pycom14g03440

Protein virilizer homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0010141
Physical Location & Seq
Reverse (-)
2859851 .. 2866068
6218 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g03440.11

Sequence Viewer

Length: 2529 bp
ATGGAGCTCCATAGGGCGTTACATTCCTCTTCTCCTGGGTCAAATAGAAAAGATGCCCCCACACGGCTGTTGGAATGGATAGATGCTGGTGTTGTATATCATAAAAATGGGACAACAGGTCTTATACAGTACGCTGCTGTGTTGGCTTCTGGAGCAGATGCCCACTTGACTTCAAACATCCCACTGGTGTCAGATTTGGCTGATGTAGAAAATGCTGTTGGAGATACCTCTGGTGGTTCTGATGTTAATGTTATGGAAAATCTTGGAAAGTTTATATCTGACAAGACTTTTGATGGTGTTAATCTTCGTGACTCTTCCGTAGCACAGTTGACAACAGCATTTCGCATTTTAGCGTTCATTTCAGAGAACTCAACTGTTGCTGCTACTCTGTACGATGAAGGTGTTGTACCAATAATATATGCAGTTGTGGTCAATTGTAGGGGTATGCTTGAGAGGTCCTCGAACAGTTATGATTACCTTGTTGATGAGGAGTGCAATACTACATCAGATTTATTGTCAGAACGTAATCGTGAGCAGAGTTTAGTTGATCATCTGATTCCTACAATTGTGTTGTCGATCAATTTGTTGCAGAAATTGCAGGAAGTACAAGAGCAGCACAGAAATACCAAGTTATTGAATGCCCTTCTACGATTGCACCGAGAAGTAAGTCCAAAATTAGCCGCATGTGCAGCGGACTTATCCTCTCCTTATCCTGATTCTGCGCTTGGTTTTGGAGCTATCTGTCACCTTCTTGCGTCGGCACTTGCTTGTTGGCCAGTCTATGGCTGGACTCCTGGTCTTTTCCACTCCCTCCTTGCAAATGTTCAAGTTCCTTCCTTGCTGGCCTTGGGTCCAAAGGAAACATGTAGTTTGCTTTGTCTTCTGAATGATTTATTGCCTGATGAAGGGGTCTGGCTCTGGAAAAATGGGATGCCCTTGTTGAGTGCCCTTAGAAATTTGTCTGTTGGGACTGTTTTGGGTCCTCAGAAGGAGAGACAGGTCAATTGGTATTTGCATCATGAGCATCTGGAGAAGCTGCTCAGCCAATTGACGCCACATCTTGACAAAGTTGCCCAGATTATCCAACATTATGCTATTTCCGCACTGGTGGTCATTCAAGACATGCTTCGAGTCTTTATTATTCGTATTGCTTGCCAAAGAGCAGAAAGTTTTCCCGTACTTTTACGACCCATATTCTCATGCATTCGTGATCATGCTTATGACTCGCCTTCGCCATCAGATACGGATGCTTATAAGGTTTACAGATATCTTGATTTCATTGCTAGCTTATTGGAGCATCCACGTGCCGAGGGACTATTATTAAAGGAGGGTGCATTTCAGTTGCTACCTAGAGTGTTGAATAGGTGTTTAATTGCCATTGAGACAGGTGGAATACAGAATCTCGATGTTAGAAGTTCAGCTGCATTTGGATTCGGTTTGCTTAGTTGGTGCCTCCCTGTATTCAAGTCCTTCTCATTGATTTTTAATTCTCAGGCATCCCTGCACCATGCGGGGAAAAATGATTCGAATGAATTTGAAAAGTTGACTACTGATGATTGCAAAATCTTTTTAAAGTATCTCCTCAGGTTTTGTCAGGTTCTACCAGTCGGAAAAGAATTACTTGCCTGTCTTATTGCTTTTAAAGAACTGGGTGCTTGTAGTGAAGGTAAAAAAGCTTTAGCAGCCACTTTGTATCCTGCTCTCTCTGTTGAGGATCATGAATGGAGAAAGAGTCCCCCATTGTTATGTTGCTGTAAAAACTTGTTAAGATCAGTTGACTCGAAAGAAGGGTTGTCAAGTTATGGAATTGAGACTGTCAATGCATTGTCTCTGGGATCTTTCCGCTTCTGCCTTGATGGGGAAAGATTGAATCCAGACATGGTTGTTGCGGTAAAATTCCTGTTCGGAGTTTCTGATGATGATATAGCTGAAGCAGATGGTGTGCCTGATGGAAACTTGAGCTATATTTATGAATTGACCTCTCTATTGAAGACCATGGAGGCTGACCATATTGCTGACTCTGATACTCAAACCCCTTTGTATGAGGTTCTAGAATCTGCGAAATCATTAACATTGCTGTTGCAGAAACCTAGTTCGTTGTTAAAGGTGGATGATGTCTTTTCTGCTGATTCCATTCCTCTGCCGCCAAATATTCTAGTTTCTTCAAATATCCATATAATGCCAGATGGTGGTGCTGAAATGGCTGACGATTATCTTTACCAAGGATCGAACTTGGAGACAAGTTTCAGTGGGATTGTCCCGATAAATCATCAGAATCAAATCTTAAGAGGAAACAGCCGCCATCACTTGATGGCCCAAATAGGCGTGCGAGAGGAGAGAACTCCACGGCTGAGATCACAAATCAAAATGTGTTTTCACGAGGGCTGGGTTCAACTATTGCGTCATCGGGTCCTACTCGTAGGGATACCTTTCGGCAGCGCAAACCAAATACCAGCCGGCCTCCTTCCATGCATGTTGATGACTATGTTGCAAGAGAAAGGAATGATGGCGTTTCTAATTCTAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VIR_N

Protein Analysis

843

Amino Acids

92.9

Weight (kDa)

5.58

Isoelectric Point (pI)

40.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010141)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G05680 AT3G05680
fragaria_vesca FvH4_6g20410 FvH4_6g20410 FvH4_6g20410
malus_domestica MD12G1041200.v1.1 MD12G1041400.v1.1 MD14G1040500.v1.1
prunus_persica Prupe.7G093800_v2.0.a1
pyrus_communis pycom12g03590 pycom14g03440
rosa_chinensis RchiOBHm_Chr3g0476141
rosa_laevigata RLG00000023788
rosa_multiflora Rmu_sc0000114.1_g000025
rosa_roxburghii Rroxscaffold_6G00405450
rosa_rugosa Rorug03G0153000
rosa_samantha Rh3AG204100 Rh3BG234300 Rh3CG229700 Rh3DG229700
rosa_wichuraiana Rw3G018550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1254
AccB1I GGYRCC 1 cut(s) 1449
AccB7I CCANNNNNTGG 2 cut(s) 782, 2189
AciI CCGC 8 cut(s) 681, 692, 1101, 1511, 1843, 1889, 2144, 2299
AclWI GGATC 3 cut(s) 1722, 1843, 2233
AcoI YGGCCR 1 cut(s) 773
AcsI RAATTY 3 cut(s) 955, 1532, 1895
AcuI CTGAAG 1 cut(s) 1950
AcvI CACGTG 1 cut(s) 1304
AcyI GRCGYC 1 cut(s) 1052
AfaI GTAC 5 cut(s) 131, 392, 408, 606, 1179
AfiI CCNNNNNNNGG 5 cut(s) 63, 782, 905, 1858, 2189
AflII CTTAAG 1 cut(s) 2284
AflIII ACRYGT 1 cut(s) 863
AhdI GACNNNNNGTC 2 cut(s) 117, 795
AjnI CCWGG 2 cut(s) 34, 793
AjuI GAANNNNNNNTTGG 2 cut(s) 201, 233
AluBI AGCT 8 cut(s) 7, 737, 1036, 1287, 1421, 1676, 1928, 1962
AluI AGCT 8 cut(s) 7, 737, 1036, 1287, 1421, 1676, 1928, 1962
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 5 cut(s) 988, 1376, 1805, 1833, 2231
AlwI GGATC 3 cut(s) 1722, 1843, 2233
AoxI GGCC 4 cut(s) 773, 843, 2313, 2458
ApeKI GCWGC 8 cut(s) 134, 380, 613, 689, 1036, 1421, 1682, 2436
ApoI RAATTY 3 cut(s) 955, 1532, 1895
ArsI GACNNNNNNTTYG 2 cut(s) 272, 304
Asp700I GAANNNNTTC 1 cut(s) 1170
AspLEI GCGC 2 cut(s) 724, 2441
AspS9I GGNCC 5 cut(s) 456, 851, 980, 2314, 2410
AsuHPI GGTGA 1 cut(s) 737
AsuII TTCGAA 1 cut(s) 1526
AsuNHI GCTAGC 1 cut(s) 1283
AvaII GGWCC 4 cut(s) 456, 851, 980, 2410
AxyI CCTNAGG 1 cut(s) 1583
BaeGI GKGCMC 1 cut(s) 949
BalI TGGCCA 1 cut(s) 775
BanI GGYRCC 1 cut(s) 1449
BanII GRGCYC 1 cut(s) 9
BarI GAAGNNNNNNTAC 2 cut(s) 390, 422
BauI CACGAG 1 cut(s) 2378
BbrPI CACGTG 1 cut(s) 1304
BbsI GAAGAC 2 cut(s) 872, 1997
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 8 cut(s) 121, 367, 625, 701, 1023, 1408, 1694, 2448
BccI CCATC 9 cut(s) 287, 1243, 1850, 1931, 1943, 2180, 2305, 2310, 2500
BceAI ACGGC 2 cut(s) 80, 2363
BciT130I CCWGG 2 cut(s) 36, 795
BciVI GTATCC 2 cut(s) 1704, 2418
BclI TGATCA 2 cut(s) 547, 1210
BcoDI GTCTC 5 cut(s) 988, 1376, 1805, 1833, 2231
BfaI CTAG 5 cut(s) 1284, 1350, 2051, 2091, 2156
BfrI CTTAAG 1 cut(s) 2284
BfuI GTATCC 2 cut(s) 1704, 2418
BlpI GCTNAGC 1 cut(s) 1040
Bme1390I CCNGG 2 cut(s) 36, 795
Bme18I GGWCC 4 cut(s) 456, 851, 980, 2410
BmeRI GACNNNNNGTC 2 cut(s) 117, 795
BmgT120I GGNCC 5 cut(s) 456, 851, 980, 2314, 2410
BmiI GGNNCC 4 cut(s) 852, 981, 1451, 2411
BmrFI CCNGG 2 cut(s) 36, 795
BmrI ACTGGG 1 cut(s) 1658
BmsI GCATC 9 cut(s) 43, 73, 148, 921, 1024, 1033, 1237, 1306, 1505
BmtI GCTAGC 1 cut(s) 1287
BmuI ACTGGG 1 cut(s) 1658
BpiI GAAGAC 2 cut(s) 872, 1997
BplI GAGNNNNNCTC 2 cut(s) 443, 475
BpmI CTGGAG 2 cut(s) 171, 1049
Bpu1102I GCTNAGC 1 cut(s) 1040
Bpu14I TTCGAA 1 cut(s) 1526
BpuEI CTTGAG 2 cut(s) 470, 1978
BsaAI YACGTR 1 cut(s) 1304
BsaHI GRCGYC 1 cut(s) 1052
BsaJI CCNNGG 6 cut(s) 35, 846, 1308, 1995, 2221, 2345
BsaXI ACNNNNNCTCC 2 cut(s) 1717, 1747
Bsc4I CCNNNNNNNGG 5 cut(s) 63, 782, 905, 1858, 2189
Bse118I RCCGGY 1 cut(s) 2456
Bse1I ACTGG 5 cut(s) 189, 776, 1110, 1604, 1653
Bse21I CCTNAGG 1 cut(s) 1583
Bse3DI GCAATG 2 cut(s) 1278, 2072
BseBI CCWGG 2 cut(s) 36, 795
BseDI CCNNGG 6 cut(s) 35, 846, 1308, 1995, 2221, 2345
BseGI GGATG 6 cut(s) 177, 936, 1252, 1297, 1496, 2116
BseLI CCNNNNNNNGG 5 cut(s) 63, 782, 905, 1858, 2189
BseMI GCAATG 2 cut(s) 1278, 2072
BseMII CTCAG 5 cut(s) 998, 1054, 1505, 1597, 2342
BseNI ACTGG 5 cut(s) 189, 776, 1110, 1604, 1653
BseRI GAGGAG 3 cut(s) 503, 1571, 2348
BseSI GKGCMC 1 cut(s) 949
BseXI GCAGC 8 cut(s) 121, 367, 625, 701, 1023, 1408, 1694, 2448
BseYI CCCAGC 1 cut(s) 2385
BsgI GTGCAG 2 cut(s) 708, 1487
BshFI GGCC 4 cut(s) 775, 845, 2315, 2460
BshNI GGYRCC 1 cut(s) 1449
BsiHKAI GWGCWC 1 cut(s) 9
BsiSI CCGG 1 cut(s) 2457
BslFI GGGAC 5 cut(s) 124, 982, 1326, 1719, 2243
BslI CCNNNNNNNGG 5 cut(s) 63, 782, 905, 1858, 2189
BsmAI GTCTC 5 cut(s) 988, 1376, 1805, 1833, 2231
BsmFI GGGAC 5 cut(s) 124, 982, 1326, 1719, 2243
BsmI GAATGC 2 cut(s) 643, 1203
BsnI GGCC 4 cut(s) 775, 845, 2315, 2460
Bsp119I TTCGAA 1 cut(s) 1526
Bsp1286I GDGCHC 2 cut(s) 9, 949
Bsp143I GATC 8 cut(s) 547, 576, 1210, 1714, 1769, 1835, 2225, 2354
Bsp1720I GCTNAGC 1 cut(s) 1040
Bsp19I CCATGG 1 cut(s) 1995
BspACI CCGC 8 cut(s) 681, 692, 1101, 1511, 1843, 1889, 2144, 2299
BspANI GGCC 4 cut(s) 775, 845, 2315, 2460
BspCNI CTCAG 5 cut(s) 997, 1053, 1504, 1596, 2343
BspHI TCATGA 2 cut(s) 1018, 1717
BspLI GGNNCC 4 cut(s) 852, 981, 1451, 2411
BspOI GCTAGC 1 cut(s) 1287
BspPI GGATC 3 cut(s) 1722, 1843, 2233
BspT104I TTCGAA 1 cut(s) 1526
BspT107I GGYRCC 1 cut(s) 1449
BspTI CTTAAG 1 cut(s) 2284
BsrDI GCAATG 2 cut(s) 1278, 2072
BsrFI RCCGGY 1 cut(s) 2456
BsrI ACTGG 5 cut(s) 189, 776, 1110, 1604, 1653
BssAI RCCGGY 1 cut(s) 2456
BssECI CCNNGG 6 cut(s) 35, 846, 1308, 1995, 2221, 2345
BssMI GATC 8 cut(s) 547, 576, 1210, 1714, 1769, 1835, 2225, 2354
BssNI GRCGYC 1 cut(s) 1052
BssSI CACGAG 1 cut(s) 2378
BssT1I CCWWGG 3 cut(s) 846, 1995, 2221
Bst2BI CACGAG 1 cut(s) 2378
Bst2UI CCWGG 2 cut(s) 36, 795
Bst4CI ACNGT 6 cut(s) 129, 327, 376, 467, 973, 1816
Bst6I CTCTTC 2 cut(s) 34, 319
BstACI GRCGYC 1 cut(s) 1052
BstAFI CTTAAG 1 cut(s) 2284
BstAPI GCANNNNNTGC 1 cut(s) 595
BstBAI YACGTR 1 cut(s) 1304
BstBI TTCGAA 1 cut(s) 1526
BstC8I GCNNGC 5 cut(s) 843, 1153, 1285, 2327, 2458
BstDEI CTNAG 7 cut(s) 950, 984, 1040, 1442, 1491, 1583, 2351
BstDSI CCRYGG 2 cut(s) 1995, 2345
BstENI CCTNNNNNAGG 1 cut(s) 903
BstF5I GGATG 6 cut(s) 177, 936, 1252, 1297, 1496, 2116
BstHHI GCGC 2 cut(s) 724, 2441
BstKTI GATC 8 cut(s) 550, 579, 1213, 1717, 1772, 1838, 2228, 2357
BstMAI GTCTC 5 cut(s) 988, 1376, 1805, 1833, 2231
BstMBI GATC 8 cut(s) 547, 576, 1210, 1714, 1769, 1835, 2225, 2354
BstMWI GCNNNNNNNGC 9 cut(s) 143, 152, 595, 686, 689, 1021, 1100, 1682, 2201
BstNI CCWGG 2 cut(s) 36, 795
BstNSI RCATGY 4 cut(s) 687, 867, 1126, 2476
BstSCI CCNGG 2 cut(s) 34, 793
BstSLI GKGCMC 1 cut(s) 949
BstV1I GCAGC 8 cut(s) 121, 367, 625, 701, 1023, 1408, 1694, 2448
BstV2I GAAGAC 2 cut(s) 872, 1997
BstX2I RGATCY 1 cut(s) 1835
BstYI RGATCY 1 cut(s) 1835
Bsu36I CCTNAGG 1 cut(s) 1583
BsuI GTATCC 2 cut(s) 1704, 2418
BsuRI GGCC 4 cut(s) 775, 845, 2315, 2460
BtgI CCRYGG 2 cut(s) 1995, 2345
BtsCI GGATG 6 cut(s) 177, 936, 1252, 1297, 1496, 2116
BtsIMutI CAGTG 3 cut(s) 182, 1103, 2254
Cac8I GCNNGC 5 cut(s) 843, 1153, 1285, 2327, 2458
CciI TCATGA 2 cut(s) 1018, 1717
CfoI GCGC 2 cut(s) 724, 2441
Cfr10I RCCGGY 1 cut(s) 2456
Cfr13I GGNCC 5 cut(s) 456, 851, 980, 2314, 2410
CseI GACGC 3 cut(s) 744, 1060, 2390
Csp6I GTAC 5 cut(s) 130, 391, 407, 605, 1178
CviQI GTAC 5 cut(s) 130, 391, 407, 605, 1178
DdeI CTNAG 7 cut(s) 950, 984, 1040, 1442, 1491, 1583, 2351
DpnI GATC 8 cut(s) 549, 578, 1212, 1716, 1771, 1837, 2227, 2356
DpnII GATC 8 cut(s) 547, 576, 1210, 1714, 1769, 1835, 2225, 2354
DraI TTTAAA 2 cut(s) 1572, 1642
DriI GACNNNNNGTC 2 cut(s) 117, 795
EaeI YGGCCR 1 cut(s) 773
Eam1104I CTCTTC 2 cut(s) 34, 319
Eam1105I GACNNNNNGTC 2 cut(s) 117, 795
EarI CTCTTC 2 cut(s) 34, 319
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 3 cut(s) 846, 1995, 2221
Eco24I GRGCYC 1 cut(s) 9
Eco32I GATATC 1 cut(s) 1268
Eco47I GGWCC 4 cut(s) 456, 851, 980, 2410
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 1950
Eco72I CACGTG 1 cut(s) 1304
Eco81I CCTNAGG 1 cut(s) 1583
EcoICRI GAGCTC 1 cut(s) 7
EcoNI CCTNNNNNAGG 1 cut(s) 903
EcoO109I RGGNCCY 3 cut(s) 456, 980, 2410
EcoRII CCWGG 2 cut(s) 34, 793
EcoRV GATATC 1 cut(s) 1268
EcoT14I CCWWGG 3 cut(s) 846, 1995, 2221
EcoT22I ATGCAT 3 cut(s) 1205, 1825, 2474
EcoT38I GRGCYC 1 cut(s) 9
ErhI CCWWGG 3 cut(s) 846, 1995, 2221
FalI AAGNNNNNCTT 4 cut(s) 1110, 1142, 1605, 1637
FaqI GGGAC 5 cut(s) 124, 982, 1326, 1719, 2243
FauI CCCGC 1 cut(s) 1504
FbaI TGATCA 2 cut(s) 547, 1210
FokI GGATG 6 cut(s) 164, 943, 1259, 1284, 1483, 2123
FriOI GRGCYC 1 cut(s) 9
FspBI CTAG 5 cut(s) 1284, 1350, 2051, 2091, 2156
GlaI GCGC 2 cut(s) 723, 2440
GsaI CCCAGC 1 cut(s) 2389
GsuI CTGGAG 2 cut(s) 171, 1049
HaeIII GGCC 4 cut(s) 775, 845, 2315, 2460
HapII CCGG 1 cut(s) 2457
HgaI GACGC 3 cut(s) 744, 1060, 2390
HhaI GCGC 2 cut(s) 724, 2441
Hin1I GRCGYC 1 cut(s) 1052
Hin6I GCGC 2 cut(s) 722, 2439
HinP1I GCGC 2 cut(s) 722, 2439
HincII GTYRAC 3 cut(s) 330, 1545, 1777
HindII GTYRAC 3 cut(s) 330, 1545, 1777
HindIII AAGCTT 1 cut(s) 1674
HpaII CCGG 1 cut(s) 2457
HphI GGTGA 1 cut(s) 737
Hpy166II GTNNAC 4 cut(s) 330, 1261, 1545, 1777
Hpy8I GTNNAC 4 cut(s) 330, 1261, 1545, 1777
Hpy99I CGWCG 1 cut(s) 760
HpyCH4III ACNGT 6 cut(s) 129, 327, 376, 467, 973, 1816
HpyCH4IV ACGT 2 cut(s) 523, 1303
HpyF10VI GCNNNNNNNGC 9 cut(s) 143, 152, 595, 686, 689, 1021, 1100, 1682, 2201
HpyF3I CTNAG 7 cut(s) 950, 984, 1040, 1442, 1491, 1583, 2351
HpySE526I ACGT 2 cut(s) 523, 1303
Hsp92I GRCGYC 1 cut(s) 1052
HspAI GCGC 2 cut(s) 722, 2439
KroI GCCGGC 1 cut(s) 2456
KroNI GCCGGC 1 cut(s) 2458
Ksp22I TGATCA 2 cut(s) 547, 1210
Kzo9I GATC 8 cut(s) 547, 576, 1210, 1714, 1769, 1835, 2225, 2354
LmnI GCTCC 5 cut(s) 4, 12, 152, 734, 1294
Lsp1109I GCAGC 8 cut(s) 121, 367, 625, 701, 1023, 1408, 1694, 2448
LweI GCATC 9 cut(s) 43, 73, 148, 921, 1024, 1033, 1237, 1306, 1505
MaeI CTAG 5 cut(s) 1284, 1350, 2051, 2091, 2156
MaeII ACGT 2 cut(s) 523, 1303
MaeIII GTNAC 3 cut(s) 18, 308, 743
MalI GATC 8 cut(s) 549, 578, 1212, 1716, 1771, 1837, 2227, 2356
MboI GATC 8 cut(s) 547, 576, 1210, 1714, 1769, 1835, 2225, 2354
MboII GAAGA 6 cut(s) 21, 296, 306, 872, 2002, 2154
MfeI CAATTG 4 cut(s) 433, 564, 1003, 1046
MflI RGATCY 1 cut(s) 1835
MhlI GDGCHC 2 cut(s) 9, 949
MlsI TGGCCA 1 cut(s) 775
MluNI TGGCCA 1 cut(s) 775
MlyI GAGTC 7 cut(s) 305, 784, 1140, 1217, 1741, 1772, 2012
MmeI TCCRAC 4 cut(s) 51, 199, 1108, 1588
Mox20I TGGCCA 1 cut(s) 775
Mph1103I ATGCAT 3 cut(s) 1205, 1825, 2474
MroNI GCCGGC 1 cut(s) 2456
MroXI GAANNNNTTC 1 cut(s) 1170
MscI TGGCCA 1 cut(s) 775
MslI CAYNNNNRTG 5 cut(s) 105, 1218, 1302, 1744, 2477
Msp20I TGGCCA 1 cut(s) 775
MspA1I CMGCKG 2 cut(s) 692, 1421
MspCI CTTAAG 1 cut(s) 2284
MspI CCGG 1 cut(s) 2457
MspR9I CCNGG 2 cut(s) 36, 795
MunI CAATTG 4 cut(s) 433, 564, 1003, 1046
Mva1269I GAATGC 2 cut(s) 643, 1203
MvaI CCWGG 2 cut(s) 36, 795
MwoI GCNNNNNNNGC 9 cut(s) 143, 152, 595, 686, 689, 1021, 1100, 1682, 2201
NaeI GCCGGC 1 cut(s) 2458
NcoI CCATGG 1 cut(s) 1995
NdeII GATC 8 cut(s) 547, 576, 1210, 1714, 1769, 1835, 2225, 2354
NgoMIV GCCGGC 1 cut(s) 2456
NheI GCTAGC 1 cut(s) 1283
NlaIV GGNNCC 4 cut(s) 852, 981, 1451, 2411
NmeAIII GCCGAG 1 cut(s) 1333
NmuCI GTSAC 2 cut(s) 308, 743
NsiI ATGCAT 3 cut(s) 1205, 1825, 2474
NspI RCATGY 4 cut(s) 687, 867, 1126, 2476
NspV TTCGAA 1 cut(s) 1526
PagI TCATGA 2 cut(s) 1018, 1717
PciI ACATGT 1 cut(s) 863
PcsI WCGNNNNNNNCGW 1 cut(s) 655
PctI GAATGC 2 cut(s) 643, 1203
PdiI GCCGGC 1 cut(s) 2458
PdmI GAANNNNTTC 1 cut(s) 1170
PfeI GAWTC 9 cut(s) 556, 716, 1399, 1431, 1523, 1870, 2054, 2129, 2275
PflMI CCANNNNNTGG 2 cut(s) 782, 2189
PleI GAGTC 7 cut(s) 305, 784, 1139, 1217, 1740, 1772, 2012
PmaCI CACGTG 1 cut(s) 1304
PmlI CACGTG 1 cut(s) 1304
PpsI GAGTC 7 cut(s) 305, 784, 1139, 1217, 1740, 1772, 2012
Ppu21I YACGTR 1 cut(s) 1304
PpuMI RGGWCCY 3 cut(s) 456, 980, 2410
PscI ACATGT 1 cut(s) 863
PsiI TTATAA 1 cut(s) 1254
Psp124BI GAGCTC 1 cut(s) 9
Psp5II RGGWCCY 3 cut(s) 456, 980, 2410
Psp6I CCWGG 2 cut(s) 34, 793
PspCI CACGTG 1 cut(s) 1304
PspFI CCCAGC 1 cut(s) 2385
PspGI CCWGG 2 cut(s) 34, 793
PspN4I GGNNCC 4 cut(s) 852, 981, 1451, 2411
PspPI GGNCC 5 cut(s) 456, 851, 980, 2314, 2410
PspPPI RGGWCCY 3 cut(s) 456, 980, 2410
PsuI RGATCY 1 cut(s) 1835
PvuII CAGCTG 1 cut(s) 1421
RsaI GTAC 5 cut(s) 131, 392, 408, 606, 1179
RsaNI GTAC 5 cut(s) 130, 391, 407, 605, 1178
RseI CAYNNNNRTG 5 cut(s) 105, 1218, 1302, 1744, 2477
SacI GAGCTC 1 cut(s) 9
Sau3AI GATC 8 cut(s) 547, 576, 1210, 1714, 1769, 1835, 2225, 2354
Sau96I GGNCC 5 cut(s) 456, 851, 980, 2314, 2410
SchI GAGTC 7 cut(s) 305, 784, 1140, 1217, 1741, 1772, 2012
ScrFI CCNGG 2 cut(s) 36, 795
SduI GDGCHC 2 cut(s) 9, 949
SfaNI GCATC 9 cut(s) 43, 73, 148, 921, 1024, 1033, 1237, 1306, 1505
SfuI TTCGAA 1 cut(s) 1526
SinI GGWCC 4 cut(s) 456, 851, 980, 2410
SmiMI CAYNNNNRTG 5 cut(s) 105, 1218, 1302, 1744, 2477
SmlI CTYRAG 3 cut(s) 449, 1957, 2284
SmoI CTYRAG 3 cut(s) 449, 1957, 2284
SsiI CCGC 8 cut(s) 681, 692, 1101, 1511, 1843, 1889, 2144, 2299
SspI AATATT 1 cut(s) 2152
SspMI CTAG 5 cut(s) 1284, 1350, 2051, 2091, 2156
SstI GAGCTC 1 cut(s) 9
StyD4I CCNGG 2 cut(s) 34, 793
StyI CCWWGG 3 cut(s) 846, 1995, 2221
TaaI ACNGT 6 cut(s) 129, 327, 376, 467, 973, 1816
TaiI ACGT 2 cut(s) 526, 1306
TaqI TCGA 7 cut(s) 461, 575, 1129, 1404, 1526, 1781, 2228
TatI WGTACW 1 cut(s) 604
TauI GCSGC 3 cut(s) 683, 2146, 2301
TfiI GAWTC 9 cut(s) 556, 716, 1399, 1431, 1523, 1870, 2054, 2129, 2275
TscAI CASTG 3 cut(s) 189, 1110, 2254
TseFI GTSAC 2 cut(s) 308, 743
TseI GCWGC 8 cut(s) 134, 380, 613, 689, 1036, 1421, 1682, 2436
Tsp45I GTSAC 2 cut(s) 308, 743
TspDTI ATGAA 7 cut(s) 346, 411, 918, 1267, 1545, 1734, 1986
TspGWI ACGGA 2 cut(s) 307, 1259
TspRI CASTG 3 cut(s) 189, 1110, 2254
Van91I CCANNNNNTGG 2 cut(s) 782, 2189
Vha464I CTTAAG 1 cut(s) 2284
VpaK11BI GGWCC 4 cut(s) 456, 851, 980, 2410
XagI CCTNNNNNAGG 1 cut(s) 903
XapI RAATTY 3 cut(s) 955, 1532, 1895
XbaI TCTAGA 1 cut(s) 2050
XceI RCATGY 4 cut(s) 687, 867, 1126, 2476
XcmI CCANNNNNNNNNTGG 2 cut(s) 67, 783
XmnI GAANNNNTTC 1 cut(s) 1170
XspI CTAG 5 cut(s) 1284, 1350, 2051, 2091, 2156
Zsp2I ATGCAT 3 cut(s) 1205, 1825, 2474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.