Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006985

Physical Location & Seq

Genomic Coordinates Forward (+)

26119423 .. 26123423

Gene Structure 4001 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ44537

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGCAGAGGCCTCCACCGGAAGACTTTGCTTTGAAGGAGACCAAACCCCATCTCGGTGGGGGGAGGATCTCCGGCGACAAGCACACGAGCACCTATGACCTCGTTGAGCAGATGCAGTACCTCTATGTTCGGGTTGTAAAGGCCAAGGACTTGCCTTCCAAGGATGTGACCGGCAGCTGTGACCCTTATGTTGAAGTTAAGCTGGGAAACTACAAGGGTACAACTCGGCATTTTGAGAAGAAGACCCATCCGGAGTGGAACCAGGTGTTTGCATTCTCGAAGGACCGGATCCAGGCTTCGGCCCTTGAGGTGATTGTGAAGGACAAGGATCTTATGAAGGATGACTTCATTGGCCACGTTATTTTTGACCTGAATGAGGTTCCGAAAAGGGTTCCACCTGATAGTCCCCTGGCGCCACAATGGTATAGACTGGAGGATAGGAAGGGGGAAAAGGCTAGGGGTGAGCTGATGTTGGCTGTTTGGATGGGCACTCAAGCTGATGAAGCATTTCCTGAAGCATGGCATTCCGATGCTGCCACAGTTAGTGGGGCTGACAGTCTGTCAAACATTCGATCAAAGGTGTATCTCTCTCCCAAGCTATGGTATTTGAGGGTTAATGTGATTGAGGCTCAGGATTTGATGCCGAGCGATAAAGGCAGGTATCCGGAAGTTTATGTGAAGGCTATCCTGGGAAATCAGGCTTTGAGAACTCGAATTTCACAAAGCAGGAGTATAAATCCCATGTGGAATGAAGATTTAATGTTTGTAGCATCAGAGCCTTTTGAGGAGCCATTGATTTTAAGTGTGGAAGATAGAGTTGCGCCAAACAAGGATGAAGTTCTGGGGAGGTGTGCTATACCTTTGCAGTATGTGGCCCGAAGGTATGATCATAAACCTGTGAACACTAGCTGGCACAATCTTGAGAAGCACATTATTGTAGAAGGGGAAAAGAAGAAGGATATTAAGTTTGCAAGCAGGATTCATATGAGGATCTGTCTAGAAGGTGGCTACCATGTGCTTGATGAGTCAACACACTATAGTAGTGATCTTAGACCGACAGCCAAACCGTTGTGGAAGTCCAGCATTGGGGTTCTGGAAGTGGGAATCCTGAATGCTCAGGGGTTGATGCCAATGAAGACAATAGATGGTAGGGGAACAACAGATGCTTACTGCGTTGCAAAATATGGGCAGAAGTGGGTTCGGACAAGAACCATTATCGATAGCTTTGCTCCCAGGTGGAATGAGCAATACACTTGGGAAGTTTTTGATCCTTGCACTGTCATTACAATTGGGGTCTTTGATAACTGTCATTTGCATGGAGGAGATAAGGCTGCCGCGGCAAAGGATTCACGAATCGGGAAGGTCAGGATTCGTCTCTCTACTCTTGAAACTGATCGGGTTTACACACACTCTTATCCTCTTCTGGTTCTGCACCCCAGTGGTGTTAAGAAGATGGGTGAAATTCATATGGCTGTGAGGTTCACCTGCTCTTCTTTGCTGAACATGATGCATATGTACTCGCAACCACTGTTGCCCAAAATGCACTATCTTCATCCATTAACTGTAAGCCAGCTTGATAGCTTGAGGCACCAGGCCACTCTGATTGTATCAGTGAGGCTGAGCCGTGCTGAACCGCCCTTGAGAAAGGAGGTGGTCGAGTATATGCTGGATGTGGGTTCCCACATGTGGAGTATGAGAAGAAGCAAAGCTAATTTCTTCAGGATTATGAGCGTTCTTGGTGGATTAATTGCTGTTGGAAAATGGTTTGATCAGATCTGTAATTGGAAAAACCCCATCACTACTGTGCTTATTCATATCCTGTTCATAATTCTGGTCATGTACCCAGAGCTGATATTACCTACAATTTTTCTCTACCTCTTTTTGATTGGAGTCTGGTACTACAGATGGAGGCCAAGGCATCCTCCTCACATGGACACTCGTCTCTCTCACGCAGATTCTGCACATCCTGATGAACTTGATGAAGAATTTGATACCTTCCCAACTTCACGACCTTCTGACATAGTGAGGATGAGATATGACAGATTGAGGAGTATTGCTGGGAGGATCCAGACAGTGGTTGGTGACCTGGCTACTCAAGGGGAGAGGCTGCAATCATTGTTGAGCTGGCGAGACCCGAGAGCTACAGCTCTGTTTGTGCTTTTCTGTCTGATTGCTGCCATTGTTCTGTATGTTACCCCATTCCAGGTTGTGGCACTTCTCGCTGGATTCTATGTGTTAAGGCACCCAAGATTCCGCCATAAGCTTCCATCAGTGCCGTTGAATTTCTTCAGGAGGTTGCCGGCTAGGACCGACTGCATGCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023052 GO:0031224 GO:0031974 GO:0031981 GO:0035556 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

774

Amino Acids

88.93

Weight (kDa)

9.11

Isoelectric Point (pI)

48.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	40 - 143	2.6e-23	C2 domain
C2	PF00168	201 - 306	5.3e-20	C2 domain
C2	PF00168	363 - 474	2.8e-20	C2 domain
Pex24p	PF06398	591 - 754	3.1e-07	Integral peroxisomal membrane peroxin
PRT_C	PF08372	619 - 774	4e-83	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006985)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51570 AT3G57880 AT3G57880 AT3G57880 AT3G57880
fragaria_vesca	FvH4_6g22730 FvH4_6g22730 FvH4_6g22730
malus_domestica	MD12G1061300.v1.1 MD14G1061300.v1.1
prunus_persica	Prupe.7G073400_v2.0.a1
pyrus_communis	pycom12g05420 pycom14g04960
rosa_chinensis	RchiOBHm_Chr3g0480351
rosa_laevigata	RLG00000023491
rosa_multiflora	Rmu_sc0004090.1_g000007
rosa_roxburghii	Rroxscaffold_6G00401530
rosa_rugosa	Rorug03G0182800 Rorug03G0182900 Rorug03G0182900
rosa_samantha	Rh3AG234600 Rh3BG266800 Rh3CG264400 Rh3DG260100
rosa_wichuraiana	Rw3G021050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1493
Acc36I	ACCTGC	2 cut(s)	648, 1493
AccB1I	GGYRCC	3 cut(s)	412, 1587, 2241
AccB7I	CCANNNNNTGG	3 cut(s)	600, 2074, 2209
AccII	CGCG	1 cut(s)	1337
AccIII	TCCGGA	2 cut(s)	250, 664
AciI	CCGC	4 cut(s)	1335, 1337, 1634, 2254
AclWI	GGATC	8 cut(s)	74, 283, 296, 336, 998, 1262, 2059, 2072
AcoI	YGGCCR	1 cut(s)	352
AcsI	RAATTY	4 cut(s)	714, 1461, 1985, 2281
AcuI	CTGAAG	3 cut(s)	534, 1702, 2272
AcyI	GRCGYC	1 cut(s)	413
AfaI	GTAC	5 cut(s)	119, 220, 1517, 1841, 1898
AflIII	ACRYGT	1 cut(s)	1683
AgsI	TTSAA	4 cut(s)	34, 194, 1388, 2281
AhdI	GACNNNNNGTC	1 cut(s)	559
AjnI	CCWGG	8 cut(s)	261, 291, 408, 687, 1232, 1590, 2085, 2202
AleI	CACNNNNGTG	2 cut(s)	1437, 1802
Alw21I	GWGCWC	1 cut(s)	92
Alw26I	GTCTC	4 cut(s)	32, 1379, 1946, 2124
AlwI	GGATC	8 cut(s)	74, 283, 296, 336, 998, 1262, 2059, 2072
AlwNI	CAGNNNCTG	1 cut(s)	1958
Ama87I	CYCGRG	1 cut(s)	2134
Aor13HI	TCCGGA	2 cut(s)	250, 664
AoxI	GGCC	7 cut(s)	8, 141, 300, 352, 873, 1593, 1910
ApeKI	GCWGC	5 cut(s)	174, 533, 1331, 2107, 2174
ApoI	RAATTY	4 cut(s)	714, 1461, 1985, 2281
AseI	ATTAAT	1 cut(s)	1745
Asp700I	GAANNNNTTC	2 cut(s)	507, 2285
AspLEI	GCGC	2 cut(s)	415, 823
AspS9I	GGNCC	4 cut(s)	283, 301, 874, 2307
AsuHPI	GGTGA	5 cut(s)	322, 473, 1469, 1474, 2093
AvaI	CYCGRG	1 cut(s)	2134
AvaII	GGWCC	2 cut(s)	283, 2307
BaeGI	GKGCMC	1 cut(s)	491
BalI	TGGCCA	1 cut(s)	354
BamHI	GGATCC	2 cut(s)	288, 2064
BanI	GGYRCC	3 cut(s)	412, 1587, 2241
BauI	CACGAG	1 cut(s)	85
BbsI	GAAGAC	3 cut(s)	27, 248, 1142
Bbv12I	GWGCWC	1 cut(s)	92
BbvI	GCAGC	5 cut(s)	186, 520, 1318, 2094, 2161
BccI	CCATC	8 cut(s)	57, 255, 478, 1139, 1447, 1802, 1899, 2275
BceAI	ACGGC	2 cut(s)	1608, 2260
BcgI	CGANNNNNNTGC	2 cut(s)	1208, 1242
BciT130I	CCWGG	8 cut(s)	263, 293, 410, 689, 1234, 1592, 2087, 2204
BciVI	GTATCC	1 cut(s)	672
BclI	TGATCA	2 cut(s)	886, 1768
BcoDI	GTCTC	4 cut(s)	32, 1379, 1946, 2124
BfaI	CTAG	4 cut(s)	456, 906, 998, 2304
BfmI	CTRYAG	3 cut(s)	1036, 1900, 2142
BfoI	RGCGCY	1 cut(s)	416
BfuAI	ACCTGC	2 cut(s)	648, 1493
BfuI	GTATCC	1 cut(s)	672
BglII	AGATCT	1 cut(s)	1773
BisI	GCNGC	7 cut(s)	175, 534, 1332, 1335, 1338, 2108, 2175
BlpI	GCTNAGC	1 cut(s)	1619
BlsI	GCNGC	7 cut(s)	176, 535, 1333, 1336, 1339, 2109, 2176
Bme1390I	CCNGG	8 cut(s)	263, 293, 410, 689, 1234, 1592, 2087, 2204
Bme18I	GGWCC	2 cut(s)	283, 2307
BmeRI	GACNNNNNGTC	1 cut(s)	559
BmeT110I	CYCGRG	1 cut(s)	2134
BmgT120I	GGNCC	4 cut(s)	283, 301, 874, 2307
BmrFI	CCNGG	8 cut(s)	263, 293, 410, 689, 1234, 1592, 2087, 2204
BmrI	ACTGGG	1 cut(s)	1431
BmsI	GCATC	8 cut(s)	102, 520, 630, 779, 1116, 1153, 1497, 1927
BmuI	ACTGGG	1 cut(s)	1431
BoxI	GACNNNNGTC	1 cut(s)	1938
BpiI	GAAGAC	3 cut(s)	27, 248, 1142
BpmI	CTGGAG	1 cut(s)	452
Bpu10I	CCTNAGC	2 cut(s)	630, 1116
Bpu1102I	GCTNAGC	1 cut(s)	1619
BpuEI	CTTGAG	6 cut(s)	326, 477, 941, 1603, 1660, 2079
Bsa29I	ATCGAT	1 cut(s)	1218
BsaHI	GRCGYC	1 cut(s)	413
BsaI	GGTCTC	2 cut(s)	32, 2124
BsaJI	CCNNGG	7 cut(s)	144, 159, 408, 688, 1232, 1335, 1913
BsaWI	WCCGGW	4 cut(s)	16, 250, 285, 664
Bse118I	RCCGGY	2 cut(s)	170, 2299
Bse1I	ACTGG	2 cut(s)	435, 1437
BseAI	TCCGGA	2 cut(s)	250, 664
BseBI	CCWGG	8 cut(s)	263, 293, 410, 689, 1234, 1592, 2087, 2204
BseCI	ATCGAT	1 cut(s)	1218
BseDI	CCNNGG	7 cut(s)	144, 159, 408, 688, 1232, 1335, 1913
BseMII	CTCAG	3 cut(s)	644, 1130, 1610
BseNI	ACTGG	2 cut(s)	435, 1437
BseRI	GAGGAG	4 cut(s)	800, 1335, 1914, 2062
BseSI	GKGCMC	1 cut(s)	491
BseXI	GCAGC	5 cut(s)	186, 520, 1318, 2094, 2161
BseYI	CCCAGC	2 cut(s)	202, 2057
BsgI	GTGCAG	2 cut(s)	1415, 1944
Bsh1236I	CGCG	1 cut(s)	1337
BshFI	GGCC	7 cut(s)	10, 143, 302, 354, 875, 1595, 1912
BshNI	GGYRCC	3 cut(s)	412, 1587, 2241
BshVI	ATCGAT	1 cut(s)	1218
BsiHKAI	GWGCWC	1 cut(s)	92
BsiHKCI	CYCGRG	1 cut(s)	2134
BsiSI	CCGG	7 cut(s)	17, 72, 171, 251, 286, 665, 2300
BslFI	GGGAC	1 cut(s)	390
BsmAI	GTCTC	4 cut(s)	32, 1379, 1946, 2124
BsmBI	CGTCTC	2 cut(s)	1379, 1946
BsmFI	GGGAC	1 cut(s)	390
BsmI	GAATGC	3 cut(s)	272, 523, 1117
BsnI	GGCC	7 cut(s)	10, 143, 302, 354, 875, 1595, 1912
Bso31I	GGTCTC	2 cut(s)	32, 2124
BsoBI	CYCGRG	1 cut(s)	2134
Bsp1286I	GDGCHC	2 cut(s)	92, 491
Bsp13I	TCCGGA	2 cut(s)	250, 664
Bsp1720I	GCTNAGC	1 cut(s)	1619
BspACI	CCGC	4 cut(s)	1335, 1337, 1634, 2254
BspANI	GGCC	7 cut(s)	10, 143, 302, 354, 875, 1595, 1912
BspCNI	CTCAG	3 cut(s)	643, 1129, 1611
BspDI	ATCGAT	1 cut(s)	1218
BspEI	TCCGGA	2 cut(s)	250, 664
BspFNI	CGCG	1 cut(s)	1337
BspMI	ACCTGC	2 cut(s)	648, 1493
BspPI	GGATC	8 cut(s)	74, 283, 296, 336, 998, 1262, 2059, 2072
BspQI	GCTCTTC	1 cut(s)	1495
BspT107I	GGYRCC	3 cut(s)	412, 1587, 2241
BspTNI	GGTCTC	2 cut(s)	32, 2124
BsrFI	RCCGGY	2 cut(s)	170, 2299
BsrI	ACTGG	2 cut(s)	435, 1437
BssAI	RCCGGY	2 cut(s)	170, 2299
BssECI	CCNNGG	7 cut(s)	144, 159, 408, 688, 1232, 1335, 1913
BssNI	GRCGYC	1 cut(s)	413
BssSI	CACGAG	1 cut(s)	85
BssT1I	CCWWGG	3 cut(s)	144, 159, 1913
Bst2BI	CACGAG	1 cut(s)	85
Bst2UI	CCWGG	8 cut(s)	263, 293, 410, 689, 1234, 1592, 2087, 2204
Bst4CI	ACNGT	9 cut(s)	541, 557, 1068, 1279, 1307, 1530, 1564, 1804, 2074
Bst6I	CTCTTC	2 cut(s)	1425, 1495
BstACI	GRCGYC	1 cut(s)	413
BstAPI	GCANNNNNTGC	1 cut(s)	1958
BstC8I	GCNNGC	6 cut(s)	911, 973, 1571, 2126, 2301, 2318
BstDEI	CTNAG	4 cut(s)	630, 1049, 1116, 1619
BstDSI	CCRYGG	1 cut(s)	1335
BstEII	GGTNACC	1 cut(s)	2081
BstENI	CCTNNNNNAGG	1 cut(s)	374
BstFNI	CGCG	1 cut(s)	1337
BstH2I	RGCGCY	1 cut(s)	416
BstHHI	GCGC	2 cut(s)	415, 823
BstMAI	GTCTC	4 cut(s)	32, 1379, 1946, 2124
BstMWI	GCNNNNNNNGC	6 cut(s)	503, 654, 1337, 1540, 1958, 2219
BstNI	CCWGG	8 cut(s)	263, 293, 410, 689, 1234, 1592, 2087, 2204
BstNSI	RCATGY	2 cut(s)	1687, 2320
BstPAI	GACNNNNGTC	1 cut(s)	1938
BstPI	GGTNACC	1 cut(s)	2081
BstSCI	CCNGG	8 cut(s)	261, 291, 408, 687, 1232, 1590, 2085, 2202
BstSFI	CTRYAG	3 cut(s)	1036, 1900, 2142
BstSLI	GKGCMC	1 cut(s)	491
BstUI	CGCG	1 cut(s)	1337
BstV1I	GCAGC	5 cut(s)	186, 520, 1318, 2094, 2161
BstV2I	GAAGAC	3 cut(s)	27, 248, 1142
BstX2I	RGATCY	6 cut(s)	66, 288, 328, 990, 1773, 2064
BstXI	CCANNNNNNTGG	1 cut(s)	56
BstYI	RGATCY	6 cut(s)	66, 288, 328, 990, 1773, 2064
Bsu15I	ATCGAT	1 cut(s)	1218
BsuI	GTATCC	1 cut(s)	672
BsuRI	GGCC	7 cut(s)	10, 143, 302, 354, 875, 1595, 1912
BsuTUI	ATCGAT	1 cut(s)	1218
BtgI	CCRYGG	1 cut(s)	1335
BtsIMutI	CAGTG	6 cut(s)	1275, 1444, 1526, 1617, 2079, 2277
BveI	ACCTGC	2 cut(s)	648, 1493
Cac8I	GCNNGC	6 cut(s)	911, 973, 1571, 2126, 2301, 2318
CaiI	CAGNNNCTG	1 cut(s)	1958
CfoI	GCGC	2 cut(s)	415, 823
Cfr10I	RCCGGY	2 cut(s)	170, 2299
Cfr13I	GGNCC	4 cut(s)	283, 301, 874, 2307
Cfr42I	CCGCGG	1 cut(s)	1338
ClaI	ATCGAT	1 cut(s)	1218
CsiI	ACCWGGT	1 cut(s)	261
Csp6I	GTAC	5 cut(s)	118, 219, 1516, 1840, 1897
CspCI	CAANNNNNGTGG	2 cut(s)	1585, 1620
CviAII	CATG	9 cut(s)	519, 742, 1013, 1316, 1504, 1684, 1837, 1930, 2317
CviQI	GTAC	5 cut(s)	118, 219, 1516, 1840, 1897
DdeI	CTNAG	4 cut(s)	630, 1049, 1116, 1619
DinI	GGCGCC	1 cut(s)	414
DriI	GACNNNNNGTC	1 cut(s)	559
EaeI	YGGCCR	1 cut(s)	352
Eam1104I	CTCTTC	2 cut(s)	1425, 1495
Eam1105I	GACNNNNNGTC	1 cut(s)	559
EarI	CTCTTC	2 cut(s)	1425, 1495
EciI	GGCGGA	1 cut(s)	2243
Eco130I	CCWWGG	3 cut(s)	144, 159, 1913
Eco147I	AGGCCT	1 cut(s)	10
Eco31I	GGTCTC	2 cut(s)	32, 2124
Eco47I	GGWCC	2 cut(s)	283, 2307
Eco57I	CTGAAG	3 cut(s)	534, 1702, 2272
Eco88I	CYCGRG	1 cut(s)	2134
Eco91I	GGTNACC	1 cut(s)	2081
EcoNI	CCTNNNNNAGG	1 cut(s)	374
EcoO65I	GGTNACC	1 cut(s)	2081
EcoRII	CCWGG	8 cut(s)	261, 291, 408, 687, 1232, 1590, 2085, 2202
EcoT14I	CCWWGG	3 cut(s)	144, 159, 1913
EcoT22I	ATGCAT	1 cut(s)	1512
EgeI	GGCGCC	1 cut(s)	414
EheI	GGCGCC	1 cut(s)	414
ErhI	CCWWGG	3 cut(s)	144, 159, 1913
Esp3I	CGTCTC	2 cut(s)	1379, 1946
FaeI	CATG	9 cut(s)	522, 745, 1016, 1319, 1507, 1687, 1840, 1933, 2320
FalI	AAGNNNNNCTT	2 cut(s)	329, 361
FaqI	GGGAC	1 cut(s)	390
FatI	CATG	9 cut(s)	518, 741, 1012, 1315, 1503, 1683, 1836, 1929, 2316
FauNDI	CATATG	3 cut(s)	984, 1467, 1512
FbaI	TGATCA	2 cut(s)	886, 1768
Fnu4HI	GCNGC	7 cut(s)	175, 534, 1332, 1335, 1338, 2108, 2175
Fsp4HI	GCNGC	7 cut(s)	175, 534, 1332, 1335, 1338, 2108, 2175
FspBI	CTAG	4 cut(s)	456, 906, 998, 2304
GlaI	GCGC	2 cut(s)	414, 822
GluI	GCNGC	7 cut(s)	175, 534, 1332, 1335, 1338, 2108, 2175
GsaI	CCCAGC	2 cut(s)	206, 2061
GsuI	CTGGAG	1 cut(s)	452
HaeII	RGCGCY	1 cut(s)	416
HaeIII	GGCC	7 cut(s)	10, 143, 302, 354, 875, 1595, 1912
HapII	CCGG	7 cut(s)	17, 72, 171, 251, 286, 665, 2300
HhaI	GCGC	2 cut(s)	415, 823
Hin1I	GRCGYC	1 cut(s)	413
Hin1II	CATG	9 cut(s)	522, 745, 1016, 1319, 1507, 1687, 1840, 1933, 2320
Hin6I	GCGC	2 cut(s)	413, 821
HinP1I	GCGC	2 cut(s)	413, 821
HincII	GTYRAC	1 cut(s)	1029
HindII	GTYRAC	1 cut(s)	1029
HindIII	AAGCTT	1 cut(s)	2261
HpaII	CCGG	7 cut(s)	17, 72, 171, 251, 286, 665, 2300
HphI	GGTGA	5 cut(s)	322, 473, 1469, 1474, 2093
Hpy166II	GTNNAC	4 cut(s)	901, 1029, 1402, 1482
Hpy188I	TCNGA	8 cut(s)	384, 529, 775, 1203, 1602, 1773, 2017, 2169
Hpy8I	GTNNAC	4 cut(s)	901, 1029, 1402, 1482
HpyCH4III	ACNGT	9 cut(s)	541, 557, 1068, 1279, 1307, 1530, 1564, 1804, 2074
HpyCH4IV	ACGT	1 cut(s)	357
HpyF10VI	GCNNNNNNNGC	6 cut(s)	503, 654, 1337, 1540, 1958, 2219
HpyF3I	CTNAG	4 cut(s)	630, 1049, 1116, 1619
HpySE526I	ACGT	1 cut(s)	357
Hsp92I	GRCGYC	1 cut(s)	413
Hsp92II	CATG	9 cut(s)	522, 745, 1016, 1319, 1507, 1687, 1840, 1933, 2320
HspAI	GCGC	2 cut(s)	413, 821
KasI	GGCGCC	1 cut(s)	412
Kpn2I	TCCGGA	2 cut(s)	250, 664
KroI	GCCGGC	1 cut(s)	2299
KroNI	GCCGGC	1 cut(s)	2301
Ksp22I	TGATCA	2 cut(s)	886, 1768
KspI	CCGCGG	1 cut(s)	1338
LguI	GCTCTTC	1 cut(s)	1495
LmnI	GCTCC	2 cut(s)	787, 1234
Lsp1109I	GCAGC	5 cut(s)	186, 520, 1318, 2094, 2161
LweI	GCATC	8 cut(s)	102, 520, 630, 779, 1116, 1153, 1497, 1927
MabI	ACCWGGT	1 cut(s)	261
MaeI	CTAG	4 cut(s)	456, 906, 998, 2304
MaeII	ACGT	1 cut(s)	357
MaeIII	GTNAC	4 cut(s)	166, 179, 2081, 2191
MfeI	CAATTG	1 cut(s)	1287
MflI	RGATCY	6 cut(s)	66, 288, 328, 990, 1773, 2064
MhlI	GDGCHC	2 cut(s)	92, 491
MlsI	TGGCCA	1 cut(s)	354
MluNI	TGGCCA	1 cut(s)	354
Mly113I	GGCGCC	1 cut(s)	413
MlyI	GAGTC	2 cut(s)	1034, 1899
MmeI	TCCRAC	1 cut(s)	1735
Mox20I	TGGCCA	1 cut(s)	354
Mph1103I	ATGCAT	1 cut(s)	1512
MroI	TCCGGA	2 cut(s)	250, 664
MroNI	GCCGGC	1 cut(s)	2299
MroXI	GAANNNNTTC	2 cut(s)	507, 2285
MscI	TGGCCA	1 cut(s)	354
MseI	TTAA	9 cut(s)	198, 615, 758, 800, 963, 1446, 1559, 1745, 2237
MslI	CAYNNNNRTG	6 cut(s)	54, 528, 1314, 1437, 1802, 1968
Msp20I	TGGCCA	1 cut(s)	354
MspA1I	CMGCKG	2 cut(s)	177, 1337
MspI	CCGG	7 cut(s)	17, 72, 171, 251, 286, 665, 2300
MspR9I	CCNGG	8 cut(s)	263, 293, 410, 689, 1234, 1592, 2087, 2204
MunI	CAATTG	1 cut(s)	1287
Mva1269I	GAATGC	3 cut(s)	272, 523, 1117
MvaI	CCWGG	8 cut(s)	263, 293, 410, 689, 1234, 1592, 2087, 2204
MvnI	CGCG	1 cut(s)	1337
MwoI	GCNNNNNNNGC	6 cut(s)	503, 654, 1337, 1540, 1958, 2219
NaeI	GCCGGC	1 cut(s)	2301
NarI	GGCGCC	1 cut(s)	413
NdeI	CATATG	3 cut(s)	984, 1467, 1512
NgoMIV	GCCGGC	1 cut(s)	2299
NlaIII	CATG	9 cut(s)	522, 745, 1016, 1319, 1507, 1687, 1840, 1933, 2320
NmeAIII	GCCGAG	2 cut(s)	205, 669
NmuCI	GTSAC	3 cut(s)	166, 179, 2081
NsiI	ATGCAT	1 cut(s)	1512
NspI	RCATGY	2 cut(s)	1687, 2320
OliI	CACNNNNGTG	2 cut(s)	1437, 1802
PaeI	GCATGC	1 cut(s)	2320
PaqCI	CACCTGC	1 cut(s)	1493
PceI	AGGCCT	1 cut(s)	10
PciI	ACATGT	1 cut(s)	1683
PciSI	GCTCTTC	1 cut(s)	1495
PctI	GAATGC	3 cut(s)	272, 523, 1117
PdiI	GCCGGC	1 cut(s)	2301
PdmI	GAANNNNTTC	2 cut(s)	507, 2285
PfeI	GAWTC	8 cut(s)	979, 1104, 1346, 1353, 1369, 1955, 2226, 2250
PflMI	CCANNNNNTGG	3 cut(s)	600, 2074, 2209
PkrI	GCNGC	7 cut(s)	176, 535, 1333, 1336, 1339, 2109, 2176
PleI	GAGTC	2 cut(s)	1033, 1898
PluTI	GGCGCC	1 cut(s)	416
PpsI	GAGTC	2 cut(s)	1033, 1898
PscI	ACATGT	1 cut(s)	1683
PshAI	GACNNNNGTC	1 cut(s)	1938
PshBI	ATTAAT	1 cut(s)	1745
Psp6I	CCWGG	8 cut(s)	261, 291, 408, 687, 1232, 1590, 2085, 2202
PspEI	GGTNACC	1 cut(s)	2081
PspFI	CCCAGC	2 cut(s)	202, 2057
PspGI	CCWGG	8 cut(s)	261, 291, 408, 687, 1232, 1590, 2085, 2202
PspPI	GGNCC	4 cut(s)	283, 301, 874, 2307
PstNI	CAGNNNCTG	1 cut(s)	1958
PsuI	RGATCY	6 cut(s)	66, 288, 328, 990, 1773, 2064
PvuII	CAGCTG	1 cut(s)	177
RsaI	GTAC	5 cut(s)	119, 220, 1517, 1841, 1898
RsaNI	GTAC	5 cut(s)	118, 219, 1516, 1840, 1897
RseI	CAYNNNNRTG	6 cut(s)	54, 528, 1314, 1437, 1802, 1968
SacII	CCGCGG	1 cut(s)	1338
SapI	GCTCTTC	1 cut(s)	1495
SaqAI	TTAA	9 cut(s)	198, 615, 758, 800, 963, 1446, 1559, 1745, 2237
SatI	GCNGC	7 cut(s)	175, 534, 1332, 1335, 1338, 2108, 2175
Sau96I	GGNCC	4 cut(s)	283, 301, 874, 2307
SchI	GAGTC	2 cut(s)	1034, 1899
ScrFI	CCNGG	8 cut(s)	263, 293, 410, 689, 1234, 1592, 2087, 2204
SduI	GDGCHC	2 cut(s)	92, 491
SexAI	ACCWGGT	1 cut(s)	261
SfaNI	GCATC	8 cut(s)	102, 520, 630, 779, 1116, 1153, 1497, 1927
SfcI	CTRYAG	3 cut(s)	1036, 1900, 2142
SfoI	GGCGCC	1 cut(s)	414
Sfr303I	CCGCGG	1 cut(s)	1338
SgrBI	CCGCGG	1 cut(s)	1338
SinI	GGWCC	2 cut(s)	283, 2307
SmiMI	CAYNNNNRTG	6 cut(s)	54, 528, 1314, 1437, 1802, 1968
SmlI	CTYRAG	6 cut(s)	305, 492, 920, 1582, 1639, 2094
SmoI	CTYRAG	6 cut(s)	305, 492, 920, 1582, 1639, 2094
SphI	GCATGC	1 cut(s)	2320
SseBI	AGGCCT	1 cut(s)	10
SsiI	CCGC	4 cut(s)	1335, 1337, 1634, 2254
SspDI	GGCGCC	1 cut(s)	412
SspMI	CTAG	4 cut(s)	456, 906, 998, 2304
StuI	AGGCCT	1 cut(s)	10
StyD4I	CCNGG	8 cut(s)	261, 291, 408, 687, 1232, 1590, 2085, 2202
StyI	CCWWGG	3 cut(s)	144, 159, 1913
TaaI	ACNGT	9 cut(s)	541, 557, 1068, 1279, 1307, 1530, 1564, 1804, 2074
TaiI	ACGT	1 cut(s)	360
TaqI	TCGA	5 cut(s)	278, 571, 712, 1218, 1656
TaqII	GACCGA	2 cut(s)	1069, 2324
TatI	WGTACW	1 cut(s)	1515
TauI	GCSGC	2 cut(s)	1337, 1340
TfiI	GAWTC	8 cut(s)	979, 1104, 1346, 1353, 1369, 1955, 2226, 2250
Tru1I	TTAA	9 cut(s)	198, 615, 758, 800, 963, 1446, 1559, 1745, 2237
Tru9I	TTAA	9 cut(s)	198, 615, 758, 800, 963, 1446, 1559, 1745, 2237
TscAI	CASTG	6 cut(s)	1282, 1444, 1533, 1617, 2079, 2277
TseFI	GTSAC	3 cut(s)	166, 179, 2081
TseI	GCWGC	5 cut(s)	174, 533, 1331, 2107, 2174
Tsp45I	GTSAC	3 cut(s)	166, 179, 2081
TspRI	CASTG	6 cut(s)	1282, 1444, 1533, 1617, 2079, 2277
Van91I	CCANNNNNTGG	3 cut(s)	600, 2074, 2209
VpaK11BI	GGWCC	2 cut(s)	283, 2307
VspI	ATTAAT	1 cut(s)	1745
XagI	CCTNNNNNAGG	1 cut(s)	374
XapI	RAATTY	4 cut(s)	714, 1461, 1985, 2281
XbaI	TCTAGA	1 cut(s)	997
XceI	RCATGY	2 cut(s)	1687, 2320
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2075
XmnI	GAANNNNTTC	2 cut(s)	507, 2285
XspI	CTAG	4 cut(s)	456, 906, 998, 2304
Zsp2I	ATGCAT	1 cut(s)	1512

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.