 9 cut(s) 367, 674, 1417, 1558, 2183, 2395, 4094, 4287, 4425
BstZI CGGCCG 2 cut(s) 8, 360
BsuI GTATCC 2 cut(s) 907, 4687
BtgI CCRYGG 1 cut(s) 4614
BtgZI GCGATG 1 cut(s) 5163
BtrI CACGTC 1 cut(s) 5228
BtsI GCAGTG 3 cut(s) 102, 156, 1266
Cac8I GCNNGC 9 cut(s) 109, 2082, 2973, 3051, 3361, 3493, 3823, 4596, 5091
CaiI CAGNNNCTG 2 cut(s) 2002, 4256
CciI TCATGA 1 cut(s) 4225
CfoI GCGC 5 cut(s) 234, 1970, 2365, 2851, 2971
CseI GACGC 6 cut(s) 10, 1196, 1888, 2001, 3187, 3212
Csp6I GTAC 7 cut(s) 203, 859, 1013, 2813, 2895, 3744, 4397
CspCI CAANNNNNGTGG 2 cut(s) 4824, 4859
CviQI GTAC 7 cut(s) 203, 859, 1013, 2813, 2895, 3744, 4397
DinI GGCGCC 1 cut(s) 233
DraI TTTAAA 1 cut(s) 751
DraIII CACNNNGTG 1 cut(s) 5198
DriI GACNNNNNGTC 1 cut(s) 2908
EaeI YGGCCR 4 cut(s) 8, 360, 2981, 4857
EagI CGGCCG 2 cut(s) 8, 360
Eam1105I GACNNNNNGTC 1 cut(s) 2908
EclXI CGGCCG 2 cut(s) 8, 360
Eco130I CCWWGG 4 cut(s) 2064, 2932, 3054, 3516
Eco24I GRGCYC 1 cut(s) 5748
Eco31I GGTCTC 2 cut(s) 1313, 4819
Eco32I GATATC 4 cut(s) 896, 1540, 3476, 4372
Eco47I GGWCC 6 cut(s) 2206, 2658, 3059, 3188, 4679, 5399
Eco47III AGCGCT 1 cut(s) 2970
Eco52I CGGCCG 2 cut(s) 8, 360
Eco57I CTGAAG 5 cut(s) 1006, 1488, 1956, 3768, 5250
Eco72I CACGTG 2 cut(s) 1403, 3512
Eco88I CYCGRG 2 cut(s) 5247, 5518
EcoO109I RGGNCCY 5 cut(s) 2658, 3188, 5399, 5744, 5745
EcoRI GAATTC 1 cut(s) 1039
EcoRII CCWGG 9 cut(s) 665, 1995, 2186, 2236, 3001, 4859, 5210, 5503, 5740
EcoRV GATATC 4 cut(s) 896, 1540, 3476, 4372
EcoT14I CCWWGG 4 cut(s) 2064, 2932, 3054, 3516
EcoT22I ATGCAT 6 cut(s) 610, 772, 1819, 4642, 4743, 4842
EcoT38I GRGCYC 1 cut(s) 5748
EgeI GGCGCC 1 cut(s) 233
EheI GGCGCC 1 cut(s) 233
ErhI CCWWGG 4 cut(s) 2064, 2932, 3054, 3516
Esp3I CGTCTC 1 cut(s) 2916
FaqI GGGAC 5 cut(s) 890, 1891, 3190, 5412, 5661
FauI CCCGC 2 cut(s) 1566, 4797
FbaI TGATCA 3 cut(s) 99, 2784, 3418
FblI GTMKAC 4 cut(s) 69, 3709, 4168, 4726
FriOI GRGCYC 1 cut(s) 5748
FspAI RTGCGCAY 1 cut(s) 2364
FspI TGCGCA 1 cut(s) 2364
GlaI GCGC 5 cut(s) 233, 1969, 2364, 2850, 2970
GsaI CCCAGC 1 cut(s) 932
GsuI CTGGAG 3 cut(s) 2220, 2310, 5487
HaeII RGCGCY 2 cut(s) 235, 2972
HapII CCGG 9 cut(s) 11, 2024, 2072, 2352, 2827, 3636, 3781, 4526, 4876
HgaI GACGC 6 cut(s) 10, 1196, 1888, 2001, 3187, 3212
HhaI GCGC 5 cut(s) 234, 1970, 2365, 2851, 2971
Hin1I GRCGYC 2 cut(s) 232, 1993
Hin6I GCGC 5 cut(s) 232, 1968, 2363, 2849, 2969
HinP1I GCGC 5 cut(s) 232, 1968, 2363, 2849, 2969
HincII GTYRAC 8 cut(s) 70, 1897, 2532, 2635, 2686, 3211, 4245, 4890
HindII GTYRAC 8 cut(s) 70, 1897, 2532, 2635, 2686, 3211, 4245, 4890
HindIII AAGCTT 1 cut(s) 437
HpaI GTTAAC 1 cut(s) 1897
HpaII CCGG 9 cut(s) 11, 2024, 2072, 2352, 2827, 3636, 3781, 4526, 4876
HphI GGTGA 8 cut(s) 890, 1339, 2094, 4162, 4475, 4930, 4938, 5039
Hpy99I CGWCG 3 cut(s) 71, 74, 139
HpyCH4IV ACGT 9 cut(s) 66, 1402, 1621, 1636, 2731, 3511, 3738, 4520, 5227
HpySE526I ACGT 9 cut(s) 66, 1402, 1621, 1636, 2731, 3511, 3738, 4520, 5227
Hsp92I GRCGYC 2 cut(s) 232, 1993
HspAI GCGC 5 cut(s) 232, 1968, 2363, 2849, 2969
KasI GGCGCC 1 cut(s) 231
Kpn2I TCCGGA 2 cut(s) 2023, 2351
Ksp22I TGATCA 3 cut(s) 99, 2784, 3418
KspAI GTTAAC 1 cut(s) 1897
LguI GCTCTTC 2 cut(s) 684, 951
MaeII ACGT 9 cut(s) 66, 1402, 1621, 1636, 2731, 3511, 3738, 4520, 5227
MbiI CCGCTC 1 cut(s) 1573
MfeI CAATTG 3 cut(s) 480, 1410, 4976
MflI RGATCY 9 cut(s) 367, 674, 1417, 1558, 2183, 2395, 4094, 4287, 4425
MhlI GDGCHC 9 cut(s) 156, 959, 2696, 3157, 3567, 3651, 3995, 4486, 5748
MlsI TGGCCA 2 cut(s) 2983, 4859
MluNI TGGCCA 2 cut(s) 2983, 4859
Mly113I GGCGCC 1 cut(s) 232
MlyI GAGTC 6 cut(s) 2497, 2507, 2992, 4937, 5239, 5306
MmeI TCCRAC 6 cut(s) 871, 1843, 2253, 2373, 2792, 4789
Mox20I TGGCCA 2 cut(s) 2983, 4859
Mph1103I ATGCAT 6 cut(s) 610, 772, 1819, 4642, 4743, 4842
MroI TCCGGA 2 cut(s) 2023, 2351
MroXI GAANNNNTTC 1 cut(s) 1146
MscI TGGCCA 2 cut(s) 2983, 4859
Msp20I TGGCCA 2 cut(s) 2983, 4859
MspCI CTTAAG 1 cut(s) 1765
MspI CCGG 9 cut(s) 11, 2024, 2072, 2352, 2827, 3636, 3781, 4526, 4876
MunI CAATTG 3 cut(s) 480, 1410, 4976
Mva1269I GAATGC 9 cut(s) 772, 1005, 1093, 2705, 2851, 3555, 4221, 5287, 5686
MvaI CCWGG 9 cut(s) 667, 1997, 2188, 2238, 3003, 4861, 5212, 5505, 5742
MvnI CGCG 1 cut(s) 3354
NarI GGCGCC 1 cut(s) 232
NciI CCSGG 1 cut(s) 3637
NmeAIII GCCGAG 2 cut(s) 2161, 3934
NsbI TGCGCA 1 cut(s) 2364
NsiI ATGCAT 6 cut(s) 610, 772, 1819, 4642, 4743, 4842
NspV TTCGAA 1 cut(s) 3547
OliI CACNNNNGTG 1 cut(s) 632
PaeI GCATGC 1 cut(s) 3825
PaeR7I CTCGAG 1 cut(s) 5247
PagI TCATGA 1 cut(s) 4225
PciI ACATGT 3 cut(s) 1015, 2197, 5470
PciSI GCTCTTC 2 cut(s) 684, 951
PcsI WCGNNNNNNNCGW 2 cut(s) 63, 2863
PctI GAATGC 9 cut(s) 772, 1005, 1093, 2705, 2851, 3555, 4221, 5287, 5686
PdmI GAANNNNTTC 1 cut(s) 1146
PflMI CCANNNNNTGG 1 cut(s) 2990
PfoI TCCNGGA 3 cut(s) 2186, 5210, 5503
PleI GAGTC 6 cut(s) 2497, 2507, 2992, 4937, 5239, 5305
PluTI GGCGCC 1 cut(s) 235
PmaCI CACGTG 2 cut(s) 1403, 3512
PmlI CACGTG 2 cut(s) 1403, 3512
PpsI GAGTC 6 cut(s) 2497, 2507, 2992, 4937, 5239, 5305
Ppu21I YACGTR 2 cut(s) 1403, 3512
PpuMI RGGWCCY 3 cut(s) 2658, 3188, 5399
PscI ACATGT 3 cut(s) 1015, 2197, 5470
PshAI GACNNNNGTC 1 cut(s) 41
PshBI ATTAAT 1 cut(s) 4325
PsiI TTATAA 2 cut(s) 3462, 5795
Psp1406I AACGTT 1 cut(s) 4520
Psp5II RGGWCCY 3 cut(s) 2658, 3188, 5399
Psp6I CCWGG 9 cut(s) 665, 1995, 2186, 2236, 3001, 4859, 5210, 5503, 5740
PspCI CACGTG 2 cut(s) 1403, 3512
PspFI CCCAGC 1 cut(s) 928
PspGI CCWGG 9 cut(s) 665, 1995, 2186, 2236, 3001, 4859, 5210, 5503, 5740
PspOMI GGGCCC 1 cut(s) 5744
PspPPI RGGWCCY 3 cut(s) 2658, 3188, 5399
PstI CTGCAG 1 cut(s) 2902
PstNI CAGNNNCTG 2 cut(s) 2002, 4256
PsuI RGATCY 9 cut(s) 367, 674, 1417, 1558, 2183, 2395, 4094, 4287, 4425
PvuII CAGCTG 8 cut(s) 428, 568, 641, 776, 2132, 3803, 4034, 5086
RsaI GTAC 7 cut(s) 204, 860, 1014, 2814, 2896, 3745, 4398
RsaNI GTAC 7 cut(s) 203, 859, 1013, 2813, 2895, 3744, 4397
SalI GTCGAC 1 cut(s) 68
SapI GCTCTTC 2 cut(s) 684, 951
ScaI AGTACT 1 cut(s) 3745
SchI GAGTC 6 cut(s) 2497, 2507, 2992, 4937, 5239, 5306
SduI GDGCHC 9 cut(s) 156, 959, 2696, 3157, 3567, 3651, 3995, 4486, 5748
SfcI CTRYAG 8 cut(s) 630, 1727, 2520, 2638, 2898, 5081, 5343, 5493
SfoI GGCGCC 1 cut(s) 233
Sfr274I CTCGAG 1 cut(s) 5247
SfuI TTCGAA 1 cut(s) 3547
SgrDI CGTCGACG 1 cut(s) 68
SinI GGWCC 6 cut(s) 2206, 2658, 3059, 3188, 4679, 5399
SlaI CTCGAG 1 cut(s) 5247
SmlI CTYRAG 4 cut(s) 1565, 1765, 3236, 5247
SmoI CTYRAG 4 cut(s) 1565, 1765, 3236, 5247
SpeI ACTAGT 1 cut(s) 4721
SphI GCATGC 1 cut(s) 3825
SspDI GGCGCC 1 cut(s) 231
SspI AATATT 1 cut(s) 1147
StyI CCWWGG 4 cut(s) 2064, 2932, 3054, 3516
TaiI ACGT 9 cut(s) 69, 1405, 1624, 1639, 2734, 3514, 3741, 4523, 5230
TatI WGTACW 4 cut(s) 202, 1012, 2894, 3743
TauI GCSGC 6 cut(s) 1925, 2080, 2585, 2891, 3884, 5560
TspGWI ACGGA 4 cut(s) 366, 2219, 4603, 4872
Van91I CCANNNNNTGG 1 cut(s) 2990
Vha464I CTTAAG 1 cut(s) 1765
VpaK11BI GGWCC 6 cut(s) 2206, 2658, 3059, 3188, 4679, 5399
VspI ATTAAT 1 cut(s) 4325
XapI RAATTY 8 cut(s) 389, 1039, 1186, 1940, 2037, 4154, 5201, 5443
XcmI CCANNNNNNNNNTGG 2 cut(s) 2269, 2991
XhoI CTCGAG 1 cut(s) 5247
XmiI GTMKAC 4 cut(s) 69, 3709, 4168, 4726
XmnI GAANNNNTTC 1 cut(s) 1146
ZrmI AGTACT 1 cut(s) 3745
Zsp2I ATGCAT 6 cut(s) 610, 772, 1819, 4642, 4743, 4842
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.