RLG00000023788

Protein virilizer homolog

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
28178817 .. 28197152
18336 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023788

Sequence Viewer

Length: 6519 bp
ATGGGTCGGCCGGAGCCCTGCGTCTTGTTCGCCCACACCTTCGACCACCCCCATCTCGATGAATACGTCGACGAGGTATTGTTTGCTGAGCCGATTGTGATCACTGCTTGCGAGTTTCTTGAACACAACACCTCGTCGGCTTCACAAGCAGTGCCACTTCAGGGGGCTACTTTACCTCCTTCATTTGCTTTGGAGGTATTTGTACAATGTGAGGCAGAGACAAGGTTCAGGCGCCTCTGTCAGCCTTTCCTGTATTCTCCTTCATCATCAAATGTGCTCGAAGTCGAGGCTGTTGTAACTAATCATCTGGTTGTAAGGGGGAGCTACCGTAGTCTGAGTTTGGTTATATACGGAAACACGGCAGAAGATCTGGGGCAATTCAACATTGAATTTGATGATAGCTCCATAACTAATCTTGTTAGCTCTGCTGAGGGGAAGCTTGAAGACCTCCCTCGGGCTTTACATTCAACTAATCTGACAATTGAGGAATCACTATCAGCTCTGAATACTTTATCTTTACCTGTTACAGCATCAGATTTATCCATTGAAATTAAGCAATTATTACAGTTAATGTTGAAGGTTTGTAAGTTACCCAATCTAGGGGATGCATTGCATAAAATAGTTAGCACTGTAGTGTCAGCTGCCACTTGTTATGTGACTTGCTCCTGGGGCAGATCTAGTGACTGTGAAGAGCCACACGATGTTCTTAGTGAGGCCAGAACAGAGCTTATTCAACTCTATAAATCCTTTAAAGAGGAATCAGGGAATGCATCAGATGAATCATTGGAAGACTGTGATTTTTGTGACTCTGAGGCTGATTTAGTACCTTCCAAACAGTTGGTGGATTGGTTAAGTCAGTACTTTTGCTTTAATAGGGACTTTTCAAGTGTTGGACATCACCAACTTCCACAGGATACAAATGTCATGCTGGGATTGAGTGTGGCTCTTCTTTTGTGCTCTGGAAGAGAGAGTTGCTTTCACTTTGTAAGCGGTGGGGGAATGGAGCAGCTTGTACATGTCTTCAGTCGTGACAAGCAGAATACTACCGCAACAACATTACTTCTACTTGGAGTTGTTGAGAAGGCTACTCAGCATTCTTTTGGATGTGAAGGATTTTTAGGTTGGTGGCCTCGTGAAGATGAAAATATTCTATCTGGTGTCAGTGATGGTTACAGTAGATTGTTGAATTTGTTGTTGCAAAAACAGCGTCATGACGTTGCTTCATGTGCAACTTATGTCCTTCATCGCTTAAGATTTTATGAGGTTACTTCAAGATTTGAGTGTGCAGCTTTGTCTATATTGGGAGGTCTCTCTACTGTTGGTAGGGTCACAAGTGATACTTTGGACATGCTTATCTGTGCAAAATCGCAACTTAAAAAGCTCATGAAATTGATAACTTCACGCGGTCCAATTGAAGATCCATCCCCTGTTGCTCGTGCAACCAGAAAATTGATTCTTGGTCAAACTGAAGGTTTGTTGTCATATAAAGCATCCAGTAACTTGATTGCTTCATCAAATTGTTGTTTCTCAAATCGGGATATCGACTTGCATTTGCTGGATCTTCTCAAGGAGCGGGGATTTCTTCCTCTAGCAGTTGCACTATTGTCGTCATCCATATTACGTTCAGAAGTAGGACGTGCTATGGACTTATTTGTGGAAATTACATCATCTATTGAGGCCATTATTCTTTCCCTTCTGTTTTGTCGCTCAGGCCTAATTTTCCTGCTACAGCACCCTGAACTTTCCGCAACTATAATACATGCCCTAAGGGGTGGTGATAATGTGAACAAGGATGTGTGTCTTCCTCTTCGGTATGCATCTGTTTCCATATCCAAGGGATTCTTTTGCATTCCACAGGAGGTTGGAATGATTGTTGGGATGCATTTGAGGGTGGTTAATGCCATAGATCGTTTGCTTACTGCAGCTCCAAACACTGAAGAATTTTTATGGGTGTTGTGGGAACTATGTGCTCTTGCAAGGTCTGACTGTGGACGCCAGGCACTGTTGGCTTTGGGATATTTTCCAGAGGCTGTTAAAATTTTGATTGAAGCATTACATTCTGCCAAGGAACCGGAGCCGCTTGCTAAAAATAGTGGAGCCTCACCGTTAAATCTTGCGATATTTCACTCAGCTGCCGAGATCTTTGAAGTTATTGTTTCTGATTCAACTGCATCTTCTCTTGGATCCTGGATAGGACATGTTACGGAGCTCCATAGGGCTTTACATTCCTCTTCTCCAGGGTCAAATAGGAAAGATGCCCCCACACGGATGTTGGAATGGATAGATGCTGGAGTAGTATATCATAAAAATGGAGTTACAGGTCTTATACGATATGCTGCTGTGATCGCTTCTGGAGGAGATGCCCACTTGACTTCAACCATCCCTCTAGTGTCAGATCTAACAGATGCAGAAAATGTTATTGGAGATCCTTGTGGTGGTTCAGATGTTAATGTTATGGAGAATCTTGGAAAATTCATCTCTGACAAGACTTTTGATGGTGTGACTCTTCGTGACTCTTCTGTAGCACAGTTGACAACAGCATTTCGCATTTTGGCTTTCATTTCGGAGAATTCGACTGTTGCTGCTACTCTATATGATGAGGGAGCAATAGCTATAATCTATGCAGTTTTGGTCAACTGTAGGTTTATGCTTGAGAGGTCCTCGAACAGTTATGATTACCTTGTTGATGAGGGCACAGAATGCAACTCTACATCAGATTTACTGCTGGAACGTAATCGTGAGCAGAGTTTAGTTGATCTTGTGGTTCCAACTCTTGTGTTGTTGATCAATTTATTGCAGAAATTGAAGGAGGTACAAGAGCAGCACAGGAATACCAAATTGTTGAATGCGCTTCTACGATTGCACCGAGAAGTAAGTCCAAAACTAGCCGCATGTGCTGCAGACTTATCTTCTCCTTATCCTGATTCTGCCCTTGGGTTTGGAGCTATCTGCCATCTTCTTGTTTCAGCACTTGCTTGTTGGCCAGTCTATGGCTGGACTCCTGGGCTTTTCCACTCTCTCCTTGCTAGTGTTCAAGTTACTTCCTTGCTGGCCTTGGGTCCAAAGGAAACATGCAGTTTGCTATGCCTTCTGAATGATTTATTTCCAGAAGAAGGGGTCTGGCTTTGGAAAGATGGGATGCCCTTGCTGAGTGCCCTTAGAAAATTGTCTGTTGGGACACTTTTGGGTCCTGAGAAGGAGAGACAGGTCAACTGGTATCTGAATCCTGCACATCTTGAGAAGTTGCTGAGCCAATTGAAGCAGCATCTGGACAAAGTAGCGCAGATTATCCAACATTATGCTATATCTGAACTGGTTGTCATTCAAGACATGCTTCGAGTTTTTATTATTCGCGTTGCTTGCCAAAAAAGTGAAAGTTGTTCTGTACTTCTACAACCTATATTCTCATGGATTTGTGATCATGCTTATGAGTTGTCTTCTCCATCAGATATGGATGCTTATAAGGTTTATAGATATCTTGATTTCCTTGCCAGCTTATTGGAGCATCCACGTGCCAAGGCACTATTGTTGAAGGAGGGTGCCATTCGAATGCTAACTAGAGTGCTCGATAGTTGTTTAGGTGCCGCTGATACAGATGAAATACAGATCCTAGCTGGTAGAAGTTCAGCTAAATCTGGATTTTCTTTGCTTAGTTGGTGCCTCCCTGTATTCAAGTCCTTCTCACTGATGTTTATTTCTCAACCAAGTCTAAGGAATGATTTGCACAAGTTTGCAAACGTGGGTACTGAAGAATCTATCATGATTTTAAAATATCTCCTCAGGTTTTGTCAGGTTCTTTCAGCCGGAAAAGAATTACTTGCATGCCTTACTGCTTTCAAAGAACTAGGTTCTTGTAATGAGGGTCAAAGTGCTTTAGCAGCTGCTTTTTATGGTCTTCACTATATTGCGGAGGATCATGAAGCATATAAAGGACATGAAAAGGATGGAAATTGCAATAGTTGTCTTCCTAATGAATCTGAATGGAGAAAGTGCCCCCCGTTGTTATGTTGCTGTAAAAACTTGTTAAGATCAGCTGATTCTAACAATGGTTTATCAAGTTATGCAATTGAGGCTGTCAATGCACTGTGCATGGGATCTTTTTGGTTCTGCCTTGATGGGGAAAGATTGAATCCAGACAGGGTCATTGCGGTGAAATTCCTTTTTGGCCTTCCTGATGATATAGGCTCAACAAATGGTGTTGCAGAAGAAAACTTGAACTACATTCATGAACTAATCTGTGTGTTGAAGACAATAGCTGATGACCATGTTGCCGATTCTGATATTCAGATCCCCTTGTATCAGGTTTTAGAATCCGCAAAGTCATTAATGCTGTTGTTGCAGAAGCCAAGTTCTTTGTTGAAGATGGATGATATCTTTTCTAATGATAGTGTTCCTGTACCACCAAATGTTTTAGTATCTTCAAAGATCCATCTAATCTCAGATGGTGGTGCTGAAATGACTGGTGATTATCTTTATCAAGGAGCACTTGGAGATCAGTTTCAGTGGGAGTGTCCTGAAACATTGCCAGATAGATTGTCACAATCAAATCTTTCTGGTAAGAGGAAAATGTCCTCACTTGATGGCCCAAATAGGCGTGCCAGGGGAGAAAATTCTGTGGCTGAGATTACAACTCAAAATGCATTTGTGCGAGGTTTGGGCTCTACTACTGCCTCTGGTCCTACTCGCAGGGATACCTTTCGGCAGCGAAAACCAAATACTAGTAGGCCTCCTTCCATGCATGTTGACGACTACGTTGCAAGAGAAAGAAATGATGGTGTTTCTAATTCCAATGTAATAGCAGTCCAGCGAGTTGGATCGTCTGGCGGGAGACCTCCTTCAATTCACGTGGATGAATTTATGGCCAGGCAAAGGGAACGCCAGAATCCATTGTCAACGGTAGTTGGGGATGCAATGATACAGATGAAGAGTGCAACACCTGTAAATGACTCAGCTATGGAGAAGTTCAACAAACCTAAACAATTGAAAGCAGATCCTGATGATGATCTTCAGGGAATTGACATAGTATTTGATGGTGAGGAGTCTGAACCTGATGACAAATTGCCCTTTCCTCAGCCAGATGATAATCTGCAGCAGCCTGCTCCTGTGGTTGTTGAGCAAAGCTCTCCACACTCGATTGTTGAAGAGACAGAGAGTGATATTCATTTGACACCATTAACATCTAATATGGATGAGAACACACAAAGTGAATTTTCTTCCAGGATGTCAGGTTCACGTCCTGAAATGCCTTTGACTCGAGAACCTAGTGTTTCTTCAGACAAGAAGTATTTTGAGCATTCTGATGAGTCGAAGAATCCTACACTAGTAAAGGCTTCTAGTGGGTTTGAATCTGCAGCAGCAGCAAATAGTCCTAGATACCCTGTGTTTGGCTATAACAATTCATCGGGATCATCTGCACAGTTGCCAGTTGATTCAAGAATGAATCCACAGAATTTCTTTCCAAAGAACAGTTCACAACATGTTGGTAATGTGCCTATAGCTACAGGTTCTCCAGGATTTTATGACCCGAGATTTCTTCCAAATCAACCTCCTTTACCTCCAATGCCGCCTCCCTCAACAGTGGCAGCTTTGATATCTCAGACTTCTGATTCAGTTCCAAGTCAATCATCTCCATTTGTGAACTCTATGAATGAGGGACAGCAGCCCTCCACAGCGTACCAGATTCGTTCAGATTATCCTTCTGCATTCAATAATGGTTCTACATCCAGAAGTTCCATCTCTTCTCCTAGTGGGGGTGCCAGGCCCCCTCCACCGCTCCCTCCTACACCACCTCCTTTTTCATCTAGTCCATATAATATGACACCCAACAGAACTTCTATTGCCCAGTCTACAGTATATAACCAGACAAGTGTTGGAACAACTGAACTTCCTCAGGGCTCTACTGCACCTTCTGGGGTGAGAGTAAATGCCTATTCACCACCTGCCCTGGTGCCTCATATGGTTTTCAGTAGGCCAGGTTCTAATTCTATGACTATCTATGGACACGTCCCAACTCAGCTGCAAGGTGACAACCCTAATATGGTGCAGAATCTCTCTGTCCCCCAGTCTTCGATGCAGTCTATTCATACTGGTGGTCAATTGCAGCCACTGCAGCCCCCACAGCTTCCGCGTCCTCCACAACCACCCCAACATCTTAGGCCACCTATACAAGCTTCACAACATTTGGAACAGGGTTCCTTGCAGAGCCCAGTTCCAATGCATTCACTGCAAATGCTGCAACAGCCAATGGTTTCACCTATGCAGGCCTATTATCAATCCCAGCAACAAGAGTTTGCTCATATGCAGCAGCAAGTTGACCATTCTCAACCACAAGTTTTGCCTCAATTAGGGGATGCTACATCCCAACAGCAACAAGATCCAGGAATGTCATTACAGGAATATTTCAAGTCTCCAGAAGCTATTCAGTCTCTATTGGGTGACCGAGAAAAACTTTGTCAAGTTTTGGAGCAGCATCCAAAGTTAATGCAGATGCTTCAGGAGAAGTTGGGCGCTCAGCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

2173

Amino Acids

238.15

Weight (kDa)

5.3

Isoelectric Point (pI)

53.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010141)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3462
AarI CACCTGC 1 cut(s) 5947
Acc36I ACCTGC 1 cut(s) 5947
AccB1I GGYRCC 6 cut(s) 231, 3539, 3581, 3657, 5753, 5947
AccB7I CCANNNNNTGG 1 cut(s) 2990
AccBSI CCGCTC 2 cut(s) 1573, 5773
AccI GTMKAC 2 cut(s) 69, 5846
AccII CGCG 3 cut(s) 1404, 3354, 6127
AcoI YGGCCR 3 cut(s) 8, 2981, 4860
AcuI CTGAAG 8 cut(s) 143, 1006, 1488, 1956, 3768, 4991, 5256, 6476
AcvI CACGTG 2 cut(s) 3512, 4846
AcyI GRCGYC 2 cut(s) 232, 1993
AdeI CACNNNGTG 1 cut(s) 5204
AfaI GTAC 9 cut(s) 204, 825, 860, 1014, 2814, 3387, 3745, 4398, 5675
AflII CTTAAG 1 cut(s) 1249
AflIII ACRYGT 4 cut(s) 1015, 2197, 5476, 6001
AhlI ACTAGT 2 cut(s) 4718, 5320
AjiI CACGTC 3 cut(s) 1637, 5234, 6004
AjuI GAANNNNNNNTTGG 4 cut(s) 2403, 2435, 5452, 5484
AleI CACNNNNGTG 1 cut(s) 632
AloI GAACNNNNNNTCC 2 cut(s) 5212, 5244
Alw21I GWGCWC 6 cut(s) 279, 959, 1972, 2211, 3567, 4486
Alw26I GTCTC 7 cut(s) 212, 1313, 3196, 4822, 5138, 6411, 6429
AlwNI CAGNNNCTG 5 cut(s) 2002, 2030, 3268, 4994, 6106
Ama87I CYCGRG 3 cut(s) 453, 5253, 5524
ArsI GACNNNNNNTTYG 6 cut(s) 1192, 1224, 2474, 2506, 5009, 5041
AseI ATTAAT 1 cut(s) 4325
Asp700I GAANNNNTTC 2 cut(s) 1146, 6417
AspLEI GCGC 4 cut(s) 234, 2851, 3283, 6509
AspS9I GGNCC 7 cut(s) 1406, 2658, 3059, 3188, 4583, 4676, 5760
AsuII TTCGAA 1 cut(s) 3547
AvaI CYCGRG 3 cut(s) 453, 5253, 5524
AvaII GGWCC 5 cut(s) 1406, 2658, 3059, 3188, 4676
AxyI CCTNAGG 3 cut(s) 1766, 3779, 5889
BaeGI GKGCMC 3 cut(s) 2696, 3157, 3995
BaeI ACNNNNGTAYC 2 cut(s) 906, 939
BalI TGGCCA 2 cut(s) 2983, 4862
BamHI GGATCC 1 cut(s) 2183
BanI GGYRCC 6 cut(s) 231, 3539, 3581, 3657, 5753, 5947
BanII GRGCYC 5 cut(s) 18, 2211, 4661, 5897, 6206
BarI GAAGNNNNNNTAC 2 cut(s) 4714, 4746
BauI CACGAG 2 cut(s) 1131, 1434
BbrPI CACGTG 2 cut(s) 3512, 4846
BbsI GAAGAC 9 cut(s) 450, 795, 1012, 1793, 3429, 3887, 3956, 4253, 6057
Bbv12I GWGCWC 6 cut(s) 279, 959, 1972, 2211, 3567, 4486
BbvCI CCTCAGC 2 cut(s) 429, 5070
BceAI ACGGC 1 cut(s) 375
BcgI CGANNNNNNTGC 4 cut(s) 1587, 1621, 4736, 4770
BciVI GTATCC 2 cut(s) 907, 4684
BclI TGATCA 3 cut(s) 99, 2784, 3418
BcoDI GTCTC 7 cut(s) 212, 1313, 3196, 4822, 5138, 6411, 6429
BcuI ACTAGT 2 cut(s) 4718, 5320
BfoI RGCGCY 2 cut(s) 235, 6510
BfrI CTTAAG 1 cut(s) 1249
BfuAI ACCTGC 1 cut(s) 5947
BfuI GTATCC 2 cut(s) 907, 4684
BglII AGATCT 4 cut(s) 367, 674, 2139, 2395
BlpI GCTNAGC 3 cut(s) 87, 3248, 6510
BmcAI AGTACT 1 cut(s) 860
Bme18I GGWCC 5 cut(s) 1406, 2658, 3059, 3188, 4676
BmeT110I CYCGRG 3 cut(s) 453, 5253, 5524
BmgBI CACGTC 3 cut(s) 1637, 5234, 6004
BmgT120I GGNCC 7 cut(s) 1406, 2658, 3059, 3188, 4583, 4676, 5760
BmrI ACTGGG 3 cut(s) 5836, 6055, 6200
BmuI ACTGGG 3 cut(s) 5836, 6055, 6200
BpiI GAAGAC 9 cut(s) 450, 795, 1012, 1793, 3429, 3887, 3956, 4253, 6057
BplI GAGNNNNNCTC 6 cut(s) 928, 960, 2645, 2677, 5105, 5137
BpmI CTGGAG 5 cut(s) 2220, 2310, 2373, 5493, 6393
Bpu10I CCTNAGC 3 cut(s) 429, 1708, 5070
Bpu1102I GCTNAGC 3 cut(s) 87, 3248, 6510
Bpu14I TTCGAA 1 cut(s) 3547
BpuEI CTTGAG 3 cut(s) 1550, 2672, 3257
BsaAI YACGTR 2 cut(s) 3512, 4846
BsaBI GATNNNNATC 3 cut(s) 98, 5001, 5082
BsaHI GRCGYC 2 cut(s) 232, 1993
BsaI GGTCTC 2 cut(s) 1313, 4822
BsaWI WCCGGW 1 cut(s) 2071
Bse21I CCTNAGG 3 cut(s) 1766, 3779, 5889
Bse3DI GCAATG 4 cut(s) 608, 4143, 4520, 4917
Bse8I GATNNNNATC 3 cut(s) 98, 5001, 5082
BseJI GATNNNNATC 3 cut(s) 98, 5001, 5082
BseMI GCAATG 4 cut(s) 608, 4143, 4520, 4917
BseRI GAGGAG 3 cut(s) 2370, 3767, 5051
BseSI GKGCMC 3 cut(s) 2696, 3157, 3995
BseX3I CGGCCG 1 cut(s) 8
BseYI CCCAGC 2 cut(s) 928, 6276
BsgI GTGCAG 5 cut(s) 1305, 3213, 5397, 5886, 6062
Bsh1236I CGCG 3 cut(s) 1404, 3354, 6127
Bsh1285I CGRYCG 1 cut(s) 11
BshNI GGYRCC 6 cut(s) 231, 3539, 3581, 3657, 5753, 5947
BsiEI CGRYCG 1 cut(s) 11
BsiHKAI GWGCWC 6 cut(s) 279, 959, 1972, 2211, 3567, 4486
BsiHKCI CYCGRG 3 cut(s) 453, 5253, 5524
BsiSI CCGG 3 cut(s) 11, 2072, 3804
BslFI GGGAC 5 cut(s) 890, 3190, 5667, 5990, 6041
BsmAI GTCTC 7 cut(s) 212, 1313, 3196, 4822, 5138, 6411, 6429
BsmFI GGGAC 5 cut(s) 890, 3190, 5667, 5990, 6041
BsmI GAATGC 9 cut(s) 772, 1093, 1848, 2705, 2851, 3555, 5293, 5702, 6217
Bso31I GGTCTC 2 cut(s) 1313, 4822
BsoBI CYCGRG 3 cut(s) 453, 5253, 5524
Bsp119I TTCGAA 1 cut(s) 3547
Bsp1407I TGTACA 2 cut(s) 202, 1012
Bsp1720I GCTNAGC 3 cut(s) 87, 3248, 6510
BspFNI CGCG 3 cut(s) 1404, 3354, 6127
BspHI TCATGA 5 cut(s) 1210, 1383, 3759, 3916, 4225
BspMAI CTGCAG 5 cut(s) 1924, 2902, 5091, 5353, 6111
BspMI ACCTGC 1 cut(s) 5947
BspQI GCTCTTC 2 cut(s) 684, 951
BspT104I TTCGAA 1 cut(s) 3547
BspT107I GGYRCC 6 cut(s) 231, 3539, 3581, 3657, 5753, 5947
BspTI CTTAAG 1 cut(s) 1249
BspTNI GGTCTC 2 cut(s) 1313, 4822
BsrBI CCGCTC 2 cut(s) 1573, 5773
BsrDI GCAATG 4 cut(s) 608, 4143, 4520, 4917
BsrGI TGTACA 2 cut(s) 202, 1012
BssNI GRCGYC 2 cut(s) 232, 1993
BssSI CACGAG 2 cut(s) 1131, 1434
BssT1I CCWWGG 5 cut(s) 1833, 2064, 2932, 3054, 3516
Bst2BI CACGAG 2 cut(s) 1131, 1434
BstACI GRCGYC 2 cut(s) 232, 1993
BstAFI CTTAAG 1 cut(s) 1249
BstAPI GCANNNNNTGC 5 cut(s) 2700, 2897, 6106, 6223, 6232
BstAUI TGTACA 2 cut(s) 202, 1012
BstBAI YACGTR 2 cut(s) 3512, 4846
BstBI TTCGAA 1 cut(s) 3547
BstC8I GCNNGC 9 cut(s) 109, 2082, 3051, 3361, 3493, 3823, 4596, 5097, 6261
BstEII GGTNACC 1 cut(s) 6434
BstENI CCTNNNNNAGG 1 cut(s) 6342
BstFNI CGCG 3 cut(s) 1404, 3354, 6127
BstH2I RGCGCY 2 cut(s) 235, 6510
BstHHI GCGC 4 cut(s) 234, 2851, 3283, 6509
BstMAI GTCTC 7 cut(s) 212, 1313, 3196, 4822, 5138, 6411, 6429
BstMCI CGRYCG 1 cut(s) 11
BstPI GGTNACC 1 cut(s) 6434
BstSLI GKGCMC 3 cut(s) 2696, 3157, 3995
BstUI CGCG 3 cut(s) 1404, 3354, 6127
BstV2I GAAGAC 9 cut(s) 450, 795, 1012, 1793, 3429, 3887, 3956, 4253, 6057
BstXI CCANNNNNNTGG 3 cut(s) 838, 3499, 4811
BstZI CGGCCG 1 cut(s) 8
Bsu36I CCTNAGG 3 cut(s) 1766, 3779, 5889
BsuI GTATCC 2 cut(s) 907, 4684
BtgZI GCGATG 1 cut(s) 1229
BtrI CACGTC 3 cut(s) 1637, 5234, 6004
BtsI GCAGTG 4 cut(s) 102, 156, 6104, 6221
BveI ACCTGC 1 cut(s) 5947
Cac8I GCNNGC 9 cut(s) 109, 2082, 3051, 3361, 3493, 3823, 4596, 5097, 6261
CaiI CAGNNNCTG 5 cut(s) 2002, 2030, 3268, 4994, 6106
CciI TCATGA 5 cut(s) 1210, 1383, 3759, 3916, 4225
CfoI GCGC 4 cut(s) 234, 2851, 3283, 6509
Cfr13I GGNCC 7 cut(s) 1406, 2658, 3059, 3188, 4583, 4676, 5760
CseI GACGC 4 cut(s) 10, 1196, 2001, 6116
Csp6I GTAC 9 cut(s) 203, 824, 859, 1013, 2813, 3386, 3744, 4397, 5674
CspCI CAANNNNNGTGG 4 cut(s) 4827, 4862, 6315, 6350
CviQI GTAC 9 cut(s) 203, 824, 859, 1013, 2813, 3386, 3744, 4397, 5674
DinI GGCGCC 1 cut(s) 233
DraI TTTAAA 2 cut(s) 751, 3768
DraIII CACNNNGTG 1 cut(s) 5204
EaeI YGGCCR 3 cut(s) 8, 2981, 4860
EagI CGGCCG 1 cut(s) 8
Ecl136II GAGCTC 1 cut(s) 2209
EclXI CGGCCG 1 cut(s) 8
Eco130I CCWWGG 5 cut(s) 1833, 2064, 2932, 3054, 3516
Eco147I AGGCCT 3 cut(s) 1713, 4726, 6263
Eco24I GRGCYC 5 cut(s) 18, 2211, 4661, 5897, 6206
Eco31I GGTCTC 2 cut(s) 1313, 4822
Eco32I GATATC 4 cut(s) 1540, 3476, 4372, 5592
Eco47I GGWCC 5 cut(s) 1406, 2658, 3059, 3188, 4676
Eco52I CGGCCG 1 cut(s) 8
Eco53kI GAGCTC 1 cut(s) 2209
Eco57I CTGAAG 8 cut(s) 143, 1006, 1488, 1956, 3768, 4991, 5256, 6476
Eco72I CACGTG 2 cut(s) 3512, 4846
Eco81I CCTNAGG 3 cut(s) 1766, 3779, 5889
Eco88I CYCGRG 3 cut(s) 453, 5253, 5524
Eco91I GGTNACC 1 cut(s) 6434
EcoICRI GAGCTC 1 cut(s) 2209
EcoNI CCTNNNNNAGG 1 cut(s) 6342
EcoO109I RGGNCCY 3 cut(s) 2658, 3188, 5760
EcoO65I GGTNACC 1 cut(s) 6434
EcoRI GAATTC 1 cut(s) 2569
EcoRV GATATC 4 cut(s) 1540, 3476, 4372, 5592
EcoT14I CCWWGG 5 cut(s) 1833, 2064, 2932, 3054, 3516
EcoT22I ATGCAT 7 cut(s) 610, 772, 1819, 1884, 4642, 4740, 6219
EcoT38I GRGCYC 5 cut(s) 18, 2211, 4661, 5897, 6206
EgeI GGCGCC 1 cut(s) 233
EheI GGCGCC 1 cut(s) 233
ErhI CCWWGG 5 cut(s) 1833, 2064, 2932, 3054, 3516
FaqI GGGAC 5 cut(s) 890, 3190, 5667, 5990, 6041
FauI CCCGC 2 cut(s) 1566, 4817
FauNDI CATATG 2 cut(s) 5955, 6297
FbaI TGATCA 3 cut(s) 99, 2784, 3418
FblI GTMKAC 2 cut(s) 69, 5846
FriOI GRGCYC 5 cut(s) 18, 2211, 4661, 5897, 6206
GlaI GCGC 4 cut(s) 233, 2850, 3282, 6508
GsaI CCCAGC 2 cut(s) 932, 6280
GsuI CTGGAG 5 cut(s) 2220, 2310, 2373, 5493, 6393
HaeII RGCGCY 2 cut(s) 235, 6510
HapII CCGG 3 cut(s) 11, 2072, 3804
HgaI GACGC 4 cut(s) 10, 1196, 2001, 6116
HhaI GCGC 4 cut(s) 234, 2851, 3283, 6509
Hin1I GRCGYC 2 cut(s) 232, 1993
Hin6I GCGC 4 cut(s) 232, 2849, 3281, 6507
HinP1I GCGC 4 cut(s) 232, 2849, 3281, 6507
HincII GTYRAC 7 cut(s) 70, 2532, 2635, 3211, 4744, 4893, 6313
HindII GTYRAC 7 cut(s) 70, 2532, 2635, 3211, 4744, 4893, 6313
HindIII AAGCTT 2 cut(s) 437, 6168
HpaII CCGG 3 cut(s) 11, 2072, 3804
Hpy99I CGWCG 3 cut(s) 71, 74, 139
Hsp92I GRCGYC 2 cut(s) 232, 1993
HspAI GCGC 4 cut(s) 232, 2849, 3281, 6507
KasI GGCGCC 1 cut(s) 231
Ksp22I TGATCA 3 cut(s) 99, 2784, 3418
LguI GCTCTTC 2 cut(s) 684, 951
MbiI CCGCTC 2 cut(s) 1573, 5773
MfeI CAATTG 6 cut(s) 480, 1410, 3254, 4065, 4979, 6095
MlsI TGGCCA 2 cut(s) 2983, 4862
MluNI TGGCCA 2 cut(s) 2983, 4862
Mly113I GGCGCC 1 cut(s) 232
MlyI GAGTC 8 cut(s) 800, 2497, 2507, 2992, 4940, 5048, 5245, 5312
MmeI TCCRAC 7 cut(s) 871, 1843, 2253, 2792, 3316, 4792, 5851
Mox20I TGGCCA 2 cut(s) 2983, 4862
Mph1103I ATGCAT 7 cut(s) 610, 772, 1819, 1884, 4642, 4740, 6219
MroXI GAANNNNTTC 2 cut(s) 1146, 6417
MscI TGGCCA 2 cut(s) 2983, 4862
Msp20I TGGCCA 2 cut(s) 2983, 4862
MspA1I CMGCKG 6 cut(s) 641, 2132, 3587, 3881, 4034, 6016
MspCI CTTAAG 1 cut(s) 1249
MspI CCGG 3 cut(s) 11, 2072, 3804
MunI CAATTG 6 cut(s) 480, 1410, 3254, 4065, 4979, 6095
Mva1269I GAATGC 9 cut(s) 772, 1093, 1848, 2705, 2851, 3555, 5293, 5702, 6217
MvnI CGCG 3 cut(s) 1404, 3354, 6127
NarI GGCGCC 1 cut(s) 232
NdeI CATATG 2 cut(s) 5955, 6297
NmeAIII GCCGAG 1 cut(s) 2161
NsiI ATGCAT 7 cut(s) 610, 772, 1819, 1884, 4642, 4740, 6219
NspV TTCGAA 1 cut(s) 3547
OliI CACNNNNGTG 1 cut(s) 632
PaeI GCATGC 1 cut(s) 3825
PaeR7I CTCGAG 1 cut(s) 5253
PagI TCATGA 5 cut(s) 1210, 1383, 3759, 3916, 4225
PaqCI CACCTGC 1 cut(s) 5947
PceI AGGCCT 3 cut(s) 1713, 4726, 6263
PciI ACATGT 3 cut(s) 1015, 2197, 5476
PciSI GCTCTTC 2 cut(s) 684, 951
PcsI WCGNNNNNNNCGW 3 cut(s) 63, 2570, 2863
PctI GAATGC 9 cut(s) 772, 1093, 1848, 2705, 2851, 3555, 5293, 5702, 6217
PdmI GAANNNNTTC 2 cut(s) 1146, 6417
PflFI GACNNNGTC 1 cut(s) 4139
PflMI CCANNNNNTGG 1 cut(s) 2990
PfoI TCCNGGA 4 cut(s) 2186, 5216, 5509, 6376
PleI GAGTC 8 cut(s) 800, 2497, 2507, 2992, 4940, 5047, 5245, 5311
PluTI GGCGCC 1 cut(s) 235
PmaCI CACGTG 2 cut(s) 3512, 4846
PmlI CACGTG 2 cut(s) 3512, 4846
PpsI GAGTC 8 cut(s) 800, 2497, 2507, 2992, 4940, 5047, 5245, 5311
Ppu21I YACGTR 2 cut(s) 3512, 4846
PpuMI RGGWCCY 2 cut(s) 2658, 3188
PscI ACATGT 3 cut(s) 1015, 2197, 5476
PshBI ATTAAT 1 cut(s) 4325
PsiI TTATAA 1 cut(s) 3462
Psp124BI GAGCTC 1 cut(s) 2211
Psp5II RGGWCCY 2 cut(s) 2658, 3188
PspCI CACGTG 2 cut(s) 3512, 4846
PspEI GGTNACC 1 cut(s) 6434
PspFI CCCAGC 2 cut(s) 928, 6276
PspPI GGNCC 7 cut(s) 1406, 2658, 3059, 3188, 4583, 4676, 5760
PspPPI RGGWCCY 2 cut(s) 2658, 3188
PsrI GAACNNNNNNTAC 2 cut(s) 5959, 5991
PstI CTGCAG 5 cut(s) 1924, 2902, 5091, 5353, 6111
PstNI CAGNNNCTG 5 cut(s) 2002, 2030, 3268, 4994, 6106
PsyI GACNNNGTC 1 cut(s) 4139
PvuII CAGCTG 5 cut(s) 641, 2132, 3881, 4034, 6016
RsaI GTAC 9 cut(s) 204, 825, 860, 1014, 2814, 3387, 3745, 4398, 5675
RsaNI GTAC 9 cut(s) 203, 824, 859, 1013, 2813, 3386, 3744, 4397, 5674
SacI GAGCTC 1 cut(s) 2211
SalI GTCGAC 1 cut(s) 68
SapI GCTCTTC 2 cut(s) 684, 951
Sau96I GGNCC 7 cut(s) 1406, 2658, 3059, 3188, 4583, 4676, 5760
ScaI AGTACT 1 cut(s) 860
SchI GAGTC 8 cut(s) 800, 2497, 2507, 2992, 4940, 5048, 5245, 5312
SfoI GGCGCC 1 cut(s) 233
Sfr274I CTCGAG 1 cut(s) 5253
SfuI TTCGAA 1 cut(s) 3547
SgrDI CGTCGACG 1 cut(s) 68
SinI GGWCC 5 cut(s) 1406, 2658, 3059, 3188, 4676
SlaI CTCGAG 1 cut(s) 5253
SmlI CTYRAG 5 cut(s) 1249, 1565, 2651, 3236, 5253
SmoI CTYRAG 5 cut(s) 1249, 1565, 2651, 3236, 5253
SpeI ACTAGT 2 cut(s) 4718, 5320
SphI GCATGC 1 cut(s) 3825
SseBI AGGCCT 3 cut(s) 1713, 4726, 6263
SspDI GGCGCC 1 cut(s) 231
SspI AATATT 2 cut(s) 1147, 6398
SstI GAGCTC 1 cut(s) 2211
StuI AGGCCT 3 cut(s) 1713, 4726, 6263
StyI CCWWGG 5 cut(s) 1833, 2064, 2932, 3054, 3516
TaqII GACCGA 1 cut(s) 6453
TatI WGTACW 4 cut(s) 202, 858, 1012, 3385
TauI GCSGC 4 cut(s) 2080, 2891, 3587, 5566
TspGWI ACGGA 3 cut(s) 366, 2219, 2281
Tth111I GACNNNGTC 1 cut(s) 4139
Van91I CCANNNNNTGG 1 cut(s) 2990
Vha464I CTTAAG 1 cut(s) 1249
VpaK11BI GGWCC 5 cut(s) 1406, 2658, 3059, 3188, 4676
VspI ATTAAT 1 cut(s) 4325
XagI CCTNNNNNAGG 1 cut(s) 6342
XcmI CCANNNNNNNNNTGG 4 cut(s) 838, 2269, 2991, 5867
XhoI CTCGAG 1 cut(s) 5253
XmiI GTMKAC 2 cut(s) 69, 5846
XmnI GAANNNNTTC 2 cut(s) 1146, 6417
ZrmI AGTACT 1 cut(s) 860
Zsp2I ATGCAT 7 cut(s) 610, 772, 1819, 1884, 4642, 4740, 6219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.