Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006985

Physical Location & Seq

Genomic Coordinates Forward (+)

16351342 .. 16355409

Gene Structure 4068 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g22730.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGCAGAGGCCTCCACCTGAAGACTTTGCTTTGAAGGAGACCAAACCCCATCTTGGTGGGGGGAGGATCTCCGGCGACAAGCACACGAGCACCTATGACCTCGTTGAGCAGATGCAGTATCTCTATGTCCGAGTTGTGAAGGCCAAGGACTTACCTTCCAAGGATGTTACCGGTAGCTGTGACCCTTATGTTGAAGTTAAGCTGGGGAACTACAAGGGTGCAACTCGGCATTTTGAGAAGAAGTCCAATCCGGAGTGGAATCAGGTGTTTGCATTCTCGAAGGACCGGATCCAGGCTTCAGCTCTTGAGGTGATTGTGAAGGATAAGGATCTTATGAAGGATGACCTCATTGGATATGTTATATTTGACCTGAACGAGGTTCCGAAAAGGGTTCCTCCTGATAGTCCCCTGGCGCCACAATGGTATAGATTGGAGGATAGGAAGGGGGACAAGGCTAGGGGTGAGTTGATGTTGGCTGTTTGGATGGGTACTCAAGCTGATGAAGCATTTCCTGAAGCATGGCATTCGGATGCTGCCACAGTTAGTGGAGCTGATAGTCTGTCAAATATTCGGTCGAAGGTGTATCTCTCTCCCAAACTATGGTATTTGAGGGTTAATGTGATTGAGGCTCAGGACTTGATGCCAAGTGATAAAGGCAGGTATCCCGAAGTTTATGTGAAGGCTATCCTGGGAAATCAGGCTTTGAGAACTCGAATTTCACAAAGCAGGAGTATAAATCCCATGTGGAATGAAGATCTAATGTTTGTAGCATCAGAGCCGTTTGAGGAGCCGTTGATTTTAAGTGTGGAAGATAGAATCGCGCCAAACAAGGATGAAGTTCTGGGGAGGTGTGCCATTCCTTTGCAGTATGTGCCCCGAAGGTATGATCATAAACCTGTGAACACTAGCTGGCACAATCTTGAGAAGCATATTATTGTAGAAGGTGAAAAGAAGAAGGATGTTAAGTTTGCCAGTAGGATTCATATGAGGATCTGTCTAGAAGGTGGTTACCATGTGCTTGATGAGTCAACACACTATAGCAGTGATCTTAGACCAACAGCCAAACCATTGTGGAAGTCCAGCATAGGGGTTCTGGAAGTGGGAATCCTGAATGCTCAGGGGTTGATGCCAATGAAGACAAAAGATGGGAGGGGAACAACAGATGCCTACTGTGTTGCAAAATATGGGCAGAAGTGGGTTCGTACAAGAACCATTATCGATAGCCTTGCTCCCAGGTGGAATGAGCAATACACTTGGGAGGTTTTTGATCCTTGCACCGTCATCACAATTGGGGTATTTGATAACTGTCATTTGCATGGAGGAGACAAGGCTGCCGGGGCAAAGGATTCACGAATTGGGAAGGTCAGGATTCGTCTCTCTACCCTTGAAACTGATCGGGTGTACACGCACTCTTATCCTCTTCTGGTTCTGCACCCAAATGGTGTGAAGAAGATGGGTGAAATACATATGGCTGTGAGGTTCACCTGCTCTTCGTTGCTGAACATGATGCATATGTACTCCCAACCACTGTTACCCAAAATGCATTATCTTCATCCACTAACTGTAAGCCAGCTTGATAGCTTGAGGCACCAGGCCACTCAGATTGTATCAGTGAGGCTGAGCCGTGCTGAACCGCCCTTGAGAAAGGAGGTGGTCGAGTACATGCTGGATGTGGGCTCGCACATGTGGAGTATGAGAAGAAGCAAAGCTAATTTCTTTCGAATTATGAATGTTCTGGGTGGATTAATTGCTGTTGGAAAATGGTTTGATCAGATCTGTAACTGGAAGAACCCCATCACTACTGTGCTTATCCATATCTTGTTCATAATTCTGGTTATGTACCCAGAGCTGATACTGCCTACTATTTTTCTGTACCTGTTTCTGATTGGAGTCTGGTACTACAGATGGAGGCCCAGGCATCCTCCTCACATGGACACTCGTCTCTCACATGCAGATTCTGCACATCCTGATGAACTTGATGAAGAATTTGATACTTTCCCGACTTCACGTCCTTCTGACATAGTGAGAATGAGATATGACAGATTGAGGAGTATTGCTGGGAGAATTCAGACAGTGGTTGGTGACTTGGCTACTCAAGGGGAGAGGCTGCAATCATTGTTGAGCTGGCGTGACCCGAGAGCTACAGCTCTGTTTGTGCTTTTCTGTCTGATTGCTGCTATTGTTCTGTATGTTACGCCATTCCAGATTGTGGCTCTTCTTGCTGGATTCTATGTGTTGAGGCACCCAAGATTCCGCCATAAGCTTCCATCAGTGCCACTGAACTTTTTCAGGAGGTTGCCAGCTAGGACCGACTGCATGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023052 GO:0031224 GO:0031974 GO:0031981 GO:0035556 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

775

Amino Acids

88.92

Weight (kDa)

9.14

Isoelectric Point (pI)

47.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	40 - 143	8.4e-23	C2 domain
C2	PF00168	201 - 306	1.5e-19	C2 domain
C2	PF00168	363 - 474	9.6e-21	C2 domain
Pex24p	PF06398	592 - 754	7.5e-07	Integral peroxisomal membrane peroxin
PRT_C	PF08372	619 - 774	5.1e-83	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51570 AT3G57880 AT3G57880 AT3G57880 AT3G57880
fragaria_vesca	FvH4_6g22730 FvH4_6g22730 FvH4_6g22730
malus_domestica	MD12G1061300.v1.1 MD14G1061300.v1.1
prunus_persica	Prupe.7G073400_v2.0.a1
pyrus_communis	pycom12g05420 pycom14g04960
rosa_chinensis	RchiOBHm_Chr3g0480351
rosa_laevigata	RLG00000023491
rosa_multiflora	Rmu_sc0004090.1_g000007
rosa_roxburghii	Rroxscaffold_6G00401530
rosa_rugosa	Rorug03G0182800 Rorug03G0182900 Rorug03G0182900
rosa_samantha	Rh3AG234600 Rh3BG266800 Rh3CG264400 Rh3DG260100
rosa_wichuraiana	Rw3G021050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1493
Acc36I	ACCTGC	2 cut(s)	648, 1493
AccB1I	GGYRCC	3 cut(s)	412, 1587, 2241
AccB7I	CCANNNNNTGG	2 cut(s)	600, 2209
AccII	CGCG	1 cut(s)	821
AccIII	TCCGGA	1 cut(s)	250
AciI	CCGC	2 cut(s)	1634, 2254
AclWI	GGATC	6 cut(s)	74, 283, 296, 336, 998, 1262
AcsI	RAATTY	3 cut(s)	714, 1985, 2064
AcuI	CTGAAG	3 cut(s)	39, 282, 534
AcyI	GRCGYC	1 cut(s)	413
AfaI	GTAC	8 cut(s)	490, 1204, 1403, 1517, 1661, 1841, 1874, 1898
AfiI	CCNNNNNNNGG	6 cut(s)	53, 292, 376, 600, 1086, 2209
AflIII	ACRYGT	1 cut(s)	1683
AgeI	ACCGGT	1 cut(s)	170
AgsI	TTSAA	3 cut(s)	34, 194, 1388
AhdI	GACNNNNNGTC	1 cut(s)	2007
AjiI	CACGTC	1 cut(s)	2009
AjnI	CCWGG	6 cut(s)	291, 408, 687, 1232, 1590, 1913
AleI	CACNNNNGTG	1 cut(s)	1802
Alw21I	GWGCWC	1 cut(s)	92
Alw26I	GTCTC	4 cut(s)	32, 1317, 1379, 1946
AlwI	GGATC	6 cut(s)	74, 283, 296, 336, 998, 1262
AlwNI	CAGNNNCTG	1 cut(s)	1958
Ama87I	CYCGRG	1 cut(s)	2134
Aor13HI	TCCGGA	1 cut(s)	250
AoxI	GGCC	4 cut(s)	8, 141, 1593, 1910
ApeKI	GCWGC	4 cut(s)	533, 1331, 2107, 2174
ApoI	RAATTY	3 cut(s)	714, 1985, 2064
ArsI	GACNNNNNNTTYG	2 cut(s)	557, 589
AseI	ATTAAT	1 cut(s)	1745
AsiGI	ACCGGT	1 cut(s)	170
Asp700I	GAANNNNTTC	2 cut(s)	507, 2285
AspLEI	GCGC	2 cut(s)	415, 823
AspS9I	GGNCC	3 cut(s)	283, 1911, 2307
AsuC2I	CCSGG	1 cut(s)	1336
AsuHPI	GGTGA	6 cut(s)	322, 473, 956, 1469, 1474, 2093
AsuII	TTCGAA	1 cut(s)	1720
AvaI	CYCGRG	1 cut(s)	2134
AvaII	GGWCC	2 cut(s)	283, 2307
BaeGI	GKGCMC	1 cut(s)	876
BamHI	GGATCC	1 cut(s)	288
BanI	GGYRCC	3 cut(s)	412, 1587, 2241
BanII	GRGCYC	1 cut(s)	1679
BauI	CACGAG	1 cut(s)	85
BbsI	GAAGAC	2 cut(s)	27, 1142
Bbv12I	GWGCWC	1 cut(s)	92
BbvI	GCAGC	4 cut(s)	520, 1318, 2094, 2161
BccI	CCATC	7 cut(s)	57, 478, 1139, 1447, 1802, 1899, 2275
BceAI	ACGGC	3 cut(s)	763, 775, 1608
BcgI	CGANNNNNNTGC	4 cut(s)	507, 541, 1208, 1242
BciT130I	CCWGG	6 cut(s)	293, 410, 689, 1234, 1592, 1915
BciVI	GTATCC	1 cut(s)	672
BclI	TGATCA	2 cut(s)	886, 1768
BcnI	CCSGG	1 cut(s)	1336
BcoDI	GTCTC	4 cut(s)	32, 1317, 1379, 1946
BfaI	CTAG	4 cut(s)	456, 906, 998, 2304
BfmI	CTRYAG	3 cut(s)	1036, 1900, 2142
BfoI	RGCGCY	1 cut(s)	416
BfuAI	ACCTGC	2 cut(s)	648, 1493
BfuI	GTATCC	1 cut(s)	672
BglII	AGATCT	2 cut(s)	754, 1773
BisI	GCNGC	4 cut(s)	534, 1332, 2108, 2175
BlpI	GCTNAGC	1 cut(s)	1619
BlsI	GCNGC	4 cut(s)	535, 1333, 2109, 2176
Bme1390I	CCNGG	7 cut(s)	293, 410, 689, 1234, 1336, 1592, 1915
Bme18I	GGWCC	2 cut(s)	283, 2307
BmeRI	GACNNNNNGTC	1 cut(s)	2007
BmeT110I	CYCGRG	1 cut(s)	2134
BmgBI	CACGTC	1 cut(s)	2009
BmgT120I	GGNCC	3 cut(s)	283, 1911, 2307
BmiI	GGNNCC	7 cut(s)	290, 381, 393, 414, 789, 1589, 2243
BmrFI	CCNGG	7 cut(s)	293, 410, 689, 1234, 1336, 1592, 1915
BmsI	GCATC	8 cut(s)	102, 520, 630, 779, 1116, 1153, 1497, 1927
BoxI	GACNNNNGTC	1 cut(s)	1938
BpiI	GAAGAC	2 cut(s)	27, 1142
Bpu10I	CCTNAGC	2 cut(s)	630, 1116
Bpu1102I	GCTNAGC	1 cut(s)	1619
Bpu14I	TTCGAA	1 cut(s)	1720
BpuEI	CTTGAG	6 cut(s)	326, 477, 941, 1603, 1660, 2079
BpuMI	CCSGG	1 cut(s)	1336
Bsa29I	ATCGAT	1 cut(s)	1218
BsaBI	GATNNNNATC	1 cut(s)	327
BsaHI	GRCGYC	1 cut(s)	413
BsaI	GGTCTC	1 cut(s)	32
BsaJI	CCNNGG	7 cut(s)	144, 159, 408, 688, 1232, 1335, 1913
BsaWI	WCCGGW	3 cut(s)	170, 250, 285
Bsc4I	CCNNNNNNNGG	6 cut(s)	53, 292, 376, 600, 1086, 2209
Bse118I	RCCGGY	1 cut(s)	170
Bse1I	ACTGG	2 cut(s)	972, 1787
Bse8I	GATNNNNATC	1 cut(s)	327
BseAI	TCCGGA	1 cut(s)	250
BseBI	CCWGG	6 cut(s)	293, 410, 689, 1234, 1592, 1915
BseCI	ATCGAT	1 cut(s)	1218
BseDI	CCNNGG	7 cut(s)	144, 159, 408, 688, 1232, 1335, 1913
BseJI	GATNNNNATC	1 cut(s)	327
BseLI	CCNNNNNNNGG	6 cut(s)	53, 292, 376, 600, 1086, 2209
BseMII	CTCAG	4 cut(s)	644, 1130, 1610, 1613
BseNI	ACTGG	2 cut(s)	972, 1787
BseRI	GAGGAG	4 cut(s)	800, 1335, 1914, 2062
BseSI	GKGCMC	1 cut(s)	876
BseXI	GCAGC	4 cut(s)	520, 1318, 2094, 2161
BseYI	CCCAGC	2 cut(s)	202, 2057
BsgI	GTGCAG	2 cut(s)	1415, 1944
Bsh1236I	CGCG	1 cut(s)	821
Bsh1285I	CGRYCG	1 cut(s)	575
BshFI	GGCC	4 cut(s)	10, 143, 1595, 1912
BshNI	GGYRCC	3 cut(s)	412, 1587, 2241
BshTI	ACCGGT	1 cut(s)	170
BshVI	ATCGAT	1 cut(s)	1218
BsiEI	CGRYCG	1 cut(s)	575
BsiHKAI	GWGCWC	1 cut(s)	92
BsiHKCI	CYCGRG	1 cut(s)	2134
BsiSI	CCGG	5 cut(s)	72, 171, 251, 286, 1335
BslFI	GGGAC	2 cut(s)	390, 461
BslI	CCNNNNNNNGG	6 cut(s)	53, 292, 376, 600, 1086, 2209
BsmAI	GTCTC	4 cut(s)	32, 1317, 1379, 1946
BsmBI	CGTCTC	2 cut(s)	1379, 1946
BsmFI	GGGAC	2 cut(s)	390, 461
BsmI	GAATGC	3 cut(s)	272, 523, 1117
BsnI	GGCC	4 cut(s)	10, 143, 1595, 1912
Bso31I	GGTCTC	1 cut(s)	32
BsoBI	CYCGRG	1 cut(s)	2134
Bsp119I	TTCGAA	1 cut(s)	1720
Bsp1286I	GDGCHC	3 cut(s)	92, 876, 1679
Bsp13I	TCCGGA	1 cut(s)	250
Bsp1407I	TGTACA	1 cut(s)	1401
Bsp1720I	GCTNAGC	1 cut(s)	1619
BspACI	CCGC	2 cut(s)	1634, 2254
BspANI	GGCC	4 cut(s)	10, 143, 1595, 1912
BspCNI	CTCAG	4 cut(s)	643, 1129, 1611, 1612
BspDI	ATCGAT	1 cut(s)	1218
BspEI	TCCGGA	1 cut(s)	250
BspFNI	CGCG	1 cut(s)	821
BspLI	GGNNCC	7 cut(s)	290, 381, 393, 414, 789, 1589, 2243
BspMI	ACCTGC	2 cut(s)	648, 1493
BspPI	GGATC	6 cut(s)	74, 283, 296, 336, 998, 1262
BspQI	GCTCTTC	2 cut(s)	1495, 2220
BspT104I	TTCGAA	1 cut(s)	1720
BspT107I	GGYRCC	3 cut(s)	412, 1587, 2241
BspTNI	GGTCTC	1 cut(s)	32
BsrFI	RCCGGY	1 cut(s)	170
BsrGI	TGTACA	1 cut(s)	1401
BsrI	ACTGG	2 cut(s)	972, 1787
BssAI	RCCGGY	1 cut(s)	170
BssECI	CCNNGG	7 cut(s)	144, 159, 408, 688, 1232, 1335, 1913
BssNI	GRCGYC	1 cut(s)	413
BssSI	CACGAG	1 cut(s)	85
BssT1I	CCWWGG	2 cut(s)	144, 159
Bst2BI	CACGAG	1 cut(s)	85
Bst2UI	CCWGG	6 cut(s)	293, 410, 689, 1234, 1592, 1915
Bst4CI	ACNGT	8 cut(s)	541, 1172, 1279, 1307, 1530, 1564, 1804, 2074
Bst6I	CTCTTC	3 cut(s)	1425, 1495, 2220
BstACI	GRCGYC	1 cut(s)	413
BstAPI	GCANNNNNTGC	2 cut(s)	871, 1958
BstAUI	TGTACA	1 cut(s)	1401
BstBI	TTCGAA	1 cut(s)	1720
BstC8I	GCNNGC	6 cut(s)	911, 1571, 1679, 2126, 2301, 2318
BstDEI	CTNAG	5 cut(s)	630, 1049, 1116, 1599, 1619
BstEII	GGTNACC	1 cut(s)	1007
BstENI	CCTNNNNNAGG	1 cut(s)	374
BstFNI	CGCG	1 cut(s)	821
BstH2I	RGCGCY	1 cut(s)	416
BstHHI	GCGC	2 cut(s)	415, 823
BstMAI	GTCTC	4 cut(s)	32, 1317, 1379, 1946
BstMCI	CGRYCG	1 cut(s)	575
BstMWI	GCNNNNNNNGC	6 cut(s)	503, 871, 1337, 1855, 1958, 2219
BstNI	CCWGG	6 cut(s)	293, 410, 689, 1234, 1592, 1915
BstNSI	RCATGY	4 cut(s)	1666, 1687, 1952, 2320
BstPAI	GACNNNNGTC	1 cut(s)	1938
BstPI	GGTNACC	1 cut(s)	1007
BstSCI	CCNGG	7 cut(s)	291, 408, 687, 1232, 1334, 1590, 1913
BstSFI	CTRYAG	3 cut(s)	1036, 1900, 2142
BstSLI	GKGCMC	1 cut(s)	876
BstUI	CGCG	1 cut(s)	821
BstV1I	GCAGC	4 cut(s)	520, 1318, 2094, 2161
BstV2I	GAAGAC	2 cut(s)	27, 1142
BstX2I	RGATCY	6 cut(s)	66, 288, 328, 754, 990, 1773
BstXI	CCANNNNNNTGG	1 cut(s)	56
BstYI	RGATCY	6 cut(s)	66, 288, 328, 754, 990, 1773
Bsu15I	ATCGAT	1 cut(s)	1218
BsuI	GTATCC	1 cut(s)	672
BsuRI	GGCC	4 cut(s)	10, 143, 1595, 1912
BsuTUI	ATCGAT	1 cut(s)	1218
BtrI	CACGTC	1 cut(s)	2009
BtsI	GCAGTG	1 cut(s)	1048
BtsIMutI	CAGTG	6 cut(s)	1048, 1526, 1617, 2079, 2276, 2277
BveI	ACCTGC	2 cut(s)	648, 1493
Cac8I	GCNNGC	6 cut(s)	911, 1571, 1679, 2126, 2301, 2318
CaiI	CAGNNNCTG	1 cut(s)	1958
CfoI	GCGC	2 cut(s)	415, 823
Cfr10I	RCCGGY	1 cut(s)	170
Cfr13I	GGNCC	3 cut(s)	283, 1911, 2307
ClaI	ATCGAT	1 cut(s)	1218
Csp6I	GTAC	8 cut(s)	489, 1203, 1402, 1516, 1660, 1840, 1873, 1897
CspAI	ACCGGT	1 cut(s)	170
CspCI	CAANNNNNGTGG	2 cut(s)	1585, 1620
CviQI	GTAC	8 cut(s)	489, 1203, 1402, 1516, 1660, 1840, 1873, 1897
DdeI	CTNAG	5 cut(s)	630, 1049, 1116, 1599, 1619
DinI	GGCGCC	1 cut(s)	414
DriI	GACNNNNNGTC	1 cut(s)	2007
Eam1104I	CTCTTC	3 cut(s)	1425, 1495, 2220
Eam1105I	GACNNNNNGTC	1 cut(s)	2007
EarI	CTCTTC	3 cut(s)	1425, 1495, 2220
EciI	GGCGGA	1 cut(s)	2243
Eco130I	CCWWGG	2 cut(s)	144, 159
Eco147I	AGGCCT	1 cut(s)	10
Eco24I	GRGCYC	1 cut(s)	1679
Eco31I	GGTCTC	1 cut(s)	32
Eco47I	GGWCC	2 cut(s)	283, 2307
Eco57I	CTGAAG	3 cut(s)	39, 282, 534
Eco88I	CYCGRG	1 cut(s)	2134
Eco91I	GGTNACC	1 cut(s)	1007
EcoNI	CCTNNNNNAGG	1 cut(s)	374
EcoO65I	GGTNACC	1 cut(s)	1007
EcoRI	GAATTC	1 cut(s)	2064
EcoRII	CCWGG	6 cut(s)	291, 408, 687, 1232, 1590, 1913
EcoT14I	CCWWGG	2 cut(s)	144, 159
EcoT22I	ATGCAT	2 cut(s)	1512, 1545
EcoT38I	GRGCYC	1 cut(s)	1679
EgeI	GGCGCC	1 cut(s)	414
EheI	GGCGCC	1 cut(s)	414
ErhI	CCWWGG	2 cut(s)	144, 159
Esp3I	CGTCTC	2 cut(s)	1379, 1946
FaqI	GGGAC	2 cut(s)	390, 461
FauNDI	CATATG	3 cut(s)	984, 1467, 1512
FbaI	TGATCA	2 cut(s)	886, 1768
Fnu4HI	GCNGC	4 cut(s)	534, 1332, 2108, 2175
FriOI	GRGCYC	1 cut(s)	1679
Fsp4HI	GCNGC	4 cut(s)	534, 1332, 2108, 2175
FspBI	CTAG	4 cut(s)	456, 906, 998, 2304
GlaI	GCGC	2 cut(s)	414, 822
GluI	GCNGC	4 cut(s)	534, 1332, 2108, 2175
GsaI	CCCAGC	2 cut(s)	206, 2061
HaeII	RGCGCY	1 cut(s)	416
HaeIII	GGCC	4 cut(s)	10, 143, 1595, 1912
HapII	CCGG	5 cut(s)	72, 171, 251, 286, 1335
HhaI	GCGC	2 cut(s)	415, 823
Hin1I	GRCGYC	1 cut(s)	413
Hin6I	GCGC	2 cut(s)	413, 821
HinP1I	GCGC	2 cut(s)	413, 821
HincII	GTYRAC	1 cut(s)	1029
HindII	GTYRAC	1 cut(s)	1029
HindIII	AAGCTT	1 cut(s)	2261
HpaII	CCGG	5 cut(s)	72, 171, 251, 286, 1335
HphI	GGTGA	6 cut(s)	322, 473, 956, 1469, 1474, 2093
Hpy166II	GTNNAC	5 cut(s)	901, 1029, 1402, 1404, 1482
Hpy8I	GTNNAC	5 cut(s)	901, 1029, 1402, 1404, 1482
HpyCH4III	ACNGT	8 cut(s)	541, 1172, 1279, 1307, 1530, 1564, 1804, 2074
HpyCH4IV	ACGT	1 cut(s)	2008
HpyF10VI	GCNNNNNNNGC	6 cut(s)	503, 871, 1337, 1855, 1958, 2219
HpyF3I	CTNAG	5 cut(s)	630, 1049, 1116, 1599, 1619
HpySE526I	ACGT	1 cut(s)	2008
Hsp92I	GRCGYC	1 cut(s)	413
HspAI	GCGC	2 cut(s)	413, 821
KasI	GGCGCC	1 cut(s)	412
Kpn2I	TCCGGA	1 cut(s)	250
Ksp22I	TGATCA	2 cut(s)	886, 1768
LguI	GCTCTTC	2 cut(s)	1495, 2220
LmnI	GCTCC	3 cut(s)	548, 787, 1234
Lsp1109I	GCAGC	4 cut(s)	520, 1318, 2094, 2161
LweI	GCATC	8 cut(s)	102, 520, 630, 779, 1116, 1153, 1497, 1927
MaeI	CTAG	4 cut(s)	456, 906, 998, 2304
MaeII	ACGT	1 cut(s)	2008
MaeIII	GTNAC	8 cut(s)	166, 179, 1007, 1530, 1778, 2081, 2129, 2191
MfeI	CAATTG	1 cut(s)	1287
MflI	RGATCY	6 cut(s)	66, 288, 328, 754, 990, 1773
MhlI	GDGCHC	3 cut(s)	92, 876, 1679
MluCI	AATT	9 cut(s)	714, 1287, 1353, 1711, 1722, 1746, 1827, 1985, 2064
Mly113I	GGCGCC	1 cut(s)	413
MlyI	GAGTC	2 cut(s)	1034, 1899
MmeI	TCCRAC	1 cut(s)	1735
Mph1103I	ATGCAT	2 cut(s)	1512, 1545
MroI	TCCGGA	1 cut(s)	250
MroXI	GAANNNNTTC	2 cut(s)	507, 2285
MseI	TTAA	5 cut(s)	198, 615, 800, 963, 1745
MslI	CAYNNNNRTG	6 cut(s)	54, 528, 1314, 1437, 1802, 1968
MspI	CCGG	5 cut(s)	72, 171, 251, 286, 1335
MspR9I	CCNGG	7 cut(s)	293, 410, 689, 1234, 1336, 1592, 1915
MunI	CAATTG	1 cut(s)	1287
Mva1269I	GAATGC	3 cut(s)	272, 523, 1117
MvaI	CCWGG	6 cut(s)	293, 410, 689, 1234, 1592, 1915
MvnI	CGCG	1 cut(s)	821
MwoI	GCNNNNNNNGC	6 cut(s)	503, 871, 1337, 1855, 1958, 2219
NarI	GGCGCC	1 cut(s)	413
NciI	CCSGG	1 cut(s)	1336
NdeI	CATATG	3 cut(s)	984, 1467, 1512
NlaIV	GGNNCC	7 cut(s)	290, 381, 393, 414, 789, 1589, 2243
NmeAIII	GCCGAG	1 cut(s)	205
NmuCI	GTSAC	3 cut(s)	179, 2081, 2129
NsiI	ATGCAT	2 cut(s)	1512, 1545
NspI	RCATGY	4 cut(s)	1666, 1687, 1952, 2320
NspV	TTCGAA	1 cut(s)	1720
OliI	CACNNNNGTG	1 cut(s)	1802
PaeI	GCATGC	1 cut(s)	2320
PaqCI	CACCTGC	1 cut(s)	1493
PceI	AGGCCT	1 cut(s)	10
PciI	ACATGT	1 cut(s)	1683
PciSI	GCTCTTC	2 cut(s)	1495, 2220
PctI	GAATGC	3 cut(s)	272, 523, 1117
PdmI	GAANNNNTTC	2 cut(s)	507, 2285
PfeI	GAWTC	9 cut(s)	259, 816, 979, 1104, 1346, 1369, 1955, 2226, 2250
PflMI	CCANNNNNTGG	2 cut(s)	600, 2209
PinAI	ACCGGT	1 cut(s)	170
PkrI	GCNGC	4 cut(s)	535, 1333, 2109, 2176
PleI	GAGTC	2 cut(s)	1033, 1898
PluTI	GGCGCC	1 cut(s)	416
PpsI	GAGTC	2 cut(s)	1033, 1898
PscI	ACATGT	1 cut(s)	1683
PshAI	GACNNNNGTC	1 cut(s)	1938
PshBI	ATTAAT	1 cut(s)	1745
Psp6I	CCWGG	6 cut(s)	291, 408, 687, 1232, 1590, 1913
PspEI	GGTNACC	1 cut(s)	1007
PspFI	CCCAGC	2 cut(s)	202, 2057
PspGI	CCWGG	6 cut(s)	291, 408, 687, 1232, 1590, 1913
PspN4I	GGNNCC	7 cut(s)	290, 381, 393, 414, 789, 1589, 2243
PspPI	GGNCC	3 cut(s)	283, 1911, 2307
PstNI	CAGNNNCTG	1 cut(s)	1958
PsuI	RGATCY	6 cut(s)	66, 288, 328, 754, 990, 1773
RsaI	GTAC	8 cut(s)	490, 1204, 1403, 1517, 1661, 1841, 1874, 1898
RsaNI	GTAC	8 cut(s)	489, 1203, 1402, 1516, 1660, 1840, 1873, 1897
RseI	CAYNNNNRTG	6 cut(s)	54, 528, 1314, 1437, 1802, 1968
SapI	GCTCTTC	2 cut(s)	1495, 2220
SaqAI	TTAA	5 cut(s)	198, 615, 800, 963, 1745
SatI	GCNGC	4 cut(s)	534, 1332, 2108, 2175
Sau96I	GGNCC	3 cut(s)	283, 1911, 2307
SchI	GAGTC	2 cut(s)	1034, 1899
ScrFI	CCNGG	7 cut(s)	293, 410, 689, 1234, 1336, 1592, 1915
SduI	GDGCHC	3 cut(s)	92, 876, 1679
SfaNI	GCATC	8 cut(s)	102, 520, 630, 779, 1116, 1153, 1497, 1927
SfcI	CTRYAG	3 cut(s)	1036, 1900, 2142
SfoI	GGCGCC	1 cut(s)	414
SfuI	TTCGAA	1 cut(s)	1720
SinI	GGWCC	2 cut(s)	283, 2307
SmiMI	CAYNNNNRTG	6 cut(s)	54, 528, 1314, 1437, 1802, 1968
SmlI	CTYRAG	6 cut(s)	305, 492, 920, 1582, 1639, 2094
SmoI	CTYRAG	6 cut(s)	305, 492, 920, 1582, 1639, 2094
SphI	GCATGC	1 cut(s)	2320
Sse9I	AATT	9 cut(s)	714, 1287, 1353, 1711, 1722, 1746, 1827, 1985, 2064
SseBI	AGGCCT	1 cut(s)	10
SsiI	CCGC	2 cut(s)	1634, 2254
SspDI	GGCGCC	1 cut(s)	412
SspI	AATATT	1 cut(s)	568
SspMI	CTAG	4 cut(s)	456, 906, 998, 2304
StuI	AGGCCT	1 cut(s)	10
StyD4I	CCNGG	7 cut(s)	291, 408, 687, 1232, 1334, 1590, 1913
StyI	CCWWGG	2 cut(s)	144, 159
TaaI	ACNGT	8 cut(s)	541, 1172, 1279, 1307, 1530, 1564, 1804, 2074
TaiI	ACGT	1 cut(s)	2011
TaqI	TCGA	6 cut(s)	278, 575, 712, 1218, 1656, 1720
TaqII	GACCGA	2 cut(s)	561, 2324
TasI	AATT	9 cut(s)	714, 1287, 1353, 1711, 1722, 1746, 1827, 1985, 2064
TatI	WGTACW	3 cut(s)	1401, 1515, 1659
TfiI	GAWTC	9 cut(s)	259, 816, 979, 1104, 1346, 1369, 1955, 2226, 2250
Tru1I	TTAA	5 cut(s)	198, 615, 800, 963, 1745
Tru9I	TTAA	5 cut(s)	198, 615, 800, 963, 1745
TscAI	CASTG	6 cut(s)	1048, 1533, 1617, 2079, 2277, 2283
TseFI	GTSAC	3 cut(s)	179, 2081, 2129
TseI	GCWGC	4 cut(s)	533, 1331, 2107, 2174
Tsp45I	GTSAC	3 cut(s)	179, 2081, 2129
TspRI	CASTG	6 cut(s)	1048, 1533, 1617, 2079, 2277, 2283
Van91I	CCANNNNNTGG	2 cut(s)	600, 2209
VpaK11BI	GGWCC	2 cut(s)	283, 2307
VspI	ATTAAT	1 cut(s)	1745
XagI	CCTNNNNNAGG	1 cut(s)	374
XapI	RAATTY	3 cut(s)	714, 1985, 2064
XbaI	TCTAGA	1 cut(s)	997
XceI	RCATGY	4 cut(s)	1666, 1687, 1952, 2320
XmnI	GAANNNNTTC	2 cut(s)	507, 2285
XspI	CTAG	4 cut(s)	456, 906, 998, 2304
Zsp2I	ATGCAT	2 cut(s)	1512, 1545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.