Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0011643

Physical Location & Seq

Genomic Coordinates Reverse (-)

16406646 .. 16409843

Gene Structure 3198 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g22780.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2391 bp

ATGAAATCACAAGCTGGCCCTAATCCCCAAGAAGACTACAAACTGAAGGACACGAAACCCCAGCTCGGGGAAAGATGGCCACATGGAGGAGTGCGTGGTGGAGGAGGGTGGATTAGCAACGAAAGAGCTACGAGCACTTACGACCTTGTTGAGCAGATGTTCTATCTCTATGTTAGAGTTGTTAAAGCAAAAGATCTGCCAACAAACCCTGTAACAGGAAGTTGTGACCCTTACGTAGAAGTGAAGCTCGGAAATTACAAGGGCAAAACACAGCACTTTGAGAAGAAAACAAACCCCGAATGGAAGCAGGTGTTTGCATTCTCAAAAGATAAGATTCAATCTTCCATACTTGAAGTTTATGTCAGAGAAAAAGACATGGTAGCAAGAGATGACTATGTAGGGAAAGTGGTGTTTGACATGAATGAAGTGCCAACTAGAGTTCCACCGGATAGCCCTTTGGCGCCTCAGTGGTATAGATTAGAACACCGGAGAAGTGATACTAAGGTTAGAGGAGAGGTTATGCTTGCAGTATGGATGGGCACACAGGCTGATGAAGCCTTCCCAGAAGCTTGGCACTCAGATGCTGCTTCAGTCCATGGAGAAGGAGTCTTCAGCATTCGTTCCAAAGTTTACGTTTCACCAAAACTTTGGTATCTCAGAGTTAACGTAATTGAAGCTCAAGATGTAGAACCACATGACAAAAGCCAACCACCACAAGCTTTTGTGAAGGCTCATGTTGGGAATCAGACACTCAAGACACAGGTATGTCCAACCAAAACCCCTAATCCGATGTGGAATGAAGACTTGATCTTCGTAGCAGCAGAGCCTTTCGAAGAACTGCTTGTACTTACAGTTGAAAACAAAGTCAGCTCTGCAAAAGAAGTACAAGTGGGGAAAATAAGACTGCCACTGACCATGTTCGAAAGGCGCTTGGATCACAGGCCAGTTCATTCTCGCTGGTTCACCCTCGAAAGATTTGGTTTCGGTGCATTGGAGGGAGACAAAAGGCATGAGCTCAAGTTTTCAACCAGAGTCCATCTAAGAGTCTGCCTTGAAGGTGCTTACCATGTTCTAGATGAATCGACCTTGTACATAAGTGATGTGAGGCCTACTGCTAGGCAGCTATGGAAACAGCCAATTGGGATTCTTGAAGTGGGGATTTTAAGTGCTCAAGGGATTCTTCCAATGAAGACAAAGGATGGTAAAGCAACAACTGATGCCTACTGCGTAGCCAAGTATGGGCAGAAATGGGTGAGGACCAGAACAATCATTGAAAGCTTCAGTCCGAAATGGAATGAGCAATACACATGGGAGGTCTATGACCCTTGCACCGTGATCACACTAGGAGTCTTTGACAACTGCCACCTGGGTGGAAATGAGAAACCAACATCCGGCGGTGGAGCTAAAAATGACTCAAGAATTGGCAAGGTAAGAATCCGGCTATCAACTCTTGAAATGGATAGGATTTACACCAACTCTTATCCACTTCTTGTTCTTCACCCATCTGGGTTGAAAAAGATGGGGGAACTGCAACTGGCATTAAGGTTTACCTGTCTCTCATTAGCAAATATAATCTACCTCTATGGCCATCCCTTGCTTCCCAAAATGCATTACCTGCATCCATTCACTGTGAACCAGTTAGATAGTCTGAGATATCAGGCAATGAACATTGTAGCTGTGAGACTTGGCAGAGCTGAGCCACCACTAAGAAAAGAGGTGGTGGAGTACATGCTTGATGTAGATTCCCACATGTGGAGCATGAGAAGAAGCAAAGCCAACTTTTTCAGAATTGTTTCACTCTTCTCTGGCCTCATCTCCATGAGCAGGTGGTTTGGCGAAGTTCGTCACTGGAAAAACCCAATCACTACAGTTCTAGTTCATGTTCTGTTTTTCCTACTGATCTGCTACCCGGAATTGATCCTCCCTACGGTCTTCCTTTACATGTTTCTGATCGGAATATGGAATTTCCGTTTCCGGCCAAGAGTGCCTCCTAGTATGGACACTAAACTTTCATGGGCAGAAGCTGTTCACCCAGATGAAATGGATGAAGAGTTTGACACCTTTCCTACATCGAAGGCGCAAGATGTGGTGCGAATGAGGTATGACAGACTACGAAGTGTAGCGGGAAGAATTCAAACGGTGGTTGGAGACATAGCAACTCAGGGGGAGAGATTCCAGGCAGTGCTCAGTTGGAGAGACCCAAGAGCAAGCAGCTTGTTCGTATTTTTGTGCCTTATTATTGCTGTAGTGCTCTATGTGACACCCTTCAAGATGCTTGCTCTGATCTCAGGCATAGTTTGGCTACGCCACCCTAGATTCCGAAGCAAGCTACCATCAGTGATGAGCAATTTCTTCAGAAGATTGCCATCTCGTGCTGACAGCATGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009314 GO:0009416 GO:0009506 GO:0009510 GO:0009511 GO:0009628 GO:0009648 GO:0009791 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0022414 GO:0023052 GO:0030054 GO:0031224 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0033036 GO:0034613 GO:0035556 GO:0042886 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045184 GO:0046872 GO:0048518 GO:0048571 GO:0048573 GO:0048574 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051179 GO:0051234 GO:0051239 GO:0051240 GO:0051641 GO:0051716 GO:0055044 GO:0061458 GO:0065007 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

797

Amino Acids

91.54

Weight (kDa)

9.31

Isoelectric Point (pI)

42.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	55 - 160	4.7e-21	C2 domain
C2	PF00168	217 - 323	3.2e-17	C2 domain
C2	PF00168	381 - 496	1.3e-18	C2 domain
PRT_C	PF08372	641 - 796	1.6e-78	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06850
fragaria_vesca	FvH4_6g22780 FvH4_6g22780
malus_domestica	MD12G1062100.v1.1 MD14G1056400.v1.1
prunus_persica	Prupe.7G072800_v2.0.a1
pyrus_communis	pycom12g05490 pycom14g04620
rosa_chinensis	RchiOBHm_Chr3g0480381
rosa_laevigata	RLG00000023487
rosa_multiflora	Rmu_sc0002205.1_g000002 Rmu_sc0003742.1_g000015
rosa_roxburghii	Rroxscaffold_6G00401430
rosa_rugosa	Rorug03G0183500
rosa_samantha	Rh3AG235000 Rh3BG267500 Rh3CG264800 Rh3DG260700
rosa_wichuraiana	Rw3G021090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	298, 1815
Acc36I	ACCTGC	3 cut(s)	298, 1623, 1815
AccB1I	GGYRCC	1 cut(s)	460
AciI	CCGC	2 cut(s)	1395, 2123
AclWI	GGATC	2 cut(s)	942, 1912
AcoI	YGGCCR	3 cut(s)	77, 1585, 1976
AcsI	RAATTY	2 cut(s)	1963, 2130
AcuI	CTGAAG	5 cut(s)	65, 573, 595, 1264, 2338
AcyI	GRCGYC	1 cut(s)	461
AfaI	GTAC	4 cut(s)	846, 885, 1091, 1727
AflIII	ACRYGT	2 cut(s)	1749, 1941
AjnI	CCWGG	2 cut(s)	1365, 2175
AleI	CACNNNNGTG	1 cut(s)	1368
Alw21I	GWGCWC	5 cut(s)	137, 1017, 1171, 2187, 2253
Alw26I	GTCTC	5 cut(s)	993, 1559, 1675, 2142, 2190
AlwI	GGATC	2 cut(s)	942, 1912
AlwNI	CAGNNNCTG	2 cut(s)	584, 2024
Ama87I	CYCGRG	1 cut(s)	65
AoxI	GGCC	7 cut(s)	16, 77, 941, 1106, 1585, 1807, 1976
ApeKI	GCWGC	4 cut(s)	584, 818, 1120, 2211
ApoI	RAATTY	2 cut(s)	1963, 2130
ArsI	GACNNNNNNTTYG	2 cut(s)	794, 826
Asp700I	GAANNNNTTC	2 cut(s)	1792, 2025
AspLEI	GCGC	3 cut(s)	463, 930, 2080
AspS9I	GGNCC	2 cut(s)	17, 1257
AsuC2I	CCSGG	1 cut(s)	1910
AsuHPI	GGTGA	5 cut(s)	630, 955, 1264, 1490, 2021
AsuII	TTCGAA	2 cut(s)	831, 921
AvaI	CYCGRG	1 cut(s)	65
AvaII	GGWCC	1 cut(s)	1257
BaeGI	GKGCMC	1 cut(s)	542
BaeI	ACNNNNGTAYC	4 cut(s)	489, 522, 635, 668
BalI	TGGCCA	2 cut(s)	79, 1587
BanI	GGYRCC	1 cut(s)	460
BanII	GRGCYC	1 cut(s)	1017
BauI	CACGAG	1 cut(s)	2370
BbsI	GAAGAC	5 cut(s)	39, 601, 807, 1196, 1924
Bbv12I	GWGCWC	5 cut(s)	137, 1017, 1171, 2187, 2253
BbvI	GCAGC	4 cut(s)	571, 830, 1132, 2223
BccI	CCATC	9 cut(s)	69, 529, 1044, 1193, 1510, 1513, 1596, 2341, 2374
BcgI	CGANNNNNNTGC	2 cut(s)	2200, 2234
BciT130I	CCWGG	2 cut(s)	1367, 2177
BclI	TGATCA	1 cut(s)	1335
BcnI	CCSGG	1 cut(s)	1910
BcoDI	GTCTC	5 cut(s)	993, 1559, 1675, 2142, 2190
BfaI	CTAG	7 cut(s)	435, 1073, 1116, 1343, 1874, 1992, 2313
BfmI	CTRYAG	2 cut(s)	1866, 2244
BfoI	RGCGCY	2 cut(s)	464, 931
BfuAI	ACCTGC	3 cut(s)	298, 1623, 1815
BglII	AGATCT	1 cut(s)	193
BisI	GCNGC	4 cut(s)	585, 819, 1121, 2212
BlpI	GCTNAGC	1 cut(s)	1695
BlsI	GCNGC	4 cut(s)	586, 820, 1122, 2213
Bme1390I	CCNGG	3 cut(s)	1367, 1910, 2177
Bme18I	GGWCC	1 cut(s)	1257
BmeT110I	CYCGRG	1 cut(s)	65
BmgT120I	GGNCC	2 cut(s)	17, 1257
BmiI	GGNNCC	1 cut(s)	462
BmrFI	CCNGG	3 cut(s)	1367, 1910, 2177
BmsI	GCATC	4 cut(s)	571, 1207, 1627, 2262
BpiI	GAAGAC	5 cut(s)	39, 601, 807, 1196, 1924
Bpu1102I	GCTNAGC	1 cut(s)	1695
Bpu14I	TTCGAA	2 cut(s)	831, 921
BpuEI	CTTGAG	5 cut(s)	663, 737, 1001, 1155, 1399
BpuMI	CCSGG	1 cut(s)	1910
BsaAI	YACGTR	1 cut(s)	235
BsaBI	GATNNNNATC	1 cut(s)	2365
BsaHI	GRCGYC	1 cut(s)	461
BsaI	GGTCTC	1 cut(s)	2190
BsaJI	CCNNGG	2 cut(s)	595, 1366
BsaWI	WCCGGW	2 cut(s)	445, 486
BsaXI	ACNNNNNCTCC	2 cut(s)	591, 621
Bse1I	ACTGG	4 cut(s)	944, 1539, 1636, 1853
Bse3DI	GCAATG	1 cut(s)	1668
Bse8I	GATNNNNATC	1 cut(s)	2365
BseBI	CCWGG	2 cut(s)	1367, 2177
BseDI	CCNNGG	2 cut(s)	595, 1366
BseGI	GGATG	6 cut(s)	540, 1204, 1388, 1588, 1618, 2050
BseJI	GATNNNNATC	1 cut(s)	2365
BseMI	GCAATG	1 cut(s)	1668
BseMII	CTCAG	8 cut(s)	479, 591, 670, 1640, 1686, 2174, 2200, 2301
BseNI	ACTGG	4 cut(s)	944, 1539, 1636, 1853
BseRI	GAGGAG	3 cut(s)	102, 117, 525
BseSI	GKGCMC	1 cut(s)	542
BseXI	GCAGC	4 cut(s)	571, 830, 1132, 2223
BseYI	CCCAGC	1 cut(s)	60
BshFI	GGCC	7 cut(s)	18, 79, 943, 1108, 1587, 1809, 1978
BshNI	GGYRCC	1 cut(s)	460
BsiHKAI	GWGCWC	5 cut(s)	137, 1017, 1171, 2187, 2253
BsiHKCI	CYCGRG	1 cut(s)	65
BsiSI	CCGG	6 cut(s)	446, 487, 1392, 1438, 1910, 1975
BsmAI	GTCTC	5 cut(s)	993, 1559, 1675, 2142, 2190
BsmI	GAATGC	2 cut(s)	317, 615
BsnI	GGCC	7 cut(s)	18, 79, 943, 1108, 1587, 1809, 1978
Bso31I	GGTCTC	1 cut(s)	2190
BsoBI	CYCGRG	1 cut(s)	65
Bsp119I	TTCGAA	2 cut(s)	831, 921
Bsp1286I	GDGCHC	6 cut(s)	137, 542, 1017, 1171, 2187, 2253
Bsp1407I	TGTACA	1 cut(s)	1089
Bsp143I	GATC	8 cut(s)	193, 807, 934, 1335, 1899, 1917, 1950, 2283
Bsp1720I	GCTNAGC	1 cut(s)	1695
Bsp19I	CCATGG	1 cut(s)	595
BspACI	CCGC	2 cut(s)	1395, 2123
BspANI	GGCC	7 cut(s)	18, 79, 943, 1108, 1587, 1809, 1978
BspCNI	CTCAG	8 cut(s)	478, 590, 669, 1641, 1687, 2173, 2199, 2300
BspLI	GGNNCC	1 cut(s)	462
BspMI	ACCTGC	3 cut(s)	298, 1623, 1815
BspPI	GGATC	2 cut(s)	942, 1912
BspT104I	TTCGAA	2 cut(s)	831, 921
BspT107I	GGYRCC	1 cut(s)	460
BspTNI	GGTCTC	1 cut(s)	2190
BsrDI	GCAATG	1 cut(s)	1668
BsrGI	TGTACA	1 cut(s)	1089
BsrI	ACTGG	4 cut(s)	944, 1539, 1636, 1853
BssECI	CCNNGG	2 cut(s)	595, 1366
BssMI	GATC	8 cut(s)	193, 807, 934, 1335, 1899, 1917, 1950, 2283
BssNI	GRCGYC	1 cut(s)	461
BssSI	CACGAG	1 cut(s)	2370
BssT1I	CCWWGG	1 cut(s)	595
Bst2BI	CACGAG	1 cut(s)	2370
Bst2UI	CCWGG	2 cut(s)	1367, 2177
Bst4CI	ACNGT	6 cut(s)	853, 1333, 1630, 1870, 1930, 2140
Bst6I	CTCTTC	2 cut(s)	1805, 2043
BstACI	GRCGYC	1 cut(s)	461
BstAPI	GCANNNNNTGC	1 cut(s)	1615
BstAUI	TGTACA	1 cut(s)	1089
BstBAI	YACGTR	1 cut(s)	235
BstBI	TTCGAA	2 cut(s)	831, 921
BstC8I	GCNNGC	6 cut(s)	16, 525, 2209, 2277, 2327, 2384
BstDSI	CCRYGG	1 cut(s)	595
BstENI	CCTNNNNNAGG	1 cut(s)	213
BstF5I	GGATG	6 cut(s)	540, 1204, 1388, 1588, 1618, 2050
BstH2I	RGCGCY	2 cut(s)	464, 931
BstHHI	GCGC	3 cut(s)	463, 930, 2080
BstKTI	GATC	8 cut(s)	196, 810, 937, 1338, 1902, 1920, 1953, 2286
BstMAI	GTCTC	5 cut(s)	993, 1559, 1675, 2142, 2190
BstMBI	GATC	8 cut(s)	193, 807, 934, 1335, 1899, 1917, 1950, 2283
BstMWI	GCNNNNNNNGC	3 cut(s)	554, 1615, 1984
BstNI	CCWGG	2 cut(s)	1367, 2177
BstNSI	RCATGY	4 cut(s)	1732, 1753, 1945, 2386
BstSCI	CCNGG	3 cut(s)	1365, 1908, 2175
BstSFI	CTRYAG	2 cut(s)	1866, 2244
BstSLI	GKGCMC	1 cut(s)	542
BstSNI	TACGTA	1 cut(s)	235
BstV1I	GCAGC	4 cut(s)	571, 830, 1132, 2223
BstV2I	GAAGAC	5 cut(s)	39, 601, 807, 1196, 1924
BstX2I	RGATCY	1 cut(s)	193
BstXI	CCANNNNNNTGG	3 cut(s)	570, 648, 1370
BstYI	RGATCY	1 cut(s)	193
BsuRI	GGCC	7 cut(s)	18, 79, 943, 1108, 1587, 1809, 1978
BtgI	CCRYGG	1 cut(s)	595
BtsCI	GGATG	6 cut(s)	540, 1204, 1388, 1588, 1618, 2050
BtsI	GCAGTG	1 cut(s)	2187
BtsIMutI	CAGTG	6 cut(s)	473, 908, 1626, 1846, 2187, 2343
BveI	ACCTGC	3 cut(s)	298, 1623, 1815
Cac8I	GCNNGC	6 cut(s)	16, 525, 2209, 2277, 2327, 2384
CaiI	CAGNNNCTG	2 cut(s)	584, 2024
CfoI	GCGC	3 cut(s)	463, 930, 2080
Cfr13I	GGNCC	2 cut(s)	17, 1257
Csp6I	GTAC	4 cut(s)	845, 884, 1090, 1726
CviQI	GTAC	4 cut(s)	845, 884, 1090, 1726
DinI	GGCGCC	1 cut(s)	462
DpnI	GATC	8 cut(s)	195, 809, 936, 1337, 1901, 1919, 1952, 2285
DpnII	GATC	8 cut(s)	193, 807, 934, 1335, 1899, 1917, 1950, 2283
EaeI	YGGCCR	3 cut(s)	77, 1585, 1976
Eam1104I	CTCTTC	2 cut(s)	1805, 2043
EarI	CTCTTC	2 cut(s)	1805, 2043
Ecl136II	GAGCTC	1 cut(s)	1015
Eco105I	TACGTA	1 cut(s)	235
Eco130I	CCWWGG	1 cut(s)	595
Eco147I	AGGCCT	1 cut(s)	1108
Eco24I	GRGCYC	1 cut(s)	1017
Eco31I	GGTCTC	1 cut(s)	2190
Eco32I	GATATC	1 cut(s)	1655
Eco47I	GGWCC	1 cut(s)	1257
Eco53kI	GAGCTC	1 cut(s)	1015
Eco57I	CTGAAG	5 cut(s)	65, 573, 595, 1264, 2338
Eco88I	CYCGRG	1 cut(s)	65
EcoICRI	GAGCTC	1 cut(s)	1015
EcoNI	CCTNNNNNAGG	1 cut(s)	213
EcoRI	GAATTC	1 cut(s)	2130
EcoRII	CCWGG	2 cut(s)	1365, 2175
EcoRV	GATATC	1 cut(s)	1655
EcoT14I	CCWWGG	1 cut(s)	595
EcoT22I	ATGCAT	1 cut(s)	1611
EcoT38I	GRGCYC	1 cut(s)	1017
EgeI	GGCGCC	1 cut(s)	462
EheI	GGCGCC	1 cut(s)	462
ErhI	CCWWGG	1 cut(s)	595
FalI	AAGNNNNNCTT	4 cut(s)	825, 857, 1164, 1196
FauI	CCCGC	1 cut(s)	2116
FbaI	TGATCA	1 cut(s)	1335
Fnu4HI	GCNGC	4 cut(s)	585, 819, 1121, 2212
FokI	GGATG	6 cut(s)	547, 1211, 1375, 1575, 1605, 2057
FriOI	GRGCYC	1 cut(s)	1017
Fsp4HI	GCNGC	4 cut(s)	585, 819, 1121, 2212
FspBI	CTAG	7 cut(s)	435, 1073, 1116, 1343, 1874, 1992, 2313
GlaI	GCGC	3 cut(s)	462, 929, 2079
GluI	GCNGC	4 cut(s)	585, 819, 1121, 2212
GsaI	CCCAGC	1 cut(s)	64
HaeII	RGCGCY	2 cut(s)	464, 931
HaeIII	GGCC	7 cut(s)	18, 79, 943, 1108, 1587, 1809, 1978
HapII	CCGG	6 cut(s)	446, 487, 1392, 1438, 1910, 1975
HhaI	GCGC	3 cut(s)	463, 930, 2080
Hin1I	GRCGYC	1 cut(s)	461
Hin6I	GCGC	3 cut(s)	461, 928, 2078
HinP1I	GCGC	3 cut(s)	461, 928, 2078
HincII	GTYRAC	1 cut(s)	664
HindII	GTYRAC	1 cut(s)	664
HindIII	AAGCTT	3 cut(s)	567, 717, 1276
HpaI	GTTAAC	1 cut(s)	664
HpaII	CCGG	6 cut(s)	446, 487, 1392, 1438, 1910, 1975
HphI	GGTGA	5 cut(s)	630, 955, 1264, 1490, 2021
Hpy166II	GTNNAC	6 cut(s)	631, 664, 963, 1548, 1633, 2029
Hpy188III	TCNNGA	7 cut(s)	680, 754, 1073, 1148, 1416, 1451, 2269
Hpy8I	GTNNAC	6 cut(s)	631, 664, 963, 1548, 1633, 2029
HpyAV	CCTTC	7 cut(s)	40, 568, 596, 721, 1049, 2068, 2275
HpyCH4III	ACNGT	6 cut(s)	853, 1333, 1630, 1870, 1930, 2140
HpyCH4IV	ACGT	3 cut(s)	234, 633, 666
HpyCH4V	TGCA	8 cut(s)	317, 527, 875, 989, 1329, 1531, 1609, 1618
HpyF10VI	GCNNNNNNNGC	3 cut(s)	554, 1615, 1984
HpySE526I	ACGT	3 cut(s)	234, 633, 666
Hsp92I	GRCGYC	1 cut(s)	461
HspAI	GCGC	3 cut(s)	461, 928, 2078
KasI	GGCGCC	1 cut(s)	460
Ksp22I	TGATCA	1 cut(s)	1335
KspAI	GTTAAC	1 cut(s)	664
Kzo9I	GATC	8 cut(s)	193, 807, 934, 1335, 1899, 1917, 1950, 2283
LmnI	GCTCC	2 cut(s)	1400, 1755
Lsp1109I	GCAGC	4 cut(s)	571, 830, 1132, 2223
LweI	GCATC	4 cut(s)	571, 1207, 1627, 2262
MaeI	CTAG	7 cut(s)	435, 1073, 1116, 1343, 1874, 1992, 2313
MaeII	ACGT	3 cut(s)	234, 633, 666
MaeIII	GTNAC	4 cut(s)	211, 224, 1844, 2257
MalI	GATC	8 cut(s)	195, 809, 936, 1337, 1901, 1919, 1952, 2285
MboI	GATC	8 cut(s)	193, 807, 934, 1335, 1899, 1917, 1950, 2283
MfeI	CAATTG	1 cut(s)	1137
MflI	RGATCY	1 cut(s)	193
MhlI	GDGCHC	6 cut(s)	137, 542, 1017, 1171, 2187, 2253
MlsI	TGGCCA	2 cut(s)	79, 1587
MluCI	AATT	9 cut(s)	253, 669, 1137, 1419, 1788, 1913, 1963, 2130, 2347
MluNI	TGGCCA	2 cut(s)	79, 1587
Mly113I	GGCGCC	1 cut(s)	461
MlyI	GAGTC	5 cut(s)	615, 1041, 1053, 1356, 1406
MmeI	TCCRAC	3 cut(s)	794, 2125, 2171
Mox20I	TGGCCA	2 cut(s)	79, 1587
Mph1103I	ATGCAT	1 cut(s)	1611
MroXI	GAANNNNTTC	2 cut(s)	1792, 2025
MscI	TGGCCA	2 cut(s)	79, 1587
MseI	TTAA	4 cut(s)	183, 663, 1163, 1541
MslI	CAYNNNNRTG	5 cut(s)	579, 763, 1368, 1817, 2034
Msp20I	TGGCCA	2 cut(s)	79, 1587
MspI	CCGG	6 cut(s)	446, 487, 1392, 1438, 1910, 1975
MspR9I	CCNGG	3 cut(s)	1367, 1910, 2177
MunI	CAATTG	1 cut(s)	1137
Mva1269I	GAATGC	2 cut(s)	317, 615
MvaI	CCWGG	2 cut(s)	1367, 2177
MwoI	GCNNNNNNNGC	3 cut(s)	554, 1615, 1984
NarI	GGCGCC	1 cut(s)	461
NciI	CCSGG	1 cut(s)	1910
NcoI	CCATGG	1 cut(s)	595
NdeII	GATC	8 cut(s)	193, 807, 934, 1335, 1899, 1917, 1950, 2283
NlaIV	GGNNCC	1 cut(s)	462
NmuCI	GTSAC	3 cut(s)	224, 1844, 2257
NsiI	ATGCAT	1 cut(s)	1611
NspI	RCATGY	4 cut(s)	1732, 1753, 1945, 2386
NspV	TTCGAA	2 cut(s)	831, 921
OliI	CACNNNNGTG	1 cut(s)	1368
PaeI	GCATGC	1 cut(s)	2386
PaqCI	CACCTGC	2 cut(s)	298, 1815
PceI	AGGCCT	1 cut(s)	1108
PciI	ACATGT	2 cut(s)	1749, 1941
PctI	GAATGC	2 cut(s)	317, 615
PdmI	GAANNNNTTC	2 cut(s)	1792, 2025
PfeI	GAWTC	9 cut(s)	334, 742, 1079, 1144, 1177, 1434, 1742, 2172, 2316
PkrI	GCNGC	4 cut(s)	586, 820, 1122, 2213
PleI	GAGTC	5 cut(s)	614, 1040, 1052, 1355, 1406
PluTI	GGCGCC	1 cut(s)	464
PpsI	GAGTC	5 cut(s)	614, 1040, 1052, 1355, 1406
Ppu21I	YACGTR	1 cut(s)	235
PscI	ACATGT	2 cut(s)	1749, 1941
Psp124BI	GAGCTC	1 cut(s)	1017
Psp6I	CCWGG	2 cut(s)	1365, 2175
PspFI	CCCAGC	1 cut(s)	60
PspGI	CCWGG	2 cut(s)	1365, 2175
PspN4I	GGNNCC	1 cut(s)	462
PspPI	GGNCC	2 cut(s)	17, 1257
PsrI	GAACNNNNNNTAC	2 cut(s)	828, 860
PstNI	CAGNNNCTG	2 cut(s)	584, 2024
PsuI	RGATCY	1 cut(s)	193
RsaI	GTAC	4 cut(s)	846, 885, 1091, 1727
RsaNI	GTAC	4 cut(s)	845, 884, 1090, 1726
RseI	CAYNNNNRTG	5 cut(s)	579, 763, 1368, 1817, 2034
SacI	GAGCTC	1 cut(s)	1017
SaqAI	TTAA	4 cut(s)	183, 663, 1163, 1541
SatI	GCNGC	4 cut(s)	585, 819, 1121, 2212
Sau3AI	GATC	8 cut(s)	193, 807, 934, 1335, 1899, 1917, 1950, 2283
Sau96I	GGNCC	2 cut(s)	17, 1257
SchI	GAGTC	5 cut(s)	615, 1041, 1053, 1356, 1406
ScrFI	CCNGG	3 cut(s)	1367, 1910, 2177
SduI	GDGCHC	6 cut(s)	137, 542, 1017, 1171, 2187, 2253
SfaNI	GCATC	4 cut(s)	571, 1207, 1627, 2262
SfcI	CTRYAG	2 cut(s)	1866, 2244
SfoI	GGCGCC	1 cut(s)	462
SfuI	TTCGAA	2 cut(s)	831, 921
SinI	GGWCC	1 cut(s)	1257
SmiMI	CAYNNNNRTG	5 cut(s)	579, 763, 1368, 1817, 2034
SmlI	CTYRAG	5 cut(s)	678, 752, 1016, 1170, 1414
SmoI	CTYRAG	5 cut(s)	678, 752, 1016, 1170, 1414
SnaBI	TACGTA	1 cut(s)	235
SphI	GCATGC	1 cut(s)	2386
Sse9I	AATT	9 cut(s)	253, 669, 1137, 1419, 1788, 1913, 1963, 2130, 2347
SseBI	AGGCCT	1 cut(s)	1108
SsiI	CCGC	2 cut(s)	1395, 2123
SspDI	GGCGCC	1 cut(s)	460
SspMI	CTAG	7 cut(s)	435, 1073, 1116, 1343, 1874, 1992, 2313
SstI	GAGCTC	1 cut(s)	1017
StuI	AGGCCT	1 cut(s)	1108
StyD4I	CCNGG	3 cut(s)	1365, 1908, 2175
StyI	CCWWGG	1 cut(s)	595
TaaI	ACNGT	6 cut(s)	853, 1333, 1630, 1870, 1930, 2140
TaiI	ACGT	3 cut(s)	237, 636, 669
TaqI	TCGA	5 cut(s)	831, 921, 969, 1082, 2072
TasI	AATT	9 cut(s)	253, 669, 1137, 1419, 1788, 1913, 1963, 2130, 2347
TatI	WGTACW	4 cut(s)	844, 883, 1089, 1725
TfiI	GAWTC	9 cut(s)	334, 742, 1079, 1144, 1177, 1434, 1742, 2172, 2316
Tru1I	TTAA	4 cut(s)	183, 663, 1163, 1541
Tru9I	TTAA	4 cut(s)	183, 663, 1163, 1541
TscAI	CASTG	6 cut(s)	473, 915, 1633, 1853, 2187, 2343
TseFI	GTSAC	3 cut(s)	224, 1844, 2257
TseI	GCWGC	4 cut(s)	584, 818, 1120, 2211
Tsp45I	GTSAC	3 cut(s)	224, 1844, 2257
TspGWI	ACGGA	1 cut(s)	1958
TspRI	CASTG	6 cut(s)	473, 915, 1633, 1853, 2187, 2343
VpaK11BI	GGWCC	1 cut(s)	1257
XagI	CCTNNNNNAGG	1 cut(s)	213
XapI	RAATTY	2 cut(s)	1963, 2130
XbaI	TCTAGA	1 cut(s)	1072
XceI	RCATGY	4 cut(s)	1732, 1753, 1945, 2386
XmnI	GAANNNNTTC	2 cut(s)	1792, 2025
XspI	CTAG	7 cut(s)	435, 1073, 1116, 1343, 1874, 1992, 2313
Zsp2I	ATGCAT	1 cut(s)	1611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.