Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0011643

Physical Location & Seq

Genomic Coordinates Forward (+)

5831743 .. 5834572

Gene Structure 2830 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1056400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2388 bp

ATGAAGTCACAAGCAGCACCTAACCAAGAAGACTACAAGTTGAAGGACACAAAGCCCCGGCTTGGGGAACGATGGCCACATGGAGGAGTTCGCGGCGGAGGTGGGTGGATAAGCAGCGAAAGAGCTACGAGCACTTATGACCTTGTTGAGCAGATGTTTTATCTATATGTCAGAGTTGAAAAAGCCAAGGATCTTCCGACAAACCCCGTGACGGGAAGCTGTGACCCCTATATAGAAGTGAAGCTGGGGAATTACAAGGGCAAAACAAAGCACTTTGAGAAGAAAACAAACCCTGAATGGAAGCAAGTATTTGCATTTTCGAAAGAGAAGATTCAGTCTTCGATACTCGAAGTTTATGTCAGGGATAGAGAGATGGTGGCAAGAGATGACAATGTTGGGAAGGTGGTATTTGACATGAATGAGGTGCCGACTAGAGTTCCACCAGATAGCCCTTTGGCACCTCAATGGTACAGATTAGAAGATCGCCGTGGCGATACTAAGGTTAGAGGAGAGGTGATGCTTGCAGTTTGGATGGGTACACAAGCTGATGAAGCTTTCCCAGAAGCATGGCACTCGGATGCTGCTTCAGTTCACGGAGAGGGAGTTTTCAGCATTCGCTCCAAGGTTTATGTCTCGCCGAAGCTGTGGTACCTCAGAGTTAATGTAATTGAAGCTCAGGATGTGGAGCCACATGATCGAAGCCAACTACCGCAAGCTTTCATCAAGGCTCATGTCGGAAATCAAACACTTAAAACAAAGATATCTCCAACCAGGACACCTAATCCCATGTGGAACGAAGATTTGATCTTTGTAGCAGCTGAGCCTTTTGAAGAACAGCTTGTGCTTACAGTTGAAAATAAAGTGAGTGCCGCAAAAGATGAACAGGTGGGAAAAATAAGCCTGCCGCTGACAATCTTTGAGAGGCGGTTGGATCACAGGCCAGTCCATTCTCATTGGTTCAACCTTGAAAAATTTGGTTTTGGTGCGTTGGAGGGAGACAAGAGACATGAGCTCAAGTTTTCGACCAGGGTCCATCTCAGAGTCTGTCTTGAGGGTGCTTACCATGTACTAGATGAATCGACCTTGTACATAAGCGACGTGAGGCCTACTGCCAGGCAGCTATGGAAGCAGCCAATTGGGATTCTTGAAGTAGGTATCTTAAGTGCCCAAGGGCTTCTTCCGATGAAGAACAAGGATGGCAAAGCAACAACAGATGCTTACTGCATAGCCAAGTACGGGCAGAAATGGGTGAGGACCAGAACAATCATCGAAAGCTTCAGTCCCAAGTGGAATGAACAATATACATGGGAGGTCTACGACCCTTGCACGGTGATCACACTGGGAGTTTTCGACAACTGCCACCTCGGTGTGAATGAGAAACCGATTTCTGGCAGCGGAGCTAAAAATGACTCAAGAATTGGCAAGGTAAGAATTCGGTTATCAACCCTGGAAATGGATCGAATTTATACAAACTCCTATCCGCTTCTAGTCCTACAACCATCCGGATTGAAAAAGATGGGGGAGCTCCAATTAGCAGTAAGATTTACCTGTCTCTCACTTACTAATATGATTTACCTCTATGGCCACCCCTTGCTGCCAAAAATGCATTATCTTCATCCATTCACTGTAAATCAGCTAGATAGTTTGAGATATCAGGCAATGAACATTGTAGCCGTGAGACTTGGAAGAGCTGAACCGCCGCTGAGGAAAGAGGTTGTCGAGTACATGCTAGATGTAGACTCCCACATGTGGAGCATGAGAAGAAGCAAAGCTAACTTCTTCAGGATTGTCTCTCTCTTCTCGGGTCTAATCTCCATGAGCAGGTGGCTAGGTGAAGTTCGTCAGTGGAAAAACCCGGTCACTACTGTTTTAGTCCATTTCCTGTTTTTCCTACTGATCTGCTACCCTGAATTGATCCTGCCAACTACATTTCTCTACATGTTTCTCGTTGGACTATGGAATTTCCGCTTCCGTCCAAGGCATCCGCCTCACATGGACACTAAACTCTCATGGGCAGAGGCAGTTCACCCGGATGAAATGGATGAAGAATTTGACACCTTCCCTACGTCTAAGTCACAAGATGTGGTGCGAATGAGGTATGACAGACTGCGCAGTGTGGCAGGAAGAATTCAGACGGTGGCTGGAGACATTGCAACACAGGGGGAGAGATTCCAGGCTGTGCTCAGCTGGAGAGACCCGAGGGCAAGCAGCTTGTTCGTTTTTTTGTGTCTAATTGCCGCTGTGGTGCTCTACGTGACACCATTCAAGATGATTGCTCTGGCTACAGGCATTGTTTGGCTAAGGCATCCTAGATTCCGAAGCAAGCTACCTTCGGTCCCAAGCAATTTCTTCAGAAGACTGCCATCTTGCGCCGATAGCATGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009314 GO:0009416 GO:0009506 GO:0009510 GO:0009511 GO:0009628 GO:0009648 GO:0009791 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0022414 GO:0023052 GO:0030054 GO:0031224 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0033036 GO:0034613 GO:0035556 GO:0042886 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0045184 GO:0046872 GO:0048518 GO:0048571 GO:0048573 GO:0048574 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051179 GO:0051234 GO:0051239 GO:0051240 GO:0051641 GO:0051716 GO:0055044 GO:0061458 GO:0065007 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0071944 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

796

Amino Acids

91.46

Weight (kDa)

9.21

Isoelectric Point (pI)

43.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	54 - 159	6.8e-20	C2 domain
C2	PF00168	216 - 322	5.2e-18	C2 domain
C2	PF00168	380 - 495	4.7e-19	C2 domain
PRT_C	PF08372	640 - 795	1.2e-78	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011643)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06850
fragaria_vesca	FvH4_6g22780 FvH4_6g22780
malus_domestica	MD12G1062100.v1.1 MD14G1056400.v1.1
prunus_persica	Prupe.7G072800_v2.0.a1
pyrus_communis	pycom12g05490 pycom14g04620
rosa_chinensis	RchiOBHm_Chr3g0480381
rosa_laevigata	RLG00000023487
rosa_multiflora	Rmu_sc0002205.1_g000002 Rmu_sc0003742.1_g000015
rosa_roxburghii	Rroxscaffold_6G00401430
rosa_rugosa	Rorug03G0183500
rosa_samantha	Rh3AG235000 Rh3BG267500 Rh3CG264800 Rh3DG260700
rosa_wichuraiana	Rw3G021090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1812
Acc16I	TGCGCA	1 cut(s)	2111
Acc36I	ACCTGC	1 cut(s)	1812
Acc65I	GGTACC	1 cut(s)	648
AccB1I	GGYRCC	3 cut(s)	424, 457, 648
AccI	GTMKAC	2 cut(s)	1314, 1737
AccII	CGCG	1 cut(s)	93
AccIII	TCCGGA	1 cut(s)	1502
AclWI	GGATC	4 cut(s)	198, 939, 1464, 1909
AcoI	YGGCCR	2 cut(s)	74, 1582
AcsI	RAATTY	6 cut(s)	971, 1431, 1461, 1960, 2048, 2127
AcuI	CTGAAG	4 cut(s)	570, 1261, 1765, 2335
AfaI	GTAC	7 cut(s)	470, 538, 650, 1068, 1088, 1235, 1724
AflII	CTTAAG	1 cut(s)	1159
AflIII	ACRYGT	2 cut(s)	1746, 1938
AjiI	CACGTC	1 cut(s)	1099
AjnI	CCWGG	5 cut(s)	770, 1025, 1112, 1446, 2172
AjuI	GAANNNNNNNTTGG	2 cut(s)	1161, 1193
AleI	CACNNNNGTG	1 cut(s)	1365
Alw21I	GWGCWC	5 cut(s)	134, 1014, 1527, 2184, 2250
Alw26I	GTCTC	8 cut(s)	637, 990, 997, 1556, 1672, 1795, 2139, 2187
AlwI	GGATC	4 cut(s)	198, 939, 1464, 1909
AlwNI	CAGNNNCTG	1 cut(s)	1044
Ama87I	CYCGRG	2 cut(s)	1801, 2197
Aor13HI	TCCGGA	1 cut(s)	1502
AoxI	GGCC	4 cut(s)	74, 938, 1103, 1582
ApeKI	GCWGC	9 cut(s)	14, 114, 581, 815, 1117, 1129, 1392, 1594, 2208
ApoI	RAATTY	6 cut(s)	971, 1431, 1461, 1960, 2048, 2127
ArsI	GACNNNNNNTTYG	2 cut(s)	342, 374
Asp718I	GGTACC	1 cut(s)	648
AspLEI	GCGC	2 cut(s)	2112, 2372
AspS9I	GGNCC	3 cut(s)	1030, 1254, 2335
AsuC2I	CCSGG	3 cut(s)	58, 1856, 2030
AsuHPI	GGTGA	5 cut(s)	526, 1261, 1342, 1844, 2018
AsuII	TTCGAA	1 cut(s)	320
AvaI	CYCGRG	2 cut(s)	1801, 2197
AvaII	GGWCC	3 cut(s)	1030, 1254, 2335
BaeGI	GKGCMC	1 cut(s)	1168
BaeI	ACNNNNGTAYC	2 cut(s)	486, 519
BalI	TGGCCA	2 cut(s)	76, 1584
BanI	GGYRCC	3 cut(s)	424, 457, 648
BanII	GRGCYC	2 cut(s)	1014, 1527
BarI	GAAGNNNNNNTAC	2 cut(s)	632, 664
BbsI	GAAGAC	3 cut(s)	36, 330, 2362
Bbv12I	GWGCWC	5 cut(s)	134, 1014, 1527, 2184, 2250
BbvCI	CCTCAGC	1 cut(s)	1703
BbvI	GCAGC	9 cut(s)	26, 126, 568, 827, 1129, 1141, 1404, 1581, 2220
BccI	CCATC	8 cut(s)	66, 367, 526, 1041, 1190, 1507, 1510, 2371
BceAI	ACGGC	2 cut(s)	471, 1658
BcgI	CGANNNNNNTGC	4 cut(s)	555, 589, 2197, 2231
BciT130I	CCWGG	5 cut(s)	772, 1027, 1114, 1448, 2174
BclI	TGATCA	1 cut(s)	1332
BcnI	CCSGG	3 cut(s)	58, 1856, 2030
BcoDI	GTCTC	8 cut(s)	637, 990, 997, 1556, 1672, 1795, 2139, 2187
BfaI	CTAG	7 cut(s)	432, 1070, 1487, 1637, 1730, 1829, 2310
BfmI	CTRYAG	1 cut(s)	2283
BfrI	CTTAAG	1 cut(s)	1159
BfuAI	ACCTGC	1 cut(s)	1812
BlpI	GCTNAGC	2 cut(s)	819, 2183
Bme1390I	CCNGG	8 cut(s)	58, 772, 1027, 1114, 1448, 1856, 2030, 2174
Bme18I	GGWCC	3 cut(s)	1030, 1254, 2335
BmeT110I	CYCGRG	2 cut(s)	1801, 2197
BmgBI	CACGTC	1 cut(s)	1099
BmgT120I	GGNCC	3 cut(s)	1030, 1254, 2335
BmiI	GGNNCC	6 cut(s)	426, 459, 650, 687, 1031, 2337
BmrFI	CCNGG	8 cut(s)	58, 772, 1027, 1114, 1448, 1856, 2030, 2174
BmrI	ACTGGG	1 cut(s)	1349
BmsI	GCATC	5 cut(s)	507, 568, 1204, 1990, 2314
BmuI	ACTGGG	1 cut(s)	1349
BoxI	GACNNNNGTC	1 cut(s)	1028
BpiI	GAAGAC	3 cut(s)	36, 330, 2362
BpmI	CTGGAG	2 cut(s)	2163, 2209
Bpu10I	CCTNAGC	3 cut(s)	675, 1703, 2300
Bpu1102I	GCTNAGC	2 cut(s)	819, 2183
Bpu14I	TTCGAA	1 cut(s)	320
BpuEI	CTTGAG	3 cut(s)	998, 1070, 1396
BpuMI	CCSGG	3 cut(s)	58, 1856, 2030
BsaAI	YACGTR	1 cut(s)	2254
BsaI	GGTCTC	1 cut(s)	2187
BsaWI	WCCGGW	1 cut(s)	1502
BsaXI	ACNNNNNCTCC	2 cut(s)	588, 618
Bse1I	ACTGG	2 cut(s)	941, 1344
Bse3DI	GCAATG	2 cut(s)	1665, 2148
BseAI	TCCGGA	1 cut(s)	1502
BseBI	CCWGG	5 cut(s)	772, 1027, 1114, 1448, 2174
BseMI	GCAATG	2 cut(s)	1665, 2148
BseMII	CTCAG	6 cut(s)	667, 689, 810, 1051, 1694, 2197
BseNI	ACTGG	2 cut(s)	941, 1344
BseRI	GAGGAG	2 cut(s)	99, 522
BseSI	GKGCMC	1 cut(s)	1168
BseXI	GCAGC	9 cut(s)	26, 126, 568, 827, 1129, 1141, 1404, 1581, 2220
BseYI	CCCAGC	1 cut(s)	244
Bsh1236I	CGCG	1 cut(s)	93
BshFI	GGCC	4 cut(s)	76, 940, 1105, 1584
BshNI	GGYRCC	3 cut(s)	424, 457, 648
BsiHKAI	GWGCWC	5 cut(s)	134, 1014, 1527, 2184, 2250
BsiHKCI	CYCGRG	2 cut(s)	1801, 2197
BsiSI	CCGG	4 cut(s)	58, 1503, 1856, 2030
BslFI	GGGAC	2 cut(s)	1266, 2321
BsmAI	GTCTC	8 cut(s)	637, 990, 997, 1556, 1672, 1795, 2139, 2187
BsmFI	GGGAC	2 cut(s)	1266, 2321
BsmI	GAATGC	1 cut(s)	612
BsnI	GGCC	4 cut(s)	76, 940, 1105, 1584
Bso31I	GGTCTC	1 cut(s)	2187
BsoBI	CYCGRG	2 cut(s)	1801, 2197
Bsp119I	TTCGAA	1 cut(s)	320
Bsp1286I	GDGCHC	6 cut(s)	134, 1014, 1168, 1527, 2184, 2250
Bsp13I	TCCGGA	1 cut(s)	1502
Bsp1407I	TGTACA	1 cut(s)	1086
Bsp143I	GATC	9 cut(s)	190, 481, 694, 804, 931, 1332, 1456, 1896, 1914
Bsp1720I	GCTNAGC	2 cut(s)	819, 2183
BspANI	GGCC	4 cut(s)	76, 940, 1105, 1584
BspCNI	CTCAG	6 cut(s)	666, 688, 811, 1050, 1695, 2196
BspEI	TCCGGA	1 cut(s)	1502
BspFNI	CGCG	1 cut(s)	93
BspLI	GGNNCC	6 cut(s)	426, 459, 650, 687, 1031, 2337
BspMI	ACCTGC	1 cut(s)	1812
BspPI	GGATC	4 cut(s)	198, 939, 1464, 1909
BspQI	GCTCTTC	1 cut(s)	1681
BspT104I	TTCGAA	1 cut(s)	320
BspT107I	GGYRCC	3 cut(s)	424, 457, 648
BspTI	CTTAAG	1 cut(s)	1159
BspTNI	GGTCTC	1 cut(s)	2187
BsrDI	GCAATG	2 cut(s)	1665, 2148
BsrGI	TGTACA	1 cut(s)	1086
BsrI	ACTGG	2 cut(s)	941, 1344
BssMI	GATC	9 cut(s)	190, 481, 694, 804, 931, 1332, 1456, 1896, 1914
BssT1I	CCWWGG	4 cut(s)	186, 621, 1168, 1976
Bst2UI	CCWGG	5 cut(s)	772, 1027, 1114, 1448, 2174
Bst4CI	ACNGT	5 cut(s)	850, 1330, 1627, 1867, 2137
Bst6I	CTCTTC	2 cut(s)	1681, 1802
BstAFI	CTTAAG	1 cut(s)	1159
BstAUI	TGTACA	1 cut(s)	1086
BstBAI	YACGTR	1 cut(s)	2254
BstBI	TTCGAA	1 cut(s)	320
BstC8I	GCNNGC	6 cut(s)	522, 714, 902, 2206, 2324, 2381
BstDEI	CTNAG	9 cut(s)	498, 653, 675, 819, 1037, 1703, 2070, 2183, 2300
BstDSI	CCRYGG	1 cut(s)	487
BstFNI	CGCG	1 cut(s)	93
BstHHI	GCGC	2 cut(s)	2112, 2372
BstKTI	GATC	9 cut(s)	193, 484, 697, 807, 934, 1335, 1459, 1899, 1917
BstMAI	GTCTC	8 cut(s)	637, 990, 997, 1556, 1672, 1795, 2139, 2187
BstMBI	GATC	9 cut(s)	190, 481, 694, 804, 931, 1332, 1456, 1896, 1914
BstMWI	GCNNNNNNNGC	4 cut(s)	551, 1126, 1603, 2376
BstNI	CCWGG	5 cut(s)	772, 1027, 1114, 1448, 2174
BstNSI	RCATGY	4 cut(s)	1729, 1750, 1942, 2383
BstPAI	GACNNNNGTC	1 cut(s)	1028
BstSCI	CCNGG	8 cut(s)	56, 770, 1025, 1112, 1446, 1854, 2028, 2172
BstSFI	CTRYAG	1 cut(s)	2283
BstSLI	GKGCMC	1 cut(s)	1168
BstUI	CGCG	1 cut(s)	93
BstV1I	GCAGC	9 cut(s)	26, 126, 568, 827, 1129, 1141, 1404, 1581, 2220
BstV2I	GAAGAC	3 cut(s)	36, 330, 2362
BstX2I	RGATCY	1 cut(s)	190
BstXI	CCANNNNNNTGG	1 cut(s)	567
BstYI	RGATCY	1 cut(s)	190
BsuRI	GGCC	4 cut(s)	76, 940, 1105, 1584
BtgI	CCRYGG	1 cut(s)	487
BtrI	CACGTC	1 cut(s)	1099
BtsI	GCAGTG	1 cut(s)	2119
BtsIMutI	CAGTG	4 cut(s)	1337, 1623, 1850, 2119
BveI	ACCTGC	1 cut(s)	1812
Cac8I	GCNNGC	6 cut(s)	522, 714, 902, 2206, 2324, 2381
CaiI	CAGNNNCTG	1 cut(s)	1044
CfoI	GCGC	2 cut(s)	2112, 2372
Cfr13I	GGNCC	3 cut(s)	1030, 1254, 2335
Csp6I	GTAC	7 cut(s)	469, 537, 649, 1067, 1087, 1234, 1723
CviQI	GTAC	7 cut(s)	469, 537, 649, 1067, 1087, 1234, 1723
DdeI	CTNAG	9 cut(s)	498, 653, 675, 819, 1037, 1703, 2070, 2183, 2300
DpnI	GATC	9 cut(s)	192, 483, 696, 806, 933, 1334, 1458, 1898, 1916
DpnII	GATC	9 cut(s)	190, 481, 694, 804, 931, 1332, 1456, 1896, 1914
EaeI	YGGCCR	2 cut(s)	74, 1582
Eam1104I	CTCTTC	2 cut(s)	1681, 1802
EarI	CTCTTC	2 cut(s)	1681, 1802
EciI	GGCGGA	2 cut(s)	111, 1974
Ecl136II	GAGCTC	2 cut(s)	1012, 1525
Eco130I	CCWWGG	4 cut(s)	186, 621, 1168, 1976
Eco147I	AGGCCT	1 cut(s)	1105
Eco24I	GRGCYC	2 cut(s)	1014, 1527
Eco31I	GGTCTC	1 cut(s)	2187
Eco32I	GATATC	2 cut(s)	762, 1652
Eco47I	GGWCC	3 cut(s)	1030, 1254, 2335
Eco53kI	GAGCTC	2 cut(s)	1012, 1525
Eco57I	CTGAAG	4 cut(s)	570, 1261, 1765, 2335
Eco88I	CYCGRG	2 cut(s)	1801, 2197
EcoICRI	GAGCTC	2 cut(s)	1012, 1525
EcoRI	GAATTC	2 cut(s)	1431, 2127
EcoRII	CCWGG	5 cut(s)	770, 1025, 1112, 1446, 2172
EcoRV	GATATC	2 cut(s)	762, 1652
EcoT14I	CCWWGG	4 cut(s)	186, 621, 1168, 1976
EcoT22I	ATGCAT	1 cut(s)	1608
EcoT38I	GRGCYC	2 cut(s)	1014, 1527
ErhI	CCWWGG	4 cut(s)	186, 621, 1168, 1976
FalI	AAGNNNNNCTT	4 cut(s)	822, 854, 1161, 1193
FaqI	GGGAC	2 cut(s)	1266, 2321
FbaI	TGATCA	1 cut(s)	1332
FblI	GTMKAC	2 cut(s)	1314, 1737
FriOI	GRGCYC	2 cut(s)	1014, 1527
FspBI	CTAG	7 cut(s)	432, 1070, 1487, 1637, 1730, 1829, 2310
FspI	TGCGCA	1 cut(s)	2111
GlaI	GCGC	2 cut(s)	2111, 2371
GsaI	CCCAGC	1 cut(s)	248
GsuI	CTGGAG	2 cut(s)	2163, 2209
HaeIII	GGCC	4 cut(s)	76, 940, 1105, 1584
HapII	CCGG	4 cut(s)	58, 1503, 1856, 2030
HhaI	GCGC	2 cut(s)	2112, 2372
Hin6I	GCGC	2 cut(s)	2110, 2370
HinP1I	GCGC	2 cut(s)	2110, 2370
HindIII	AAGCTT	3 cut(s)	552, 714, 1273
HinfI	GANTC	8 cut(s)	331, 1041, 1076, 1141, 1409, 1739, 2169, 2313
HpaII	CCGG	4 cut(s)	58, 1503, 1856, 2030
HphI	GGTGA	5 cut(s)	526, 1261, 1342, 1844, 2018
Hpy166II	GTNNAC	5 cut(s)	539, 592, 1315, 1738, 2026
Hpy188III	TCNNGA	7 cut(s)	677, 1049, 1145, 1413, 1503, 1783, 2266
Hpy8I	GTNNAC	5 cut(s)	539, 592, 1315, 1738, 2026
Hpy99I	CGWCG	1 cut(s)	1100
HpyAV	CCTTC	4 cut(s)	37, 394, 2068, 2340
HpyCH4III	ACNGT	5 cut(s)	850, 1330, 1627, 1867, 2137
HpyCH4IV	ACGT	3 cut(s)	1098, 2066, 2253
HpyCH4V	TGCA	6 cut(s)	314, 524, 1224, 1326, 1606, 2153
HpyF10VI	GCNNNNNNNGC	4 cut(s)	551, 1126, 1603, 2376
HpyF3I	CTNAG	9 cut(s)	498, 653, 675, 819, 1037, 1703, 2070, 2183, 2300
HpySE526I	ACGT	3 cut(s)	1098, 2066, 2253
HspAI	GCGC	2 cut(s)	2110, 2370
Kpn2I	TCCGGA	1 cut(s)	1502
KpnI	GGTACC	1 cut(s)	652
Ksp22I	TGATCA	1 cut(s)	1332
Kzo9I	GATC	9 cut(s)	190, 481, 694, 804, 931, 1332, 1456, 1896, 1914
LguI	GCTCTTC	1 cut(s)	1681
LmnI	GCTCC	6 cut(s)	623, 685, 1397, 1522, 1530, 1752
Lsp1109I	GCAGC	9 cut(s)	26, 126, 568, 827, 1129, 1141, 1404, 1581, 2220
LweI	GCATC	5 cut(s)	507, 568, 1204, 1990, 2314
MaeI	CTAG	7 cut(s)	432, 1070, 1487, 1637, 1730, 1829, 2310
MaeII	ACGT	3 cut(s)	1098, 2066, 2253
MaeIII	GTNAC	6 cut(s)	6, 208, 221, 1858, 2073, 2254
MalI	GATC	9 cut(s)	192, 483, 696, 806, 933, 1334, 1458, 1898, 1916
MboI	GATC	9 cut(s)	190, 481, 694, 804, 931, 1332, 1456, 1896, 1914
MfeI	CAATTG	1 cut(s)	1134
MflI	RGATCY	1 cut(s)	190
MhlI	GDGCHC	6 cut(s)	134, 1014, 1168, 1527, 2184, 2250
MlsI	TGGCCA	2 cut(s)	76, 1584
MluNI	TGGCCA	2 cut(s)	76, 1584
MlyI	GAGTC	3 cut(s)	1050, 1403, 1733
MmeI	TCCRAC	6 cut(s)	221, 715, 791, 909, 969, 1930
Mox20I	TGGCCA	2 cut(s)	76, 1584
Mph1103I	ATGCAT	1 cut(s)	1608
MroI	TCCGGA	1 cut(s)	1502
MscI	TGGCCA	2 cut(s)	76, 1584
MseI	TTAA	3 cut(s)	660, 750, 1160
MslI	CAYNNNNRTG	4 cut(s)	463, 576, 1365, 2031
Msp20I	TGGCCA	2 cut(s)	76, 1584
MspA1I	CMGCKG	6 cut(s)	818, 907, 1395, 1702, 2187, 2240
MspCI	CTTAAG	1 cut(s)	1159
MspI	CCGG	4 cut(s)	58, 1503, 1856, 2030
MspR9I	CCNGG	8 cut(s)	58, 772, 1027, 1114, 1448, 1856, 2030, 2174
MunI	CAATTG	1 cut(s)	1134
Mva1269I	GAATGC	1 cut(s)	612
MvaI	CCWGG	5 cut(s)	772, 1027, 1114, 1448, 2174
MvnI	CGCG	1 cut(s)	93
MwoI	GCNNNNNNNGC	4 cut(s)	551, 1126, 1603, 2376
NciI	CCSGG	3 cut(s)	58, 1856, 2030
NdeII	GATC	9 cut(s)	190, 481, 694, 804, 931, 1332, 1456, 1896, 1914
NlaIV	GGNNCC	6 cut(s)	426, 459, 650, 687, 1031, 2337
NmuCI	GTSAC	6 cut(s)	6, 208, 221, 1858, 2073, 2254
NsbI	TGCGCA	1 cut(s)	2111
NsiI	ATGCAT	1 cut(s)	1608
NspI	RCATGY	4 cut(s)	1729, 1750, 1942, 2383
NspV	TTCGAA	1 cut(s)	320
OliI	CACNNNNGTG	1 cut(s)	1365
PaeI	GCATGC	1 cut(s)	2383
PaqCI	CACCTGC	1 cut(s)	1812
PceI	AGGCCT	1 cut(s)	1105
PciI	ACATGT	2 cut(s)	1746, 1938
PciSI	GCTCTTC	1 cut(s)	1681
PctI	GAATGC	1 cut(s)	612
PfeI	GAWTC	5 cut(s)	331, 1076, 1141, 2169, 2313
PleI	GAGTC	3 cut(s)	1049, 1403, 1733
PpsI	GAGTC	3 cut(s)	1049, 1403, 1733
Ppu21I	YACGTR	1 cut(s)	2254
PscI	ACATGT	2 cut(s)	1746, 1938
PshAI	GACNNNNGTC	1 cut(s)	1028
Psp124BI	GAGCTC	2 cut(s)	1014, 1527
Psp6I	CCWGG	5 cut(s)	770, 1025, 1112, 1446, 2172
PspFI	CCCAGC	1 cut(s)	244
PspGI	CCWGG	5 cut(s)	770, 1025, 1112, 1446, 2172
PspN4I	GGNNCC	6 cut(s)	426, 459, 650, 687, 1031, 2337
PspPI	GGNCC	3 cut(s)	1030, 1254, 2335
PstNI	CAGNNNCTG	1 cut(s)	1044
PsuI	RGATCY	1 cut(s)	190
PvuII	CAGCTG	2 cut(s)	818, 2187
RsaI	GTAC	7 cut(s)	470, 538, 650, 1068, 1088, 1235, 1724
RsaNI	GTAC	7 cut(s)	469, 537, 649, 1067, 1087, 1234, 1723
RseI	CAYNNNNRTG	4 cut(s)	463, 576, 1365, 2031
SacI	GAGCTC	2 cut(s)	1014, 1527
SapI	GCTCTTC	1 cut(s)	1681
SaqAI	TTAA	3 cut(s)	660, 750, 1160
Sau3AI	GATC	9 cut(s)	190, 481, 694, 804, 931, 1332, 1456, 1896, 1914
Sau96I	GGNCC	3 cut(s)	1030, 1254, 2335
SchI	GAGTC	3 cut(s)	1050, 1403, 1733
ScrFI	CCNGG	8 cut(s)	58, 772, 1027, 1114, 1448, 1856, 2030, 2174
SduI	GDGCHC	6 cut(s)	134, 1014, 1168, 1527, 2184, 2250
SfaNI	GCATC	5 cut(s)	507, 568, 1204, 1990, 2314
SfcI	CTRYAG	1 cut(s)	2283
SfuI	TTCGAA	1 cut(s)	320
SinI	GGWCC	3 cut(s)	1030, 1254, 2335
SmiMI	CAYNNNNRTG	4 cut(s)	463, 576, 1365, 2031
SmlI	CTYRAG	4 cut(s)	1013, 1049, 1159, 1411
SmoI	CTYRAG	4 cut(s)	1013, 1049, 1159, 1411
SphI	GCATGC	1 cut(s)	2383
SseBI	AGGCCT	1 cut(s)	1105
SspMI	CTAG	7 cut(s)	432, 1070, 1487, 1637, 1730, 1829, 2310
SstI	GAGCTC	2 cut(s)	1014, 1527
StuI	AGGCCT	1 cut(s)	1105
StyD4I	CCNGG	8 cut(s)	56, 770, 1025, 1112, 1446, 1854, 2028, 2172
StyI	CCWWGG	4 cut(s)	186, 621, 1168, 1976
TaaI	ACNGT	5 cut(s)	850, 1330, 1627, 1867, 2137
TaiI	ACGT	3 cut(s)	1101, 2069, 2256
TaqII	GACCGA	1 cut(s)	2323
TatI	WGTACW	3 cut(s)	1066, 1086, 1722
TauI	GCSGC	5 cut(s)	96, 872, 907, 1702, 2240
TfiI	GAWTC	5 cut(s)	331, 1076, 1141, 2169, 2313
Tru1I	TTAA	3 cut(s)	660, 750, 1160
Tru9I	TTAA	3 cut(s)	660, 750, 1160
TscAI	CASTG	4 cut(s)	1344, 1630, 1850, 2119
TseFI	GTSAC	6 cut(s)	6, 208, 221, 1858, 2073, 2254
TseI	GCWGC	9 cut(s)	14, 114, 581, 815, 1117, 1129, 1392, 1594, 2208
Tsp45I	GTSAC	6 cut(s)	6, 208, 221, 1858, 2073, 2254
TspGWI	ACGGA	2 cut(s)	609, 1961
TspRI	CASTG	4 cut(s)	1344, 1630, 1850, 2119
Vha464I	CTTAAG	1 cut(s)	1159
VpaK11BI	GGWCC	3 cut(s)	1030, 1254, 2335
XapI	RAATTY	6 cut(s)	971, 1431, 1461, 1960, 2048, 2127
XceI	RCATGY	4 cut(s)	1729, 1750, 1942, 2383
XmiI	GTMKAC	2 cut(s)	1314, 1737
XspI	CTAG	7 cut(s)	432, 1070, 1487, 1637, 1730, 1829, 2310
Zsp2I	ATGCAT	1 cut(s)	1608

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.